-
1
-
-
84902601250
-
High-throughput sequencing of microbial communities in poro cheese, an artisanal Mexican cheese
-
Aldrete-Tapia, A., M. C., Escobar-Ramírez, M. L., Tamplin, and M., Hernández-Iturriaga. 2014. High-throughput sequencing of microbial communities in poro cheese, an artisanal Mexican cheese. Food Microbiology 44:136–41.
-
(2014)
Food Microbiology
, vol.44
, pp. 136-141
-
-
Aldrete-Tapia, A.1
Escobar-Ramírez, M.C.2
Tamplin, M.L.3
Hernández-Iturriaga, M.4
-
2
-
-
84924294947
-
Construction of a dairy microbial genome catalog opens new perspectives for the metagenomic analysis of dairy fermented products
-
Almeida, M., A., Hébert, A.-L., Abraham, S., Rasmussen, C., Monnet, N., Pons, C., Delbès, V., Loux, J.-M., Batto, P., Leonard, et al. 2014. Construction of a dairy microbial genome catalog opens new perspectives for the metagenomic analysis of dairy fermented products. BMC Genomics 15 (1):1101.
-
(2014)
BMC Genomics
, vol.15
, Issue.1
, pp. 1101
-
-
Almeida, M.1
Hébert, A.2
Abraham, A.-L.3
Rasmussen, S.4
Monnet, C.5
Pons, N.6
Delbès, C.7
Loux, V.8
Batto, J.-M.9
Leonard, P.10
-
3
-
-
84961238222
-
Functional proteomics within the genus lactobacillus
-
Angelis, M., M., Calasso, N., Cavallo, R., Di Cagno, and M., Gobbetti. 2016. Functional proteomics within the genus lactobacillus. Proteomics 16 (6):946–62.
-
(2016)
Proteomics
, vol.16
, Issue.6
, pp. 946-962
-
-
Angelis, M.1
Calasso, M.2
Cavallo, N.3
Di Cagno, R.4
Gobbetti, M.5
-
4
-
-
84884842381
-
Dairy products and the risk of type 2 diabetes: A systematic review and dose-response meta-analysis of cohort studies
-
Aune, D., T., Norat, P., Romundstad, and L. J., Vatten. 2013. Dairy products and the risk of type 2 diabetes: A systematic review and dose-response meta-analysis of cohort studies. The American Journal of Clinical Nutrition 98 (4):1066–83.
-
(2013)
The American Journal of Clinical Nutrition
, vol.98
, Issue.4
, pp. 1066-1083
-
-
Aune, D.1
Norat, T.2
Romundstad, P.3
Vatten, L.J.4
-
5
-
-
0037162469
-
Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
-
Bernstein, J. A., A. B., Khodursky, P.-H., Lin, S., Lin-Chao, and S. N., Cohen. 2002. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proceedings of the National Academy of Sciences of the United States of America 99 (15):9697–702.
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.15
, pp. 9697-9702
-
-
Bernstein, J.A.1
Khodursky, A.B.2
Lin, P.-H.3
Lin-Chao, S.4
Cohen, S.N.5
-
6
-
-
84884235124
-
Facility-specific “house” microbiome drives microbial landscapes of artisan cheesemaking plants
-
Bokulich, N. A., and D. A., Mills. 2013. Facility-specific “house” microbiome drives microbial landscapes of artisan cheesemaking plants. Applied and Environmental Microbiology 79 (17):5214–23.
-
(2013)
Applied and Environmental Microbiology
, vol.79
, Issue.17
, pp. 5214-5223
-
-
Bokulich, N.A.1
Mills, D.A.2
-
7
-
-
0035021812
-
The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403
-
Bolotin, A., P., Wincker, S., Mauger, O., Jaillon, K., Malarme, J., Weissenbach, S. D., Ehrlich, and A., Sorokin. 2001. The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403. Genome Research 11 (5):731–53.
-
(2001)
Genome Research
, vol.11
, Issue.5
, pp. 731-753
-
-
Bolotin, A.1
Wincker, P.2
Mauger, S.3
Jaillon, O.4
Malarme, K.5
Weissenbach, J.6
Ehrlich, S.D.7
Sorokin, A.8
-
8
-
-
84857044523
-
Food fermentations: Microorganisms with technological beneficial use
-
Bourdichon, F., S., Casaregola, C., Farrokh, J. C., Frisvad, M. L., Gerds, W. P., Hammes, J., Harnett, G., Huys, S., Laulund, and A., Ouwehand. 2012. Food fermentations: Microorganisms with technological beneficial use. International Journal of Food Microbiology 154 (3):87–97.
-
(2012)
International Journal of Food Microbiology
, vol.154
, Issue.3
, pp. 87-97
-
-
Bourdichon, F.1
Casaregola, S.2
Farrokh, C.3
Frisvad, J.C.4
Gerds, M.L.5
Hammes, W.P.6
Harnett, J.7
Huys, G.8
Laulund, S.9
Ouwehand, A.10
-
9
-
-
84889572692
-
Gas chromatography analysis with olfactometric detection (GC-O) as a useful methodology for chemical characterization of odorous compounds
-
Brattoli, M., E., Cisternino, P. R., Dambruoso, G., De Gennaro, P., Giungato, A., Mazzone, J., Palmisani, and M., Tutino. 2013. Gas chromatography analysis with olfactometric detection (GC-O) as a useful methodology for chemical characterization of odorous compounds. Sensors 13 (12):16759–800.
-
(2013)
Sensors
, vol.13
, Issue.12
, pp. 16759-16800
-
-
Brattoli, M.1
Cisternino, E.2
Dambruoso, P.R.3
De Gennaro, G.4
Giungato, P.5
Mazzone, A.6
Palmisani, J.7
Tutino, M.8
-
10
-
-
80054944568
-
Growth of Lactobacillus paracasei ATCC 334 in a cheese model system: A biochemical approach
-
Budinich, M. F., I., Perez-Díaz, H., Cai, S. A., Rankin, J. R., Broadbent, and J. L., Steele. 2011. Growth of Lactobacillus paracasei ATCC 334 in a cheese model system: A biochemical approach. Journal of Dairy Science 94 (11):5263–77.
-
(2011)
Journal of Dairy Science
, vol.94
, Issue.11
, pp. 5263-5277
-
-
Budinich, M.F.1
Perez-Díaz, I.2
Cai, H.3
Rankin, S.A.4
Broadbent, J.R.5
Steele, J.L.6
-
11
-
-
70449705857
-
OMICS-rooted studies of milk proteins, oligosaccharides and lipids
-
Casado, B., M., Affolter, and M., Kussmann. 2009. OMICS-rooted studies of milk proteins, oligosaccharides and lipids. Journal of Proteomics 73 (2):196–208.
-
(2009)
Journal of Proteomics
, vol.73
, Issue.2
, pp. 196-208
-
-
Casado, B.1
Affolter, M.2
Kussmann, M.3
-
12
-
-
84982113708
-
Cheese consumption and risk of cardiovascular disease: a Meta-analysis of prospective studies
-
Chen, G.-C., Y., Wang, X., Tong, I. M. Y., Szeto, G., Smit, Z.-N., Li, and L.-Q., Qin. 2017. Cheese consumption and risk of cardiovascular disease: a Meta-analysis of prospective studies. European Journal of Nutrition 56 (8):2565–75.
-
(2017)
European Journal of Nutrition
, vol.56
, Issue.8
, pp. 2565-2575
-
-
Chen, G.-C.1
Wang, Y.2
Tong, X.3
Szeto, I.M.Y.4
Smit, G.5
Li, Z.-N.6
Qin, L.-Q.7
-
13
-
-
32944478966
-
Effects of calcium, dairy product, and vitamin d supplementation on bone mass accrual and body composition in 10–12-y-old girls: a 2-y randomized trial
-
Cheng, S., A., Lyytikäinen, H., Kröger, C., Lamberg-Allardt, M., Alén, A., Koistinen, Q. J., Wang, M., Suuriniemi, H., Suominen, A., Mahonen, et al. 2005. Effects of calcium, dairy product, and vitamin d supplementation on bone mass accrual and body composition in 10–12-y-old girls: a 2-y randomized trial. The American Journal of Clinical Nutrition 82 (5):1115–26.
