메뉴 건너뛰기




Volumn 36, Issue 1, 2015, Pages 25-64

From discovery to function: The expanding roles of long noncoding RNAs in physiology and disease

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; HISTONE; LONG UNTRANSLATED RNA; STEROID RECEPTOR; HOTAIR LONG UNTRANSLATED RNA, HUMAN; MALAT1 LONG NON-CODING RNA, HUMAN; MESSENGER RNA; TRANSCRIPTOME; UNTRANSLATED RNA; XIST NON-CODING RNA;

EID: 84961291622     PISSN: None     EISSN: 0163769X     Source Type: Journal    
DOI: 10.1210/er.2014-1034     Document Type: Review
Times cited : (364)

References (336)
  • 1
    • 0142104045 scopus 로고    scopus 로고
    • Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
    • Okazaki Y, Furuno M, Kasukawa T, et al. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420(6915):563-573.
    • (2002) Nature. , vol.420 , Issue.6915 , pp. 563-573
    • Okazaki, Y.1    Furuno, M.2    Kasukawa, T.3
  • 2
    • 34250305146 scopus 로고    scopus 로고
    • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
    • ENCODE Project Consortium
    • ENCODE Project Consortium; Birney E, Stamatoyannopoulos JA, Dutta A, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature. 2007;447(7146):799-816.
    • (2007) Nature. , vol.447 , Issue.7146 , pp. 799-816
    • Birney, E.1    Stamatoyannopoulos, J.A.2    Dutta, A.3
  • 3
    • 84865757142 scopus 로고    scopus 로고
    • Landscape of transcription in human cells
    • Djebali S, Davis CA, Merkel A, et al. Landscape of transcription in human cells. Nature. 2012;489(7414):101-108.
    • (2012) Nature. , vol.489 , Issue.7414 , pp. 101-108
    • Djebali, S.1    Davis, C.A.2    Merkel, A.3
  • 4
    • 60349120914 scopus 로고    scopus 로고
    • Long non-coding RNAs: insights into functions
    • Mercer TR, Dinger ME, Mattick JS. Long non-coding RNAs: insights into functions. Nat Rev Genet. 2009;10(3): 155-159.
    • (2009) Nat Rev Genet. , vol.10 , Issue.3 , pp. 155-159
    • Mercer, T.R.1    Dinger, M.E.2    Mattick, J.S.3
  • 5
    • 84864927713 scopus 로고    scopus 로고
    • Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs
    • MoranVA,Perera RJ, KhalilAM.Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs. Nucleic Acids Res. 2012;40(14):6391-6400.
    • (2012) Nucleic Acids Res , vol.40 , Issue.14 , pp. 6391-6400
    • Moran, V.A.1    Perera, R.J.2    Khalil, A.M.3
  • 6
    • 77957243921 scopus 로고    scopus 로고
    • Long noncoding RNAs with enhancer-like function in human cells
    • Ørom UA, Derrien T, Beringer M, et al. Long noncoding RNAs with enhancer-like function in human cells. Cell. 2010;143(1):46-58.
    • (2010) Cell. , vol.143 , Issue.1 , pp. 46-58
    • Ørom, U.A.1    Derrien, T.2    Beringer, M.3
  • 7
    • 67649671961 scopus 로고    scopus 로고
    • Long noncoding RNAs: functional surprises from the RNA world
    • Wilusz JE, Sunwoo H, Spector DL. Long noncoding RNAs: functional surprises from the RNA world. Genes Dev. 2009;23(13):1494-1504.
    • (2009) Genes Dev. , vol.23 , Issue.13 , pp. 1494-1504
    • Wilusz, J.E.1    Sunwoo, H.2    Spector, D.L.3
  • 8
    • 84861904178 scopus 로고    scopus 로고
    • Genomeregulation by long noncoding RNAs
    • Rinn JL,ChangHY.Genomeregulation by long noncoding RNAs. Annu Rev Biochem. 2012;81:145-166.
    • (2012) Annu Rev Biochem , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 9
    • 84879987789 scopus 로고    scopus 로고
    • lincRNAs: genomics, evolution, and mechanisms
    • Ulitsky I, Bartel DP. lincRNAs: genomics, evolution, and mechanisms. Cell. 2013;154(1):26-46.
    • (2013) Cell. , vol.154 , Issue.1 , pp. 26-46
    • Ulitsky, I.1    Bartel, D.P.2
  • 10
    • 84875200257 scopus 로고    scopus 로고
    • Long noncoding RNAs: cellular address codes in development and disease
    • Batista PJ, Chang HY. Long noncoding RNAs: cellular address codes in development and disease. Cell. 2013; 152(6):1298-1307.
    • (2013) Cell. , vol.152 , Issue.6 , pp. 1298-1307
    • Batista, P.J.1    Chang, H.Y.2
  • 11
    • 84898008747 scopus 로고    scopus 로고
    • SAL-RNAs: senescence-associated long non-coding RNAs
    • Abdelmohsen K, Panda A, Kang MJ, et al. SAL-RNAs: senescence-associated long non-coding RNAs. Aging Cell. 2013.
    • (2013) Aging Cell
    • Abdelmohsen, K.1    Panda, A.2    Kang, M.J.3
  • 12
    • 84874500772 scopus 로고    scopus 로고
    • Long noncoding RNAs regulate adipogenesis
    • Sun L, Goff LA, Trapnell C, et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci U S A. 2013; 110(9):3387-3392.
    • (2013) Proc Natl Acad Sci U S A. , vol.110 , Issue.9 , pp. 3387-3392
    • Sun, L.1    Goff, L.A.2    Trapnell, C.3
  • 13
    • 84865727393 scopus 로고    scopus 로고
    • TheGENCODEv7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression
    • Derrien T, Johnson R, Bussotti G, et al. TheGENCODEv7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression. Genome Res. 2012;22(9):1775-1789.
    • (2012) Genome Res. , vol.22 , Issue.9 , pp. 1775-1789
    • Derrien, T.1    Johnson, R.2    Bussotti, G.3
  • 14
    • 34250160256 scopus 로고    scopus 로고
    • RNA maps reveal new RNA classes and a possible function for pervasive transcription
    • Kapranov P, Cheng J, Dike S, et al. RNA maps reveal new RNA classes and a possible function for pervasive transcription. Science. 2007;316(5830):1484-1488.
    • (2007) Science. , vol.316 , Issue.5830 , pp. 1484-1488
    • Kapranov, P.1    Cheng, J.2    Dike, S.3
  • 15
    • 84894532371 scopus 로고    scopus 로고
    • On the classification of long non-coding RNAs
    • Ma L, Bajic VB, Zhang Z. On the classification of long non-coding RNAs. RNA Biol. 2013;10(6);925-933.
    • (2013) RNA Biol , vol.10 , Issue.6 , pp. 925-933
    • Ma, L.1    Bajic, V.B.2    Zhang, Z.3
  • 16
    • 84883214592 scopus 로고    scopus 로고
    • Sizing up long non-coding RNAs: Do lncRNAs have secondary and tertiary structure?
    • Novikova IV, Hennelly SP, Sanbonmatsu KY. Sizing up long non-coding RNAs: Do lncRNAs have secondary and tertiary structure? Bioarchitecture. 2012;2(6):189-199.
    • (2012) Bioarchitecture. , vol.2 , Issue.6 , pp. 189-199
    • Novikova, I.V.1    Hennelly, S.P.2    Sanbonmatsu, K.Y.3
  • 17
    • 82155186923 scopus 로고    scopus 로고
    • The emergence of lncRNAs in cancer biology
    • Prensner JR, Chinnaiyan AM. The emergence of lncRNAs in cancer biology. Cancer Discov. 2011;1(5):391-407.
    • (2011) Cancer Discov. , vol.1 , Issue.5 , pp. 391-407
    • Prensner, J.R.1    Chinnaiyan, A.M.2
  • 18
    • 62249133709 scopus 로고    scopus 로고
    • Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
    • Guttman M, Amit I, Garber M, et al. Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals. Nature. 2009;458(7235):223-227.
    • (2009) Nature. , vol.458 , Issue.7235 , pp. 223-227
    • Guttman, M.1    Amit, I.2    Garber, M.3
  • 19
    • 77952148742 scopus 로고    scopus 로고
    • Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
    • Guttman M, Garber M, Levin JZ, et al. Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs. Nat Biotechnol. 2010;28(5):503-510.
    • (2010) Nat Biotechnol. , vol.28 , Issue.5 , pp. 503-510
    • Guttman, M.1    Garber, M.2    Levin, J.Z.3
  • 20
    • 80052978224 scopus 로고    scopus 로고
    • Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
    • Cabili MN, Trapnell C, Goff L, et al. Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses. GenesDev. 2011; 25(18):1915-1927.
    • (2011) GenesDev. , vol.25 , Issue.18 , pp. 1915-1927
    • Cabili, M.N.1    Trapnell, C.2    Goff, L.3
  • 21
    • 67650921949 scopus 로고    scopus 로고
    • Many human large intergenic noncoding RNAs associate with chromatin- modifying complexes and affect gene expression
    • Khalil AM, Guttman M, Huarte M, et al. Many human large intergenic noncoding RNAs associate with chromatin- modifying complexes and affect gene expression. Proc Natl Acad Sci U S A. 2009;106(28):11667-11672.
    • (2009) Proc Natl Acad Sci U S A. , vol.106 , Issue.28 , pp. 11667-11672
    • Khalil, A.M.1    Guttman, M.2    Huarte, M.3
  • 22
    • 84879671055 scopus 로고    scopus 로고
    • Pervasive transcription of the human genome produces thousands of previously unidentified long intergenic noncoding RNAs
    • Hangauer MJ, Vaughn IW, McManusMT.Pervasive transcription of the human genome produces thousands of previously unidentified long intergenic noncoding RNAs. PLoS Genet. 2013;9(6):e1003569.
    • (2013) PLoS Genet , vol.9 , Issue.6
    • Hangauer, M.J.1    Vaughn, I.W.2    McManus, M.T.3
  • 23
    • 81055155799 scopus 로고    scopus 로고
    • Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes
    • Ingolia NT, Lareau LF, Weissman JS. Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes. Cell. 2011;147(4): 789-802.
    • (2011) Cell. , vol.147 , Issue.4 , pp. 789-802
    • Ingolia, N.T.1    Lareau, L.F.2    Weissman, J.S.3
  • 24
    • 84879969127 scopus 로고    scopus 로고
    • Ribosome Profiling Provides Evidence that Large Noncoding RNAs Do Not Encode Proteins
    • Guttman M, Russell P, Ingolia NT, Weissman JS, Lander ES. Ribosome Profiling Provides Evidence that Large Noncoding RNAs Do Not Encode Proteins. Cell. 2013;154(1): 240-251.
    • (2013) Cell. , vol.154 , Issue.1 , pp. 240-251
    • Guttman, M.1    Russell, P.2    Ingolia, N.T.3    Weissman, J.S.4    Lander, E.S.5
  • 25
    • 0033515637 scopus 로고    scopus 로고
    • A steroid receptor coactivator, SRA, functions as anRNAand is present in an SRC-1 complex
    • Lanz RB, McKenna NJ, Onate SA, et al. A steroid receptor coactivator, SRA, functions as anRNAand is present in an SRC-1 complex. Cell. 1999;97(1):17-27.
    • (1999) Cell. , vol.97 , Issue.1 , pp. 17-27
    • Lanz, R.B.1    McKenna, N.J.2    Onate, S.A.3
  • 26
    • 2442597244 scopus 로고    scopus 로고
    • The steroid receptor RNA activator is the first functional RNA encoding a protein
    • Chooniedass-Kothari S, Emberley E, Hamedani MK, et al. The steroid receptor RNA activator is the first functional RNA encoding a protein. FEBS Lett. 2004;566(1-3):43-47.
    • (2004) FEBS Lett. , vol.566 , Issue.1-3 , pp. 43-47
    • Chooniedass-Kothari, S.1    Emberley, E.2    Hamedani, M.K.3
  • 27
    • 84856625798 scopus 로고    scopus 로고
    • High-resolution view of the yeast meiotic program revealed by ribosome profiling
    • Brar GA, Yassour M, Friedman N, Regev A, Ingolia NT, Weissman JS. High-resolution view of the yeast meiotic program revealed by ribosome profiling. Science. 2012; 335(6068):552-557.
    • (2012) Science. , vol.335 , Issue.6068 , pp. 552-557
    • Brar, G.A.1    Yassour, M.2    Friedman, N.3    Regev, A.4    Ingolia, N.T.5    Weissman, J.S.6
  • 28
    • 84863988094 scopus 로고    scopus 로고
    • Proto-genes and de novo gene birth
    • Carvunis AR, Rolland T, Wapinski I, et al. Proto-genes and de novo gene birth. Nature. 2012;487(7407):370-374.
    • (2012) Nature. , vol.487 , Issue.7407 , pp. 370-374
    • Carvunis, A.R.1    Rolland, T.2    Wapinski, I.3
  • 29
    • 84890856728 scopus 로고    scopus 로고
    • ELABELA: a hormone essential for heart development signals via the apelin receptor
    • Chng SC, Ho L, Tian J, Reversade B. ELABELA: a hormone essential for heart development signals via the apelin receptor. Dev Cell. 2013;27(6):672-680.
    • (2013) Dev Cell. , vol.27 , Issue.6 , pp. 672-680
    • Chng, S.C.1    Ho, L.2    Tian, J.3    Reversade, B.4
  • 30
    • 77954786287 scopus 로고    scopus 로고
    • Small peptides switch the transcriptional activity of Shavenbaby during Drosophila embryogenesis
    • Kondo T, Plaza S, Zanet J, et al. Small peptides switch the transcriptional activity of Shavenbaby during Drosophila embryogenesis. Science. 2010;329(5989):336-339.
    • (2010) Science. , vol.329 , Issue.5989 , pp. 336-339
    • Kondo, T.1    Plaza, S.2    Zanet, J.3
  • 31
    • 84887301772 scopus 로고    scopus 로고
    • De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences
    • Reinhardt JA, WanjiruBM,Brant AT, Saelao P, Begun DJ, Jones CD. De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences. PLoS Genet. 2013;9(10): e1003860.
    • (2013) PLoS Genet. , vol.9 , Issue.10
    • Reinhardt, J.A.1    Wanjiru, B.M.2    Brant, A.T.3    Saelao, P.4    Begun, D.J.5    Jones, C.D.6
  • 32
    • 84891749518 scopus 로고    scopus 로고
    • Toddler: an embryonic signal that promotes cell movement via Apelin receptors
    • Pauli A, Norris ML, Valen E, et al. Toddler: an embryonic signal that promotes cell movement via Apelin receptors. Science. 2014;343(6172):1248636.
    • (2014) Science. , vol.343 , Issue.6172 , pp. 1248636
    • Pauli, A.1    Norris, M.L.2    Valen, E.3
  • 33
    • 84899884309 scopus 로고    scopus 로고
    • Identification of smallORFsin vertebrates using ribosome footprinting and evolutionary conservation
    • Bazzini AA, Johnstone TG, Christiano R, et al. Identification of smallORFsin vertebrates using ribosome footprint ing and evolutionary conservation. EMBO J. 2014;33(9): 981-993.
    • (2014) EMBO J. , vol.33 , Issue.9 , pp. 981-993
    • Bazzini, A.A.1    Johnstone, T.G.2    Christiano, R.3
  • 34
    • 84883487014 scopus 로고    scopus 로고
    • Conserved regulation of cardiac calcium uptake by peptides encoded in small open reading frames
    • Magny EG, Pueyo JI, Pearl FM, et al. Conserved regulation of cardiac calcium uptake by peptides encoded in small open reading frames. Science. 2013;341(6150):1116-1120.
    • (2013) Science. , vol.341 , Issue.6150 , pp. 1116-1120
    • Magny, E.G.1    Pueyo, J.I.2    Pearl, F.M.3
  • 35
    • 79953888460 scopus 로고    scopus 로고
    • The functional role of long non-coding RNA in human carcinomas
    • Gibb EA, Brown CJ, Lam WL. The functional role of long non-coding RNA in human carcinomas. Mol Cancer. 2011;10:38.
    • (2011) Mol Cancer. , vol.10 , pp. 38
    • Gibb, E.A.1    Brown, C.J.2    Lam, W.L.3
  • 36
    • 84874248583 scopus 로고    scopus 로고
    • Divergent transcription of long noncodingRNA/mRNAgene pairs in embryonic stem cells
    • Sigova AA, Mullen AC, Molinie B, et al. Divergent transcription of long noncodingRNA/mRNAgene pairs in embryonic stem cells. Proc Natl Acad Sci USA. 2013;110(8): 2876-2881.
    • (2013) Proc Natl Acad Sci USA. , vol.110 , Issue.8 , pp. 2876-2881
    • Sigova, A.A.1    Mullen, A.C.2    Molinie, B.3
  • 37
    • 84903890453 scopus 로고    scopus 로고
    • Dicer-microRNA-Myc circuit promotes transcription of hundreds of long noncoding RNAs
    • Zheng GX, Do BT, Webster DE, Khavari PA, Chang HY. Dicer-microRNA-Myc circuit promotes transcription of hundreds of long noncoding RNAs. Nat Struct Mol Biol. 2014;21(7):585-590.
    • (2014) Nat Struct Mol Biol. , vol.21 , Issue.7 , pp. 585-590
    • Zheng, G.X.1    Do, B.T.2    Webster, D.E.3    Khavari, P.A.4    Chang, H.Y.5
  • 38
    • 34547515964 scopus 로고    scopus 로고
    • Dendritic BC200 RNA in aging and in Alzheimer's disease
    • Mus E, Hof PR, Tiedge H. Dendritic BC200 RNA in aging and in Alzheimer's disease. Proc Natl Acad Sci USA. 2007; 104(25):10679-10684.
    • (2007) Proc Natl Acad Sci USA. , vol.104 , Issue.25 , pp. 10679-10684
    • Mus, E.1    Hof, P.R.2    Tiedge, H.3
  • 39
    • 79952255050 scopus 로고    scopus 로고
    • Transcriptional regulation of Oct4 by a long non-coding RNA antisense to Oct4-pseudogene
    • Hawkins PG, Morris KV. Transcriptional regulation of Oct4 by a long non-coding RNA antisense to Oct4-pseudogene. Transcription. 2010;1(3):165-175.
    • (2010) Transcription. , vol.1 , Issue.3 , pp. 165-175
    • Hawkins, P.G.1    Morris, K.V.2
  • 40
    • 84875372911 scopus 로고    scopus 로고
    • Natural RNA circles function as efficient microRNA sponges
    • Hansen TB, Jensen TI, Clausen BH, et al. Natural RNA circles function as efficient microRNA sponges. Nature. 2013;495(7441):384-388.
