-
1
-
-
19944376457
-
Global identification of human transcribed sequences with genome tiling arrays
-
Bertone, P., Stolc, V., Royce, T. E., Rozowsky, J. S., Urban, A. E., Zhu, X., Rinn, J. L., Tongprasit, W., Samanta, M., Weissman, S., Gerstein, M., and Snyder, M. (2004) Global identification of human transcribed sequences with genome tiling arrays. Science 306, 2242-2246
-
(2004)
Science
, vol.306
, pp. 2242-2246
-
-
Bertone, P.1
Stolc, V.2
Royce, T.E.3
Rozowsky, J.S.4
Urban, A.E.5
Zhu, X.6
Rinn, J.L.7
Tongprasit, W.8
Samanta, M.9
Weissman, S.10
Gerstein, M.11
Snyder, M.12
-
2
-
-
0037012881
-
Large-scale transcriptional activity in chromosomes 21 and 22
-
Kapranov, P., Cawley, S. E., Drenkow, J., Bekiranov, S., Strausberg, R. L., Fodor, S. P., and Gingeras, T. R. (2002) Large-scale transcriptional activity in chromosomes 21 and 22. Science 296, 916-919
-
(2002)
Science
, vol.296
, pp. 916-919
-
-
Kapranov, P.1
Cawley, S.E.2
Drenkow, J.3
Bekiranov, S.4
Strausberg, R.L.5
Fodor, S.P.6
Gingeras, T.R.7
-
3
-
-
0037442493
-
The transcriptional activity of human chromosome 22
-
Rinn, J. L., Euskirchen, G., Bertone, P., Martone, R., Luscombe, N. M., Hartman, S., Harrison, P. M., Nelson, F. K., Miller, P., Gerstein, M., Weissman, S., and Snyder, M. (2003) The transcriptional activity of human chromosome 22. Genes Dev. 17, 529-540
-
(2003)
Genes Dev.
, vol.17
, pp. 529-540
-
-
Rinn, J.L.1
Euskirchen, G.2
Bertone, P.3
Martone, R.4
Luscombe, N.M.5
Hartman, S.6
Harrison, P.M.7
Nelson, F.K.8
Miller, P.9
Gerstein, M.10
Weissman, S.11
Snyder, M.12
-
4
-
-
34250729138
-
Functional demarcation of active and silent chromatin domains in human hox loci by noncoding rnas
-
Rinn, J. L., Kertesz, M., Wang, J. K., Squazzo, S. L., Xu, X., Brugmann, S. A., Goodnough, L. H., Helms, J. A., Farnham, P. J., Segal, E., and Chang, H. Y. (2007) Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs. Cell 129, 1311-1323
-
(2007)
Cell
, vol.129
, pp. 1311-1323
-
-
Rinn, J.L.1
Kertesz, M.2
Wang, J.K.3
Squazzo, S.L.4
Xu, X.5
Brugmann, S.A.6
Goodnough, L.H.7
Helms, J.A.8
Farnham, P.J.9
Segal, E.10
Chang, H.Y.11
-
5
-
-
78651397147
-
Large non-coding rnas: Missing links in cancer?
-
Huarte, M., and Rinn, J. L. (2010) Large non-coding RNAs: missing links in cancer? Hum. Mol. Genet. 19, R152-R161
-
(2010)
Hum. Mol. Genet.
, vol.19
-
-
Huarte, M.1
Rinn, J.L.2
-
6
-
-
81355142141
-
Non-coding rnas in human disease
-
Esteller, M. (2011) Non-coding RNAs in human disease. Nat. Rev. Genet. 12, 861-874
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 861-874
-
-
Esteller, M.1
-
7
-
-
80053045739
-
Molecular mechanisms of long noncoding rnas
-
Wang, K. C., and Chang, H. Y. (2011) Molecular mechanisms of long noncoding RNAs. Mol. Cell 43, 904-914
-
(2011)
Mol. Cell
, vol.43
, pp. 904-914
-
-
Wang, K.C.1
Chang, H.Y.2
-
8
-
-
67650921949
-
Many human large intergenic noncoding rnas associate with chromatin-modifying complexes and affect gene expression
-
Khalil, A. M., Guttman, M., Huarte, M., Garber, M., Raj, A., Rivea Morales, D., Thomas, K., Presser, A., Bernstein, B. E., van Oudenaarden, A., Regev, A., Lander, E. S., and Rinn, J. L. (2009) Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc. Natl. Acad. Sci. U.S.A. 106, 11667-11672
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 11667-11672
-
-
Khalil, A.M.1
Guttman, M.2
Huarte, M.3
Garber, M.4
Raj, A.5
Rivea Morales, D.6
Thomas, K.7
Presser, A.8
Bernstein, B.E.9
Van Oudenaarden, A.10
Regev, A.11
Lander, E.S.12
Rinn, J.L.13
-
9
-
-
79953748673
-
A long noncoding rna maintains active chromatin to coordinate homeotic gene expression
-