-
(2005)
The American Journal of Clinical Nutrition
, vol.82
, Issue.5
, pp. 1115-1126
-
-
Cheng, S.1
Lyytikäinen, A.2
Kröger, H.3
Lamberg-Allardt, C.4
Alén, M.5
Koistinen, A.6
Wang, Q.J.7
Suuriniemi, M.8
Suominen, H.9
Mahonen, A.10
-
15
-
-
85034051945
-
Next generation microbiological risk assessment Meta-omics: The next need for integration
-
Cocolin, L., M., Mataragas, F., Bourdichon, A., Doulgeraki, M.-F., Pilet, B., Jagadeesan, K., Rantsiou, and T., Phister. 2017. Next generation microbiological risk assessment Meta-omics: The next need for integration. International Journal of Food Microbiology. doi:10.1016/j.ijfoodmicro.2017.11.008
-
(2017)
International Journal of Food Microbiology
-
-
Cocolin, L.1
Mataragas, M.2
Bourdichon, F.3
Doulgeraki, A.4
Pilet, M.-F.5
Jagadeesan, B.6
Rantsiou, K.7
Phister, T.8
-
17
-
-
79251622771
-
Dynamic analysis of the Lactococcus lactis transcriptome in cheeses made from milk concentrated by ultrafiltration reveals multiple strategies of adaptation to stresses
-
et al., and
-
Cretenet, M., V., Laroute, V., Ulvé, S., Jeanson, S., Nouaille, S., Even, M., Piot, L., Girbal, Y., Le Loir, P., Loubière, et al., and M., Cocaign-Bousquet. 2011. Dynamic analysis of the Lactococcus lactis transcriptome in cheeses made from milk concentrated by ultrafiltration reveals multiple strategies of adaptation to stresses. Applied and Environmental Microbiology 77 (1):247–57.
-
(2011)
Applied and Environmental Microbiology
, vol.77
, Issue.1
, pp. 247-257
-
-
Cretenet, M.1
Laroute, V.2
Ulvé, V.3
Jeanson, S.4
Nouaille, S.5
Even, S.6
Piot, M.7
Girbal, L.8
Le Loir, Y.9
Loubière, P.10
Cocaign-Bousquet, M.11
-
18
-
-
67651098830
-
Probiotic cheese: Health benefits, technological and stability aspects
-
da Cruz, A. G., F. C. A., Buriti, C. H. B., de Souza, J. A. F., Faria, and S. M. I., Saad. 2009. Probiotic cheese: Health benefits, technological and stability aspects. Trends in Food Science and Technology 20 (8):344–54.
-
(2009)
Trends in Food Science and Technology
, vol.20
, Issue.8
, pp. 344-354
-
-
da Cruz, A.G.1
Buriti, F.C.A.2
de Souza, C.H.B.3
Faria, J.A.F.4
Saad, S.M.I.5
-
19
-
-
84905030768
-
Comprehensive peptidomic and glycomic evaluation reveals that sweet whey permeate from colostrum is a source of milk protein-derived peptides and oligosaccharides
-
Dallas, D. C., V., Weinborn, J. M., de Moura Bell, M., Wang, E. A., Parker, A., Guerrero, K. A., Hettinga, C. B., Lebrilla, J. B., German, and D., Barile. 2014. Comprehensive peptidomic and glycomic evaluation reveals that sweet whey permeate from colostrum is a source of milk protein-derived peptides and oligosaccharides. Food Research International 63:203–9.
-
(2014)
Food Research International
, vol.63
, pp. 203-209
-
-
Dallas, D.C.1
Weinborn, V.2
de Moura Bell, J.M.3
Wang, M.4
Parker, E.A.5
Guerrero, A.6
Hettinga, K.A.7
Lebrilla, C.B.8
German, J.B.9
Barile, D.10
-
20
-
-
84855849594
-
A temporal-omic study of Propionibacterium freudenreichii CIRM-BIA1T adaptation strategies in conditions mimicking cheese ripening in the cold
-
Dalmasso, M., J., Aubert, V., Briard-Bion, V., Chuat, S.-M., Deutsch, S., Even, H., Falentin, G., Jan, J., Jardin, M.-B., Maillard, et al. 2012. A temporal-omic study of Propionibacterium freudenreichii CIRM-BIA1T adaptation strategies in conditions mimicking cheese ripening in the cold. PLoS One 7 (1):e29083.
-
(2012)
PLoS One
, vol.7
, Issue.1
-
-
Dalmasso, M.1
Aubert, J.2
Briard-Bion, V.3
Chuat, V.4
Deutsch, S.-M.5
Even, S.6
Falentin, H.7
Jan, G.8
Jardin, J.9
Maillard, M.-B.10
-
21
-
-
84903128093
-
Comparison and validation of some ITS primer pairs useful for fungal metabarcoding studies
-
De Beeck, M. O., B., Lievens, P., Busschaert, S., Declerck, J., Vangronsveld, and J. V., Colpaert. 2014. Comparison and validation of some ITS primer pairs useful for fungal metabarcoding studies. PLoS One 9 (6):e97629.
-
(2014)
PLoS One
, vol.9
, Issue.6
-
-
De Beeck, M.O.1
Lievens, B.2
Busschaert, P.3
Declerck, S.4
Vangronsveld, J.5
Colpaert, J.V.6
-
22
-
-
84959450101
-
Metatranscriptomics reveals temperature-driven functional changes in microbiome impacting cheese maturation rate
-
De Filippis, F., A., Genovese, P., Ferranti, J. A., Gilbert, and D., Ercolini. 2016. Metatranscriptomics reveals temperature-driven functional changes in microbiome impacting cheese maturation rate. Scientific Reports 6 (1):21871.
-
(2016)
Scientific Reports
, vol.6
, Issue.1
, pp. 21871
-
-
De Filippis, F.1
Genovese, A.2
Ferranti, P.3
Gilbert, J.A.4
Ercolini, D.5
-
23
-
-
84990855887
-
Metagenomics insights into food fermentations
-
De Filippis, F., E., Parente, and D., Ercolini. 2017. Metagenomics insights into food fermentations. Applied Microbiology and Biotechnology 10 (1):91–102.
-
(2017)
Applied Microbiology and Biotechnology
, vol.10
, Issue.1
, pp. 91-102
-
-
De Filippis, F.1
Parente, E.2
Ercolini, D.3
-
24
-
-
84908054105
-
Microbiota characterization of a Belgian protected designation of origin cheese, herve cheese, using metagenomic analysis
-
Delcenserie, V., B., Taminiau, L., Delhalle, C., Nezer, P., Doyen, S., Crevecoeur, D., Roussey, N., Korsak, and G., Daube. 2014. Microbiota characterization of a Belgian protected designation of origin cheese, herve cheese, using metagenomic analysis. Journal of Dairy Science 97 (10):6046–56.
-
(2014)
Journal of Dairy Science
, vol.97
, Issue.10
, pp. 6046-6056
-
-
Delcenserie, V.1
Taminiau, B.2
Delhalle, L.3
Nezer, C.4
Doyen, P.5
Crevecoeur, S.6
Roussey, D.7
Korsak, N.8
Daube, G.9
-
25
-
-
26644445945
-
The Lactococcus lactis CodY regulon: Identification of a conserved cis-regulatory element
-
Den Hengst, C. D., S. A., van Hijum, J. M., Geurts, A., Nauta, J., Kok, and O. P., Kuipers. 2005. The Lactococcus lactis CodY regulon: Identification of a conserved cis-regulatory element. The Journal of Biological Chemistry 280 (40):34332–42.
-
(2005)
The Journal of Biological Chemistry
, vol.280
, Issue.40
, pp. 34332-34342
-
-
Den Hengst, C.D.1
van Hijum, S.A.2
Geurts, J.M.3
Nauta, A.4
Kok, J.5
Kuipers, O.P.6
-
26
-
-
85010369319
-
Current and future perspectives on the structural identification of small molecules in biological systems
-
Dias, D. A., O. A., Jones, D. J., Beale, B. A., Boughton, D., Benheim, K. A., Kouremenos, J.-L., Wolfender, and D. S., Wishart. 2016. Current and future perspectives on the structural identification of small molecules in biological systems. Metabolites 6 (4):46.
-
(2016)
Metabolites
, vol.6
, Issue.4
, pp. 46
-
-
Dias, D.A.1
Jones, O.A.2
Beale, D.J.3
Boughton, B.A.4
Benheim, D.5
Kouremenos, K.A.6
Wolfender, J.-L.7
Wishart, D.S.8
-
27
-
-
85024494670
-
Progress in metabolomics standardisation and its significance in future clinical laboratory medicine
-
Dias, D. A., and T., Koal. 2016. Progress in metabolomics standardisation and its significance in future clinical laboratory medicine. EJIFCC 27 (4):331.
-
(2016)
EJIFCC
, vol.27
, Issue.4
, pp. 331
-
-
Dias, D.A.1
Koal, T.2
-
28
-
-
84906841405
-
Functional genomics of lactic acid bacteria: from food to health
-
Douillard, F. P., and W. M., De Vos. 2014. Functional genomics of lactic acid bacteria: from food to health. Microbial Cell Factories 13 (1):S8.
-
(2014)
Microbial Cell Factories
, vol.13
, Issue.1
, pp. S8
-
-
Douillard, F.P.1
De Vos, W.M.2
-
29
-
-
50549085977
-
Growth rate regulated genes and their wide involvement in the Lactococcus lactis stress responses
-
Dressaire, C., E., Redon, H., Milhem, P., Besse, P., Loubière, and M., Cocaign-Bousquet. 2008. Growth rate regulated genes and their wide involvement in the Lactococcus lactis stress responses. BMC Genomics 9 (1):343.