    • (2013) Nature. , vol.495 , Issue.7441 , pp. 384-388
    • Hansen, T.B.1    Jensen, T.I.2    Clausen, B.H.3
  • 41
    • 84872531655 scopus 로고    scopus 로고
    • Circular RNAs are abundant, conserved, and associated with ALU repeats
    • Jeck WR, Sorrentino JA, Wang K, et al. Circular RNAs are abundant, conserved, and associated with ALU repeats. RNA. 2013;19(2):141-157.
    • (2013) RNA. , vol.19 , Issue.2 , pp. 141-157
    • Jeck, W.R.1    Sorrentino, J.A.2    Wang, K.3
  • 42
    • 84875369248 scopus 로고    scopus 로고
    • Circular RNAs are a large class of animal RNAs with regulatory potency
    • Memczak S, Jens M, Elefsinioti A, et al. Circular RNAs are a large class of animal RNAs with regulatory potency. Nature. 2013;495(7441):333-338.
    • (2013) Nature. , vol.495 , Issue.7441 , pp. 333-338
    • Memczak, S.1    Jens, M.2    Elefsinioti, A.3
  • 43
    • 84908093894 scopus 로고    scopus 로고
    • Short intronic repeat sequences facilitate circular RNA production
    • Liang D, Wilusz JE. Short intronic repeat sequences facilitate circular RNA production. Genes Dev. 2014;28(20): 2233-2247.
    • (2014) Genes Dev. , vol.28 , Issue.20 , pp. 2233-2247
    • Liang, D.1    Wilusz, J.E.2
  • 44
    • 84884566546 scopus 로고    scopus 로고
    • Circular intronic long noncoding RNAs
    • Zhang Y, Zhang XO, Chen T, et al. Circular intronic long noncoding RNAs. Mol Cell. 2013;51(6):792-806.
    • (2013) Mol Cell. , vol.51 , Issue.6 , pp. 792-806
    • Zhang, Y.1    Zhang, X.O.2    Chen, T.3
  • 45
    • 84868152631 scopus 로고    scopus 로고
    • Long noncoding RNAs with snoRNA ends
    • Yin QF, Yang L, Zhang Y, et al. Long noncoding RNAs with snoRNA ends. Mol Cell. 2012;48(2):219-230.
    • (2012) Mol Cell. , vol.48 , Issue.2 , pp. 219-230
    • Yin, Q.F.1    Yang, L.2    Zhang, Y.3
  • 46
    • 77955110979 scopus 로고    scopus 로고
    • Genome-wide computational identification and manual annotation of human long noncoding RNA genes
    • Jia H, Osak M, Bogu GK, Stanton LW, Johnson R, Lipovich L. Genome-wide computational identification and manual annotation of human long noncoding RNA genes. RNA. 2010;16(8):1478-1487.
    • (2010) RNA. , vol.16 , Issue.8 , pp. 1478-1487
    • Jia, H.1    Osak, M.2    Bogu, G.K.3    Stanton, L.W.4    Johnson, R.5    Lipovich, L.6
  • 47
    • 33746785696 scopus 로고    scopus 로고
    • Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species
    • Zhang Y, Liu XS, Liu QR, Wei L. Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species. Nucleic Acids Res. 2006; 34(12):3465-3475.
    • (2006) Nucleic Acids Res. , vol.34 , Issue.12 , pp. 3465-3475
    • Zhang, Y.1    Liu, X.S.2    Liu, Q.R.3    Wei, L.4
  • 48
    • 50849129426 scopus 로고    scopus 로고
    • Trans-natural antisense transcripts including noncoding RNAs in 10 species: implications for expression regulation
    • Li JT, Zhang Y, Kong L, Liu QR, Wei L. Trans-natural antisense transcripts including noncoding RNAs in 10 species: implications for expression regulation. Nucleic Acids Res. 2008;36(15):4833-4844.
    • (2008) Nucleic Acids Res. , vol.36 , Issue.15 , pp. 4833-4844
    • Li, J.T.1    Zhang, Y.2    Kong, L.3    Liu, Q.R.4    Wei, L.5
  • 49
    • 84879462680 scopus 로고    scopus 로고
    • Androgenresponsive long noncoding RNA CTBP1-AS promotes prostate cancer
    • TakayamaK, Horie-Inoue K, Katayama S, et al. Androgenresponsive long noncoding RNA CTBP1-AS promotes prostate cancer. EMBO J. 2013;32(12):1665-1680.
    • (2013) EMBO J. , vol.32 , Issue.12 , pp. 1665-1680
    • Takayama, K.1    Horie-Inoue, K.2    Katayama, S.3
  • 51
    • 0025721986 scopus 로고
    • Inhibition of c-erbA mRNA splicing by a naturally occurring antisense RNA
    • Munroe SH, Lazar MA. Inhibition of c-erbA mRNA splicing by a naturally occurring antisense RNA. J Biol Chem. 1991;266(33):22083-22086.
    • (1991) J Biol Chem. , vol.266 , Issue.33 , pp. 22083-22086
    • Munroe, S.H.1    Lazar, M.A.2
  • 52
    • 41149112564 scopus 로고    scopus 로고
    • A natural antisense transcript regulates Zeb2/Sip1 gene expression during Snail1- induced epithelial-mesenchymal transition
    • Beltran M, Puig I, Peña C, et al. A natural antisense transcript regulates Zeb2/Sip1 gene expression during Snail1- induced epithelial-mesenchymal transition. Genes Dev. 2008;22(6):756-769.
    • (2008) Genes Dev. , vol.22 , Issue.6 , pp. 756-769
    • Beltran, M.1    Puig, I.2    Peña, C.3
  • 53
    • 84869088820 scopus 로고    scopus 로고
    • Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat
    • Carrieri C, Cimatti L, Biagioli M, et al. Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat. Nature. 2012;491(7424):454-457.
    • (2012) Nature. , vol.491 , Issue.7424 , pp. 454-457
    • Carrieri, C.1    Cimatti, L.2    Biagioli, M.3
  • 54
    • 84898747543 scopus 로고    scopus 로고
    • Evolutionary dynamics and tissue specificity ofhumanlong noncodingRNAsin six mammals
    • Washietl S, Kellis M, Garber M. Evolutionary dynamics and tissue specificity ofhumanlong noncodingRNAsin six mammals. Genome Res. 2014;24(4):616-628.
    • (2014) Genome Res. , vol.24 , Issue.4 , pp. 616-628
    • Washietl, S.1    Kellis, M.2    Garber, M.3
  • 55
    • 84455206362 scopus 로고    scopus 로고
    • Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution
    • Ulitsky I, Shkumatava A, Jan CH, Sive H, Bartel DP. Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution. Cell. 2011; 147(7):1537-1550.
    • (2011) Cell. , vol.147 , Issue.7 , pp. 1537-1550
    • Ulitsky, I.1    Shkumatava, A.2    Jan, C.H.3    Sive, H.4    Bartel, D.P.5
  • 56
    • 84889562158 scopus 로고    scopus 로고
    • Divergent transcription: a driving force for new gene origination
    • Wu X, Sharp PA. Divergent transcription: a driving force for new gene origination? Cell. 2013;155(5):990-996.
    • (2013) Cell. , vol.155 , Issue.5 , pp. 990-996
    • Wu, X.1    Sharp, P.A.2
  • 57
    • 24644519490 scopus 로고    scopus 로고
    • The transcriptional landscape of the mammalian genome
    • Carninci P, Kasukawa T, Katayama S, et al. The transcriptional landscape of the mammalian genome. Science. 2005; 309(5740):1559-1563.
    • (2005) Science. , vol.309 , Issue.5740 , pp. 1559-1563
    • Carninci, P.1    Kasukawa, T.2    Katayama, S.3
  • 58
  • 59
    • 58149203228 scopus 로고    scopus 로고
    • SUPERFAMILY-sophisticated comparative genomics, data mining, visualization and phylogeny
    • Database issue
    • Wilson D, Pethica R, Zhou Y, et al. SUPERFAMILY-sophisticated comparative genomics, data mining, visualization and phylogeny. Nucleic Acids Res. 2009;37(Database issue):D380-D386.
    • (2009) Nucleic Acids Res. , vol.37 , pp. D380-D386
    • Wilson, D.1    Pethica, R.2    Zhou, Y.3
  • 60
    • 33846044585 scopus 로고    scopus 로고
    • The SUPERFAMILY database in 2007: families and functions
    • Database issue
    • Wilson D, Madera M, Vogel C, Chothia C, Gough J. The SUPERFAMILY database in 2007: families and functions. Nucleic Acids Res. 2007;35(Database issue):D308-D313.
    • (2007) Nucleic Acids Res. , vol.35 , pp. D308-D313
    • Wilson, D.1    Madera, M.2    Vogel, C.3    Chothia, C.4    Gough, J.5
  • 61
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes
    • Krogh A, Larsson B, von Heijne G, Sonnhammer EL. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol. 2001;305(3):567-580.
    • (2001) J Mol Biol. , vol.305 , Issue.3 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    von Heijne, G.3    Sonnhammer, E.L.4
  • 62
    • 0031240609 scopus 로고    scopus 로고
    • Aneural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
    • Nielsen H, Engelbrecht J, Brunak S, von Heijne G.Aneural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Int J Neural Syst. 1997;8(5-6):581-599.
    • (1997) Int J Neural Syst , vol.8 , Issue.5-6 , pp. 581-599
    • Nielsen, H.1    Engelbrecht, J.2    Brunak, S.3    von Heijne, G.4
  • 63
    • 37648999313 scopus 로고    scopus 로고
    • Distinguishing proteincoding and noncoding genes in the human genome
    • Clamp M, Fry B, Kamal M, et al. Distinguishing proteincoding and noncoding genes in the human genome. Proc Natl Acad Sci U S A. 2007;104(49):19428-19433.
    • (2007) Proc Natl Acad Sci U S A. , vol.104 , Issue.49 , pp. 19428-19433
    • Clamp, M.1    Fry, B.2    Kamal, M.3
  • 64
    • 84888232130 scopus 로고    scopus 로고
    • Chromatin signatures at transcriptional start sites separate two equally populated yet distinct classes of intergenic long noncoding RNAs
    • Marques AC, Hughes J, Graham B, Kowalczyk MS, Higgs DR, Ponting CP. Chromatin signatures at transcriptional start sites separate two equally populated yet distinct classes of intergenic long noncoding RNAs. Genome Biol. 2013;14(11):R131.
    • (2013) Genome Biol. , vol.14 , Issue.11 , pp. R131
    • Marques, A.C.1    Hughes, J.2    Graham, B.3    Kowalczyk, M.S.4    Higgs, D.R.5    Ponting, C.P.6
  • 65
    • 57849109058 scopus 로고    scopus 로고
    • Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
    • Core LJ, Waterfall JJ, Lis JT. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science. 2008;322(5909):1845-1848.
    • (2008) Science. , vol.322 , Issue.5909 , pp. 1845-1848
    • Core, L.J.1    Waterfall, J.J.2    Lis, J.T.3
  • 66
    • 79955836460 scopus 로고    scopus 로고
    • A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cells
    • Hah N, Danko CG, Core L, et al. A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cells. Cell. 2011;145(4):622-634.
    • (2011) Cell. , vol.145 , Issue.4 , pp. 622-634
    • Hah, N.1    Danko, C.G.2    Core, L.3
  • 67
    • 78751659330 scopus 로고    scopus 로고
    • Nascent transcript sequencing visualizes transcription at nucleotide resolution
    • Churchman LS, Weissman JS. Nascent transcript sequencing visualizes transcription at nucleotide resolution. Nature. 2011;469(7330):368-373.
    • (2011) Nature. , vol.469 , Issue.7330 , pp. 368-373
    • Churchman, L.S.1    Weissman, J.S.2
  • 68
    • 0024212067 scopus 로고
    • Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer
    • FrohmanMA,DushMK,Martin GR. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer. Proc Natl Acad Sci U S A. 1988;85(23):8998-9002.
    • (1988) Proc Natl Acad Sci U S A. , vol.85 , Issue.23 , pp. 8998-9002
    • Frohman, M.A.1    Dush, M.K.2    Martin, G.R.3
  • 69
    • 9144233601 scopus 로고    scopus 로고
    • Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage
    • Shiraki T, Kondo S, Katayama S, et al. Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage. Proc Natl Acad Sci U S A. 2003;100(26):15776-15781.
    • (2003) Proc Natl Acad Sci U S A. , vol.100 , Issue.26 , pp. 15776-15781
    • Shiraki, T.1    Kondo, S.2    Katayama, S.3
  • 70
    • 65549105550 scopus 로고    scopus 로고
    • Massive transcriptional start site analysis of human genes in hypoxia cells
    • Tsuchihara K, Suzuki Y, Wakaguri H, et al. Massive transcriptional start site analysis of human genes in hypoxia cells. Nucleic Acids Res. 2009;37(7):2249-2263.
    • (2009) Nucleic Acids Res. , vol.37 , Issue.7 , pp. 2249-2263
    • Tsuchihara, K.1    Suzuki, Y.2    Wakaguri, H.3
  • 71
    • 38549094621 scopus 로고    scopus 로고
    • DBTSS: database of transcription start sites, progress report
    • Database issue
    • Wakaguri H, Yamashita R, Suzuki Y, Sugano S, Nakai K. DBTSS: database of transcription start sites, progress report. Nucleic Acids Res. 2008;36(Database issue): D97-D101.
    • (2008) Nucleic Acids Res. , vol.36 , pp. D97-D101
    • Wakaguri, H.1    Yamashita, R.2    Suzuki, Y.3    Sugano, S.4    Nakai, K.5
  • 72
    • 78650972252 scopus 로고    scopus 로고
    • Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs
    • Jan CH, Friedman RC, Ruby JG, Bartel DP. Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs. Nature. 2011;469(7328):97-101.
    • (2011) Nature. , vol.469 , Issue.7328 , pp. 97-101
    • Jan, C.H.1    Friedman, R.C.2    Ruby, J.G.3    Bartel, D.P.4
  • 73
    • 84870566023 scopus 로고    scopus 로고
    • Long noncoding RNAs in C
    • Nam JW, Bartel DP. Long noncoding RNAs in C. elegans. Genome Res. 2012;22(12):2529-2540.
    • (2012) elegans. Genome Res. , vol.22 , Issue.12 , pp. 2529-2540
    • Nam, J.W.1    Bartel, D.P.2
  • 74
    • 77952123055 scopus 로고    scopus 로고
    • Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
    • Trapnell C, Williams BA, Pertea G, et al. Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol. 2010;28(5):511-515.
    • (2010) Nat Biotechnol. , vol.28 , Issue.5 , pp. 511-515
    • Trapnell, C.1    Williams, B.A.2    Pertea, G.3
  • 75
    • 84895908120 scopus 로고    scopus 로고
    • The evolution of lncRNA repertoires and expression patterns in tetrapods
    • Necsulea A, Soumillon M, Warnefors M, et al. The evolution of lncRNA repertoires and expression patterns in tetrapods. Nature. 2014;505(7485):635-640.
    • (2014) Nature. , vol.505 , Issue.7485 , pp. 635-640
    • Necsulea, A.1    Soumillon, M.2    Warnefors, M.3
  • 76
    • 84857836107 scopus 로고    scopus 로고
    • Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
    • Pauli A, Valen E, Lin MF, et al. Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis. Genome Res. 2012;22(3):577-591.
    • (2012) Genome Res. , vol.22 , Issue.3 , pp. 577-591
    • Pauli, A.1    Valen, E.2    Lin, M.F.3
  • 77
    • 34547582418 scopus 로고    scopus 로고
    • CPC: assess the proteincoding potential of transcripts using sequence features and support vector machine
    • Web Server issue
    • Kong L, Zhang Y, Ye ZQ, et al. CPC: assess the proteincoding potential of transcripts using sequence features and support vector machine. Nucleic Acids Res. 2007;35(Web Server issue):W345-W349.
    • (2007) Nucleic Acids Res. , vol.35 , pp. W345-W349
    • Kong, L.1    Zhang, Y.2    Ye, Z.Q.3
  • 78
    • 3242878575 scopus 로고    scopus 로고
    • CSTminer: a web tool for the identification of coding and noncoding conserved sequence tags through cross-species genome comparison
    • Web Server issue
    • Castrignano T, Canali A, Grillo G, Liuni S, Mignone F, Pesole G. CSTminer: a web tool for the identification of coding and noncoding conserved sequence tags through cross-species genome comparison. Nucleic Acids Res. 2004;32(Web Server issue):W624-W627.
    • (2004) Nucleic Acids Res. , vol.32 , pp. W624-W627
    • Castrignano, T.1    Canali, A.2    Grillo, G.3    Liuni, S.4    Mignone, F.5    Pesole, G.6
  • 79
    • 0003157183 scopus 로고    scopus 로고
    • Noncoding RNA gene detection using comparative sequence analysis
    • Rivas E, Eddy SR. Noncoding RNA gene detection using comparative sequence analysis. BMC Bioinformatics. 2001;2:8.
    • (2001) BMC Bioinformatics. , vol.2 , pp. 8
    • Rivas, E.1    Eddy, S.R.2
  • 80
    • 0032900737 scopus 로고    scopus 로고
    • CRITICA: coding region identification tool invoking comparative analysis
    • Badger JH, Olsen GJ. CRITICA: coding region identification tool invoking comparative analysis. Mol Biol Evol. 1999;16(4):512-524.
    • (1999) Mol Biol Evol. , vol.16 , Issue.4 , pp. 512-524
    • Badger, J.H.1    Olsen, G.J.2
  • 81
    • 33646488342 scopus 로고    scopus 로고
    • Distinguishing protein-coding from non-coding RNAs through support vector machines
    • Liu J, Gough J, Rost B. Distinguishing protein-coding from non-coding RNAs through support vector machines. PLoS Genet. 2006;2(4):e29.
    • (2006) PLoS Genet. , vol.2 , Issue.4
    • Liu, J.1    Gough, J.2    Rost, B.3
  • 82
    • 62549134121 scopus 로고    scopus 로고
    • Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling
    • IngoliaNT,GhaemmaghamiS,NewmanJR, Weissman JS. Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling. Science. 2009; 324(5924):218-223.
    • (2009) Science. , vol.324 , Issue.5924 , pp. 218-223
    • Ingolia, N.T.1    Ghaemmaghami, S.2    Newman, J.R.3    Weissman, J.S.4
  • 83
    • 0032561349 scopus 로고    scopus 로고
    • The H19 transcript is associated with polysomes and may regulate IGF2 expression in trans
    • Li YM, Franklin G, Cui HM, et al. The H19 transcript is associated with polysomes and may regulate IGF2 expression in trans. J Biol Chem. 1998;273(43):28247-28252.