Wang, K. C., Yang, Y. W., Liu, B., Sanyal, A., Corces-Zimmerman, R., Chen, Y., Lajoie, B. R., Protacio, A., Flynn, R. A., Gupta, R. A., Wysocka, J., Lei, M., Dekker, J., Helms, J. A., and Chang, H. Y. (2011) A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression. Nature 472, 120-124
-
(2011)
Nature
, vol.472
, pp. 120-124
-
-
Wang, K.C.1
Yang, Y.W.2
Liu, B.3
Sanyal, A.4
Corces-Zimmerman, R.5
Chen, Y.6
Lajoie, B.R.7
Protacio, A.8
Flynn, R.A.9
Gupta, R.A.10
Wysocka, J.11
Lei, M.12
Dekker, J.13
Helms, J.A.14
Chang, H.Y.15
-
10
-
-
62249133709
-
Chromatin signature reveals over a thousand highly conserved large non-coding rnas in mammals
-
Guttman, M., Amit, I., Garber, M., French, C., Lin, M. F., Feldser, D., Huarte, M., Zuk, O., Carey, B. W., Cassady, J. P., Cabili, M. N., Jaenisch, R., Mikkelsen, T. S., Jacks, T., Hacohen, N., Bernstein, B. E., Kellis, M., Regev, A., Rinn, J. L., and Lander, E. S. (2009) Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals. Nature 458, 223-227
-
(2009)
Nature
, vol.458
, pp. 223-227
-
-
Guttman, M.1
Amit, I.2
Garber, M.3
French, C.4
Lin, M.F.5
Feldser, D.6
Huarte, M.7
Zuk, O.8
Carey, B.W.9
Cassady, J.P.10
Cabili, M.N.11
Jaenisch, R.12
Mikkelsen, T.S.13
Jacks, T.14
Hacohen, N.15
Bernstein, B.E.16
Kellis, M.17
Regev, A.18
Rinn, J.L.19
Lander, E.S.20
more..
-
11
-
-
77954572735
-
Long noncoding rna as modular scaffold of histone modification complexes
-
Tsai, M. C., Manor, O., Wan, Y., Mosammaparast, N., Wang, J. K., Lan, F., Shi, Y., Segal, E., and Chang, H. Y. (2010) Long noncoding RNA as modular scaffold of histone modification complexes. Science 329, 689-693
-
(2010)
Science
, vol.329
, pp. 689-693
-
-
Tsai, M.C.1
Manor, O.2
Wan, Y.3
Mosammaparast, N.4
Wang, J.K.5
Lan, F.6
Shi, Y.7
Segal, E.8
Chang, H.Y.9
-
12
-
-
80052869283
-
Lincrnas act in the circuitry controlling pluripotency and differentiation
-
Guttman, M., Donaghey, J., Carey, B. W., Garber, M., Grenier, J. K., Munson, G., Young, G., Lucas, A. B., Ach, R., Bruhn, L., Yang, X., Amit, I., Meissner, A., Regev, A., Rinn, J. L., Root, D. E., and Lander, E. S. (2011) lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 477, 295-300
-
(2011)
Nature
, vol.477
, pp. 295-300
-
-
Guttman, M.1
Donaghey, J.2
Carey, B.W.3
Garber, M.4
Grenier, J.K.5
Munson, G.6
Young, G.7
Lucas, A.B.8
Ach, R.9
Bruhn, L.10
Yang, X.11
Amit, I.12
Meissner, A.13
Regev, A.14
Rinn, J.L.15
Root, D.E.16
Lander, E.S.17
-
13
-
-
77951118936
-
Long non-coding rna hotair reprograms chromatin state to promote cancer metastasis
-
Gupta, R. A., Shah, N., Wang, K. C., Kim, J., Horlings, H. M., Wong, D. J., Tsai, M. C., Hung, T., Argani, P., Rinn, J. L., Wang, Y., Brzoska, P., Kong, B., Li, R., West, R. B., van de Vijver, M. J., Sukumar, S., and Chang, H. Y. (2010) Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature 464, 1071-1076
-
(2010)
Nature
, vol.464
, pp. 1071-1076
-
-
Gupta, R.A.1
Shah, N.2
Wang, K.C.3
Kim, J.4
Horlings, H.M.5
Wong, D.J.6
Tsai, M.C.7
Hung, T.8
Argani, P.9
Rinn, J.L.10
Wang, Y.11
Brzoska, P.12
Kong, B.13
Li, R.14
West, R.B.15
Van De Vijver, M.J.16
Sukumar, S.17
Chang, H.Y.18
-
14
-
-
80054029971
-
Long noncoding rna hotair regulates polycomb-dependent chromatin modification and is associated with poor prognosis in colorectal cancers
-
Kogo, R., Shimamura, T., Mimori, K., Kawahara, K., Imoto, S., Sudo, T., Tanaka, F., Shibata, K., Suzuki, A., Komune, S., Miyano, S., and Mori, M. (2011) Long noncoding RNA HOTAIR regulates polycomb-dependent chromatin modification and is associated with poor prognosis in colorectal cancers. Cancer Res. 71, 6320-6326
-
(2011)
Cancer Res.