-
(2008)
BMC Genomics
, vol.9
, Issue.1
, pp. 343
-
-
Dressaire, C.1
Redon, E.2
Milhem, H.3
Besse, P.4
Loubière, P.5
Cocaign-Bousquet, M.6
-
30
-
-
84989332544
-
Highlighting the microbial diversity of 12 french cheese varieties
-
Dugat-Bony, E., L., Garnier, J., Denonfoux, S., Ferreira, A.-S., Sarthou, P., Bonnarme, and F., Irlinger. 2016. Highlighting the microbial diversity of 12 french cheese varieties. International Journal of Food Microbiology 238:265–73.
-
(2016)
International Journal of Food Microbiology
, vol.238
, pp. 265-273
-
-
Dugat-Bony, E.1
Garnier, L.2
Denonfoux, J.3
Ferreira, S.4
Sarthou, A.-S.5
Bonnarme, P.6
Irlinger, F.7
-
31
-
-
84928911036
-
Overview of a surface-ripened cheese community functioning by meta-omics analyses
-
Dugat-Bony, E., C., Straub, A., Teissandier, D., Onésime, V., Loux, C., Monnet, F., Irlinger, S., Landaud, M.-N., Leclercq-Perlat, P., Bento, et al. 2015. Overview of a surface-ripened cheese community functioning by meta-omics analyses. PloS One 10 (4):e0124360.
-
(2015)
PloS One
, vol.10
, Issue.4
-
-
Dugat-Bony, E.1
Straub, C.2
Teissandier, A.3
Onésime, D.4
Loux, V.5
Monnet, C.6
Irlinger, F.7
Landaud, S.8
Leclercq-Perlat, M.-N.9
Bento, P.10
-
32
-
-
0034941874
-
Respiration capacity of the fermenting bacterium Lactococcus lactis and its positive effects on growth and survival
-
Duwat, P., S., Sourice, B., Cesselin, G., Lamberet, K., Vido, P., Gaudu, Y., Le Loir, F., Violet, P., Loubière, and A., Gruss. 2001. Respiration capacity of the fermenting bacterium Lactococcus lactis and its positive effects on growth and survival. Journal of Bacteriology 183 (15):4509–16.
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.15
, pp. 4509-4516
-
-
Duwat, P.1
Sourice, S.2
Cesselin, B.3
Lamberet, G.4
Vido, K.5
Gaudu, P.6
Le Loir, Y.7
Violet, F.8
Loubière, P.9
Gruss, A.10
-
33
-
-
43049162903
-
Proteomic analysis of the cyanobacterium of the azolla symbiosis: identity, adaptation, and NifH modification
-
Ekman, M., P., Tollbäck, and B., Bergman. 2008. Proteomic analysis of the cyanobacterium of the azolla symbiosis: identity, adaptation, and NifH modification. Journal of Experimental Botany 59 (5):1023–34.
-
(2008)
Journal of Experimental Botany
, vol.59
, Issue.5
, pp. 1023-1034
-
-
Ekman, M.1
Tollbäck, P.2
Bergman, B.3
-
34
-
-
84877133975
-
High-throughput sequencing and metagenomics: Moving forward in the culture-independent analysis of food microbial ecology
-
Ercolini, D. 2013. High-throughput sequencing and metagenomics: Moving forward in the culture-independent analysis of food microbial ecology. Applied and Environmental Microbiology 79 (10):3148–55.
-
(2013)
Applied and Environmental Microbiology
, vol.79
, Issue.10
, pp. 3148-3155
-
-
Ercolini, D.1
-
35
-
-
84868610117
-
Remake’ by high-throughput sequencing of the microbiota involved in the production of water buffalo mozzarella cheese
-
Ercolini, D., F., De Filippis, A., La Storia, and M., Iacono. 2012. Remake’ by high-throughput sequencing of the microbiota involved in the production of water buffalo mozzarella cheese. Applied and Environmental Microbiology 78 (22):8142–5.
-
(2012)
Applied and Environmental Microbiology
, vol.78
, Issue.22
, pp. 8142-8145
-
-
Ercolini, D.1
De Filippis, F.2
La Storia, A.3
Iacono, M.4
-
36
-
-
84959376703
-
Metagenomic analysis of a Mexican ripened cheese reveals a unique complex microbiota
-
Escobar-Zepeda, A., A., Sanchez-Flores, and M. Q., Baruch. 2016. Metagenomic analysis of a Mexican ripened cheese reveals a unique complex microbiota. Food Microbiology 57:116–27.
-
(2016)
Food Microbiology
, vol.57
, pp. 116-127
-
-
Escobar-Zepeda, A.1
Sanchez-Flores, A.2
Baruch, M.Q.3
-
37
-
-
77955388627
-
The complete genome of Propionibacterium freudenreichii CIRM-BIA1 T, a hardy actinobacterium with food and probiotic applications
-
Falentin, H., S.-M., Deutsch, G., Jan, V., Loux, A., Thierry, S., Parayre, M.-B., Maillard, J., Dherbécourt, F. J., Cousin, J., Jardin, et al. 2010. The complete genome of Propionibacterium freudenreichii CIRM-BIA1 T, a hardy actinobacterium with food and probiotic applications. PloS One 5 (7):e11748.
-
(2010)
PloS One
, vol.5
, Issue.7
-
-
Falentin, H.1
Deutsch, S.-M.2
Jan, G.3
Loux, V.4
Thierry, A.5
Parayre, S.6
Maillard, M.-B.7
Dherbécourt, J.8
Cousin, F.J.9
Jardin, J.10
-
38
-
-
78149464574
-
Specific metabolic activity of ripening bacteria quantified by real-time reverse transcription PCR throughout emmental cheese manufacture
-
Falentin, H., F., Postollec, S., Parayre, N., Henaff, P., Le Bivic, R., Richoux, A., Thierry, and D., Sohier. 2010. Specific metabolic activity of ripening bacteria quantified by real-time reverse transcription PCR throughout emmental cheese manufacture. International Journal of Food Microbiology 144 (1):10–9.
-
(2010)
International Journal of Food Microbiology
, vol.144
, Issue.1
, pp. 10-19
-
-
Falentin, H.1
Postollec, F.2
Parayre, S.3
Henaff, N.4
Le Bivic, P.5
Richoux, R.6
Thierry, A.7
Sohier, D.8
-
39
-
-
85040680949
-
Shotgun metagenomics and volatilome profile of the microbiota of fermented sausages
-
Ferrocino, I., A., Bellio, M., Giordano, G., Macori, A., Romano, K., Rantsiou, L., Decastelli, and L., Cocolin. 2018. Shotgun metagenomics and volatilome profile of the microbiota of fermented sausages. Applied and Environmental Microbiology 84 (3):e02120–17.
-
(2018)
Applied and Environmental Microbiology
, vol.84
, Issue.3
, pp. e02120-e2117
-
-
Ferrocino, I.1
Bellio, A.2
Giordano, M.3
Macori, G.4
Romano, A.5
Rantsiou, K.6
Decastelli, L.7
Cocolin, L.8
-
40
-
-
0033757963
-
Metabolite profiling for plant functional genomics
-
Fiehn, O., J., Kopka, P., Dörmann, T., Altmann, R. N., Trethewey, and L., Willmitzer. 2000. Metabolite profiling for plant functional genomics. Nature Biotechnology 18 (11):1157
-
(2000)
Nature Biotechnology
, vol.18
, Issue.11
, pp. 1157
-
-
Fiehn, O.1
Kopka, J.2
Dörmann, P.3
Altmann, T.4
Trethewey, R.N.5
Willmitzer, L.6
-
41
-
-
79953198286
-
Global regulation of the response to sulfur availability in the cheese-related bacterium Brevibacterium aurantiacum
-
Forquin, M.-P., A., Hébert, A., Roux, J., Aubert, C., Proux, J.-F., Heilier, S., Landaud, C., Junot, P., Bonnarme, and I., Martin-Verstraete. 2011. Global regulation of the response to sulfur availability in the cheese-related bacterium Brevibacterium aurantiacum. Applied and Environmental Microbiology 77 (4):1449–59.
-
(2011)
Applied and Environmental Microbiology
, vol.77
, Issue.4
, pp. 1449-1459
-
-
Forquin, M.-P.1
Hébert, A.2
Roux, A.3
Aubert, J.4
Proux, C.5
Heilier, J.-F.6
Landaud, S.7
Junot, C.8
Bonnarme, P.9
Martin-Verstraete, I.10
-
42
-
-
0004268805
-
-
New York, NY: Springer Science & Business Media
-
Fox, P. 2000. Fundamentals of cheese science. New York, NY: Springer Science & Business Media.