    • (1998) J Biol Chem. , vol.273 , Issue.43 , pp. 28247-28252
    • Li, Y.M.1    Franklin, G.2    Cui, H.M.3
  • 85
    • 58149179988 scopus 로고    scopus 로고
    • The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs
    • Database issue
    • Mituyama T, Yamada K, Hattori E, et al. The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs. Nucleic Acids Res. 2009; 37(Database issue):D89-D92.
    • (2009) Nucleic Acids Res. , vol.37 , pp. D89-D92
    • Mituyama, T.1    Yamada, K.2    Hattori, E.3
  • 86
    • 84860742355 scopus 로고    scopus 로고
    • NONCODE v3.0: integrative annotation of long noncoding RNAs
    • Database issue
    • Bu D, Yu K, Sun S, et al. NONCODE v3.0: integrative annotation of long noncoding RNAs. Nucleic Acids Res. 2012;40(Database issue):D210-D215.
    • (2012) Nucleic Acids Res. , vol.40 , pp. D210-D215
    • Bu, D.1    Yu, K.2    Sun, S.3
  • 89
    • 84875530540 scopus 로고    scopus 로고
    • LNCipedia: a database for annotated human lncRNA transcript sequences and structures
    • Database issue
    • Volders PJ, Helsens K, Wang X, et al. LNCipedia: a database for annotated human lncRNA transcript sequences and structures. Nucleic Acids Res. 2013;41(Database issue): D246-D251.
    • (2013) Nucleic Acids Res. , vol.41 , pp. D246-D251
    • Volders, P.J.1    Helsens, K.2    Wang, X.3
  • 90
    • 84876566914 scopus 로고    scopus 로고
    • ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIPSeq data
    • Database issue
    • Yang JH, Li JH, Jiang S, Zhou H, Qu LH. ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIPSeq data. Nucleic Acids Res. 2013;41(Database issue): D177-D187.
    • (2013) Nucleic Acids Res. , vol.41 , pp. D177-D187
    • Yang, J.H.1    Li, J.H.2    Jiang, S.3    Zhou, H.4    Qu, L.H.5
  • 91
    • 84873300214 scopus 로고    scopus 로고
    • Braveheart, a long noncoding RNA required for cardiovascular lineage commitment
    • Klattenhoff CA, Scheuermann JC, Surface LE, et al. Braveheart, a long noncoding RNA required for cardiovascular lineage commitment. Cell. 2013;152(3):570-583.
    • (2013) Cell. , vol.152 , Issue.3 , pp. 570-583
    • Klattenhoff, C.A.1    Scheuermann, J.C.2    Surface, L.E.3
  • 92
    • 84872135457 scopus 로고    scopus 로고
    • Control of somatic tissue differentiation by the long non-codingRNATINCR
    • Kretz M, Siprashvili Z, Chu C, et al. Control of somatic tissue differentiation by the long non-codingRNATINCR. Nature. 2013;493(7431):231-235.
    • (2013) Nature. , vol.493 , Issue.7431 , pp. 231-235
    • Kretz, M.1    Siprashvili, Z.2    Chu, C.3
  • 93
    • 84863116597 scopus 로고    scopus 로고
    • Suppression of progenitor differentiation requires the long noncoding RNA ANCR
    • Kretz M, Webster DE, Flockhart RJ, et al. Suppression of progenitor differentiation requires the long noncoding RNA ANCR. Genes Dev. 2012;26(4):338-343.
    • (2012) Genes Dev. , vol.26 , Issue.4 , pp. 338-343
    • Kretz, M.1    Webster, D.E.2    Flockhart, R.J.3
  • 94
    • 84902437938 scopus 로고    scopus 로고
    • Long noncoding RNAs are spatially correlated with transcription factors and regulate lung development
    • Herriges MJ, SwarrDT,MorleyMP,et al. Long noncoding RNAs are spatially correlated with transcription factors and regulate lung development. Genes Dev. 2014;28(12): 1363-1379.
    • (2014) Genes Dev. , vol.28 , Issue.12 , pp. 1363-1379
    • Herriges, M.J.1    Swarr, D.T.2    Morley, M.P.3
  • 95
    • 77955323879 scopus 로고    scopus 로고
    • A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response
    • Huarte M, Guttman M, Feldser D, et al. A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response. Cell. 2010;142(3):409-419.
    • (2010) Cell. , vol.142 , Issue.3 , pp. 409-419
    • Huarte, M.1    Guttman, M.2    Feldser, D.3
  • 96
    • 79956010263 scopus 로고    scopus 로고
    • Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network
    • Liao Q, Liu C, Yuan X, et al. Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network. Nucleic Acids Res. 2011;39(9): 3864-3878.
    • (2011) Nucleic Acids Res. , vol.39 , Issue.9 , pp. 3864-3878
    • Liao, Q.1    Liu, C.2    Yuan, X.3
  • 97
    • 79959949911 scopus 로고    scopus 로고
    • ncFANs: a web server for functional annotation of long non-coding RNAs
    • Web Server issue
    • Liao Q, Xiao H, Bu D, et al. ncFANs: a web server for functional annotation of long non-coding RNAs. Nucleic Acids Res. 2011;39(Web Server issue):W118-W124.
    • (2011) Nucleic Acids Res. , vol.39 , pp. W118-W124
    • Liao, Q.1    Xiao, H.2    Bu, D.3
  • 98
    • 79955468280 scopus 로고    scopus 로고
    • Long noncoding RNA ANRIL is required for the PRC2 recruitment to and silencing of p15(INK4B) tumor suppressor gene
    • Kotake Y, Nakagawa T, Kitagawa K, et al. Long noncoding RNA ANRIL is required for the PRC2 recruitment to and silencing of p15(INK4B) tumor suppressor gene. Oncogene. 2011;30(16):1956-1962.
    • (2011) Oncogene. , vol.30 , Issue.16 , pp. 1956-1962
    • Kotake, Y.1    Nakagawa, T.2    Kitagawa, K.3
  • 99
    • 84878871969 scopus 로고    scopus 로고
    • linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis
    • Maamar H, Cabili MN, Rinn J, Raj A. linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis. Genes Dev. 2013;27(11):1260-1271.
    • (2013) Genes Dev. , vol.27 , Issue.11 , pp. 1260-1271
    • Maamar, H.1    Cabili, M.N.2    Rinn, J.3    Raj, A.4
  • 101
    • 79953748673 scopus 로고    scopus 로고
    • A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
    • Wang KC, Yang YW, Liu B, et al. A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression. Nature. 2011;472(7341):120-124.
    • (2011) Nature. , vol.472 , Issue.7341 , pp. 120-124
    • Wang, K.C.1    Yang, Y.W.2    Liu, B.3
  • 102
    • 84874368349 scopus 로고    scopus 로고
    • Activating RNAs associate with Mediator to enhance chromatin architecture and transcription
    • Lai F, Orom UA, Cesaroni M, et al. Activating RNAs associate with Mediator to enhance chromatin architecture and transcription. Nature. 2013;494(7438):497-501.
    • (2013) Nature. , vol.494 , Issue.7438 , pp. 497-501
    • Lai, F.1    Orom, U.A.2    Cesaroni, M.3
  • 103
    • 84896508973 scopus 로고    scopus 로고
    • Long-range interaction and correlation between MYC enhancer and oncogenic long noncoding RNA CARLo-5
    • Kim T, Cui R, Jeon YJ, et al. Long-range interaction and correlation between MYC enhancer and oncogenic long noncoding RNA CARLo-5. Proc Natl Acad Sci U S A. 2014;111(11):4173-4178.
    • (2014) Proc Natl Acad Sci U S A. , vol.111 , Issue.11 , pp. 4173-4178
    • Kim, T.1    Cui, R.2    Jeon, Y.J.3
  • 104
    • 79959756263 scopus 로고    scopus 로고
    • Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters
    • Hung T,WangY, Lin MF, et al. Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters. Nat Genet. 2011;43(7):621-629.
    • (2011) Nat Genet. , vol.43 , Issue.7 , pp. 621-629
    • Hung, T.1    Wang, Y.2    Lin, M.F.3
  • 105
    • 80052869283 scopus 로고    scopus 로고
    • lincRNAs act in the circuitry controlling pluripotency and differentiation
    • Guttman M, Donaghey J, Carey BW, et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature. 2011;477(7364):295-300.
    • (2011) Nature. , vol.477 , Issue.7364 , pp. 295-300
    • Guttman, M.1    Donaghey, J.2    Carey, B.W.3
  • 106
    • 34250729138 scopus 로고    scopus 로고
    • Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs
    • Rinn JL, Kertesz M, Wang JK, et al. Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs. Cell. 2007;129(7):1311-1323.
    • (2007) Cell. , vol.129 , Issue.7 , pp. 1311-1323
    • Rinn, J.L.1    Kertesz, M.2    Wang, J.K.3
  • 107
    • 78650253763 scopus 로고    scopus 로고
    • Genome-wide identification of polycomb-associated RNAs by RIP-seq
    • Zhao J, Ohsumi TK, Kung JT, et al. Genome-wide identification of polycomb-associated RNAs by RIP-seq. Mol Cell. 2010;40(6):939-953.
    • (2010) Mol Cell. , vol.40 , Issue.6 , pp. 939-953
    • Zhao, J.1    Ohsumi, T.K.2    Kung, J.T.3
  • 109
    • 0031044166 scopus 로고    scopus 로고
    • Xist-deficient mice are defective in dosage compensation but not spermatogenesis
    • Marahrens Y, Panning B, Dausman J, Strauss W, Jaenisch R. Xist-deficient mice are defective in dosage compensation but not spermatogenesis. Genes Dev. 1997;11(2): 156-166.
    • (1997) Genes Dev. , vol.11 , Issue.2 , pp. 156-166
    • Marahrens, Y.1    Panning, B.2    Dausman, J.3    Strauss, W.4    Jaenisch, R.5
  • 110
    • 77954572735 scopus 로고    scopus 로고
    • Long noncoding RNA as modular scaffold of histone modification complexes
    • Tsai MC, Manor O, Wan Y, et al. Long noncoding RNA as modular scaffold of histone modification complexes. Science. 2010;329(5992):689-693.
    • (2010) Science. , vol.329 , Issue.5992 , pp. 689-693
    • Tsai, M.C.1    Manor, O.2    Wan, Y.3
  • 111
    • 84903903469 scopus 로고    scopus 로고
    • Structural insights into the stabilization of MALAT1 noncoding RNA by a bipartite triple helix
    • Brown JA, Bulkley D,WangJ, et al. Structural insights into the stabilization of MALAT1 noncoding RNA by a bipartite triple helix. Nat Struct Mol Biol. 2014;21(7):633-640.
    • (2014) Nat Struct Mol Biol. , vol.21 , Issue.7 , pp. 633-640
    • Brown, J.A.1    Bulkley, D.2    Wang, J.3
  • 112
    • 78649807567 scopus 로고    scopus 로고
    • Phosphorylation of the PRC2 component Ezh2 is cell cycle-regulated and up-regulates its binding to ncRNA
    • Kaneko S, Li G, Son J, et al. Phosphorylation of the PRC2 component Ezh2 is cell cycle-regulated and up-regulates its binding to ncRNA. Genes Dev. 2010;24(23):2615-2620.
    • (2010) Genes Dev. , vol.24 , Issue.23 , pp. 2615-2620
    • Kaneko, S.1    Li, G.2    Son, J.3
  • 113
    • 84904507962 scopus 로고    scopus 로고
    • Regulatory interactions between RNA and polycomb repressive complex 2
    • Cifuentes-Rojas C, Hernandez AJ, Sarma K, Lee JT. Regulatory interactions between RNA and polycomb repressive complex 2. Mol Cell. 2014;55(2):171-185.
    • (2014) Mol Cell. , vol.55 , Issue.2 , pp. 171-185
    • Cifuentes-Rojas, C.1    Hernandez, A.J.2    Sarma, K.3    Lee, J.T.4
  • 115
    • 84890589760 scopus 로고    scopus 로고
    • Nucleosomebinding activities within JARID2 and EZH1 regulate the function of PRC2 on chromatin
    • Son J, Shen SS, Margueron R, Reinberg D. Nucleosomebinding activities within JARID2 and EZH1 regulate the function of PRC2 on chromatin. Genes Dev. 2013;27(24): 2663-2677.
    • (2013) Genes Dev. , vol.27 , Issue.24 , pp. 2663-2677
    • Son, J.1    Shen, S.S.2    Margueron, R.3    Reinberg, D.4
  • 116
    • 84892866184 scopus 로고    scopus 로고
    • Jarid2 is implicated in the initial Xist-induced targeting of PRC2 to the inactive X chromosome
    • da Rocha ST, Boeva V, Escamilla-Del-Arenal M, et al. Jarid2 is implicated in the initial Xist-induced targeting of PRC2 to the inactive X chromosome. Mol Cell. 2014; 53(2):301-316.
    • (2014) Mol Cell. , vol.53 , Issue.2 , pp. 301-316
    • da Rocha, S.T.1    Boeva, V.2    Escamilla-Del-Arenal, M.3
  • 117
    • 84892889808 scopus 로고    scopus 로고
    • Interactions between JARID2 and noncoding RNAs regulate PRC2 recruitment to chromatin
    • Kaneko S, Bonasio R, Saldaña-Meyer R, et al. Interactions between JARID2 and noncoding RNAs regulate PRC2 recruitment to chromatin. Mol Cell. 2014;53(2):290-300.
    • (2014) Mol Cell. , vol.53 , Issue.2 , pp. 290-300
    • Kaneko, S.1    Bonasio, R.2    Saldaña-Meyer, R.3
  • 118
    • 84898723075 scopus 로고    scopus 로고
    • Essential role of lncRNA binding for WDR5 maintenance of active chromatin and embryonic stem cell pluripotency
    • Yang YW, Flynn RA, Chen Y, et al. Essential role of lncRNA binding for WDR5 maintenance of active chromatin and embryonic stem cell pluripotency. Elife. 2014; 3:e02046.
    • (2014) Elife. , vol.3
    • Yang, Y.W.1    Flynn, R.A.2    Chen, Y.3
  • 119
    • 84873829893 scopus 로고    scopus 로고
    • The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse
    • Grote P, Wittler L, Hendrix D, et al. The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse. Dev Cell. 2013;24(2): 206-214.
    • (2013) Dev Cell. , vol.24 , Issue.2 , pp. 206-214
    • Grote, P.1    Wittler, L.2    Hendrix, D.3
  • 120
    • 84901192884 scopus 로고    scopus 로고
    • Quiescence-induced LncRNAs trigger H4K20 trimethylation and transcriptional silencing
    • Bierhoff H, Dammert MA, Brocks D, Dambacher S, Schotta G, Grummt I. Quiescence-induced LncRNAs trigger H4K20 trimethylation and transcriptional silencing. Mol Cell. 2014;54(4):675-682.
    • (2014) Mol Cell. , vol.54 , Issue.4 , pp. 675-682
    • Bierhoff, H.1    Dammert, M.A.2    Brocks, D.3    Dambacher, S.4    Schotta, G.5    Grummt, I.6
  • 121
    • 84888057006 scopus 로고    scopus 로고
    • DNMT1- interacting RNAs block gene-specific DNA methylation
    • Di Ruscio A, Ebralidze AK, Benoukraf T, et al. DNMT1- interacting RNAs block gene-specific DNA methylation. Nature. 2013;503(7476):371-376.
    • (2013) Nature. , vol.503 , Issue.7476 , pp. 371-376
    • Di Ruscio, A.1    Ebralidze, A.K.2    Benoukraf, T.3
  • 123
    • 84898854590 scopus 로고    scopus 로고
    • CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53
    • Saldana-Meyer R, Gonzalez-Buendía E, Guerrero G, et al. CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53. Genes Dev. 2014;28(7):723-734.
    • (2014) Genes Dev. , vol.28 , Issue.7 , pp. 723-734
    • Saldana-Meyer, R.1    Gonzalez-Buendía, E.2    Guerrero, G.3
  • 124
    • 78349252731 scopus 로고    scopus 로고
    • Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRA
    • Yao H, Brick K, Evrard Y, Xiao T, Camerini-Otero RD, Felsenfeld G. Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRA. Genes Dev. 2010;24(22): 2543-2555.
    • (2010) Genes Dev. , vol.24 , Issue.22 , pp. 2543-2555
    • Yao, H.1    Brick, K.2    Evrard, Y.3    Xiao, T.4    Camerini-Otero, R.D.5    Felsenfeld, G.6
  • 125
    • 84892923750 scopus 로고    scopus 로고
    • The long noncodingRNA THRIL regulates TNFα expression through its interaction with hnRNPL
    • Li Z, Chao TC, Chang KY, et al. The long noncodingRNA THRIL regulates TNFα expression through its interaction with hnRNPL. Proc Natl Acad Sci U S A. 2014;111(3): 1002-1007.
    • (2014) Proc Natl Acad Sci U S A. , vol.111 , Issue.3 , pp. 1002-1007
    • Li, Z.1    Chao, T.C.2    Chang, K.Y.3
  • 126
    • 39549103642 scopus 로고    scopus 로고
    • Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock
    • Mariner PD, Walters RD, Espinoza CA, et al. Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock. Mol Cell. 2008;29(4):499-509.
    • (2008) Mol Cell. , vol.29 , Issue.4 , pp. 499-509
    • Mariner, P.D.1    Walters, R.D.2    Espinoza, C.A.3
  • 127
    • 84884837017 scopus 로고    scopus 로고
    • Computational prediction of associations between long non-coding RNAs and proteins
    • Lu Q, Ren S, Lu M, et al. Computational prediction of associations between long non-coding RNAs and proteins. BMC Genomics. 2013;14:651.
    • (2013) BMC Genomics. , vol.14 , pp. 651
    • Lu, Q.1    Ren, S.2    Lu, M.3
  • 128
    • 84891818924 scopus 로고    scopus 로고
    • starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein- RNA interaction networks from large-scale CLIP-Seq data
    • Database issue
    • Li JH, Liu S, Zhou H, Qu LH, Yang JH. starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein- RNA interaction networks from large-scale CLIP-Seq data. Nucleic Acids Res. 2014;42(Database issue):D92- D97.
    • (2014) Nucleic Acids Res. , vol.42 , pp. D92- D97
    • Li, J.H.1    Liu, S.2    Zhou, H.3    Qu, L.H.4    Yang, J.H.5
  • 129
    • 84893351549 scopus 로고    scopus 로고
    • Genome-wide probing ofRNAstructure reveals active unfolding of mRNA structures in vivo
    • Rouskin S, Zubradt M, Washietl S, Kellis M, Weissman JS. Genome-wide probing ofRNAstructure reveals active unfolding of mRNA structures in vivo. Nature. 2014; 505(7485):701-705.