, vol.71
, pp. 6320-6326
-
-
Kogo, R.1
Shimamura, T.2
Mimori, K.3
Kawahara, K.4
Imoto, S.5
Sudo, T.6
Tanaka, F.7
Shibata, K.8
Suzuki, A.9
Komune, S.10
Miyano, S.11
Mori, M.12
-
15
-
-
84875890253
-
Hotair is a negative prognostic factor and exhibits pro-oncogenic activity in pancreatic cancer
-
Kim, K., Jutooru, I., Chadalapaka, G., Johnson, G., Frank, J., Burghardt, R., Kim, S., and Safe, S. (2013) HOTAIR is a negative prognostic factor and exhibits pro-oncogenic activity in pancreatic cancer. Oncogene 32, 1616-1625
-
(2013)
Oncogene
, vol.32
, pp. 1616-1625
-
-
Kim, K.1
Jutooru, I.2
Chadalapaka, G.3
Johnson, G.4
Frank, J.5
Burghardt, R.6
Kim, S.7
Safe, S.8
-
16
-
-
58249088751
-
Micrornas: Target recognition and regulatory functions
-
Bartel, D. P. (2009) MicroRNAs: target recognition and regulatory functions. Cell 136, 215-233
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.P.1
-
17
-
-
84861866572
-
The mechanics of mirna-mediated gene silencing: A look under the hood of mirisc
-
Fabian, M. R., and Sonenberg, N. (2012) The mechanics of miRNA-mediated gene silencing: a look under the hood of miRISC. Nat. Struct. Mol. Biol. 19, 586-593
-
(2012)
Nat. Struct. Mol. Biol.
, vol.19
, pp. 586-593
-
-
Fabian, M.R.1
Sonenberg, N.2
-
18
-
-
60149095444
-
Most mammalian mrnas are conserved targets of micrornas
-
Friedman, R. C., Farh, K. K., Burge, C. B., and Bartel, D. P. (2009) Most mammalian mRNAs are conserved targets of microRNAs. Genome Res. 19, 92-105
-
(2009)
Genome Res.
, vol.19
, pp. 92-105
-
-
Friedman, R.C.1
Farh, K.K.2
Burge, C.B.3
Bartel, D.P.4
-
19
-
-
11844278458
-
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microrna targets
-
Lewis, B. P., Burge, C. B., and Bartel, D. P. (2005) Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 120, 15-20
-
(2005)
Cell
, vol.120
, pp. 15-20
-
-
Lewis, B.P.1
Burge, C.B.2
Bartel, D.P.3
-
20
-
-
70349320158
-
Causes and consequences of microrna dysregulation in cancer
-
Croce, C. M. (2009) Causes and consequences of microRNA dysregulation in cancer. Nat. Rev. Genet. 10, 704-714
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 704-714
-
-
Croce, C.M.1
-
21
-
-
33749507943
-
A small piece in the cancer puzzle: Micrornas as tumor suppressors and oncogenes
-
Kent, O. A., and Mendell, J. T. (2006) A small piece in the cancer puzzle: microRNAs as tumor suppressors and oncogenes. Oncogene 25, 6188-6196
-
(2006)
Oncogene
, vol.25
, pp. 6188-6196
-
-
Kent, O.A.1
Mendell, J.T.2
-
22
-
-
41649091906
-
The mir-200 family determines the epithelial phenotype of cancer cells by targeting the e-cadherin repressors zeb1 and zeb2
-
Park, S. M., Gaur, A. B., Lengyel, E., and Peter, M. E. (2008) The miR-200 family determines the epithelial phenotype of cancer cells by targeting the E-cadherin repressors ZEB1 and ZEB2. Genes Dev. 22, 894-907
-
(2008)
Genes Dev.
, vol.22
, pp. 894-907
-
-
Park, S.M.1
Gaur, A.B.2
Lengyel, E.3
Peter, M.E.4
-
23
-
-
43049103824
-
The mir-200 family and mir-205 regulate epithelial to mesenchymal transition by targeting zeb1 and sip1
-
Gregory, P. A., Bert, A. G., Paterson, E. L., Barry, S. C., Tsykin, A., Farshid, G., Vadas, M. A., Khew-Goodall, Y., and Goodall, G. J. (2008) The miR-200 family and miR-205 regulate epithelial to mesenchymal transition by targeting ZEB1 and SIP1. Nat. Cell Biol. 10, 593-601
-
(2008)
Nat. Cell Biol.