-
(2000)
Fundamentals of cheese science
-
-
Fox, P.1
-
43
-
-
84929512453
-
Sequencing and beyond: Integrating molecular 'omics' for microbial community profiling
-
Franzosa, E. A., T., Hsu, A., Sirota-Madi, A., Shafquat, G., Abu-Ali, X. C., Morgan, and C., Huttenhower. 2015. Sequencing and beyond: Integrating molecular 'omics' for microbial community profiling. Nature Reviews Microbiology 13 (6):360–72.
-
(2015)
Nature Reviews Microbiology
, vol.13
, Issue.6
, pp. 360-372
-
-
Franzosa, E.A.1
Hsu, T.2
Sirota-Madi, A.3
Shafquat, A.4
Abu-Ali, G.5
Morgan, X.C.6
Huttenhower, C.7
-
44
-
-
84940850112
-
Olfactometry profiles and quantitation of volatile sulfur compounds of Swiss tilsit cheeses
-
Fuchsmann, P., M. T., Stern, Y.-A., Brügger, and K., Breme. 2015. Olfactometry profiles and quantitation of volatile sulfur compounds of Swiss tilsit cheeses. Journal of Agricultural and Food Chemistry 63 (34):7511–21.
-
(2015)
Journal of Agricultural and Food Chemistry
, vol.63
, Issue.34
, pp. 7511-7521
-
-
Fuchsmann, P.1
Stern, M.T.2
Brügger, Y.-A.3
Breme, K.4
-
45
-
-
84894241582
-
Dynamics of bacterial communities during the ripening process of different croatian cheese types derived from raw ewe's milk cheeses
-
Fuka, M. M., S., Wallisch, M., Engel, G., Welzl, J., Havranek, and M., Schloter. 2013. Dynamics of bacterial communities during the ripening process of different croatian cheese types derived from raw ewe's milk cheeses. PLoS One 8 (11):e80734.
-
(2013)
PLoS One
, vol.8
, Issue.11
-
-
Fuka, M.M.1
Wallisch, S.2
Engel, M.3
Welzl, G.4
Havranek, J.5
Schloter, M.6
-
46
-
-
61449163906
-
Invited review: Proteomics of milk and bacteria used in fermented dairy products: From qualitative to quantitative advances
-
Gagnaire, V., J., Jardin, G., Jan, and S., Lortal. 2009. Invited review: Proteomics of milk and bacteria used in fermented dairy products: From qualitative to quantitative advances. Journal of Dairy Science 92 (3):811–25.
-
(2009)
Journal of Dairy Science
, vol.92
, Issue.3
, pp. 811-825
-
-
Gagnaire, V.1
Jardin, J.2
Jan, G.3
Lortal, S.4
-
47
-
-
0035179295
-
Enhancement of immunity in the elderly by dietary supplementation with the probiotic Bifidobacterium lactis HN019
-
Gill, H. S., K. J., Rutherfurd, M. L., Cross, and P. K., Gopal. 2001. Enhancement of immunity in the elderly by dietary supplementation with the probiotic Bifidobacterium lactis HN019. The American Journal of Clinical Nutrition 74 (6):833–9.
-
(2001)
The American Journal of Clinical Nutrition
, vol.74
, Issue.6
, pp. 833-839
-
-
Gill, H.S.1
Rutherfurd, K.J.2
Cross, M.L.3
Gopal, P.K.4
-
48
-
-
51649108378
-
Bioactive peptides in dairy products
-
Hui. Y.H., (ed), Hoboken, NJ: John Wiley & Sons, Inc, and,. ed
-
Gobbetti, M., F., Minervini, and C. G., Rizzello. 2007. Bioactive peptides in dairy products. In Handbook of food products manufacturing, ed. Y. H., Hui., 489–517. Hoboken, NJ: John Wiley & Sons, Inc.
-
(2007)
Handbook of food products manufacturing
, pp. 489-517
-
-
Gobbetti, M.1
Minervini, F.2
Rizzello, C.G.3
-
49
-
-
1942470073
-
Metabolomics by numbers: Acquiring and understanding global metabolite data
-
Goodacre, R., S., Vaidyanathan, W. B., Dunn, G. G., Harrigan, and D. B., Kell. 2004. Metabolomics by numbers: Acquiring and understanding global metabolite data. Trends in Biotechnology 22 (5):245–52.
-
(2004)
Trends in Biotechnology
, vol.22
, Issue.5
, pp. 245-252
-
-
Goodacre, R.1
Vaidyanathan, S.2
Dunn, W.B.3
Harrigan, G.G.4
Kell, D.B.5
-
50
-
-
85019387419
-
Network-based analysis of omics data: The LEAN method
-
Gwinner, F., G., Boulday, C., Vandiedonck, M., Arnould, C., Cardoso, I., Nikolayeva, O., Guitart-Pla, C. V., Denis, O. D., Christophe, J., Beghain, et al. 2017. Network-based analysis of omics data: The LEAN method. Bioinformatics (Oxford, England) 33 (5):701–9.
-
(2017)
Bioinformatics (Oxford, England)
, vol.33
, Issue.5
, pp. 701-709
-
-
Gwinner, F.1
Boulday, G.2
Vandiedonck, C.3
Arnould, M.4
Cardoso, C.5
Nikolayeva, I.6
Guitart-Pla, O.7
Denis, C.V.8
Christophe, O.D.9
Beghain, J.10
-
51
-
-
67650021209
-
Microbial community profiling for human microbiome projects: Tools, techniques, and challenges
-
Hamady, M., and R., Knight. 2009. Microbial community profiling for human microbiome projects: Tools, techniques, and challenges. Genome Research 19 (7):1141–52.
-
(2009)
Genome Research
, vol.19
, Issue.7
, pp. 1141-1152
-
-
Hamady, M.1
Knight, R.2
-
53
-
-
10344227692
-
Metagenomics: Application of genomics to uncultured microorganisms
-
Handelsman, J. 2004. Metagenomics: Application of genomics to uncultured microorganisms. Microbiology and Molecular Biology Reviews 68 (4):669–85.
-
(2004)
Microbiology and Molecular Biology Reviews
, vol.68
, Issue.4
, pp. 669-685
-
-
Handelsman, J.1
-
54
-
-
84860140596
-
Proteomic study of proteolysis during ripening of cheddar cheese made from milk over a lactation cycle
-
Hinz, K., P. M., O'Connor, B., O'Brien, T., Huppertz, R. P., Ross, and A. L., Kelly. 2012. Proteomic study of proteolysis during ripening of cheddar cheese made from milk over a lactation cycle. The Journal of Dairy Research 79 (2):176–84.
-
(2012)
The Journal of Dairy Research
, vol.79
, Issue.2
, pp. 176-184
-
-
Hinz, K.1
O'Connor, P.M.2
O'Brien, B.3
Huppertz, T.4
Ross, R.P.5
Kelly, A.L.6
-
55
-
-
0031662188
-
Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
-
Hugenholtz, P., B. M., Goebel, and N. R., Pace. 1998. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. Journal of Bacteriology 180 (18):4765–74.
-
(1998)
Journal of Bacteriology
, vol.180
, Issue.18
, pp. 4765-4774
-
-
Hugenholtz, P.1
Goebel, B.M.2
Pace, N.R.3
-
56
-
-
84855951980
-
Ecological and aromatic impact of two gram-negative bacteria (Psychrobacter celer and Hafnia alvei) inoculated as part of the whole microbial community of an experimental smear soft cheese
-
Irlinger, F., S. A. Y., In Yung, A.-S., Sarthou, C., Delbès-Paus, M.-C., Montel, E., Coton, M., Coton, and S., Helinck. 2012. Ecological and aromatic impact of two gram-negative bacteria (Psychrobacter celer and Hafnia alvei) inoculated as part of the whole microbial community of an experimental smear soft cheese. International Journal of Food Microbiology 153 (3):332–8.
-
(2012)
International Journal of Food Microbiology
, vol.153
, Issue.3
, pp. 332-338
-
-
Irlinger, F.1
In Yung, S.A.Y.2
Sarthou, A.-S.3
Delbès-Paus, C.4
Montel, M.-C.5
Coton, E.6
Coton, M.7
Helinck, S.8
-
57
-
-
84857913661
-
Quantitative proteomic analysis of bacterial enzymes released in cheese during ripening
-
Jardin, J., D., Mollé, M., Piot, S., Lortal, and V. R, Gagnaire. 2012. Quantitative proteomic analysis of bacterial enzymes released in cheese during ripening. International Journal of Food Microbiology 155 (1–2):19–28.
-
(2012)
International Journal of Food Microbiology
, vol.155
, Issue.1-2
, pp. 19-28
-
-
Jardin, J.1
Mollé, D.2
Piot, M.3
Lortal, S.4
Gagnaire, V.R.5
-
58
-
-
84959907987
-
Metabolomic technologies for improving the quality of food: Practice and promise
-
Johanningsmeier, S. D., G. K., Harris, and C. M., Klevorn. 2016. Metabolomic technologies for improving the quality of food: Practice and promise. Annual Review of Food Science and Technology 7:413–38.