    • (2014) Nature. , vol.505 , Issue.7485 , pp. 701-705
    • Rouskin, S.1    Zubradt, M.2    Washietl, S.3    Kellis, M.4    Weissman, J.S.5
  • 130
    • 84893358533 scopus 로고    scopus 로고
    • Landscape and variation of RNA secondary structure across the human transcriptome
    • Wan Y, Qu K, Zhang QC, et al. Landscape and variation of RNA secondary structure across the human transcriptome. Nature. 2014;505(7485):706-709.
    • (2014) Nature. , vol.505 , Issue.7485 , pp. 706-709
    • Wan, Y.1    Qu, K.2    Zhang, Q.C.3
  • 131
    • 80054756754 scopus 로고    scopus 로고
    • Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions
    • Chu C,QuK, Zhong FL, Artandi SE, Chang HY. Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions. Mol Cell. 2011;44(4): 667-678.
    • (2011) Mol Cell. , vol.44 , Issue.4 , pp. 667-678
    • Chu, C.1    Qu, K.2    Zhong, F.L.3    Artandi, S.E.4    Chang, H.Y.5
  • 133
    • 84879642373 scopus 로고    scopus 로고
    • The Xist lncRNA Exploits Three-Dimensional Genome Architecture to Spread Across the X Chromosome
    • Engreitz JM, Pandya-Jones A, McDonel P, et al. The Xist lncRNA Exploits Three-Dimensional Genome Architecture to Spread Across the X Chromosome. Science. 2013; 341(6147):1237973.
    • (2013) Science. , vol.341 , Issue.6147 , pp. 1237973
    • Engreitz, J.M.1    Pandya-Jones, A.2    McDonel, P.3
  • 134
    • 84890549512 scopus 로고    scopus 로고
    • High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation
    • Simon MD, Pinter SF, Fang R, et al. High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation. Nature. 2013;504(7480):465-469.
    • (2013) Nature. , vol.504 , Issue.7480 , pp. 465-469
    • Simon, M.D.1    Pinter, S.F.2    Fang, R.3
  • 135
    • 84897896279 scopus 로고    scopus 로고
    • The long non-coding RNA Paupar regulates the expression of both local and distal genes
    • Vance KW, Sansom SN, Lee S, et al. The long non-coding RNA Paupar regulates the expression of both local and distal genes. The EMBO journal. 2014;33(4):296-311.
    • (2014) The EMBO journal. , vol.33 , Issue.4 , pp. 296-311
    • Vance, K.W.1    Sansom, S.N.2    Lee, S.3
  • 136
    • 79951495822 scopus 로고    scopus 로고
    • lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements
    • Gong C, Maquat LE. lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements. Nature. 2011;470(7333):284-288.
    • (2011) Nature. , vol.470 , Issue.7333 , pp. 284-288
    • Gong, C.1    Maquat, L.E.2
  • 137
    • 84865379361 scopus 로고    scopus 로고
    • LincRNAp21 suppresses target mRNA translation
    • Yoon JH, Abdelmohsen K, Srikantan S, et al. LincRNAp21 suppresses target mRNA translation. Mol Cell. 2012; 47(4):648-655.
    • (2012) Mol Cell. , vol.47 , Issue.4 , pp. 648-655
    • Yoon, J.H.1    Abdelmohsen, K.2    Srikantan, S.3
  • 138
    • 84901954135 scopus 로고    scopus 로고
    • LincRNA-p21 activates p21 in cis to promote Polycomb target gene expression and to enforce the G1/S checkpoint
    • Dimitrova N, Zamudio JR, Jong RM, et al. LincRNA-p21 activates p21 in cis to promote Polycomb target gene expression and to enforce the G1/S checkpoint. Mol Cell. 2014;54(5):777-790.
    • (2014) Mol Cell. , vol.54 , Issue.5 , pp. 777-790
    • Dimitrova, N.1    Zamudio, J.R.2    Jong, R.M.3
  • 139
    • 80054715378 scopus 로고    scopus 로고
    • A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA
    • Cesana M, Cacchiarelli D, Legnini I, et al. A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA. Cell. 2011;147(2):358-369.
    • (2011) Cell. , vol.147 , Issue.2 , pp. 358-369
    • Cesana, M.1    Cacchiarelli, D.2    Legnini, I.3
  • 140
    • 79961170994 scopus 로고    scopus 로고
    • A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?
    • Salmena L, Poliseno L, Tay Y, Kats L, Pandolfi PP. A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language? Cell. 2011;146(3):353-358.
    • (2011) Cell. , vol.146 , Issue.3 , pp. 353-358
    • Salmena, L.1    Poliseno, L.2    Tay, Y.3    Kats, L.4    Pandolfi, P.P.5
  • 141
    • 80054700538 scopus 로고    scopus 로고
    • Coding-independent regulation of the tumor suppressor PTEN by competing endogenous mRNAs
    • Tay Y, Kats L, Salmena L, et al. Coding-independent regulation of the tumor suppressor PTEN by competing endogenous mRNAs. Cell. 2011;147(2):344-357.
    • (2011) Cell. , vol.147 , Issue.2 , pp. 344-357
    • Tay, Y.1    Kats, L.2    Salmena, L.3
  • 142
    • 80054681545 scopus 로고    scopus 로고
    • In vivo identification of tumor- suppressive PTEN ceRNAs in an oncogenic BRAFinduced mouse model of melanoma
    • Karreth FA, Tay Y, Perna D, et al. In vivo identification of tumor- suppressive PTEN ceRNAs in an oncogenic BRAFinduced mouse model of melanoma. Cell. 2011;147(2): 382-395.
    • (2011) Cell. , vol.147 , Issue.2 , pp. 382-395
    • Karreth, F.A.1    Tay, Y.2    Perna, D.3
  • 143
    • 84885374473 scopus 로고    scopus 로고
    • The imprinted H19 lncRNA antagonizes let-7 microRNAs
    • Kallen AN, Zhou XB, Xu J, et al. The imprinted H19 lncRNA antagonizes let-7 microRNAs. Mol Cell. 2013; 52(1):101-112.
    • (2013) Mol Cell. , vol.52 , Issue.1 , pp. 101-112
    • Kallen, A.N.1    Zhou, X.B.2    Xu, J.3
  • 144
    • 84903736048 scopus 로고    scopus 로고
    • Regulation of pri-miRNA processing by a long noncoding RNA transcribed from an ultraconserved region
    • Liz J, Portela A, Soler M, et al. Regulation of pri-miRNA processing by a long noncoding RNA transcribed from an ultraconserved region. Mol Cell. 2014;55(1):138-147.
    • (2014) Mol Cell. , vol.55 , Issue.1 , pp. 138-147
    • Liz, J.1    Portela, A.2    Soler, M.3
  • 145
    • 0032514257 scopus 로고    scopus 로고
    • Stabilization and localization of Xist RNA are controlled by separate mechanisms and are not sufficient for X inactivation
    • Clemson CM, Chow JC, Brown CJ, Lawrence JB. Stabilization and localization of Xist RNA are controlled by separate mechanisms and are not sufficient for X inactivation. J Cell Biol. 1998;142(1):13-23.
    • (1998) J Cell Biol. , vol.142 , Issue.1 , pp. 13-23
    • Clemson, C.M.1    Chow, J.C.2    Brown, C.J.3    Lawrence, J.B.4
  • 146
    • 0032898752 scopus 로고    scopus 로고
    • Xist RNA exhibits a banded localization on the inactive X chromosome and is excluded from autosomal material in cis
    • Duthie SM, Nesterova TB, Formstone EJ, et al. Xist RNA exhibits a banded localization on the inactive X chromosome and is excluded from autosomal material in cis.Hum Mol Genet. 1999;8(2):195-204.
    • (1999) Hum Mol Genet , vol.8 , Issue.2 , pp. 195-204
    • Duthie, S.M.1    Nesterova, T.B.2    Formstone, E.J.3
  • 148
    • 54049138948 scopus 로고    scopus 로고
    • Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation
    • Pandey RR, Mondal T, Mohammad F, et al. Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation. Mol Cell. 2008;32(2):232-246.
    • (2008) Mol Cell. , vol.32 , Issue.2 , pp. 232-246
    • Pandey, R.R.1    Mondal, T.2    Mohammad, F.3
  • 149
    • 56549111129 scopus 로고    scopus 로고
    • The Air noncoding RNAepigenetically silences transcription by targeting G9a to chromatin
    • Nagano T, Mitchell JA, Sanz LA, et al. The Air noncoding RNAepigenetically silences transcription by targeting G9a to chromatin. Science. 2008;322(5908):1717-1720.
    • (2008) Science. , vol.322 , Issue.5908 , pp. 1717-1720
    • Nagano, T.1    Mitchell, J.A.2    Sanz, L.A.3
  • 150
    • 36148967315 scopus 로고    scopus 로고
    • Suggestive evidence for chromosomal localization of non-coding RNA from imprinted LIT1
    • Murakami K, Oshimura M, Kugoh H. Suggestive evidence for chromosomal localization of non-coding RNA from imprinted LIT1. J Hum Genet. 2007;52(11):926-933.
    • (2007) J Hum Genet. , vol.52 , Issue.11 , pp. 926-933
    • Murakami, K.1    Oshimura, M.2    Kugoh, H.3
  • 151
    • 60149092541 scopus 로고    scopus 로고
    • The long noncodingRNAKcnq1ot1 organises a lineage-specific nuclear domain for epigenetic gene silencing
    • Redrup L, Branco MR, Perdeaux ER, et al. The long noncodingRNAKcnq1ot1 organises a lineage-specific nuclear domain for epigenetic gene silencing. Development. 2009; 136(4):525-530.
    • (2009) Development. , vol.136 , Issue.4 , pp. 525-530
    • Redrup, L.1    Branco, M.R.2    Perdeaux, E.R.3
  • 152
    • 0025829449 scopus 로고
    • Characterization of a murine gene expressed from the inactive X chromosome
    • Borsani G, Tonlorenzi R, Simmler MC, et al. Characterization of a murine gene expressed from the inactive X chromosome. Nature. 1991;351(6324):325-329.
    • (1991) Nature. , vol.351 , Issue.6324 , pp. 325-329
    • Borsani, G.1    Tonlorenzi, R.2    Simmler, M.C.3
  • 153
    • 0025727201 scopus 로고
    • Conservation of position and exclusive expression of mouse Xist from the inactive X chromosome
    • Brockdorff N, Ashworth A, Kay GF, et al. Conservation of position and exclusive expression of mouse Xist from the inactive X chromosome. Nature. 1991;351(6324):329-331.
    • (1991) Nature. , vol.351 , Issue.6324 , pp. 329-331
    • Brockdorff, N.1    Ashworth, A.2    Kay, G.F.3
  • 154
    • 0026489906 scopus 로고
    • The product of the mouse Xist gene is a 15 kb inactive X-specific transcript containing no conserved ORF and located in the nucleus
    • Brockdorff N, Ashworth A, Kay GF, et al. The product of the mouse Xist gene is a 15 kb inactive X-specific transcript containing no conserved ORF and located in the nucleus. Cell. 1992;71(3):515-526.
    • (1992) Cell. , vol.71 , Issue.3 , pp. 515-526
    • Brockdorff, N.1    Ashworth, A.2    Kay, G.F.3
  • 155
    • 0026456701 scopus 로고
    • ThehumanXIST gene: analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus
    • BrownCJ, HendrichBD,Rupert JL, et al.ThehumanXIST gene: analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus. Cell. 1992;71(3):527-542.
    • (1992) Cell , vol.71 , Issue.3 , pp. 527-542
    • Brown, C.J.1    Hendrich, B.D.2    Rupert, J.L.3
  • 156
    • 0033637110 scopus 로고    scopus 로고
    • A shift from reversible to irreversible X inactivation is triggered during ES cell differentiation
    • Wutz A, Jaenisch R. A shift from reversible to irreversible X inactivation is triggered during ES cell differentiation. Mol Cell. 2000;5(4):695-705.
    • (2000) Mol Cell. , vol.5 , Issue.4 , pp. 695-705
    • Wutz, A.1    Jaenisch, R.2
  • 157
    • 0036479009 scopus 로고    scopus 로고
    • Chromosomal silencing and localization are mediated by different domains of Xist RNA
    • Wutz A, Rasmussen TP, Jaenisch R. Chromosomal silencing and localization are mediated by different domains of Xist RNA. Nat Genet. 2002;30(2):167-174.
    • (2002) Nat Genet. , vol.30 , Issue.2 , pp. 167-174
    • Wutz, A.1    Rasmussen, T.P.2    Jaenisch, R.3
  • 158
    • 55349109963 scopus 로고    scopus 로고
    • Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome
    • Zhao J, Sun BK, Erwin JA, Song JJ, Lee JT. Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome. Science. 2008;322(5902):750-756.
    • (2008) Science. , vol.322 , Issue.5902 , pp. 750-756
    • Zhao, J.1    Sun, B.K.2    Erwin, J.A.3    Song, J.J.4    Lee, J.T.5
  • 159
    • 79959948197 scopus 로고    scopus 로고
    • YY1 tethers Xist RNA to the inactive X nucleation center
    • Jeon Y, Lee JT. YY1 tethers Xist RNA to the inactive X nucleation center. Cell. 2011;146(1):119-133.
    • (2011) Cell. , vol.146 , Issue.1 , pp. 119-133
    • Jeon, Y.1    Lee, J.T.2
  • 160
    • 0033214928 scopus 로고    scopus 로고
    • Targeted mutagenesis of Tsix leads to nonrandom X inactivation
    • Lee JT, Lu N. Targeted mutagenesis of Tsix leads to nonrandom X inactivation. Cell. 1999;99(1):47-57.
    • (1999) Cell. , vol.99 , Issue.1 , pp. 47-57
    • Lee, J.T.1    Lu, N.2
  • 161
    • 0032932528 scopus 로고    scopus 로고
    • Tsix, a gene antisense to Xist at the X-inactivation centre
    • Lee JT, Davidow LS, Warshawsky D. Tsix, a gene antisense to Xist at the X-inactivation centre. Nat Genet. 1999; 21(4):400-404.
    • (1999) Nat Genet. , vol.21 , Issue.4 , pp. 400-404
    • Lee, J.T.1    Davidow, L.S.2    Warshawsky, D.3
  • 162
    • 21344460496 scopus 로고    scopus 로고
    • Tsix silences Xist through modification of chromatin structure
    • Sado T, Hoki Y, Sasaki H. Tsix silences Xist through modification of chromatin structure. Dev Cell. 2005;9(1):159-165.
    • (2005) Dev Cell. , vol.9 , Issue.1 , pp. 159-165
    • Sado, T.1    Hoki, Y.2    Sasaki, H.3
  • 163
    • 45549098196 scopus 로고    scopus 로고
    • Intersection of the RNA interference and X-inactivation pathways
    • Ogawa Y, Sun BK, Lee JT. Intersection of the RNA interference and X-inactivation pathways. Science. 2008; 320(5881):1336-1341.
    • (2008) Science. , vol.320 , Issue.5881 , pp. 1336-1341
    • Ogawa, Y.1    Sun, B.K.2    Lee, J.T.3
  • 164
    • 77958472025 scopus 로고    scopus 로고
    • The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation
    • Tian D, Sun S, Lee JT. The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation. Cell. 2010;143(3):390-403.
    • (2010) Cell. , vol.143 , Issue.3 , pp. 390-403
    • Tian, D.1    Sun, S.2    Lee, J.T.3
  • 166
    • 84867163018 scopus 로고    scopus 로고
    • Spreading of X chromosome inactivation via a hierarchy of defined Polycomb stations
    • Pinter SF, Sadreyev RI, Yildirim E, et al. Spreading of X chromosome inactivation via a hierarchy of defined Polycomb stations. Genome Res. 2012;22(10):1864-1876.
    • (2012) Genome Res. , vol.22 , Issue.10 , pp. 1864-1876
    • Pinter, S.F.1    Sadreyev, R.I.2    Yildirim, E.3
  • 167
    • 0344429906 scopus 로고    scopus 로고
    • MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer
    • Ji P, Diederichs S, Wang W, et al. MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer. Oncogene. 2003;22(39):8031-8041.
    • (2003) Oncogene. , vol.22 , Issue.39 , pp. 8031-8041
    • Ji, P.1    Diederichs, S.2    Wang, W.3
  • 169
    • 77956882723 scopus 로고    scopus 로고
    • A long nuclearretained non-coding RNA regulates synaptogenesis by modulating gene expression
    • Bernard D, Prasanth KV, Tripathi V, et al. A long nuclearretained non-coding RNA regulates synaptogenesis by modulating gene expression. EMBO J. 2010;29(18): 3082-3093.
    • (2010) EMBO J. , vol.29 , Issue.18 , pp. 3082-3093
    • Bernard, D.1    Prasanth, K.V.2    Tripathi, V.3
  • 170
    • 81055140863 scopus 로고    scopus 로고
    • ncRNA- and Pc2 methylationdependent gene relocation between nuclear structures mediates gene activation programs
    • Yang L, Lin C, Liu W, et al. ncRNA- and Pc2 methylationdependent gene relocation between nuclear structures mediates gene activation programs. Cell. 2011;147(4):773- 788.
    • (2011) Cell. , vol.147 , Issue.4 , pp. 773- 788
    • Yang, L.1    Lin, C.2    Liu, W.3
  • 171
    • 77956927823 scopus 로고    scopus 로고
    • The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation
    • Tripathi V, Ellis JD, Shen Z, et al. The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation. Mol Cell. 2010;39(6):925-938.
    • (2010) Mol Cell. , vol.39 , Issue.6 , pp. 925-938
    • Tripathi, V.1    Ellis, J.D.2    Shen, Z.3
  • 172
    • 84876003231 scopus 로고    scopus 로고
    • Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB
    • Tripathi V, Shen Z, Chakraborty A, et al. Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB. PLoS Genet. 2013;9(3):e1003368.
    • (2013) PLoS Genet. , vol.9 , Issue.3
    • Tripathi, V.1    Shen, Z.2    Chakraborty, A.3
  • 173
    • 84864315112 scopus 로고    scopus 로고
    • The lncRNA Malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult
    • Zhang B, Arun G, Mao YS, et al. The lncRNA Malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult. Cell Rep. 2012; 2(1):111-123.
    • (2012) Cell Rep. , vol.2 , Issue.1 , pp. 111-123
    • Zhang, B.1    Arun, G.2    Mao, Y.S.3
  • 174
    • 84861116472 scopus 로고    scopus 로고
    • A resource for the conditional ablation of microRNAs in the mouse
    • Park CY, Jeker LT, Carver-Moore K, et al. A resource for the conditional ablation of microRNAs in the mouse. Cell Rep. 2012;1(4):385-391.