, vol.10
, pp. 593-601
-
-
Gregory, P.A.1
Bert, A.G.2
Paterson, E.L.3
Barry, S.C.4
Tsykin, A.5
Farshid, G.6
Vadas, M.A.7
Khew-Goodall, Y.8
Goodall, G.J.9
-
24
-
-
47249091921
-
The mir-200 family inhibits epithelial-mesenchymal transition and cancer cell migration by direct targeting of e-cadherin transcriptional repressors zeb1 and zeb2
-
Korpal, M., Lee, E. S., Hu, G., and Kang, Y. (2008) The miR-200 family inhibits epithelial-mesenchymal transition and cancer cell migration by direct targeting of E-cadherin transcriptional repressors ZEB1 and ZEB2. J. Biol. Chem. 283, 14910-14914
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 14910-14914
-
-
Korpal, M.1
Lee, E.S.2
Hu, G.3
Kang, Y.4
-
25
-
-
54049084380
-
A double-negative feedback loop between zeb1-sip1 and the microrna-200 family regulates epithelialmesenchymal transition
-
Bracken, C. P., Gregory, P. A., Kolesnikoff, N., Bert, A. G., Wang, J., Shannon, M. F., and Goodall, G. J. (2008) A double-negative feedback loop between ZEB1-SIP1 and the microRNA-200 family regulates epithelialmesenchymal transition. Cancer Res. 68, 7846-7854
-
(2008)
Cancer Res.
, vol.68
, pp. 7846-7854
-
-
Bracken, C.P.1
Gregory, P.A.2
Kolesnikoff, N.3
Bert, A.G.4
Wang, J.5
Shannon, M.F.6
Goodall, G.J.7
-
26
-
-
80052470207
-
Direct targeting of sec23a by mir-200s influences cancer cell secretome and promotes metastatic colonization
-
Korpal, M., Ell, B. J., Buffa, F. M., Ibrahim, T., Blanco, M. A., Celia-Terrassa, T., Mercatali, L., Khan, Z., Goodarzi, H., Hua, Y., Wei, Y., Hu, G., Garcia, B. A., Ragoussis, J., Amadori, D., Harris, A. L., and Kang, Y. (2011) Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization. Nat. Med. 17, 1101-1108
-
(2011)
Nat. Med.
, vol.17
, pp. 1101-1108
-
-
Korpal, M.1
Ell, B.J.2
Buffa, F.M.3
Ibrahim, T.4
Blanco, M.A.5
Celia-Terrassa, T.6
Mercatali, L.7
Khan, Z.8
Goodarzi, H.9
Hua, Y.10
Wei, Y.11
Hu, G.12
Garcia, B.A.13
Ragoussis, J.14
Amadori, D.15
Harris, A.L.16
Kang, Y.17
-
27
-
-
57049148002
-
Molecular characterization of human argonaute-containing ribonucleoprotein complexes and their bound target mrnas
-
Landthaler, M., Gaidatzis, D., Rothballer, A., Chen, P. Y., Soll, S. J., Dinic, L., Ojo, T., Hafner, M., Zavolan, M., and Tuschl, T. (2008) Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs. RNA 14, 2580-2596
-
(2008)
RNA
, vol.14
, pp. 2580-2596
-
-
Landthaler, M.1
Gaidatzis, D.2
Rothballer, A.3
Chen, P.Y.4
Soll, S.J.5
Dinic, L.6
Ojo, T.7
Hafner, M.8
Zavolan, M.9
Tuschl, T.10
-
28
-
-
84883762956
-
Antisense transcript long noncoding rna (lncrna) hotair is transcriptionally induced by estradiol
-
Bhan, A., Hussain, I., Ansari, K. I., Kasiri, S., Bashyal, A., and Mandal, S. S. (2013) Antisense transcript long noncoding RNA (lncRNA) HOTAIR is transcriptionally induced by estradiol. J. Mol. Biol. 425, 3707-3722
-
(2013)
J. Mol. Biol.
, vol.425
, pp. 3707-3722
-
-
Bhan, A.1
Hussain, I.2
Ansari, K.I.3
Kasiri, S.4
Bashyal, A.5
Mandal, S.S.6
-
29
-
-
48749117943
-
Multi-targeted therapy of cancer by genistein
-
Banerjee, S., Li, Y., Wang, Z., and Sarkar, F. H. (2008) Multi-targeted therapy of cancer by genistein. Cancer Lett. 269, 226-242
-
(2008)
Cancer Lett.
, vol.269
, pp. 226-242
-
-
Banerjee, S.1
Li, Y.2
Wang, Z.3
Sarkar, F.H.4
-
30
-
-
77957578387
-
Inhibition of cancer cell invasion and metastasis by genistein
-
Pavese, J. M., Farmer, R. L., and Bergan, R. C. (2010) Inhibition of cancer cell invasion and metastasis by genistein. Cancer Metastasis Rev. 29, 465-482
-
(2010)
Cancer Metastasis Rev.