-
(2016)
Annual Review of Food Science and Technology
, vol.7
, pp. 413-438
-
-
Johanningsmeier, S.D.1
Harris, G.K.2
Klevorn, C.M.3
-
59
-
-
84966430254
-
Characterization of the gut microbiome using 16S or shotgun metagenomics
-
Jovel, J., J., Patterson, W., Wang, N., Hotte, S., O'Keefe, T., Mitchel, T., Perry, D., Kao, A. L., Mason, K. L., Madsen, and G. K.-S., Wong. 2016. Characterization of the gut microbiome using 16S or shotgun metagenomics. Frontiers in Microbiology 7:459
-
(2016)
Frontiers in Microbiology
, vol.7
, pp. 459
-
-
Jovel, J.1
Patterson, J.2
Wang, W.3
Hotte, N.4
O'Keefe, S.5
Mitchel, T.6
Perry, T.7
Kao, D.8
Mason, A.L.9
Madsen, K.L.10
Wong, G.K.S.11
-
60
-
-
85042444724
-
The evolution of gene regulation research in Lactococcus lactis
-
Kok, J., L. A., van Gijtenbeek, A., de Jong, S. B., van der Meulen, A., Solopova, and O. P., Kuipers. 2017. The evolution of gene regulation research in Lactococcus lactis. FEMS Microbiology Reviews 41 (1):S220–S43.
-
(2017)
FEMS Microbiology Reviews
, vol.41
, Issue.1
, pp. S220-S43
-
-
Kok, J.1
van Gijtenbeek, L.A.2
de Jong, A.3
van der Meulen, S.B.4
Solopova, A.5
Kuipers, O.P.6
-
61
-
-
84919342677
-
Transcriptomic analysis of Lactococcus chungangensis sp. nov. and its potential in cheese making
-
Konkit, M., J.-H., Kim, N., Bora, and W., Kim. 2014. Transcriptomic analysis of Lactococcus chungangensis sp. nov. and its potential in cheese making. Journal of Dairy Science 97 (12):7363–72.
-
(2014)
Journal of Dairy Science
, vol.97
, Issue.12
, pp. 7363-7372
-
-
Konkit, M.1
Kim, J.-H.2
Bora, N.3
Kim, W.4
-
63
-
-
85076855694
-
-
Berlin, Germany: Springer
-
Kuipers, O. P., A., De Jong, R. J., Baerends, S. A., Van, A. L. Z., Hijum, H. A., Karsens, C. D., Den Hengst, N. E., Kramer, G., Buist, and J., Kok. 2002. Transcriptome analysis and related databases of Lactococcus lactis. Lactic acid bacteria: Genetics, metabolism and applications. Berlin, Germany: Springer.
-
(2002)
Transcriptome analysis and related databases of Lactococcus lactis. Lactic acid bacteria: Genetics, metabolism and applications
-
-
Kuipers, O.P.1
De Jong, A.2
Baerends, R.J.3
Van, S.A.4
Hijum, A.L.Z.5
Karsens, H.A.6
Den Hengst, C.D.7
Kramer, N.E.8
Buist, G.9
Kok, J.10
-
64
-
-
84925517557
-
Insights from 20 years of bacterial genome sequencing
-
Land, M., L., Hauser, S.-R., Jun, I., Nookaew, M. R., Leuze, T.-H., Ahn, T., Karpinets, O., Lund, G., Kora, T., Wassenaar, et al. 2015. Insights from 20 years of bacterial genome sequencing. Functional & Integrative Genomics 15 (2):141–61.
-
(2015)
Functional & Integrative Genomics
, vol.15
, Issue.2
, pp. 141-161
-
-
Land, M.1
Hauser, L.2
Jun, S.-R.3
Nookaew, I.4
Leuze, M.R.5
Ahn, T.-H.6
Karpinets, T.7
Lund, O.8
Kora, G.9
Wassenaar, T.10
-
65
-
-
84977647590
-
Transcriptome analysis of Lactococcus lactis subsp. lactis during milk acidification as affected by dissolved oxygen and the redox potential
-
Larsen, N., S., Moslehi-Jenabian, B. B., Werner, M. L., Jensen, C., Garrigues, F. K., Vogensen, and L., Jespersen. 2016. Transcriptome analysis of Lactococcus lactis subsp. lactis during milk acidification as affected by dissolved oxygen and the redox potential. International Journal of Food Microbiology 226:5–12.
-
(2016)
International Journal of Food Microbiology
, vol.226
, pp. 5-12
-
-
Larsen, N.1
Moslehi-Jenabian, S.2
Werner, B.B.3
Jensen, M.L.4
Garrigues, C.5
Vogensen, F.K.6
Jespersen, L.7
-
66
-
-
84973460231
-
Can the development and autolysis of lactic acid bacteria influence the cheese volatile fraction? The case of Grana Padano
-
Lazzi, C., M., Povolo, F., Locci, V., Bernini, E., Neviani, and M., Gatti. 2016. Can the development and autolysis of lactic acid bacteria influence the cheese volatile fraction? The case of Grana Padano. International Journal of Food Microbiology 233:20–8.
-
(2016)
International Journal of Food Microbiology
, vol.233
, pp. 20-28
-
-
Lazzi, C.1
Povolo, M.2
Locci, F.3
Bernini, V.4
Neviani, E.5
Gatti, M.6
-
67
-
-
84893711424
-
Transcriptomic clues to understand the growth of Lactobacillus rhamnosus in cheese
-
Lazzi, C., S., Turroni, A., Mancini, E., Sgarbi, E., Neviani, P., Brigidi, and M., Gatti. 2014. Transcriptomic clues to understand the growth of Lactobacillus rhamnosus in cheese. BMC Microbiology 14 (1):28
-
(2014)
BMC Microbiology
, vol.14
, Issue.1
, pp. 28
-
-
Lazzi, C.1
Turroni, S.2
Mancini, A.3
Sgarbi, E.4
Neviani, E.5
Brigidi, P.6
Gatti, M.7
-
68
-
-
84878410993
-
First mass spectrometry metabolic fingerprinting of bacterial metabolism in a model cheese
-
Le Boucher, C., F., Courant, S., Jeanson, S., Chereau, M. B., Maillard, A. L., Royer, A., Thierry, G., Dervilly-Pinel, B., Le Bizec, and S., Lortal. 2013. First mass spectrometry metabolic fingerprinting of bacterial metabolism in a model cheese. Food Chemistry 141 (2):1032–40.
-
(2013)
Food Chemistry
, vol.141
, Issue.2
, pp. 1032-1040
-
-
Le Boucher, C.1
Courant, F.2
Jeanson, S.3
Chereau, S.4
Maillard, M.B.5
Royer, A.L.6
Thierry, A.7
Dervilly-Pinel, G.8
Le Bizec, B.9
Lortal, S.10
-
69
-
-
84941024369
-
LC–HRMS fingerprinting as an efficient approach to highlight fine differences in cheese metabolome during ripening
-
Le Boucher, C., F., Courant, A.-L., Royer, S., Jeanson, S., Lortal, G., Dervilly-Pinel, A., Thierry, and B., Le Bizec. 2015. LC–HRMS fingerprinting as an efficient approach to highlight fine differences in cheese metabolome during ripening. Metabolomics 11 (5):1117–30.
-
(2015)
Metabolomics
, vol.11
, Issue.5
, pp. 1117-1130
-
-
Le Boucher, C.1
Courant, F.2
Royer, A.-L.3
Jeanson, S.4
Lortal, S.5
Dervilly-Pinel, G.6
Thierry, A.7
Le Bizec, B.8
-
70
-
-
84986573174
-
Characterisation of microbial diversity and chemical properties of cheddar cheese prepared from heat-treated milk
-
Lee, J. Y., J. Y., Joung, Y.-S., Choi, Y., Kim, and N. S., Oh. 2016. Characterisation of microbial diversity and chemical properties of cheddar cheese prepared from heat-treated milk. The International Dairy Journal 63:92–8.
-
(2016)
The International Dairy Journal
, vol.63
, pp. 92-98
-
-
Lee, J.Y.1
Joung, J.Y.2
Choi, Y.-S.3
Kim, Y.4
Oh, N.S.5
-
71
-
-
84899116596
-
Metatranscriptome analysis of fungal strains Penicillium camemberti and Geotrichum candidum reveal cheese matrix breakdown and potential development of sensory properties of ripened camembert-type cheese
-
Lessard, M.-H., C., Viel, B., Boyle, D., St-Gelais, and S., Labrie. 2014. Metatranscriptome analysis of fungal strains Penicillium camemberti and Geotrichum candidum reveal cheese matrix breakdown and potential development of sensory properties of ripened camembert-type cheese. BMC Genomics 15 (1):235.