    • (2012) Cell Rep. , vol.1 , Issue.4 , pp. 385-391
    • Park, C.Y.1    Jeker, L.T.2    Carver-Moore, K.3
  • 175
    • 57749121689 scopus 로고    scopus 로고
    • microRNA- 133a regulates cardiomyocyte proliferation and suppresses smooth muscle gene expression in the heart
    • Liu N, Bezprozvannaya S, Williams AH, et al. microRNA- 133a regulates cardiomyocyte proliferation and suppresses smooth muscle gene expression in the heart. Genes Dev. 2008;22(23):3242-3254.
    • (2008) Genes Dev. , vol.22 , Issue.23 , pp. 3242-3254
    • Liu, N.1    Bezprozvannaya, S.2    Williams, A.H.3
  • 176
    • 72149131804 scopus 로고    scopus 로고
    • MicroRNA-206 delays ALS progression and promotes regeneration of neuromuscular synapses in mice
    • Williams AH, Valdez G, Moresi V, et al. MicroRNA-206 delays ALS progression and promotes regeneration of neuromuscular synapses in mice. Science. 2009;326(5959): 1549-1554.
    • (2009) Science. , vol.326 , Issue.5959 , pp. 1549-1554
    • Williams, A.H.1    Valdez, G.2    Moresi, V.3
  • 177
    • 65249173480 scopus 로고    scopus 로고
    • Targeted deletion of miR-182, an abundant retinal microRNA
    • Jin ZB, Hirokawa G, Gui L, et al. Targeted deletion of miR-182, an abundant retinal microRNA. Mol Vis. 2009; 15:523-533.
    • (2009) Mol Vis. , vol.15 , pp. 523-533
    • Jin, Z.B.1    Hirokawa, G.2    Gui, L.3
  • 178
    • 34247589595 scopus 로고    scopus 로고
    • Control of stress-dependent cardiac growth and gene expression by a microRNA
    • van Rooij E, Sutherland LB, Qi X, Richardson JA, Hill J, OlsonEN.Control of stress-dependent cardiac growth and gene expression by a microRNA. Science. 2007; 316(5824):575-579.
    • (2007) Science , vol.316 , Issue.5824 , pp. 575-579
    • van Rooij, E.1    Sutherland, L.B.2    Qi, X.3    Richardson, J.A.4    Hill, J.5    Olson, E.N.6
  • 179
    • 70349202176 scopus 로고    scopus 로고
    • MicroRNA-208a is a regulator of cardiac hypertrophy and conduction in mice
    • Callis TE, Pandya K, Seok HY, et al. MicroRNA-208a is a regulator of cardiac hypertrophy and conduction in mice. J Clin Invest. 2009;119(9):2772-2786.
    • (2009) J Clin Invest. , vol.119 , Issue.9 , pp. 2772-2786
    • Callis, T.E.1    Pandya, K.2    Seok, H.Y.3
  • 180
    • 84873451950 scopus 로고    scopus 로고
    • The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells
    • Gutschner T, Hämmerle M, Eissmann M, et al. The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells. Cancer Res. 2013; 73(3):1180-1189.
    • (2013) Cancer Res. , vol.73 , Issue.3 , pp. 1180-1189
    • Gutschner, T.1    Hämmerle, M.2    Eissmann, M.3
  • 181
    • 77951118936 scopus 로고    scopus 로고
    • Longnon-codingRNA HOTAIR reprograms chromatin state to promote cancer metastasis
    • GuptaRA,Shah N,WangKC,et al.Longnon-codingRNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature. 2010;464(7291):1071-1076.
    • (2010) Nature , vol.464 , Issue.7291 , pp. 1071-1076
    • Gupta, R.A.1    Shah, N.2    Wang, K.C.3
  • 182
    • 80054029971 scopus 로고    scopus 로고
    • Long noncoding RNA HOTAIR regulates polycomb-dependent chromatin modification and is associated with poor prognosis in colorectal cancers
    • Kogo R, Shimamura T, Mimori K, et al. Long noncoding RNA HOTAIR regulates polycomb-dependent chromatin modification and is associated with poor prognosis in colorectal cancers. Cancer Res. 2011;71(20):6320-6326.
    • (2011) Cancer Res. , vol.71 , Issue.20 , pp. 6320-6326
    • Kogo, R.1    Shimamura, T.2    Mimori, K.3
  • 183
    • 84875580744 scopus 로고    scopus 로고
    • Long noncoding RNA HOTAIR is an independent prognostic marker for nasopharyngeal carcinoma progression and survival
    • Nie Y, Liu X, Qu S, Song E, Zou H, Gong C. Long noncoding RNA HOTAIR is an independent prognostic marker for nasopharyngeal carcinoma progression and survival. Cancer Sci. 2013;104(4):458-464.
    • (2013) Cancer Sci. , vol.104 , Issue.4 , pp. 458-464
    • Nie, Y.1    Liu, X.2    Qu, S.3    Song, E.4    Zou, H.5    Gong, C.6
  • 184
    • 84555208731 scopus 로고    scopus 로고
    • Large intervening non-coding RNA HOTAIR is associated with hepatocellular carcinoma progression
    • Geng YJ, Xie SL, Li Q, Ma J, Wang GY. Large intervening non-coding RNA HOTAIR is associated with hepatocellular carcinoma progression. J Int Med Res. 2011;39(6): 2119-2128.
    • (2011) J Int Med Res. , vol.39 , Issue.6 , pp. 2119-2128
    • Geng, Y.J.1    Xie, S.L.2    Li, Q.3    Ma, J.4    Wang, G.Y.5
  • 185
    • 84885740857 scopus 로고    scopus 로고
    • Targeted disruption of Hotair leads to homeotic transformation and gene derepression
    • Li L, Liu B, Wapinski OL, et al. Targeted disruption of Hotair leads to homeotic transformation and gene derepression. Cell Rep. 2013;5(1):3-12.
    • (2013) Cell Rep. , vol.5 , Issue.1 , pp. 3-12
    • Li, L.1    Liu, B.2    Wapinski, O.L.3
  • 186
  • 187
    • 84891757415 scopus 로고    scopus 로고
    • Multiple knockout mouse models reveal lincRNAs are required for life and brain development
    • Sauvageau M, Goff LA, Lodato S, et al. Multiple knockout mouse models reveal lincRNAs are required for life and brain development. Elife. 2013;2:e01749.
    • (2013) Elife. , vol.2
    • Sauvageau, M.1    Goff, L.A.2    Lodato, S.3
  • 188
    • 84890559595 scopus 로고    scopus 로고
    • Long non-coding RNAs: new players in cell differentiation and development
    • Fatica A, Bozzoni I. Long non-coding RNAs: new players in cell differentiation and development. Nat Rev Genet. 2014;15(1):7-21.
    • (2014) Nat Rev Genet. , vol.15 , Issue.1 , pp. 7-21
    • Fatica, A.1    Bozzoni, I.2
  • 189
    • 78649467088 scopus 로고    scopus 로고
    • Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells
    • Loewer S, Cabili MN, Guttman M, et al. Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells. Nat Genet. 2010; 42(12):1113-1117.
    • (2010) Nat Genet. , vol.42 , Issue.12 , pp. 1113-1117
    • Loewer, S.1    Cabili, M.N.2    Guttman, M.3
  • 190
    • 84896385370 scopus 로고    scopus 로고
    • An evolutionarily conserved long noncoding RNA TUNA controls pluripotency and neural lineage commitment
    • Lin N, Chang KY, Li Z, et al. An evolutionarily conserved long noncoding RNA TUNA controls pluripotency and neural lineage commitment. Mol Cell. 2014;53(6):1005-1019.
    • (2014) Mol Cell. , vol.53 , Issue.6 , pp. 1005-1019
    • Lin, N.1    Chang, K.Y.2    Li, Z.3
  • 191
    • 0023913120 scopus 로고
    • The steroid and thyroid hormone receptor superfamily
    • Evans RM. The steroid and thyroid hormone receptor superfamily. Science. 1988;240(4854):889-895.
    • (1988) Science. , vol.240 , Issue.4854 , pp. 889-895
    • Evans, R.M.1
  • 192
    • 0012473279 scopus 로고
    • The nuclear receptor superfamily: the second decade
    • Mangelsdorf DJ, Thummel C, Beato M, et al. The nuclear receptor superfamily: the second decade. Cell. 1995;83(6): 835-839.
    • (1995) Cell. , vol.83 , Issue.6 , pp. 835-839
    • Mangelsdorf, D.J.1    Thummel, C.2    Beato, M.3
  • 193
    • 17744373463 scopus 로고    scopus 로고
    • A subfamily of RNA-bindingDEAD-boxproteins acts as an estrogen receptor alpha coactivator through the N-terminal activation domain (AF-1) with an RNA coactivator, SRA
    • Watanabe M, Yanagisawa J, Kitagawa H, et al. A subfamily of RNA-bindingDEAD-boxproteins acts as an estrogen receptor alpha coactivator through the N-terminal activation domain (AF-1) with an RNA coactivator, SRA. EMBO J. 2001;20(6):1341-1352.
    • (2001) EMBO J. , vol.20 , Issue.6 , pp. 1341-1352
    • Watanabe, M.1    Yanagisawa, J.2    Kitagawa, H.3
  • 194
    • 33847234974 scopus 로고    scopus 로고
    • Pus3p- and Pus1p-dependent pseudouridylation of steroid receptor RNA activator controls a functional switch that regulates nuclear receptor signaling
    • Zhao X, Patton JR, Ghosh SK, Fischel-Ghodsian N, Shen L, Spanjaard RA. Pus3p- and Pus1p-dependent pseudouridylation of steroid receptor RNA activator controls a functional switch that regulates nuclear receptor signaling. Mol Endocrinol. 2007;21(3):686-699.
    • (2007) Mol Endocrinol. , vol.21 , Issue.3 , pp. 686-699
    • Zhao, X.1    Patton, J.R.2    Ghosh, S.K.3    Fischel-Ghodsian, N.4    Shen, L.5    Spanjaard, R.A.6
  • 195
    • 84876244055 scopus 로고    scopus 로고
    • RNA-induced silencing complex (RISC) ProteinsPACT,TRBP, and Dicer are SRA binding nuclear receptor coregulators
    • Redfern AD, Colley SM, Beveridge DJ, et al. RNA-induced silencing complex (RISC) ProteinsPACT,TRBP, and Dicer are SRA binding nuclear receptor coregulators. Proc Natl Acad Sci U S A. 2013;110(16):6536-6541.
    • (2013) Proc Natl Acad Sci U S A. , vol.110 , Issue.16 , pp. 6536-6541
    • Redfern, A.D.1    Colley, S.M.2    Beveridge, D.J.3
  • 196
    • 0035339146 scopus 로고    scopus 로고
    • Sharp, an inducible cofactor that integrates nuclear receptor repression and activation
    • Shi Y, Downes M, Xie W, et al. Sharp, an inducible cofactor that integrates nuclear receptor repression and activation. Genes Dev. 2001;15(9):1140-1151.
    • (2001) Genes Dev. , vol.15 , Issue.9 , pp. 1140-1151
    • Shi, Y.1    Downes, M.2    Xie, W.3
  • 197
    • 33744541544 scopus 로고    scopus 로고
    • SLIRP, a small SRA binding protein, is a nuclear receptor corepressor
    • Hatchell EC, ColleySM,Beveridge DJ, et al. SLIRP, a small SRA binding protein, is a nuclear receptor corepressor. Mol Cell. 2006;22(5):657-668.
    • (2006) Mol Cell. , vol.22 , Issue.5 , pp. 657-668
    • Hatchell, E.C.1    Colley, S.M.2    Beveridge, D.J.3
  • 198
    • 84877956152 scopus 로고    scopus 로고
    • Unliganded progesterone receptor-mediated targeting of an RNA-containing repressive complex silences a subset of hormone-inducible genes
    • Vicent GP, Nacht AS, Zaurin R, et al. Unliganded progesterone receptor-mediated targeting of an RNA-containing repressive complex silences a subset of hormone-inducible genes. Genes Dev. 2013;27(10):1179-1197.
    • (2013) Genes Dev. , vol.27 , Issue.10 , pp. 1179-1197
    • Vicent, G.P.1    Nacht, A.S.2    Zaurin, R.3
  • 199
    • 4344573761 scopus 로고    scopus 로고
    • Regulation of nuclear receptor activity by a pseudouridine synthase through posttranscriptional modification of steroid receptor RNA activator
    • Zhao X, Patton JR, Davis SL, Florence B, Ames SJ, SpanjaardRA. Regulation of nuclear receptor activity by a pseudouridine synthase through posttranscriptional modification of steroid receptor RNA activator. Mol Cell. 2004; 15(4):549-558.
    • (2004) Mol Cell. , vol.15 , Issue.4 , pp. 549-558
    • Zhao, X.1    Patton, J.R.2    Davis, S.L.3    Florence, B.4    Ames, S.J.5    Spanjaard, R.A.6
  • 200
    • 79551502404 scopus 로고    scopus 로고
    • Steroid receptor RNA activator protein binds to and counteracts SRA RNA-mediated activation of MyoD and muscle differentiation
    • Hubé F, Velasco G, Rollin J, Furling D, Francastel C. Steroid receptor RNA activator protein binds to and counteracts SRA RNA-mediated activation of MyoD and muscle differentiation. Nucleic Acids Res. 2011;39(2):513-525.
    • (2011) Nucleic Acids Res. , vol.39 , Issue.2 , pp. 513-525
    • Hubé, F.1    Velasco, G.2    Rollin, J.3    Furling, D.4    Francastel, C.5
  • 201
    • 34548605504 scopus 로고    scopus 로고
    • Steroid receptorRNAactivator (SRA1): unusual bifaceted gene products with suspected relevance to breast cancer
    • Leygue E. Steroid receptorRNAactivator (SRA1): unusual bifaceted gene products with suspected relevance to breast cancer. Nucl Recept Signal. 2007;5:e006.
    • (2007) Nucl Recept Signal. , vol.5
    • Leygue, E.1
  • 202
    • 31544446078 scopus 로고    scopus 로고
    • The steroid receptor RNA activator protein is expressed in breast tumor tissues
    • Chooniedass-Kothari S, Hamedani MK, Troup S, Hubé F, Leygue E. The steroid receptor RNA activator protein is expressed in breast tumor tissues. Int J Cancer. 2006; 118(4):1054-1059.
    • (2006) Int J Cancer. , vol.118 , Issue.4 , pp. 1054-1059
    • Chooniedass-Kothari, S.1    Hamedani, M.K.2    Troup, S.3    Hubé, F.4    Leygue, E.5
  • 203
    • 67949094334 scopus 로고    scopus 로고
    • Increasing the relative expression of endogenous non-coding Steroid ReceptorRNA Activator (SRA) in human breast cancer cells using modified oligonucleotides
    • Cooper C, Guo J, Yan Y, et al. Increasing the relative expression of endogenous non-coding Steroid ReceptorRNA Activator (SRA) in human breast cancer cells using modified oligonucleotides. Nucleic Acids Res. 2009;37(13): 4518-4531.
    • (2009) Nucleic Acids Res. , vol.37 , Issue.13 , pp. 4518-4531
    • Cooper, C.1    Guo, J.2    Yan, Y.3
  • 204
    • 77951638287 scopus 로고    scopus 로고
    • Noncoding RNA gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor
    • Kino T, Hurt DE, Ichijo T, Nader N, Chrousos GP. Noncoding RNA gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor. Sci Signal. 2010;3(107):ra8.
    • (2010) Sci Signal. , vol.3 , Issue.107
    • Kino, T.1    Hurt, D.E.2    Ichijo, T.3    Nader, N.4    Chrousos, G.P.5
  • 205
    • 79953184710 scopus 로고    scopus 로고
    • A critical role for non-coding RNA GAS5 in growth arrest and rapamycin inhibition in human T-lymphocytes
    • Williams GT, Mourtada-Maarabouni M, Farzaneh F. A critical role for non-coding RNA GAS5 in growth arrest and rapamycin inhibition in human T-lymphocytes. Biochem Soc Trans. 2011;39(2):482-486.
    • (2011) Biochem Soc Trans. , vol.39 , Issue.2 , pp. 482-486
    • Williams, G.T.1    Mourtada-Maarabouni, M.2    Farzaneh, F.3
  • 206
    • 58249098615 scopus 로고    scopus 로고
    • GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer
    • Mourtada-Maarabouni M, Pickard MR, Hedge VL, Farzaneh F, Williams GT. GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer. Oncogene. 2009;28(2):195-208.
    • (2009) Oncogene. , vol.28 , Issue.2 , pp. 195-208
    • Mourtada-Maarabouni, M.1    Pickard, M.R.2    Hedge, V.L.3    Farzaneh, F.4    Williams, G.T.5
  • 207
    • 49449117338 scopus 로고    scopus 로고
    • Antisense transcripts are targets for activating small RNAs
    • Schwartz JC, Younger ST, Nguyen NB, et al. Antisense transcripts are targets for activating small RNAs. Nat Struct Mol Biol. 2008;15(8):842-848.
    • (2008) Nat Struct Mol Biol. , vol.15 , Issue.8 , pp. 842-848
    • Schwartz, J.C.1    Younger, S.T.2    Nguyen, N.B.3
  • 209
    • 78649400666 scopus 로고    scopus 로고
    • Minireview: Switching on progesterone receptor expression with duplex RNA
    • Janowski BA, Corey DR. Minireview: Switching on progesterone receptor expression with duplex RNA. Mol Endocrinol. 2010;24(12):2243-2252.
    • (2010) Mol Endocrinol. , vol.24 , Issue.12 , pp. 2243-2252
    • Janowski, B.A.1    Corey, D.R.2
  • 210
    • 84883132550 scopus 로고    scopus 로고
    • lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs
    • Yang L, Lin C, Jin C, et al. lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs. Nature. 2013;500(7464):598-602.
    • (2013) Nature. , vol.500 , Issue.7464 , pp. 598-602
    • Yang, L.1    Lin, C.2    Jin, C.3
  • 211
    • 84904268650 scopus 로고    scopus 로고
    • The IncRNAs PCGEM1 and PRNCR1 are not implicated in castration resistant prostate cancer
    • Prensner JR, Sahu A, Iyer MK, et al. The IncRNAs PCGEM1 and PRNCR1 are not implicated in castration resistant prostate cancer. Oncotarget. 2014;5(6):1434-1438.
    • (2014) Oncotarget. , vol.5 , Issue.6 , pp. 1434-1438
    • Prensner, J.R.1    Sahu, A.2    Iyer, M.K.3
  • 214
    • 84881171344 scopus 로고    scopus 로고
    • Enhancer transcripts mark active estrogen receptor binding sites
    • Hah N, Murakami S, Nagari A, Danko CG, Kraus WL. Enhancer transcripts mark active estrogen receptor binding sites. Genome Res. 2013;23(8):1210-1223.