, vol.29
, pp. 465-482
-
-
Pavese, J.M.1
Farmer, R.L.2
Bergan, R.C.3
-
31
-
-
84865503446
-
Mir-141 modulates androgen receptor transcriptional activity in human prostate cancer cells through targeting the small heterodimer partner protein
-
Xiao, J., Gong, A. Y., Eischeid, A. N., Chen, D., Deng, C., Young, C. Y., and Chen, X. M. (2012) miR-141 modulates androgen receptor transcriptional activity in human prostate cancer cells through targeting the small heterodimer partner protein. Prostate 72, 1514-1522
-
(2012)
Prostate
, vol.72
, pp. 1514-1522
-
-
Xiao, J.1
Gong, A.Y.2
Eischeid, A.N.3
Chen, D.4
Deng, C.5
Young, C.Y.6
Chen, X.M.7
-
33
-
-
84874878684
-
Genistein up-regulates tumor suppressor microrna-574-3p in prostate cancer
-
Chiyomaru, T., Yamamura, S., Fukuhara, S., Hidaka, H., Majid, S., Saini, S., Arora, S., Deng, G., Shahryari, V., Chang, I., Tanaka, Y., Tabatabai, Z. L., Enokida, H., Seki, N., Nakagawa, M., and Dahiya, R. (2013) Genistein up-regulates tumor suppressor microRNA-574-3p in prostate cancer. PloS One 8, e58929
-
(2013)
PloS One
, vol.8
-
-
Chiyomaru, T.1
Yamamura, S.2
Fukuhara, S.3
Hidaka, H.4
Majid, S.5
Saini, S.6
Arora, S.7
Deng, G.8
Shahryari, V.9
Chang, I.10
Tanaka, Y.11
Tabatabai, Z.L.12
Enokida, H.13
Seki, N.14
Nakagawa, M.15
Dahiya, R.16
-
34
-
-
77954427807
-
Microrna-141 regulates smad interacting protein 1 (sip1) and inhibits migration and invasion of colorectal cancer cells
-
Hu, M., Xia, M., Chen, X., Lin, Z., Xu, Y., Ma, Y., and Su, L. (2010) MicroRNA-141 regulates Smad interacting protein 1 (SIP1) and inhibits migration and invasion of colorectal cancer cells. Dig. Dis. Sci. 55, 2365-2372
-
(2010)
Dig. Dis. Sci.
, vol.55
, pp. 2365-2372
-
-
Hu, M.1
Xia, M.2
Chen, X.3
Lin, Z.4
Xu, Y.5
Ma, Y.6
Su, L.7
-
35
-
-
57149115765
-
Genome-wide microrna expression profiling in renal cell carcinoma: Significant down-regulation of mir-141 and mir-200c
-
Nakada, C., Matsuura, K., Tsukamoto, Y., Tanigawa, M., Yoshimoto, T., Narimatsu, T., Nguyen, L. T., Hijiya, N., Uchida, T., Sato, F., Mimata, H., Seto, M., and Moriyama, M. (2008) Genome-wide microRNA expression profiling in renal cell carcinoma: significant down-regulation of miR-141 and miR-200c. J. Pathol. 216, 418-427
-
(2008)
J. Pathol.
, vol.216
, pp. 418-427
-
-
Nakada, C.1
Matsuura, K.2
Tsukamoto, Y.3
Tanigawa, M.4
Yoshimoto, T.5
Narimatsu, T.6
Nguyen, L.T.7
Hijiya, N.8
Uchida, T.9
Sato, F.10
Mimata, H.11
Seto, M.12
Moriyama, M.13
-
36
-
-
84901234896
-
Tumor-suppressing effects of mir-141 in human osteosarcoma
-
in press
-
Xu, H., Mei, Q., Xiong, C., and Zhao, J. (2013) Tumor-suppressing effects of miR-141 in human osteosarcoma. Cell Biochem. Biophys., in press
-
(2013)
Cell Biochem. Biophys.
-
-
Xu, H.1
Mei, Q.2
Xiong, C.3
Zhao, J.4
-
37
-
-
3042595545
-
α-Amanitin blocks translocation by human RNA polymerase II
-
Gong, X. Q., Nedialkov, Y. A., and Burton, Z. F. (2004) α-Amanitin blocks translocation by human RNA polymerase II. J. Biol. Chem. 279, 27422-27427
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 27422-27427
-
-
Gong, X.Q.1
Nedialkov, Y.A.2
Burton, Z.F.3
-
38
-
-
9344225704
-
In vivo degradation of rna polymerase ii largest subunit triggered by α-amanitin
-
Nguyen, V. T., Giannoni, F., Dubois, M. F., Seo, S. J., Vigneron, M., Kédinger, C., and Bensaude, O. (1996) In vivo degradation of RNA polymerase II largest subunit triggered by α-amanitin. Nucleic Acids Res. 24, 2924-2929
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 2924-2929
-
-
Nguyen, V.T.1
Giannoni, F.2
Dubois, M.F.3
Seo, S.J.4
Vigneron, M.5
Kédinger, C.6
Bensaude, O.7
-
39
-
-
4444368187
-
Argonaute2 is the catalytic engine of mammalian rnai
-
Liu, J., Carmell, M. A., Rivas, F. V., Marsden, C. G., Thomson, J. M., Song, J. J., Hammond, S. M., Joshua-Tor, L., and Hannon, G. J. (2004) Argonaute2 is the catalytic engine of mammalian RNAi. Science 305, 1437-1441
-
(2004)
Science
, vol.305
, pp. 1437-1441
-
-
Liu, J.1
Carmell, M.A.2
Rivas, F.V.3
Marsden, C.G.4
Thomson, J.M.5
Song, J.J.6
Hammond, S.M.7
Joshua-Tor, L.8
Hannon, G.J.9
-
40
-
-
37549014207
-
Argonaute proteins: Key players in rna silencing
-
Hutvagner, G., and Simard, M. J. (2008) Argonaute proteins: key players in RNA silencing. Nat. Rev. Mol. Cell Biol. 9, 22-32
-
(2008)
Nat. Rev. Mol. Cell Biol.