-
(2014)
BMC Genomics
, vol.15
, Issue.1
, pp. 235
-
-
Lessard, M.-H.1
Viel, C.2
Boyle, B.3
St-Gelais, D.4
Labrie, S.5
-
72
-
-
85007409480
-
Lipidomics profiling of goat milk, soymilk and bovine milk by UPLC-Q-Exactive Orbitrap mass Spectrometry
-
Li, Q., Y., Zhao, D., Zhu, X., Pang, Y., Liu, R., Frew, and G., Chen. 2017. Lipidomics profiling of goat milk, soymilk and bovine milk by UPLC-Q-Exactive Orbitrap mass Spectrometry. Food Chemistry 224:302–9.
-
(2017)
Food Chemistry
, vol.224
, pp. 302-309
-
-
Li, Q.1
Zhao, Y.2
Zhu, D.3
Pang, X.4
Liu, Y.5
Frew, R.6
Chen, G.7
-
73
-
-
84947487970
-
Twenty years of bacterial genome sequencing
-
Loman, N. J., and M. J., Pallen. 2015. Twenty years of bacterial genome sequencing. Nature Reviews Microbiology 13 (12):787
-
(2015)
Nature Reviews Microbiology
, vol.13
, Issue.12
, pp. 787
-
-
Loman, N.J.1
Pallen, M.J.2
-
74
-
-
84868315308
-
Characterization of microflora in Latin-style cheeses by next-generation sequencing technology
-
Lusk, T. S., A. R., Ottesen, J. R., White, M. W., Allard, E. W., Brown, and J. A., Kase. 2012. Characterization of microflora in Latin-style cheeses by next-generation sequencing technology. BMC Microbiology 12 (1):254.
-
(2012)
BMC Microbiology
, vol.12
, Issue.1
, pp. 254
-
-
Lusk, T.S.1
Ottesen, A.R.2
White, J.R.3
Allard, M.W.4
Brown, E.W.5
Kase, J.A.6
-
75
-
-
84906351147
-
A control method to inspect the compositional authenticity of minas frescal cheese by gel electrophoresis
-
Magenis, R. B., E. S., Prudêncio, L., Molognoni, and H., Daguer. 2014. A control method to inspect the compositional authenticity of minas frescal cheese by gel electrophoresis. Journal of Agricultural and Food Chemistry 62 (33):8333–9.
-
(2014)
Journal of Agricultural and Food Chemistry
, vol.62
, Issue.33
, pp. 8333-8339
-
-
Magenis, R.B.1
Prudêncio, E.S.2
Molognoni, L.3
Daguer, H.4
-
76
-
-
33750341148
-
Comparative genomics of the lactic acid bacteria
-
Makarova, K., A., Slesarev, Y., Wolf, A., Sorokin, B., Mirkin, E., Koonin, A., Pavlov, N., Pavlova, V., Karamychev, N., Polouchine, et al. 2006. Comparative genomics of the lactic acid bacteria. Proceedings of the National Academy of Sciences of the United States of America 103 (42):15611–6.
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.42
, pp. 15611-15616
-
-
Makarova, K.1
Slesarev, A.2
Wolf, Y.3
Sorokin, A.4
Mirkin, B.5
Koonin, E.6
Pavlov, A.7
Pavlova, N.8
Karamychev, V.9
Polouchine, N.10
-
78
-
-
19744367828
-
Application of proteomics to the characterization of milk and dairy products
-
Manso, M., J., Léonil, G., Jan, and V., Gagnaire. 2005. Application of proteomics to the characterization of milk and dairy products. The International Dairy Journal 15 (6-9):845–55.
-
(2005)
The International Dairy Journal
, vol.15
, Issue.6-9
, pp. 845-855
-
-
Manso, M.1
Léonil, J.2
Jan, G.3
Gagnaire, V.4
-
79
-
-
85006395736
-
Health benefits of fermented foods: Microbiota and beyond
-
E. J
-
Marco, M. L., Heeney, D. S., Binda, C. J., Cifelli, P. D., Cotter, B., Foligné, M., Gänzle, R., Kort, G., Pasin, A., Pihlanto, E. J. et al. 2017. Health benefits of fermented foods: Microbiota and beyond. Current Opinion in Biotechnology 44:94–102.
-
(2017)
Current Opinion in Biotechnology
, vol.44
, pp. 94-102
-
-
Marco, M.L.1
Binda, D.S.2
Cifelli, C.J.3
Cotter, P.D.4
Foligné, B.5
Gänzle, M.6
Kort, R.7
Pasin, G.8
Pihlanto, A.9
-
80
-
-
79951475133
-
A decade's perspective on DNA sequencing technology
-
Mardis, E. R. 2011. A decade's perspective on DNA sequencing technology. Nature 470 (7333):198.
-
(2011)
Nature
, vol.470
, Issue.7333
, pp. 198
-
-
Mardis, E.R.1
-
82
-
-
78651426431
-
Characterization of bacterial populations in Danish raw milk cheeses made with different starter cultures by denaturating gradient gel electrophoresis and pyrosequencing
-
Masoud, W., M., Takamiya, F. K., Vogensen, S., Lillevang, W. A., Al-Soud, S. J., Sørensen, and M., Jakobsen. 2011. Characterization of bacterial populations in Danish raw milk cheeses made with different starter cultures by denaturating gradient gel electrophoresis and pyrosequencing. The International Dairy Journal 21 (3):142–8.
-
(2011)
The International Dairy Journal
, vol.21
, Issue.3
, pp. 142-148
-
-
Masoud, W.1
Takamiya, M.2
Vogensen, F.K.3
Lillevang, S.4
Al-Soud, W.A.5
Sørensen, S.J.6
Jakobsen, M.7
-
83
-
-
84856227877
-
1H HRMAS-NMR metabolomic to assess quality and traceability of mozzarella cheese from Campania buffalo milk
-
Mazzei, P., and A., Piccolo. 2012. 1H HRMAS-NMR metabolomic to assess quality and traceability of mozzarella cheese from Campania buffalo milk. Food Chemistry 132 (3):1620–7.
-
(2012)
Food Chemistry
, vol.132
, Issue.3
, pp. 1620-1627
-
-
Mazzei, P.1
Piccolo, A.2
-
84
-
-
72849144434
-
Sequencing technologies–The next generation
-
Metzker, M. L. 2010. Sequencing technologies–The next generation. Nature Reviews. Genetics 11 (1):31–46.
-
(2010)
Nature Reviews. Genetics
, vol.11
, Issue.1
, pp. 31-46
-
-
Metzker, M.L.1
-
85
-
-
84966716401
-
Investigation of the activity of the microorganisms in a reblochon-style cheese by metatranscriptomic analysis
-
Monnet, C., E., Dugat-Bony, D., Swennen, J.-M., Beckerich, F., Irlinger, S., Fraud, and P., Bonnarme. 2016. Investigation of the activity of the microorganisms in a reblochon-style cheese by metatranscriptomic analysis. Frontiers in Microbiology 7:536.
-
(2016)
Frontiers in Microbiology
, vol.7
, pp. 536
-
-
Monnet, C.1
Dugat-Bony, E.2
Swennen, D.3
Beckerich, J.-M.4
Irlinger, F.5
Fraud, S.6
Bonnarme, P.7
-
86
-
-
52649167944
-
Extraction of RNA from cheese without prior separation of microbial cells
-
Monnet, C., V., Ulvé, A.-S., Sarthou, and F., Irlinger. 2008. Extraction of RNA from cheese without prior separation of microbial cells. Applied and Environmental Microbiology 74 (18):5724–30.
-
(2008)
Applied and Environmental Microbiology
, vol.74
, Issue.18
, pp. 5724-5730
-
-
Monnet, C.1
Ulvé, V.2
Sarthou, A.-S.3
Irlinger, F.4
-
87
-
-
67649286245
-
Assessment of the microbial diversity at the surface of livarot cheese using culture-dependent and independent approaches
-
Mounier, J., C., Monnet, N., Jacques, A., Antoinette, and F., Irlinger. 2009. Assessment of the microbial diversity at the surface of livarot cheese using culture-dependent and independent approaches. International Journal of Food Microbiology 133 (1-2):31–7.
-
(2009)
International Journal of Food Microbiology
, vol.133
, Issue.1-2
, pp. 31-37
-
-
Mounier, J.1
Monnet, C.2
Jacques, N.3
Antoinette, A.4
Irlinger, F.5
-
88
-
-
85024405108
-
1,003 Reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
-
Mukherjee, S., R., Seshadri, N. J., Varghese, E. A., Eloe-Fadrosh, J. P., Meier-Kolthoff, M., Göker, R. C., Coates, M., Hadjithomas, G. A., Pavlopoulos, D., Paez-Espino, et al. 2017. 1,003 Reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. Nature Biotechnology 35 (7):676.