    • (2013) Genome Res. , vol.23 , Issue.8 , pp. 1210-1223
    • Hah, N.1    Murakami, S.2    Nagari, A.3    Danko, C.G.4    Kraus, W.L.5
  • 215
    • 84879695128 scopus 로고    scopus 로고
    • Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation
    • Li W, Notani D, Ma Q, et al. Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation. Nature. 2013;498(7455):516-520.
    • (2013) Nature. , vol.498 , Issue.7455 , pp. 516-520
    • Li, W.1    Notani, D.2    Ma, Q.3
  • 216
    • 84893046921 scopus 로고    scopus 로고
    • Enhancer RNAs: the new molecules of transcription
    • Lai F, Shiekhattar R. Enhancer RNAs: the new molecules of transcription. Curr Opin Genet Dev. 2014;25:38-42.
    • (2014) Curr Opin Genet Dev. , vol.25 , pp. 38-42
    • Lai, F.1    Shiekhattar, R.2
  • 217
    • 25844455649 scopus 로고    scopus 로고
    • Key stages of mammary gland development: molecular mechanisms involved in the formation of the embryonic mammary gland
    • Hens JR, Wysolmerski JJ. Key stages of mammary gland development: molecular mechanisms involved in the formation of the embryonic mammary gland. Breast Cancer Res. 2005;7(5):220-224.
    • (2005) Breast Cancer Res. , vol.7 , Issue.5 , pp. 220-224
    • Hens, J.R.1    Wysolmerski, J.J.2
  • 220
    • 0141864373 scopus 로고    scopus 로고
    • Steroid receptor RNA activator stimulates proliferation as well as apoptosis in vivo
    • Lanz RB, Chua SS, Barron N, Söder BM, DeMayo F, O'Malley BW. Steroid receptor RNA activator stimulates proliferation as well as apoptosis in vivo. Mol Cell Biol. 2003;23(20):7163-7176.
    • (2003) Mol Cell Biol. , vol.23 , Issue.20 , pp. 7163-7176
    • Lanz, R.B.1    Chua, S.S.2    Barron, N.3    Söder, B.M.4    De Mayo, F.5    O'Malley, B.W.6
  • 221
    • 33645823589 scopus 로고    scopus 로고
    • A noncoding RNA is a potential marker of cell fate during mammary gland development
    • Ginger MR, Shore AN, Contreras A, et al. A noncoding RNA is a potential marker of cell fate during mammary gland development. Proc Natl Acad Sci U S A. 2006; 103(15):5781-5786.
    • (2006) Proc Natl Acad Sci U S A. , vol.103 , Issue.15 , pp. 5781-5786
    • Ginger, M.R.1    Shore, A.N.2    Contreras, A.3
  • 222
    • 84864607981 scopus 로고    scopus 로고
    • Pregnancyinduced noncoding RNA (PINC) associates with polycomb repressive complex 2 and regulates mammary epithelial differentiation
    • Shore AN, Kabotyanski EB, Roarty K, et al. Pregnancyinduced noncoding RNA (PINC) associates with polycomb repressive complex 2 and regulates mammary epithelial differentiation. PLoS Genet. 2012;8(7):e1002840.
    • (2012) PLoS Genet. , vol.8 , Issue.7
    • Shore, A.N.1    Kabotyanski, E.B.2    Roarty, K.3
  • 223
    • 79955005458 scopus 로고    scopus 로고
    • SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer
    • Askarian-Amiri ME, Crawford J, French JD, et al. SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer.RNA. 2011;17(5):878-891.
    • (2011) RNA , vol.17 , Issue.5 , pp. 878-891
    • Askarian-Amiri, M.E.1    Crawford, J.2    French, J.D.3
  • 224
    • 0034751523 scopus 로고    scopus 로고
    • Persistent changes in gene expression induced by estrogen and progesterone in the rat mammary gland
    • Ginger MR, Gonzalez-Rimbau MF, Gay JP, Rosen JM. Persistent changes in gene expression induced by estrogen and progesterone in the rat mammary gland. Mol Endocrinol. 2001;15(11):1993-2009.
    • (2001) Mol Endocrinol. , vol.15 , Issue.11 , pp. 1993-2009
    • Ginger, M.R.1    Gonzalez-Rimbau, M.F.2    Gay, J.P.3    Rosen, J.M.4
  • 225
    • 0034987715 scopus 로고    scopus 로고
    • The adipocyte: a model for integration of endocrine and metabolic signaling in energy metabolism regulation
    • Frühbeck G, Gómez-Ambrosi J, Muruzábal FJ, Burrell MA. The adipocyte: a model for integration of endocrine and metabolic signaling in energy metabolism regulation. Am J Physiol Endocrinol Metab. 2001;280(6):E827-847.
    • (2001) Am J Physiol Endocrinol Metab. , vol.280 , Issue.6 , pp. E827-E847
    • Frühbeck, G.1    Gómez-Ambrosi, J.2    Muruzábal, F.J.3    Burrell, M.A.4
  • 227
    • 52049103091 scopus 로고    scopus 로고
    • Pancreas islets in metabolic signaling-focus on the beta-cell
    • Suckale J, Solimena M. Pancreas islets in metabolic signaling-focus on the beta-cell. Front Biosci. 2008;13:7156-7171.
    • (2008) Front Biosci. , vol.13 , pp. 7156-7171
    • Suckale, J.1    Solimena, M.2
  • 228
    • 58049219012 scopus 로고    scopus 로고
    • Adipose tissue dysfunction in obesity, diabetes, and vascular diseases
    • Hajer GR, van Haeften TW, Visseren FL. Adipose tissue dysfunction in obesity, diabetes, and vascular diseases. Eur Heart J. 2008;29(24):2959-2971.
    • (2008) Eur Heart J. , vol.29 , Issue.24 , pp. 2959-2971
    • Hajer, G.R.1    van Haeften, T.W.2    Visseren, F.L.3
  • 229
    • 84879459923 scopus 로고    scopus 로고
    • The pancreatic β cell and type 1 diabetes: innocent bystander or active participant?
    • Soleimanpour SA, Stoffers DA. The pancreatic β cell and type 1 diabetes: innocent bystander or active participant? Trends Endocrinol Metab. 2013;24(7):324-331.
    • (2013) Trends Endocrinol Metab. , vol.24 , Issue.7 , pp. 324-331
    • Soleimanpour, S.A.1    Stoffers, D.A.2
  • 231
    • 58549093915 scopus 로고    scopus 로고
    • Dev Biol of the pancreas: a comprehensive review
    • Gittes GK. Dev Biol of the pancreas: a comprehensive review. Dev Biol. 2009;326(1):4-35.
    • (2009) Dev Biol. , vol.326 , Issue.1 , pp. 4-35
    • Gittes, G.K.1
  • 232
    • 33644749322 scopus 로고    scopus 로고
    • Mechanisms of pancreatic beta-cell death in type 1 and type 2 diabetes: many differences, few similarities
    • CnopM,Welsh N, Jonas JC, Jorns A, Lenzen S, Eizirik DL. Mechanisms of pancreatic beta-cell death in type 1 and type 2 diabetes: many differences, few similarities. Diabetes. 2005;54(Suppl 2):S97-S107.
    • (2005) Diabetes. , vol.54 , pp. S97-S107
    • Cnop, M.1    Welsh, N.2    Jonas, J.C.3    Jorns, A.4    Lenzen, S.5    Eizirik, D.L.6
  • 233
    • 84859524682 scopus 로고    scopus 로고
    • Insulin resistance and type 2 diabetes
    • Taylor R. Insulin resistance and type 2 diabetes. Diabetes. 2012;61(4):778-779.
    • (2012) Diabetes. , vol.61 , Issue.4 , pp. 778-779
    • Taylor, R.1
  • 234
    • 78649955414 scopus 로고    scopus 로고
    • Multiple roles for the noncoding RNA SRA in regulation of adipogenes is and insulin sensitivity
    • Xu B, Gerin I, Miao H, et al. Multiple roles for the noncoding RNA SRA in regulation of adipogenes is and insulin sensitivity. PLoS One. 2010;5(12):e14199.
    • (2010) PLoS One. , vol.5 , Issue.12
    • Xu, B.1    Gerin, I.2    Miao, H.3
  • 235
    • 84900430009 scopus 로고    scopus 로고
    • SRA gene knockout protects against diet-induced obesity and improves glucose tolerance
    • Liu S, Sheng L, Miao H, et al. SRA gene knockout protects against diet-induced obesity and improves glucose tolerance. J Biol Chem. 2014;289(19):13000-13009.
    • (2014) J Biol Chem. , vol.289 , Issue.19 , pp. 13000-13009
    • Liu, S.1    Sheng, L.2    Miao, H.3
  • 237
    • 84884243684 scopus 로고    scopus 로고
    • Knockdown of PU.1 as lncRNA inhibits adipogenesis through enhancing PU.1 mRNA translation
    • Pang WJ, Lin LG, Xiong Y, et al. Knockdown of PU.1 as lncRNA inhibits adipogenesis through enhancing PU.1 mRNA translation. J Cell Biochem. 2013;114(11):2500-2512.
    • (2013) J Cell Biochem. , vol.114 , Issue.11 , pp. 2500-2512
    • Pang, W.J.1    Lin, L.G.2    Xiong, Y.3
  • 238
    • 0028129499 scopus 로고
    • Ectopic expression of the CCAAT/enhancer-binding protein alpha promotes the adipogenic program in a variety of mouse fibroblastic cells
    • Freytag SO, Paielli DL, Gilbert JD. Ectopic expression of the CCAAT/enhancer-binding protein alpha promotes the adipogenic program in a variety of mouse fibroblastic cells. Genes Dev. 1994;8(14):1654-1663.
    • (1994) Genes Dev. , vol.8 , Issue.14 , pp. 1654-1663
    • Freytag, S.O.1    Paielli, D.L.2    Gilbert, J.D.3
  • 239
    • 84905499238 scopus 로고    scopus 로고
    • Along noncoding RNAtranscriptional regulatory circuit drives thermogenic adipocyte differentiation
    • Zhao XY, Li S, Wang GX, Yu Q, Lin JD.Along noncoding RNAtranscriptional regulatory circuit drives thermogenic adipocyte differentiation. Mol Cell. 2014;55(3):372-382.
    • (2014) Mol Cell , vol.55 , Issue.3 , pp. 372-382
    • Zhao, X.Y.1    Li, S.2    Wang, G.X.3    Yu, Q.4    Lin, J.D.5
  • 240
    • 84867070330 scopus 로고    scopus 로고
    • Human β cell transcriptome analysis uncovers lncRNAs that are tissuespecific, dynamically regulated, and abnormally expressed in type 2 diabetes
    • Morán I, Akerman I, van de Bunt M, et al. Human β cell transcriptome analysis uncovers lncRNAs that are tissuespecific, dynamically regulated, and abnormally expressed in type 2 diabetes. Cell Metab. 2012;16(4):435-448.
    • (2012) Cell Metab. , vol.16 , Issue.4 , pp. 435-448
    • Morán, I.1    Akerman, I.2    van de Bunt, M.3
  • 241
  • 242
    • 77958486211 scopus 로고    scopus 로고
    • Paternally inherited microdeletion at 15q11.2 confirms a significant role for the SNORD116 C/D box snoRNA cluster in Prader-Willi syndrome
    • Duker AL, Ballif BC, Bawle EV, et al. Paternally inherited microdeletion at 15q11.2 confirms a significant role for the SNORD116 C/D box snoRNA cluster in Prader-Willi syndrome. Eur J Hum Genet. 2010;18(11):1196-1201.
    • (2010) Eur J Hum Genet. , vol.18 , Issue.11 , pp. 1196-1201
    • Duker, A.L.1    Ballif, B.C.2    Bawle, E.V.3
  • 243
    • 44349191455 scopus 로고    scopus 로고
    • Prader-Willi phenotype caused by paternal deficiency for the HBII-85 C/D box small nucleolar RNA cluster
    • Sahoo T, del Gaudio D, German JR, et al. Prader-Willi phenotype caused by paternal deficiency for the HBII-85 C/D box small nucleolar RNA cluster. Nat Genet. 2008; 40(6):719-721.
    • (2008) Nat Genet. , vol.40 , Issue.6 , pp. 719-721
    • Sahoo, T.1    del Gaudio, D.2    German, J.R.3
  • 244
    • 72449205602 scopus 로고    scopus 로고
    • Long nuclear-retained non-coding RNAs and allele-specific higher-order chromatin organization at imprinted snoRNA gene arrays
    • Vitali P, Royo H, Marty V, Bortolin-Cavaille ML, Cavaille J. Long nuclear-retained non-coding RNAs and allele-specific higher-order chromatin organization at imprinted snoRNA gene arrays. J Cell Sci. 2010;123(Pt 1):70-83.
    • (2010) J Cell Sci. , vol.123 , pp. 70-83
    • Vitali, P.1    Royo, H.2    Marty, V.3    Bortolin-Cavaille, M.L.4    Cavaille, J.5
  • 245
    • 84882766445 scopus 로고    scopus 로고
    • A Prader-Willi locus lncRNA cloud modulates diurnal genes and energy expenditure
    • Powell WT, Coulson RL, Crary FK, et al. A Prader-Willi locus lncRNA cloud modulates diurnal genes and energy expenditure. Hum Mol Genet. 2013;22(21):4318-4328.
    • (2013) Hum Mol Genet. , vol.22 , Issue.21 , pp. 4318-4328
    • Powell, W.T.1    Coulson, R.L.2    Crary, F.K.3
  • 246
    • 84901638082 scopus 로고    scopus 로고
    • The noncodingRNAIPW regulates the imprinted DLK1-DIO3 locus in an induced pluripotent stem cell model of Prader- Willi syndrome
    • Stelzer Y, Sagi I, Yanuka O, Eiges R, Benvenisty N. The noncodingRNAIPW regulates the imprinted DLK1-DIO3 locus in an induced pluripotent stem cell model of Prader- Willi syndrome. Nat Genet. 2014;46(6):551-557.
    • (2014) Nat Genet. , vol.46 , Issue.6 , pp. 551-557
    • Stelzer, Y.1    Sagi, I.2    Yanuka, O.3    Eiges, R.4    Benvenisty, N.5
  • 247
    • 76749098737 scopus 로고    scopus 로고
    • Overview of the immune response
    • Chaplin DD. Overview of the immune response. J Allergy Clin Immunol. 2010;125(2 Suppl 2):S3-S23.
    • (2010) J Allergy Clin Immunol. , vol.125 , Issue.2 , pp. S3-S23
    • Chaplin, D.D.1
  • 249
    • 47949107183 scopus 로고    scopus 로고
    • The development of allergic inflammation
    • Galli SJ, Tsai M, Piliponsky AM. The development of allergic inflammation. Nature. 2008;454(7203):445-454.
    • (2008) Nature. , vol.454 , Issue.7203 , pp. 445-454
    • Galli, S.J.1    Tsai, M.2    Piliponsky, A.M.3
  • 251
    • 67650709487 scopus 로고    scopus 로고
    • Recent advances in the genetics of autoimmune disease
    • Gregersen PK, Olsson LM. Recent advances in the genetics of autoimmune disease. Annu Rev Immunol. 2009;27: 363-391.
    • (2009) Annu Rev Immunol. , vol.27 , pp. 363-391
    • Gregersen, P.K.1    Olsson, L.M.2
  • 252
    • 79952137666 scopus 로고    scopus 로고
    • Unique signatures of long noncoding RNA expression in response to virus infection and altered innate immune signaling
    • Peng X, Gralinski L, Armour CD, et al. Unique signatures of long noncoding RNA expression in response to virus infection and altered innate immune signaling. MBio. 2010;1(5):e00206-10.
    • (2010) MBio. , vol.1 , Issue.5 , pp. e00206-e00210
    • Peng, X.1    Gralinski, L.2    Armour, C.D.3
  • 253
    • 84881478367 scopus 로고    scopus 로고
    • A long noncoding RNA mediates both activation and repression of immune response genes
    • Carpenter S, Aiello D, Atianand MK, et al. A long noncoding RNA mediates both activation and repression of immune response genes. Science. 2013;341(6147):789-792.
    • (2013) Science. , vol.341 , Issue.6147 , pp. 789-792
    • Carpenter, S.1    Aiello, D.2    Atianand, M.K.3
  • 254
    • 84880748598 scopus 로고    scopus 로고
    • A mammalian pseudogene lncRNA at the interface of inflammation and anti-inflammatory therapeutics
    • Rapicavoli NA, Qu K, Zhang J, Mikhail M, Laberge RM, Chang HY. A mammalian pseudogene lncRNA at the interface of inflammation and anti-inflammatory therapeutics. Elife. 2013;2:e00762.
    • (2013) Elife. , vol.2
    • Rapicavoli, N.A.1    Qu, K.2    Zhang, J.3    Mikhail, M.4    Laberge, R.M.5    Chang, H.Y.6
  • 255
    • 84893452948 scopus 로고    scopus 로고
    • Long Noncoding RNA NEAT1-Dependent SFPQ Relocation from Promoter Region to Paraspeckle Mediates IL8 Expression upon Immune Stimuli
    • Imamura K, Imamachi N, Akizuki G, et al. Long Noncoding RNA NEAT1-Dependent SFPQ Relocation from Promoter Region to Paraspeckle Mediates IL8 Expression upon Immune Stimuli. Mol Cell. 2014;53(3):393-406.
    • (2014) Mol Cell. , vol.53 , Issue.3 , pp. 393-406
    • Imamura, K.1    Imamachi, N.2    Akizuki, G.3
  • 257
    • 84886724189 scopus 로고    scopus 로고
    • Expression and regulation of intergenic long noncoding RNAs during T cell development and differentiation
    • Hu G, Tang Q, Sharma S, et al. Expression and regulation of intergenic long noncoding RNAs during T cell development and differentiation. Nat Immunol. 2013;14(11): 1190-1198.
    • (2013) Nat Immunol. , vol.14 , Issue.11 , pp. 1190-1198
    • Hu, G.1    Tang, Q.2    Sharma, S.3
  • 258
    • 84874025014 scopus 로고    scopus 로고
    • The NeST long ncRNAcontrols microbial susceptibility and epigenetic activation of the interferon-γ locus
    • Gomez JA, Wapinski OL, Yang YW, et al. The NeST long ncRNAcontrols microbial susceptibility and epigenetic activation of the interferon-γ locus. Cell. 2013;152(4):743-754.