, vol.9
, pp. 22-32
-
-
Hutvagner, G.1
Simard, M.J.2
-
41
-
-
67650519133
-
The rna-induced silencing complex: A versatile gene-silencing machine
-
Pratt, A. J., and MacRae, I. J. (2009) The RNA-induced silencing complex: a versatile gene-silencing machine. J. Biol. Chem. 284, 17897-17901
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 17897-17901
-
-
Pratt, A.J.1
MacRae, I.J.2
-
42
-
-
77953957633
-
A coding-independent function of gene and pseudogene mrnas regulates tumour biology
-
Poliseno, L., Salmena, L., Zhang, J., Carver, B., Haveman, W. J., and Pandolfi, P. P. (2010) A coding-independent function of gene and pseudogene mRNAs regulates tumour biology. Nature 465, 1033-1038
-
(2010)
Nature
, vol.465
, pp. 1033-1038
-
-
Poliseno, L.1
Salmena, L.2
Zhang, J.3
Carver, B.4
Haveman, W.J.5
Pandolfi, P.P.6
-
43
-
-
77956542998
-
Creb up-regulates long non-coding rna, hulc expression through interaction with microrna-372 in liver cancer
-
Wang, J., Liu, X., Wu, H., Ni, P., Gu, Z., Qiao, Y., Chen, N., Sun, F., and Fan, Q. (2010) CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancer. Nucleic Acids Res. 38, 5366-5383
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 5366-5383
-
-
Wang, J.1
Liu, X.2
Wu, H.3
Ni, P.4
Gu, Z.5
Qiao, Y.6
Chen, N.7
Sun, F.8
Fan, Q.9
-
44
-
-
84885423196
-
Negative regulation of lncrna gas5 by mir-21
-
Zhang, Z., Zhu, Z., Watabe, K., Zhang, X., Bai, C., Xu, M., Wu, F., and Mo, Y. Y. (2013) Negative regulation of lncRNA GAS5 by miR-21. Cell Death Differ. 20, 1558-1568
-
(2013)
Cell Death Differ.
, vol.20
, pp. 1558-1568
-
-
Zhang, Z.1
Zhu, Z.2
Watabe, K.3
Zhang, X.4
Bai, C.5
Xu, M.6
Wu, F.7
Mo, Y.Y.8
-
45
-
-
84883762956
-
Antisense transcript long noncoding rna (lncrna) hotair is transcriptionally induced by estradiol
-
Bhan, A., Hussain, I., Ansari, K. I., Kasiri, S., Bashyal, A., and Mandal, S. S. (2013) Antisense transcript long noncoding RNA (lncRNA) HOTAIR is transcriptionally induced by estradiol. J. Mol. Biol. 425, 3707-3722
-
(2013)
J. Mol. Biol.
, vol.425
, pp. 3707-3722
-
-
Bhan, A.1
Hussain, I.2
Ansari, K.I.3
Kasiri, S.4
Bashyal, A.5
Mandal, S.S.6
-
46
-
-
84872797539
-
Clinical significance of the expression of long non-coding rna hotair in primary hepatocellular carcinoma
-
Ishibashi, M., Kogo, R., Shibata, K., Sawada, G., Takahashi, Y., Kurashige, J., Akiyoshi, S., Sasaki, S., Iwaya, T., Sudo, T., Sugimachi, K., Mimori, K., Wakabayashi, G., and Mori, M. (2013) Clinical significance of the expression of long non-coding RNA HOTAIR in primary hepatocellular carcinoma. Oncol. Rep. 29, 946-950
-
(2013)
Oncol. Rep.
, vol.29
, pp. 946-950
-
-
Ishibashi, M.1
Kogo, R.2
Shibata, K.3
Sawada, G.4
Takahashi, Y.5
Kurashige, J.6
Akiyoshi, S.7
Sasaki, S.8
Iwaya, T.9
Sudo, T.10
Sugimachi, K.11
Mimori, K.12
Wakabayashi, G.13
Mori, M.14
-
47
-
-
84875580744
-
Long noncoding rna hotair is an independent prognostic marker for nasopharyngeal carcinoma progression and survival
-
Nie, Y., Liu, X., Qu, S., Song, E., Zou, H., and Gong, C. (2013) Long noncoding RNA HOTAIR is an independent prognostic marker for nasopharyngeal carcinoma progression and survival. Cancer Sci. 104, 458-464
-
(2013)
Cancer Sci.
, vol.104
, pp. 458-464
-
-
Nie, Y.1
Liu, X.2
Qu, S.3
Song, E.4
Zou, H.5
Gong, C.6
-
48
-
-
84878767058
-
Association of large noncoding rna hotair expression and its downstream intergenic cpg island methylation with survival in breast cancer
-
Lu, L., Zhu, G., Zhang, C., Deng, Q., Katsaros, D., Mayne, S. T., Risch, H. A., Mu, L., Canuto, E. M., Gregori, G., Benedetto, C., and Yu, H. (2012) Association of large noncoding RNA HOTAIR expression and its downstream intergenic CpG island methylation with survival in breast cancer. Breast Cancer Res. Treat. 136, 875-883
-
(2012)
Breast Cancer Res. Treat.