-
(2017)
Nature Biotechnology
, vol.35
, Issue.7
, pp. 676
-
-
Mukherjee, S.1
Seshadri, R.2
Varghese, N.J.3
Eloe-Fadrosh, E.A.4
Meier-Kolthoff, J.P.5
Göker, M.6
Coates, R.C.7
Hadjithomas, M.8
Pavlopoulos, G.A.9
Paez-Espino, D.10
-
89
-
-
34547579868
-
Genotypic microbial community profiling: A critical technical review
-
Nocker, A., M., Burr, and A. K., Camper. 2007. Genotypic microbial community profiling: A critical technical review. Microbial Ecology 54 (2):276–89.
-
(2007)
Microbial Ecology
, vol.54
, Issue.2
, pp. 276-289
-
-
Nocker, A.1
Burr, M.2
Camper, A.K.3
-
90
-
-
4544285752
-
Milk proteomics
-
O’Donnell, R., J. W., Holland, H. C., Deeth, and P., Alewood. 2004. Milk proteomics. The International Dairy Journal 14 (12):1013–23.
-
(2004)
The International Dairy Journal
, vol.14
, Issue.12
, pp. 1013-1023
-
-
O’Donnell, R.1
Holland, J.W.2
Deeth, H.C.3
Alewood, P.4
-
91
-
-
84866368406
-
Metabolic fingerprinting of hard and semi-hard natural cheeses using gas chromatography with flame ionization detector for practical sensory prediction modeling
-
Ochi, H., T., Bamba, H., Naito, K., Iwatsuki, and E., Fukusaki. 2012. Metabolic fingerprinting of hard and semi-hard natural cheeses using gas chromatography with flame ionization detector for practical sensory prediction modeling. The Journal of Bioscience and Bioengineering 114 (5):506–11.
-
(2012)
The Journal of Bioscience and Bioengineering
, vol.114
, Issue.5
, pp. 506-511
-
-
Ochi, H.1
Bamba, T.2
Naito, H.3
Iwatsuki, K.4
Fukusaki, E.5
-
92
-
-
84860604220
-
Metabolomics-based component profiling of hard and semi-hard natural cheeses with gas chromatography/time-of-flight-mass spectrometry, and its application to sensory predictive modeling
-
Ochi, H., H., Naito, K., Iwatsuki, T., Bamba, and E., Fukusaki. 2012. Metabolomics-based component profiling of hard and semi-hard natural cheeses with gas chromatography/time-of-flight-mass spectrometry, and its application to sensory predictive modeling. The Journal of Bioscience and Bioengineering 113 (6):751–8.
-
(2012)
The Journal of Bioscience and Bioengineering
, vol.113
, Issue.6
, pp. 751-758
-
-
Ochi, H.1
Naito, H.2
Iwatsuki, K.3
Bamba, T.4
Fukusaki, E.5
-
93
-
-
84991728636
-
Functional genomics provides insights into the role of Propionibacterium freudenreichii ssp. shermanii JS in cheese ripening
-
Ojala, T., P. K. S., Laine, T., Ahlroos, J., Tanskanen, S., Pitkänen, T., Salusjärvi, M., Kankainen, S., Tynkkynen, L., Paulin, and P., Auvinen. 2017. Functional genomics provides insights into the role of Propionibacterium freudenreichii ssp. shermanii JS in cheese ripening. International Journal of Food Microbiology 241:39–48.
-
(2017)
International Journal of Food Microbiology
, vol.241
, pp. 39-48
-
-
Ojala, T.1
Laine, P.K.S.2
Ahlroos, T.3
Tanskanen, J.4
Pitkänen, S.5
Salusjärvi, T.6
Kankainen, M.7
Tynkkynen, S.8
Paulin, L.9
Auvinen, P.10
-
94
-
-
84937231032
-
Metabolomics and microbiological profile of Italian mozzarella cheese produced with buffalo and cow milk
-
Pisano, M. B., P., Scano, A., Murgia, S., Cosentino, and P., Caboni. 2016. Metabolomics and microbiological profile of Italian mozzarella cheese produced with buffalo and cow milk. Food Chemistry 192:618–24. doi: 10.1016/j.foodchem.2015.07.061.
-
(2016)
Food Chemistry
, vol.192
, pp. 618-624
-
-
Pisano, M.B.1
Scano, P.2
Murgia, A.3
Cosentino, S.4
Caboni, P.5
-
95
-
-
84958944593
-
Lactobacillus and leuconostoc volatilomes in cheese conditions
-
Pogačić, T., M.-B., Maillard, A., Leclerc, C., Hervé, V., Chuat, F., Valence, and A., Thierry. 2016. Lactobacillus and leuconostoc volatilomes in cheese conditions. Applied Microbiology and Biotechnology 100 (5):2335–46.
-
(2016)
Applied Microbiology and Biotechnology
, vol.100
, Issue.5
, pp. 2335-2346
-
-
Pogačić, T.1
Maillard, M.-B.2
Leclerc, A.3
Hervé, C.4
Chuat, V.5
Valence, F.6
Thierry, A.7
-
96
-
-
84906505468
-
A methodological approach to screen diverse cheese-related bacteria for their ability to produce aroma compounds
-
Pogačić, T., M.-B., Maillard, A., Leclerc, C., Hervé, V., Chuat, A. L., Yee, F., Valence, and A., Thierry. 2015. A methodological approach to screen diverse cheese-related bacteria for their ability to produce aroma compounds. Food Microbiology 46:145–53.
-
(2015)
Food Microbiology
, vol.46
, pp. 145-153
-
-
Pogačić, T.1
Maillard, M.-B.2
Leclerc, A.3
Hervé, C.4
Chuat, V.5
Yee, A.L.6
Valence, F.7
Thierry, A.8
-
97
-
-
0342744954
-
Selection and characterization of lactobacillus and bifidobacterium strains for use as probiotics
-
Prasad, J., H., Gill, J., Smart, and P. K., Gopal. 1998. Selection and characterization of lactobacillus and bifidobacterium strains for use as probiotics. The International Dairy Journal 8 (12):993–1002.
-
(1998)
The International Dairy Journal
, vol.8
, Issue.12
, pp. 993-1002
-
-
Prasad, J.1
Gill, H.2
Smart, J.3
Gopal, P.K.4
-
98
-
-
84876956956
-
Current metabolomics: Practical applications
-
Putri, S. P., Y., Nakayama, F., Matsuda, T., Uchikata, S., Kobayashi, A., Matsubara, and E., Fukusaki. 2013. Current metabolomics: Practical applications. Journal of Bioscience and Bioengineering 115 (6):579–89.
-
(2013)
Journal of Bioscience and Bioengineering
, vol.115
, Issue.6
, pp. 579-589
-
-
Putri, S.P.1
Nakayama, Y.2
Matsuda, F.3
Uchikata, T.4
Kobayashi, S.5
Matsubara, A.6
Fukusaki, E.7
-
99
-
-
80052281147
-
Molecular approaches to analyzing the microbial composition of raw milk and raw milk cheese
-
Quigley, L., O., O'Sullivan, T. P., Beresford, R. P., Ross, G. F., Fitzgerald, and P. D., Cotter. 2011. Molecular approaches to analyzing the microbial composition of raw milk and raw milk cheese. International Journal of Food Microbiology 150 (2–3):81–94.
-
(2011)
International Journal of Food Microbiology
, vol.150
, Issue.2-3
, pp. 81-94
-
-
Quigley, L.1
O'Sullivan, O.2
Beresford, T.P.3
Ross, R.P.4
Fitzgerald, G.F.5
Cotter, P.D.6
-
100
-
-
84866184346
-
High-throughput sequencing for detection of subpopulations of bacteria not previously associated with artisanal cheeses
-
Quigley, L., O., O'Sullivan, T. P., Beresford, R. P., Ross, G. F., Fitzgerald, and P. D., Cotter. 2012. High-throughput sequencing for detection of subpopulations of bacteria not previously associated with artisanal cheeses. Applied and Environmental Microbiology 78 (16):5717–23.
-
(2012)
Applied and Environmental Microbiology
, vol.78
, Issue.16
, pp. 5717-5723
-
-
Quigley, L.1
O'Sullivan, O.2
Beresford, T.P.3
Ross, R.P.4
Fitzgerald, G.F.5
Cotter, P.D.6
-
101
-
-
85029540840
-
Shotgun metagenomics, from sampling to analysis
-
Quince, C., A. W., Walker, J. T., Simpson, N. J., Loman, and N., Segata. 2017. Shotgun metagenomics, from sampling to analysis. Nature Biotechnology 35 (9):833.