    • (2013) Cell. , vol.152 , Issue.4 , pp. 743-754
    • Gomez, J.A.1    Wapinski, O.L.2    Yang, Y.W.3
  • 259
    • 0038371368 scopus 로고    scopus 로고
    • Tmevpg1, a candidate gene for the control of Theiler's virus persistence, could be implicated in the regulation of gamma interferon
    • Vigneau S, Rohrlich PS, Brahic M, Bureau JF. Tmevpg1, a candidate gene for the control of Theiler's virus persistence, could be implicated in the regulation of gamma interferon. J Virol. 2003;77(10):5632-5638.
    • (2003) J Virol. , vol.77 , Issue.10 , pp. 5632-5638
    • Vigneau, S.1    Rohrlich, P.S.2    Brahic, M.3    Bureau, J.F.4
  • 260
    • 84899486799 scopus 로고    scopus 로고
    • The STAT3-binding long noncoding RNA lnc-DC controls human dendritic cell differentiation
    • Wang P, Xue Y, Han Y, et al. The STAT3-binding long noncoding RNA lnc-DC controls human dendritic cell differentiation. Science. 2014;344(6181):310-313.
    • (2014) Science. , vol.344 , Issue.6181 , pp. 310-313
    • Wang, P.1    Xue, Y.2    Han, Y.3
  • 262
    • 80051898233 scopus 로고    scopus 로고
    • A transcriptomic atlas of mouse neocortical layers
    • Belgard TG, Marques AC, Oliver PL, et al. A transcriptomic atlas of mouse neocortical layers. Neuron. 2011; 71(4):605-616.
    • (2011) Neuron. , vol.71 , Issue.4 , pp. 605-616
    • Belgard, T.G.1    Marques, A.C.2    Oliver, P.L.3
  • 263
    • 34249724360 scopus 로고    scopus 로고
    • Noncoding RNAs and RNA editing in brain development, functional diversification, and neurological disease
    • Mehler MF, Mattick JS. Noncoding RNAs and RNA editing in brain development, functional diversification, and neurological disease. Physiol Rev. 2007;87(3):799-823.
    • (2007) Physiol Rev. , vol.87 , Issue.3 , pp. 799-823
    • Mehler, M.F.1    Mattick, J.S.2
  • 264
    • 77952581350 scopus 로고    scopus 로고
    • Long non-coding RNAs in nervous system function and disease
    • Qureshi IA, Mattick JS, Mehler MF. Long non-coding RNAs in nervous system function and disease. Brain Res. 2010;1338:20-35.
    • (2010) Brain Res. , vol.1338 , pp. 20-35
    • Qureshi, I.A.1    Mattick, J.S.2    Mehler, M.F.3
  • 265
    • 84863489478 scopus 로고    scopus 로고
    • Involvement of long noncoding RNAs in diseases affecting the central nervous system
    • Pastori C, Wahlestedt C. Involvement of long noncoding RNAs in diseases affecting the central nervous system. RNA Biol. 2012;9(6):860-870.
    • (2012) RNA Biol. , vol.9 , Issue.6 , pp. 860-870
    • Pastori, C.1    Wahlestedt, C.2
  • 266
    • 84880963657 scopus 로고    scopus 로고
    • Long noncoding RNAs in development and disease of the central nervous system
    • NgSY, Lin L, Soh BS, Stanton LW. Long noncoding RNAs in development and disease of the central nervous system. Trends Genet. 2013;29(8):461-468.
    • (2013) Trends Genet. , vol.29 , Issue.8 , pp. 461-468
    • Ng, S.Y.1    Lin, L.2    Soh, B.S.3    Stanton, L.W.4
  • 267
    • 84866947025 scopus 로고    scopus 로고
    • Emerging roles for long non-coding RNAs in cancer and neurological disorders
    • NilandCN,Merry CR, KhalilAM.Emerging roles for long non-coding RNAs in cancer and neurological disorders. Front Genet. 2012;3:25.
    • (2012) Front Genet , vol.3 , pp. 25
    • Niland, C.N.1    Merry, C.R.2    Khalil, A.M.3
  • 268
    • 84877575447 scopus 로고    scopus 로고
    • Integration of genomewide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo
    • RamosAD,Diaz A, Nellore A, et al. Integration of genomewide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo. Cell Stem Cell. 2013;12(5): 616-628.
    • (2013) Cell Stem Cell. , vol.12 , Issue.5 , pp. 616-628
    • Ramos, A.D.1    Diaz, A.2    Nellore, A.3
  • 269
    • 84890567188 scopus 로고    scopus 로고
    • Transcriptome sequencing during mouse brain development identifies long non-coding RNAs functionally involved in neurogenic commitment
    • Aprea J, Prenninger S, Dori M, et al. Transcriptome sequencing during mouse brain development identifies long non-coding RNAs functionally involved in neurogenic commitment. EMBO J. 2013;32(24):3145-3160.
    • (2013) EMBO J. , vol.32 , Issue.24 , pp. 3145-3160
    • Aprea, J.1    Prenninger, S.2    Dori, M.3
  • 270
    • 84881487023 scopus 로고    scopus 로고
    • The long noncoding RNA RMST interacts with SOX2 to regulate neurogenesis
    • Ng SY, Bogu GK, Soh BS, Stanton LW. The long noncoding RNA RMST interacts with SOX2 to regulate neurogenesis. Mol Cell. 2013;51(3):349-359.
    • (2013) Mol Cell. , vol.51 , Issue.3 , pp. 349-359
    • Ng, S.Y.1    Bogu, G.K.2    Soh, B.S.3    Stanton, L.W.4
  • 271
    • 84867648038 scopus 로고    scopus 로고
    • A noncoding RNA regulates the neurogenin1 gene locus during mouse neocortical development
    • Onoguchi M, Hirabayashi Y, Koseki H, Gotoh Y. A noncoding RNA regulates the neurogenin1 gene locus during mouse neocortical development. Proc Natl Acad SciUSA. 2012;109(42):16939-16944.
    • (2012) Proc Natl Acad SciUSA. , vol.109 , Issue.42 , pp. 16939-16944
    • Onoguchi, M.1    Hirabayashi, Y.2    Koseki, H.3    Gotoh, Y.4
  • 272
    • 15744387853 scopus 로고    scopus 로고
    • The noncoding RNA taurine upregulated gene 1 is required for differentiation of the murine retina
    • Young TL, Matsuda T, Cepko CL. The noncoding RNA taurine upregulated gene 1 is required for differentiation of the murine retina. Curr Biol. 2005;15(6):501-512.
    • (2005) Curr Biol. , vol.15 , Issue.6 , pp. 501-512
    • Young, T.L.1    Matsuda, T.2    Cepko, C.L.3
  • 273
    • 80053172782 scopus 로고    scopus 로고
    • The long noncoding RNA Six3OS acts in trans to regulate retinal development by modulating Six3 activity
    • Rapicavoli NA, Poth EM, Zhu H, Blackshaw S. The long noncoding RNA Six3OS acts in trans to regulate retinal development by modulating Six3 activity. Neural Dev. 2011;6:32.
    • (2011) Neural Dev. , vol.6 , pp. 32
    • Rapicavoli, N.A.1    Poth, E.M.2    Zhu, H.3    Blackshaw, S.4
  • 274
    • 77951945884 scopus 로고    scopus 로고
    • The long noncoding RNA RNCR2 directs mouse retinal cell specification
    • Rapicavoli NA, Poth EM, Blackshaw S. The long noncoding RNA RNCR2 directs mouse retinal cell specification. BMC Dev Biol. 2010;10:49.
    • (2010) BMC Dev Biol. , vol.10 , pp. 49
    • Rapicavoli, N.A.1    Poth, E.M.2    Blackshaw, S.3
  • 275
    • 84055212187 scopus 로고    scopus 로고
    • The long noncoding RNA Vax2os1 controls the cell cycle progression of photoreceptor progenitors in the mouse retina
    • Meola N, PizzoM,Alfano G, SuraceEM,Banfi S. The long noncoding RNA Vax2os1 controls the cell cycle progression of photoreceptor progenitors in the mouse retina. RNA. 2012;18(1):111-123.
    • (2012) RNA. , vol.18 , Issue.1 , pp. 111-123
    • Meola, N.1    Pizzo, M.2    Alfano, G.3    Surace, E.M.4    Banfi, S.5
  • 276
    • 76649122999 scopus 로고    scopus 로고
    • Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation
    • Mercer TR, Qureshi IA, Gokhan S, et al. Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation. BMC Neurosci. 2010;11:14.
    • (2010) BMC Neurosci. , vol.11 , pp. 14
    • Mercer, T.R.1    Qureshi, I.A.2    Gokhan, S.3
  • 277
    • 0036796883 scopus 로고    scopus 로고
    • Developmental functions of the Distal-less/Dlx homeobox genes
    • Panganiban G, Rubenstein JL. Developmental functions of the Distal-less/Dlx homeobox genes. Development. 2002; 129(19):4371-4386.
    • (2002) Development. , vol.129 , Issue.19 , pp. 4371-4386
    • Panganiban, G.1    Rubenstein, J.L.2
  • 278
    • 33744804277 scopus 로고    scopus 로고
    • The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator
    • Feng J, Bi C, Clark BS, Mady R, Shah P, Kohtz JD. The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator. Genes Dev. 2006;20(11):1470-1484.
    • (2006) Genes Dev. , vol.20 , Issue.11 , pp. 1470-1484
    • Feng, J.1    Bi, C.2    Clark, B.S.3    Mady, R.4    Shah, P.5    Kohtz, J.D.6
  • 279
    • 68149182666 scopus 로고    scopus 로고
    • Balanced gene regulation by an embryonic brain ncRNA is critical for adult hippocampal GABA circuitry
    • Bond AM, Vangompel MJ, Sametsky EA, et al. Balanced gene regulation by an embryonic brain ncRNA is critical for adult hippocampal GABA circuitry. Nat Neurosci. 2009;12(8):1020-1027.
    • (2009) Nat Neurosci. , vol.12 , Issue.8 , pp. 1020-1027
    • Bond, A.M.1    Vangompel, M.J.2    Sametsky, E.A.3
  • 280
    • 46749083733 scopus 로고    scopus 로고
    • Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase
    • Faghihi MA, Modarresi F, Khalil AM, et al. Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase. Nat Med. 2008;14(7):723-730.
    • (2008) Nat Med. , vol.14 , Issue.7 , pp. 723-730
    • Faghihi, M.A.1    Modarresi, F.2    Khalil, A.M.3
  • 281
    • 78049525220 scopus 로고    scopus 로고
    • BDNF overexpression in the forebrain rescues Huntington's disease phenotypes in YAC128 mice
    • Xie Y, Hayden MR, Xu B. BDNF overexpression in the forebrain rescues Huntington's disease phenotypes in YAC128 mice. J Neurosci. 2010;30(44):14708-14718.
    • (2010) J Neurosci. , vol.30 , Issue.44 , pp. 14708-14718
    • Xie, Y.1    Hayden, M.R.2    Xu, B.3
  • 282
    • 84860353437 scopus 로고    scopus 로고
    • Inhibition of natural antisense transcripts in vivo results in gene-specific transcriptional upregulation
    • Modarresi F, Faghihi MA, Lopez-Toledano MA, et al. Inhibition of natural antisense transcripts in vivo results in gene-specific transcriptional upregulation. Nat Biotechnol. 2012;30(5):453-459.
    • (2012) Nat Biotechnol. , vol.30 , Issue.5 , pp. 453-459
    • Modarresi, F.1    Faghihi, M.A.2    Lopez-Toledano, M.A.3
  • 283
    • 0242432463 scopus 로고    scopus 로고
    • Neurons but not glial cells show reciprocal imprinting of sense and antisense transcripts of Ube3a
    • Yamasaki K, Joh K, Ohta T, et al. Neurons but not glial cells show reciprocal imprinting of sense and antisense transcripts of Ube3a. Hum Mol Genet. 2003;12(8):837-847.
    • (2003) Hum Mol Genet. , vol.12 , Issue.8 , pp. 837-847
    • Yamasaki, K.1    Joh, K.2    Ohta, T.3
  • 284
    • 0031031570 scopus 로고    scopus 로고
    • De novo truncating mutations in E6-AP ubiquitin-protein ligase gene (UBE3A) in Angelman syndrome
    • Matsuura T, Sutcliffe JS, Fang P, et al. De novo truncating mutations in E6-AP ubiquitin-protein ligase gene (UBE3A) in Angelman syndrome. Nat Genet. 1997;15(1):74-77.
    • (1997) Nat Genet. , vol.15 , Issue.1 , pp. 74-77
    • Matsuura, T.1    Sutcliffe, J.S.2    Fang, P.3
  • 285
    • 77955406842 scopus 로고    scopus 로고
    • Angelman syndrome, a genomic imprinting disorder of the brain
    • Chamberlain SJ, Lalande M. Angelman syndrome, a genomic imprinting disorder of the brain. J Neurosci. 2010;30(30):9958-9963.
    • (2010) J Neurosci. , vol.30 , Issue.30 , pp. 9958-9963
    • Chamberlain, S.J.1    Lalande, M.2
  • 287
    • 84863505435 scopus 로고    scopus 로고
    • Ube3a-ATS is an atypical RNA polymerase II transcript that represses the paternal expression of Ube3a
    • Meng L, Person RE, Beaudet AL. Ube3a-ATS is an atypical RNA polymerase II transcript that represses the paternal expression of Ube3a. Hum Mol Genet. 2012;21(13): 3001-3012.
    • (2012) Hum Mol Genet. , vol.21 , Issue.13 , pp. 3001-3012
    • Meng, L.1    Person, R.E.2    Beaudet, A.L.3
  • 288
  • 289
    • 36248967098 scopus 로고    scopus 로고
    • An antisense transcript spanning the CGG repeat region of FMR1 is upregulated in premutation carriers but silenced in full mutation individuals
    • Ladd PD, Smith LE, Rabaia NA, et al. An antisense transcript spanning the CGG repeat region of FMR1 is upregulated in premutation carriers but silenced in full mutation individuals. Hum Mol Genet. 2007;16(24):3174-3187.
    • (2007) Hum Mol Genet. , vol.16 , Issue.24 , pp. 3174-3187
    • Ladd, P.D.1    Smith, L.E.2    Rabaia, N.A.3
  • 290
    • 79959306523 scopus 로고    scopus 로고
    • CTCF regulates ataxin-7 expression through promotion of a convergently transcribed, antisense noncoding RNA
    • Sopher BL, Ladd PD, Pineda VV, et al. CTCF regulates ataxin-7 expression through promotion of a convergently transcribed, antisense noncoding RNA. Neuron. 2011; 70(6):1071-1084.
    • (2011) Neuron. , vol.70 , Issue.6 , pp. 1071-1084
    • Sopher, B.L.1    Ladd, P.D.2    Pineda, V.V.3
  • 291
    • 33745545413 scopus 로고    scopus 로고
    • Bidirectional expression of CUG and CAG expansion transcripts and intranuclear polyglutamine inclusions in spinocerebellar ataxia type 8
    • Moseley ML, Zu T, Ikeda Y, et al. Bidirectional expression of CUG and CAG expansion transcripts and intranuclear polyglutamine inclusions in spinocerebellar ataxia type 8. Nat Genet. 2006;38(7):758-769.
    • (2006) Nat Genet. , vol.38 , Issue.7 , pp. 758-769
    • Moseley, M.L.1    Zu, T.2    Ikeda, Y.3
  • 292
    • 70149112363 scopus 로고    scopus 로고
    • RNA gain-offunction in spinocerebellar ataxia type 8
    • Daughters RS, Tuttle DL, Gao W, et al. RNA gain-offunction in spinocerebellar ataxia type 8. PLoS Genet. 2009;5(8):e1000600.
    • (2009) PLoS Genet. , vol.5 , Issue.8
    • Daughters, R.S.1    Tuttle, D.L.2    Gao, W.3
  • 293
    • 0032900772 scopus 로고    scopus 로고
    • An untranslated CTG expansion causes a novel form of spinocerebellar ataxia (SCA8)
    • Koob MD, Moseley ML, Schut LJ, et al. An untranslated CTG expansion causes a novel form of spinocerebellar ataxia (SCA8). Nat Genet. 1999;21(4):379-384.
    • (1999) Nat Genet. , vol.21 , Issue.4 , pp. 379-384
    • Koob, M.D.1    Moseley, M.L.2    Schut, L.J.3
  • 294
    • 84895556767 scopus 로고    scopus 로고
    • Dynamic reorganization of the AC16 cardiomyocyte transcriptome in response to TNFα signaling revealed by integrated genomic analyses
    • Luo X, Chae M, Krishnakumar R, Danko CG, Kraus WL. Dynamic reorganization of the AC16 cardiomyocyte transcriptome in response to TNFα signaling revealed by integrated genomic analyses.BMCGenomics. 2014;15:155.
    • (2014) BMCGenomics , vol.15 , pp. 155
    • Luo, X.1    Chae, M.2    Krishnakumar, R.3    Danko, C.G.4    Kraus, W.L.5
  • 295
    • 78650696753 scopus 로고    scopus 로고
    • Expression of linear and novel circular forms of an INK4/ARF-associated non-coding RNA correlates with atherosclerosis risk
    • Burd CE, Jeck WR, Liu Y, Sanoff HK, Wang Z, Sharpless NE. Expression of linear and novel circular forms of an INK4/ARF-associated non-coding RNA correlates with atherosclerosis risk. PLoS Genet. 2010;6(12):e1001233.
    • (2010) PLoS Genet. , vol.6 , Issue.12
    • Burd, C.E.1    Jeck, W.R.2    Liu, Y.3    Sanoff, H.K.4    Wang, Z.5    Sharpless, N.E.6
  • 296
    • 61849151975 scopus 로고    scopus 로고
    • HBEGF, SRA1, and IK: Three cosegregating genes as determinants of cardiomyopathy
    • Friedrichs F, Zugck C, Rauch GJ, et al. HBEGF, SRA1, and IK: Three cosegregating genes as determinants of cardiomyopathy. Genome Res. 2009;19(3):395-403.
    • (2009) Genome Res. , vol.19 , Issue.3 , pp. 395-403
    • Friedrichs, F.1    Zugck, C.2    Rauch, G.J.3
  • 297
    • 33751277900 scopus 로고    scopus 로고
    • Identification of a novel non-coding RNA, MIAT, that confers risk of myocardial infarction
    • Ishii N, Ozaki K, Sato H, et al. Identification of a novel non-coding RNA, MIAT, that confers risk of myocardial infarction. J Hum Genet. 2006;51(12):1087-1099.
    • (2006) J Hum Genet. , vol.51 , Issue.12 , pp. 1087-1099
    • Ishii, N.1    Ozaki, K.2    Sato, H.3
  • 298
    • 84908020927 scopus 로고    scopus 로고
    • A long noncoding RNA protects the heart from pathological hypertrophy.
    • HanP, LiW,LinCH,et al.A long noncoding RNA protects the heart from pathological hypertrophy. Nature. 2014; 514(7520):102-106.