, vol.136
, pp. 875-883
-
-
Lu, L.1
Zhu, G.2
Zhang, C.3
Deng, Q.4
Katsaros, D.5
Mayne, S.T.6
Risch, H.A.7
Mu, L.8
Canuto, E.M.9
Gregori, G.10
Benedetto, C.11
Yu, H.12
-
49
-
-
84863393119
-
Upregulation of mir-196a and hotair drive malignant character in gastrointestinal stromal tumors
-
Niinuma, T., Suzuki, H., Nojima, M., Nosho, K., Yamamoto, H., Takamaru, H., Yamamoto, E., Maruyama, R., Nobuoka, T., Miyazaki, Y., Nishida, T., Bamba, T., Kanda, T., Ajioka, Y., Taguchi, T., Okahara, S., Takahashi, H., Nishida, Y., Hosokawa, M., Hasegawa, T., Tokino, T., Hirata, K., Imai, K., Toyota, M., and Shinomura, Y. (2012) Upregulation of miR-196a and HOTAIR drive malignant character in gastrointestinal stromal tumors. Cancer Res. 72, 1126-1136
-
(2012)
Cancer Res.
, vol.72
, pp. 1126-1136
-
-
Niinuma, T.1
Suzuki, H.2
Nojima, M.3
Nosho, K.4
Yamamoto, H.5
Takamaru, H.6
Yamamoto, E.7
Maruyama, R.8
Nobuoka, T.9
Miyazaki, Y.10
Nishida, T.11
Bamba, T.12
Kanda, T.13
Ajioka, Y.14
Taguchi, T.15
Okahara, S.16
Takahashi, H.17
Nishida, Y.18
Hosokawa, M.19
Hasegawa, T.20
Tokino, T.21
Hirata, K.22
Imai, K.23
Toyota, M.24
Shinomura, Y.25
more..
-
50
-
-
79960128700
-
Genistein, an epigenome modifier during cancer prevention
-
Zhang, Y., and Chen, H. (2011) Genistein, an epigenome modifier during cancer prevention. Epigenetics 6, 888-891
-
(2011)
Epigenetics
, vol.6
, pp. 888-891
-
-
Zhang, Y.1
Chen, H.2
-
51
-
-
79958831930
-
Genistein attenuates wnt signaling by up-regulating sfrp2 in a human colon cancer cell line
-
Zhang, Y., and Chen, H. (2011) Genistein attenuates WNT signaling by up-regulating sFRP2 in a human colon cancer cell line. Exp. Biol. Med. (Maywood) 236, 714-722
-
(2011)
Exp. Biol. Med. (Maywood
, vol.236
, pp. 714-722
-
-
Zhang, Y.1
Chen, H.2
-
52
-
-
84881015477
-
Genistein inhibits prostate cancer cell growth by targeting mir-34a and oncogenic hotair
-
Chiyomaru, T., Yamamura, S., Fukuhara, S., Yoshino, H., Kinoshita, T., Majid, S., Saini, S., Chang, I., Tanaka, Y., Enokida, H., Seki, N., Nakagawa, M., and Dahiya, R. (2013) Genistein inhibits prostate cancer cell growth by targeting miR-34a and oncogenic HOTAIR. PloS One 8, e70372
-
(2013)
PloS One
, vol.8
-
-
Chiyomaru, T.1
Yamamura, S.2
Fukuhara, S.3
Yoshino, H.4
Kinoshita, T.5
Majid, S.6
Saini, S.7
Chang, I.8
Tanaka, Y.9
Enokida, H.10
Seki, N.11
Nakagawa, M.12
Dahiya, R.13
-
53
-
-
84865287011
-
Genistein suppresses prostate cancer growth through inhibition of oncogenic microrna-151
-
Chiyomaru, T., Yamamura, S., Zaman, M. S., Majid, S., Deng, G., Shahryari, V., Saini, S., Hirata, H., Ueno, K., Chang, I., Tanaka, Y., Tabatabai, Z. L., Enokida, H., Nakagawa, M., and Dahiya, R. (2012) Genistein suppresses prostate cancer growth through inhibition of oncogenic microRNA-151. PloS One 7, e43812
-
(2012)
PloS One
, vol.7
-
-
Chiyomaru, T.1
Yamamura, S.2
Zaman, M.S.3
Majid, S.4
Deng, G.5
Shahryari, V.6
Saini, S.7
Hirata, H.8
Ueno, K.9
Chang, I.10
Tanaka, Y.11
Tabatabai, Z.L.12
Enokida, H.13
Nakagawa, M.14
Dahiya, R.15
-
54
-
-
77950822746
-
Regulation of minichromosome maintenance gene family by microrna-1296 and genistein in prostate cancer
-
Majid, S., Dar, A. A., Saini, S., Chen, Y., Shahryari, V., Liu, J., Zaman, M. S., Hirata, H., Yamamura, S., Ueno, K., Tanaka, Y., and Dahiya, R. (2010) Regulation of minichromosome maintenance gene family by microRNA-1296 and genistein in prostate cancer. Cancer Res. 70, 2809-2818
-
(2010)
Cancer Res.