    • (2014) Nature , vol.514 , Issue.7520 , pp. 102-106
    • Han, P.1    Li, W.2    Lin, C.H.3
  • 299
    • 84901615929 scopus 로고    scopus 로고
    • Six homeoproteins and a Iinc-RNA at the fast MYHlocus lock fast myofiber terminal phenotype
    • Sakakibara I, Santolini M, Ferry A, Hakim V, Maire P. Six homeoproteins and a Iinc-RNA at the fast MYH locus lock fast myofiber terminal phenotype. PLoS Genet. 2014; 10(5):e1004386.
    • (2014) PLoS Genet. , vol.10 , Issue.5
    • Sakakibara, I.1    Santolini, M.2    Ferry, A.3    Hakim, V.4    Maire, P.5
  • 301
    • 12844269788 scopus 로고    scopus 로고
    • Role of endogenous antisense RNA in cardiac gene regulation
    • Luther HP. Role of endogenous antisense RNA in cardiac gene regulation. J Mol Med (Berl). 2005;83(1):26-32.
    • (2005) J Mol Med (Berl). , vol.83 , Issue.1 , pp. 26-32
    • Luther, H.P.1
  • 302
    • 0033567836 scopus 로고    scopus 로고
    • Remodeling of the hypertrophied human myocardium by cardiac bHLH transcription factors
    • Ritter O, Haase H, Schulte HD, Lange PE, Morano I. Remodeling of the hypertrophied human myocardium by cardiac bHLH transcription factors. J Cell Biochem. 1999; 74(4):551-561.
    • (1999) J Cell Biochem. , vol.74 , Issue.4 , pp. 551-561
    • Ritter, O.1    Haase, H.2    Schulte, H.D.3    Lange, P.E.4    Morano, I.5
  • 303
    • 33749125424 scopus 로고    scopus 로고
    • The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoDand skeletal muscle differentiation
    • Caretti G, Schiltz RL, Dilworth FJ, et al. The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation. Dev Cell. 2006; 11(4):547-560.
    • (2006) Dev Cell. , vol.11 , Issue.4 , pp. 547-560
    • Caretti, G.1    Schiltz, R.L.2    Dilworth, F.J.3
  • 304
    • 84897109560 scopus 로고    scopus 로고
    • Structure and function of steroid receptor RNA activator protein, the proposed partner of SRA noncoding RNA
    • McKay DB, Xi L, Barthel KK, Cech TR. Structure and function of steroid receptor RNA activator protein, the proposed partner of SRA noncoding RNA. J Mol Biol. 2014;426(8):1766-1785.
    • (2014) J Mol Biol. , vol.426 , Issue.8 , pp. 1766-1785
    • McKay, D.B.1    Xi, L.2    Barthel, K.K.3    Cech, T.R.4
  • 305
    • 84896812260 scopus 로고    scopus 로고
    • The H19 long noncoding RNA gives rise to microRNAs miR-675-3p and miR-675-5p to promote skeletal muscle differentiation and regeneration
    • Dey BK, Pfeifer K, Dutta A. The H19 long noncoding RNA gives rise to microRNAs miR-675-3p and miR-675-5p to promote skeletal muscle differentiation and regeneration. Genes Dev. 2014;28(5):491-501.
    • (2014) Genes Dev. , vol.28 , Issue.5 , pp. 491-501
    • Dey, B.K.1    Pfeifer, K.2    Dutta, A.3
  • 306
    • 84893747773 scopus 로고    scopus 로고
    • A feedforward regulatory loop between HuR and the long noncoding RNA linc-MD1 controls early phases of myogenesis
    • Legnini I, Morlando M, Mangiavacchi A, Fatica A, Bozzoni I. A feedforward regulatory loop between HuR and the long noncoding RNA linc-MD1 controls early phases of myogenesis. Mol Cell. 2014;53(3):506-514.
    • (2014) Mol Cell. , vol.53 , Issue.3 , pp. 506-514
    • Legnini, I.1    Morlando, M.2    Mangiavacchi, A.3    Fatica, A.4    Bozzoni, I.5
  • 307
    • 84860885909 scopus 로고    scopus 로고
    • Along ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy
    • Cabianca DS, Casa V, Bodega B, et al.Along ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy. Cell. 2012;149(4): 819-831.
    • (2012) Cell , vol.149 , Issue.4 , pp. 819-831
    • Cabianca, D.S.1    Casa, V.2    Bodega, B.3
  • 308
    • 84880154515 scopus 로고    scopus 로고
    • Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer
    • Du Z, Fei T, Verhaak RG, et al. Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer. Nat Struct Mol Biol. 2013;20(7):908-913.
    • (2013) Nat Struct Mol Biol. , vol.20 , Issue.7 , pp. 908-913
    • Du, Z.1    Fei, T.2    Verhaak, R.G.3
  • 309
    • 84905401266 scopus 로고    scopus 로고
    • Genome-wide mapping and characterization of Notch-regulated long noncoding RNAs in acute leukemia
    • Trimarchi T, Bilal E, Ntziachristos P, et al. Genome-wide mapping and characterization of Notch-regulated long noncoding RNAs in acute leukemia. Cell. 2014;158(3): 593-606.
    • (2014) Cell. , vol.158 , Issue.3 , pp. 593-606
    • Trimarchi, T.1    Bilal, E.2    Ntziachristos, P.3
  • 310
    • 84908671045 scopus 로고    scopus 로고
    • A functional genomic approach identifies FAL1 as an oncogenic long noncoding RNA that associates with BMI1 and represses p21 expression in cancer
    • Hu X, Feng Y, Zhang D, et al. A functional genomic approach identifies FAL1 as an oncogenic long noncoding RNA that associates with BMI1 and represses p21 expression in cancer. Cancer Cell. 2014;26(3):344-357.
    • (2014) Cancer Cell. , vol.26 , Issue.3 , pp. 344-357
    • Hu, X.1    Feng, Y.2    Zhang, D.3
  • 311
    • 79961202865 scopus 로고    scopus 로고
    • Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression
    • Prensner JR, Iyer MK, Balbin OA, et al. Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression. Nat Biotechnol. 2011;29(8):742-749.
    • (2011) Nat Biotechnol. , vol.29 , Issue.8 , pp. 742-749
    • Prensner, J.R.1    Iyer, M.K.2    Balbin, O.A.3
  • 312
    • 84863495094 scopus 로고    scopus 로고
    • The hallmarks of cancer: a long non-coding RNA point of view
    • Gutschner T, Diederichs S. The hallmarks of cancer: a long non-coding RNA point of view. RNA Biol. 2012;9(6): 703-719.
    • (2012) RNA Biol. , vol.9 , Issue.6 , pp. 703-719
    • Gutschner, T.1    Diederichs, S.2
  • 313
    • 84868664680 scopus 로고    scopus 로고
    • A central role for long non-coding RNA in cancer
    • Mitra SA, Mitra AP, Triche TJ. A central role for long non-coding RNA in cancer. Front Genet. 2012;3:17.
    • (2012) Front Genet. , vol.3 , pp. 17
    • Mitra, S.A.1    Mitra, A.P.2    Triche, T.J.3
  • 314
    • 84860119507 scopus 로고    scopus 로고
    • Long non-coding RNAs: versatile master regulators of gene expression and crucial players in cancer
    • Nie L, Wu HJ, Hsu JM, et al. Long non-coding RNAs: versatile master regulators of gene expression and crucial players in cancer. Am J Transl Res. 2012;4(2):127-150.
    • (2012) Am J Transl Res. , vol.4 , Issue.2 , pp. 127-150
    • Nie, L.1    Wu, H.J.2    Hsu, J.M.3
  • 315
    • 78651397147 scopus 로고    scopus 로고
    • Large non-coding RNAs: missing links in cancer?
    • Huarte M, Rinn JL. Large non-coding RNAs: missing links in cancer? Hum Mol Genet. 2010;19(R2):R152-R161.
    • (2010) Hum Mol Genet. , vol.19 , Issue.R2 , pp. R152-R161
    • Huarte, M.1    Rinn, J.L.2
  • 316
    • 33645532828 scopus 로고    scopus 로고
    • Regulation of apoptosis by a prostate-specific and prostate cancer-associated noncoding gene, PCGEM1
    • Fu X, Ravindranath L, Tran N, Petrovics G, Srivastava S. Regulation of apoptosis by a prostate-specific and prostate cancer-associated noncoding gene, PCGEM1. DNA Cell Biol. 2006;25(3):135-141.
    • (2006) DNA Cell Biol. , vol.25 , Issue.3 , pp. 135-141
    • Fu, X.1    Ravindranath, L.2    Tran, N.3    Petrovics, G.4    Srivastava, S.5
  • 317
    • 57149110631 scopus 로고    scopus 로고
    • Bidirectional transcription directs both transcriptional gene activation and suppression in human cells
    • Morris KV, Santoso S, Turner AM, Pastori C, Hawkins PG. Bidirectional transcription directs both transcriptional gene activation and suppression in human cells. PLoS Genet. 2008;4(11):e1000258.
    • (2008) PLoS Genet. , vol.4 , Issue.11
    • Morris, K.V.1    Santoso, S.2    Turner, A.M.3    Pastori, C.4    Hawkins, P.G.5
  • 318
    • 84896524997 scopus 로고    scopus 로고
    • PCAT-1, a long noncoding RNA, regulates BRCA2 and controls homologous recombination in cancer
    • Prensner JR, Chen W, Iyer MK, et al. PCAT-1, a long noncoding RNA, regulates BRCA2 and controls homologous recombination in cancer. Cancer Res. 2014;74(6):1651-1660.
    • (2014) Cancer Res. , vol.74 , Issue.6 , pp. 1651-1660
    • Prensner, J.R.1    Chen, W.2    Iyer, M.K.3
  • 319
    • 84872006379 scopus 로고    scopus 로고
    • MEG3: a novel long noncoding potentially tumour-suppressing RNA in meningiomas
    • Balik V, Srovnal J, Sulla I, et al. MEG3: a novel long noncoding potentially tumour-suppressing RNA in meningiomas. J Neurooncol. 2013;112(1):1-8.
    • (2013) J Neurooncol. , vol.112 , Issue.1 , pp. 1-8
    • Balik, V.1    Srovnal, J.2    Sulla, I.3
  • 320
    • 84884782873 scopus 로고    scopus 로고
    • Pint lincRNA connects the p53 pathway with epigenetic silencing by the Polycomb repressive complex 2
    • Marin-Bejar O, Marchese FP, Athie A, et al. Pint lincRNA connects the p53 pathway with epigenetic silencing by the Polycomb repressive complex 2. Genome Biol. 2013; 14(9):R104.
    • (2013) Genome Biol. , vol.14 , Issue.9
    • Marin-Bejar, O.1    Marchese, F.P.2    Athie, A.3
  • 321
    • 77953957633 scopus 로고    scopus 로고
    • A coding-independent function of gene and pseudogene mRNAs regulates tumour biology
    • Poliseno L, Salmena L, Zhang J, Carver B, Haveman WJ, Pandolfi PP. A coding-independent function of gene and pseudogene mRNAs regulates tumour biology. Nature. 2010;465(7301):1033-1038.
    • (2010) Nature. , vol.465 , Issue.7301 , pp. 1033-1038
    • Poliseno, L.1    Salmena, L.2    Zhang, J.3    Carver, B.4    Haveman, W.J.5    Pandolfi, P.P.6
  • 322
    • 84876177255 scopus 로고    scopus 로고
    • A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells
    • Johnsson P, Ackley A, Vidarsdottir L, et al. A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells. Nat Struct Mol Biol. 2013;20(4):440-446.
    • (2013) Nat Struct Mol Biol. , vol.20 , Issue.4 , pp. 440-446
    • Johnsson, P.1    Ackley, A.2    Vidarsdottir, L.3
  • 323
    • 84877270735 scopus 로고    scopus 로고
    • LncRNA loc285194 is a p53-regulated tumor suppressor
    • Liu Q, Huang J, Zhou N, et al. LncRNA loc285194 is a p53-regulated tumor suppressor. Nucleic Acids Res. 2013; 41(9):4976-4987.
    • (2013) Nucleic Acids Res. , vol.41 , Issue.9 , pp. 4976-4987
    • Liu, Q.1    Huang, J.2    Zhou, N.3
  • 324
    • 84906791043 scopus 로고    scopus 로고
    • Long noncoding RNA TARID directs demethylation and activation of the tumor suppressor TCF21 via GADD45A
    • Arab K, Park YJ, Lindroth AM, et al. Long noncoding RNA TARID directs demethylation and activation of the tumor suppressor TCF21 via GADD45A. Mol Cell. 2014; 55(4):604-614.
    • (2014) Mol Cell. , vol.55 , Issue.4 , pp. 604-614
    • Arab, K.1    Park, Y.J.2    Lindroth, A.M.3
  • 325
    • 84899754537 scopus 로고    scopus 로고
    • Long non-coding RNA HOTAIR is targeted and regulated by miR-141 in human cancer cells
    • Chiyomaru T, Fukuhara S, Saini S, et al. Long non-coding RNA HOTAIR is targeted and regulated by miR-141 in human cancer cells. J Biol Chem. 2014;289(18):12550-12565.
    • (2014) J Biol Chem. , vol.289 , Issue.18 , pp. 12550-12565
    • Chiyomaru, T.1    Fukuhara, S.2    Saini, S.3
  • 326
    • 84887122461 scopus 로고    scopus 로고
    • The long noncoding RNA SChLAP1 promotes aggressive prostate cancer and antagonizes the SWI/SNF complex
    • Prensner JR, Iyer MK, Sahu A, et al. The long noncoding RNA SChLAP1 promotes aggressive prostate cancer and antagonizes the SWI/SNF complex. Nat Genet. 2013; 45(11):1392-1398.
    • (2013) Nat Genet. , vol.45 , Issue.11 , pp. 1392-1398
    • Prensner, J.R.1    Iyer, M.K.2    Sahu, A.3
  • 327
    • 84900316922 scopus 로고    scopus 로고
    • A long noncoding RNA activated by TGF-β promotes the invasion-metastasis cascade in hepatocellular carcinoma
    • Yuan JH, Yang F, Wang F, et al. A long noncoding RNA activated by TGF-β promotes the invasion-metastasis cascade in hepatocellular carcinoma. Cancer Cell. 2014; 25(5):666-681.
    • (2014) Cancer Cell. , vol.25 , Issue.5 , pp. 666-681
    • Yuan, J.H.1    Yang, F.2    Wang, F.3
  • 328
    • 84879810589 scopus 로고    scopus 로고
    • Targeting long non-coding RNAs in cancers: progress and prospects
    • Li CH, Chen Y. Targeting long non-coding RNAs in cancers: progress and prospects. Int J Biochem Cell Biol. 2013; 45(8):1895-1910.
    • (2013) Int J Biochem Cell Biol. , vol.45 , Issue.8 , pp. 1895-1910
    • Li, C.H.1    Chen, Y.2
  • 329
    • 84887101163 scopus 로고    scopus 로고
    • MicroRNAs and other noncoding RNAs as targets for anticancer drug development
    • Ling H, Fabbri M, Calin GA. MicroRNAs and other noncoding RNAs as targets for anticancer drug development. Nat Rev Drug Discov. 2013;12(11):847-865.
    • (2013) Nat Rev Drug Discov. , vol.12 , Issue.11 , pp. 847-865
    • Ling, H.1    Fabbri, M.2    Calin, G.A.3
  • 330
    • 84879574789 scopus 로고    scopus 로고
    • linc-UBC1 physically associates with polycomb repressive complex 2 (PRC2) and acts as a negative prognostic factor for lymph node metastasis and survival in bladder cancer
    • He W, Cai Q, Sun F, et al. linc-UBC1 physically associates with polycomb repressive complex 2 (PRC2) and acts as a negative prognostic factor for lymph node metastasis and survival in bladder cancer. Biochim Biophys Acta. 2013; 1832(10):1528-1537.
    • (2013) Biochim Biophys Acta. , vol.1832 , Issue.10 , pp. 1528-1537
    • He, W.1    Cai, Q.2    Sun, F.3
  • 331
    • 0347285289 scopus 로고    scopus 로고
    • XIST unmethylatedDNAfragments in male-derived plasma as a tumour marker for testicular cancer
    • Kawakami T, Okamoto K, Ogawa O, Okada Y. XIST unmethylatedDNAfragments in male-derived plasma as a tumour marker for testicular cancer. Lancet. 2004; 363(9402):40-42.
    • (2004) Lancet. , vol.363 , Issue.9402 , pp. 40-42
    • Kawakami, T.1    Okamoto, K.2    Ogawa, O.3    Okada, Y.4
  • 332
    • 79952635167 scopus 로고    scopus 로고
    • Prostate cancer: diagnostic performance of the PCA3 urine test
    • Lee GL, Dobi A, Srivastava S. Prostate cancer: diagnostic performance of the PCA3 urine test. Nat Rev Urol. 2011; 8(3):123-124.
    • (2011) Nat Rev Urol. , vol.8 , Issue.3 , pp. 123-124
    • Lee, G.L.1    Dobi, A.2    Srivastava, S.3
  • 333
    • 84920996096 scopus 로고    scopus 로고
    • Long noncoding RNA MRUL promotes ABCB1 expression in multidrug-resistant gastric cancer cell sublines
    • Wang Y, Zhang D, Wu K, Zhao Q, Nie Y, Fan D. Long noncoding RNA MRUL promotes ABCB1 expression in multidrug-resistant gastric cancer cell sublines. Mol Cell Biol. 2014;34(17):3182-3193.
    • (2014) Mol Cell Biol. , vol.34 , Issue.17 , pp. 3182-3193
    • Wang, Y.1    Zhang, D.2    Wu, K.3    Zhao, Q.4    Nie, Y.5    Fan, D.6
  • 335
    • 84891798006 scopus 로고    scopus 로고
    • NONCODEv4: exploring the world of long non-coding RNA genes
    • Database issue
    • Xie C, Yuan J, Li H, et al. NONCODEv4: exploring the world of long non-coding RNA genes. Nucleic Acids Res. 2014;42(Database issue):D98-D103.
    • (2014) Nucleic Acids Res. , vol.42 , pp. D98-D103
    • Xie, C.1    Yuan, J.2    Li, H.3
  • 336
    • 84883249942 scopus 로고    scopus 로고
    • Long noncoding RNAs: new "links" between gene expression and cellular outcomes in endocrinology
    • Sun M, Kraus WL. Long noncoding RNAs: new "links" between gene expression and cellular outcomes in endocrinology. Mol Endocrinol. 2013;27(9):1390-1402.
    • (2013) Mol Endocrinol , vol.27 , Issue.9 , pp. 1390-1402
    • Sun, M.1    Kraus, W.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.