, vol.70
, pp. 2809-2818
-
-
Majid, S.1
Dar, A.A.2
Saini, S.3
Chen, Y.4
Shahryari, V.5
Liu, J.6
Zaman, M.S.7
Hirata, H.8
Yamamura, S.9
Ueno, K.10
Tanaka, Y.11
Dahiya, R.12
-
55
-
-
54449097149
-
A search for conserved sequences in coding regions reveals that the let-7 microrna targets dicer within its coding sequence
-
Forman, J. J., Legesse-Miller, A., and Coller, H. A. (2008) A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence. Proc. Natl. Acad. Sci. U.S.A. 105, 14879-14884
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 14879-14884
-
-
Forman, J.J.1
Legesse-Miller, A.2
Coller, H.A.3
-
56
-
-
79960489634
-
Unusually effective microrna targeting within repeat-rich coding regions of mammalian mrnas
-
Schnall-Levin, M., Rissland, O. S., Johnston, W. K., Perrimon, N., Bartel, D. P., and Berger, B. (2011) Unusually effective microRNA targeting within repeat-rich coding regions of mammalian mRNAs. Genome Res. 21, 1395-1403
-
(2011)
Genome Res.
, vol.21
, pp. 1395-1403
-
-
Schnall-Levin, M.1
Rissland, O.S.2
Johnston, W.K.3
Perrimon, N.4
Bartel, D.P.5
Berger, B.6
-
57
-
-
77957662209
-
Conserved microrna targeting in drosophila is as widespread in coding regions as in 3'utrs
-
Schnall-Levin, M., Zhao, Y., Perrimon, N., and Berger, B. (2010) Conserved microRNA targeting in Drosophila is as widespread in coding regions as in 3'UTRs. Proc. Natl. Acad. Sci. U.S.A. 107, 15751-15756
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 15751-15756
-
-
Schnall-Levin, M.1
Zhao, Y.2
Perrimon, N.3
Berger, B.4
-
58
-
-
54549108798
-
Micrornas to nanog, oct4 and sox2 coding regions modulate embryonic stem cell differentiation
-
Tay, Y., Zhang, J., Thomson, A. M., Lim, B., and Rigoutsos, I. (2008) MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation. Nature 455, 1124-1128
-
(2008)
Nature
, vol.455
, pp. 1124-1128
-
-
Tay, Y.1
Zhang, J.2
Thomson, A.M.3
Lim, B.4
Rigoutsos, I.5
-
59
-
-
67749132423
-
Argonaute hits-clip decodes microrna-mrna interaction maps
-
Chi, S. W., Zang, J. B., Mele, A., and Darnell, R. B. (2009) Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. Nature 460, 479-486
-
(2009)
Nature
, vol.460
, pp. 479-486
-
-
Chi, S.W.1
Zang, J.B.2
Mele, A.3
Darnell, R.B.4
-
60
-
-
77950920903
-
Transcriptome-wide identification of rna-binding protein and microrna target sites by par-clip
-
Hafner, M., Landthaler, M., Burger, L., Khorshid, M., Hausser, J., Berninger, P., Rothballer, A., Ascano, M., Jr., Jungkamp, A. C., Munschauer, M., Ulrich, A., Wardle, G. S., Dewell, S., Zavolan, M., and Tuschl, T. (2010) Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. Cell 141, 129-141
-
(2010)
Cell
, vol.141
, pp. 129-141
-
-
Hafner, M.1
Landthaler, M.2
Burger, L.3
Khorshid, M.4
Hausser, J.5
Berninger, P.6
Rothballer, A.7
Ascano Jr., M.8
Jungkamp, A.C.9
Munschauer, M.10
Ulrich, A.11
Wardle, G.S.12
Dewell, S.13
Zavolan, M.14
Tuschl, T.15
-
61
-
-
59649125888
-
Biological basis for restriction of microrna targets to the 3' untranslated region in mammalian mrnas
-
Gu, S., Jin, L., Zhang, F., Sarnow, P., and Kay, M. A. (2009) Biological basis for restriction of microRNA targets to the 3' untranslated region in mammalian mRNAs. Nat. Struct. Mol. Biol. 16, 144-150
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 144-150
-
-
Gu, S.1
Jin, L.2
Zhang, F.3
Sarnow, P.4
Kay, M.A.5
-
62
-
-
79955096237
-
Viral microrna target allows insight into the role of translation in governing microrna target accessibility
-
Lin, H. R., and Ganem, D. (2011) Viral microRNA target allows insight into the role of translation in governing microRNA target accessibility. Proc. Natl. Acad. Sci. U.S.A. 108, 5148-5153
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 5148-5153
-
-
Lin, H.R.1
Ganem, D.2
|