-
(2017)
Nature Biotechnology
, vol.35
, Issue.9
, pp. 833
-
-
Quince, C.1
Walker, A.W.2
Simpson, J.T.3
Loman, N.J.4
Segata, N.5
-
102
-
-
49649089054
-
Molecular eco-systems biology: Towards an understanding of community function
-
Raes, J., and P., Bork. 2008. Molecular eco-systems biology: Towards an understanding of community function. Nature Reviews. Microbiology 6 (9):693
-
(2008)
Nature Reviews. Microbiology
, vol.6
, Issue.9
, pp. 693
-
-
Raes, J.1
Bork, P.2
-
103
-
-
84892057303
-
Molecular techniques to assess microbial community structure, function, and dynamics in the environment
-
Ahmad I., Ahmad F., Pichtel J., (eds), New York, NY: Springer, and,. ed
-
Rastogi, G., and R. K., Sani. 2011. Molecular techniques to assess microbial community structure, function, and dynamics in the environment. In Microbes and microbial technology, ed. I., Ahmad, F., Ahmad, and J., Pichtel, 29–57. New York, NY: Springer.
-
(2011)
Microbes and microbial technology
, pp. 29-57
-
-
Rastogi, G.1
Sani, R.K.2
-
104
-
-
84907965038
-
Characterization of the bacterial biodiversity in pico cheese (an artisanal Azorean food))
-
Riquelme, C., S., Câmara, M. D L N., Enes Dapkevicius, P., Vinuesa, C. C. G., da Silva, F. X., Malcata, and O. A., Rego. 2015. Characterization of the bacterial biodiversity in pico cheese (an artisanal Azorean food)). International Journal of Food Microbiology 192:86–94.
-
(2015)
International Journal of Food Microbiology
, vol.192
, pp. 86-94
-
-
Riquelme, C.1
Câmara, S.2
Enes Dapkevicius, M.D.L.N.3
Vinuesa, P.4
da Silva, C.C.G.5
Malcata, F.X.6
Rego, O.A.7
-
105
-
-
47549091714
-
Pre-genomic, genomic and post-genomic study of microbial communities involved in bioenergy
-
Rittmann, B. E., R., Krajmalnik-Brown, and R. U., Halden. 2008. Pre-genomic, genomic and post-genomic study of microbial communities involved in bioenergy. Nature Reviews. Microbiology 6 (8):604.
-
(2008)
Nature Reviews. Microbiology
, vol.6
, Issue.8
, pp. 604
-
-
Rittmann, B.E.1
Krajmalnik-Brown, R.2
Halden, R.U.3
-
106
-
-
22944487956
-
Antibacterial activities of peptides from the water-soluble extracts of Italian cheese varieties
-
Rizzello, C., I., Losito, M., Gobbetti, T., Carbonara, M., De Bari, and P., Zambonin. 2005. Antibacterial activities of peptides from the water-soluble extracts of Italian cheese varieties. Journal of Dairy Science 88 (7):2348–60.
-
(2005)
Journal of Dairy Science
, vol.88
, Issue.7
, pp. 2348-2360
-
-
Rizzello, C.1
Losito, I.2
Gobbetti, M.3
Carbonara, T.4
De Bari, M.5
Zambonin, P.6
-
107
-
-
84937735251
-
Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed
-
Rocca, J. D., E. K., Hall, J. T., Lennon, S. E., Evans, M. P., Waldrop, J. B., Cotner, D. R., Nemergut, E. B., Graham, and M. D., Wallenstein. 2015. Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed. The Isme Journal 9 (8):1693.
-
(2015)
The Isme Journal
, vol.9
, Issue.8
, pp. 1693
-
-
Rocca, J.D.1
Hall, E.K.2
Lennon, J.T.3
Evans, S.E.4
Waldrop, M.P.5
Cotner, J.B.6
Nemergut, D.R.7
Graham, E.B.8
Wallenstein, M.D.9
-
108
-
-
85012859675
-
Metabolomics–the combination of analytical biochemistry, biology, and informatics
-
Moo-Young M., (ed), 2nd ed., Cambridge, MA: Academic Press, and,. ed
-
Roessner, U., A., Nahid, B., Chapman, A., Hunter, and M., Bellgard. 2011. Metabolomics–the combination of analytical biochemistry, biology, and informatics. In Comprehensive biotechnology, ed. M., Moo-Young, 447–459. 2nd ed. Cambridge, MA: Academic Press.
-
(2011)
Comprehensive biotechnology
, pp. 447-459
-
-
Roessner, U.1
Nahid, A.2
Chapman, B.3
Hunter, A.4
Bellgard, M.5
-
109
-
-
84863819137
-
Farm animal milk proteomics
-
Roncada, P., C., Piras, A., Soggiu, R., Turk, A., Urbani, and L., Bonizzi. 2012. Farm animal milk proteomics. Journal of Proteome Research 75 (14):4259–74.
-
(2012)
Journal of Proteome Research
, vol.75
, Issue.14
, pp. 4259-4274
-
-
Roncada, P.1
Piras, C.2
Soggiu, A.3
Turk, R.4
Urbani, A.5
Bonizzi, L.6
-
110
-
-
84953724558
-
Microbial dynamics during shelf-life of industrial ricotta cheese and identification of a bacillus strain as a cause of a pink discolouration
-
Sattin, E., N., Andreani, L., Carraro, L., Fasolato, S., Balzan, E., Novelli, A., Squartini, A., Telatin, B., Simionati, and B., Cardazzo. 2016. Microbial dynamics during shelf-life of industrial ricotta cheese and identification of a bacillus strain as a cause of a pink discolouration. Food Microbiology 57:8–15.
-
(2016)
Food Microbiology
, vol.57
, pp. 8-15
-
-
Sattin, E.1
Andreani, N.2
Carraro, L.3
Fasolato, L.4
Balzan, S.5
Novelli, E.6
Squartini, A.7
Telatin, A.8
Simionati, B.9
Cardazzo, B.10
-
111
-
-
84920644670
-
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
-
Salter, S. J., M. J., Cox, E. M., Turek, S. T., Calus, W. O., Cookson, M. F., Moffatt, P., Turner, J., Parkhill, N. J., Loman, and A. W., Walker. 2014. Reagent and laboratory contamination can critically impact sequence-based microbiome analyses. BMC Biology 12 (1):87.
-
(2014)
BMC Biology
, vol.12
, Issue.1
, pp. 87
-
-
Salter, S.J.1
Cox, M.J.2
Turek, E.M.3
Calus, S.T.4
Cookson, W.O.5
Moffatt, M.F.6
Turner, P.7
Parkhill, J.8
Loman, N.J.9
Walker, A.W.10
-
112
-
-
85044546780
-
Invited review: Bioactive compounds produced during cheese ripening and health effects associated with aged cheese consumption
-
Santiago-López, L., J. E., Aguilar-Toalá, A., Hernández-Mendoza, B., Vallejo-Cordoba, A. M., Liceaga, and A. F., González-Córdova. 2018. Invited review: Bioactive compounds produced during cheese ripening and health effects associated with aged cheese consumption. Journal of Dairy Science 101 (5):3742–57.
-
(2018)
Journal of Dairy Science
, vol.101
, Issue.5
, pp. 3742-3757
-
-
Santiago-López, L.1
Aguilar-Toalá, J.E.2
Hernández-Mendoza, A.3
Vallejo-Cordoba, B.4
Liceaga, A.M.5
González-Córdova, A.F.6
-
113
-
-
84899849757
-
Cultivation-independent analysis of microbial communities on Austrian raw milk hard cheese rinds
-
Schornsteiner, E., E., Mann, O., Bereuter, M., Wagner, and S., Schmitz-Esser. 2014. Cultivation-independent analysis of microbial communities on Austrian raw milk hard cheese rinds. International Journal of Food Microbiology 180:88–97.
-
(2014)
International Journal of Food Microbiology
, vol.180
, pp. 88-97
-
-
Schornsteiner, E.1
Mann, E.2
Bereuter, O.3
Wagner, M.4
Schmitz-Esser, S.5
-
114
-
-
77954083280
-
Non-starter lactic acid bacteria used to improve cheese quality and provide health benefits
-
Settanni, L., and G., Moschetti. 2010. Non-starter lactic acid bacteria used to improve cheese quality and provide health benefits. Food Microbiology 27 (6):691–7.
-
(2010)
Food Microbiology
, vol.27
, Issue.6
, pp. 691-697
-
-
Settanni, L.1
Moschetti, G.2
-
115
-
-
84879296060
-
Nonstarter lactic acid bacteria volatilomes produced using cheese components
-
Sgarbi, E., C., Lazzi, G., Tabanelli, M., Gatti, E., Neviani, and F., Gardini. 2013. Nonstarter lactic acid bacteria volatilomes produced using cheese components. Journal of Dairy Science 96 (7):4223–34.
-
(2013)
Journal of Dairy Science
, vol.96
, Issue.7
, pp. 4223-4234
-
-
Sgarbi, E.1
Lazzi, C.2
Tabanelli, G.3
Gatti, M.4
Neviani, E.5
Gardini, F.6
-
116
-
-
84982113165
-
Proteomic and peptidomic profiling of Brazilian artisanal 'Coalho' cheese
-
Silva, R. A., V. S., Bezerra, M. D C B., Pimentel, A. L. F., Porto, M. T. H., Cavalcanti, and L., José Luiz Filho. 2016. Proteomic and peptidomic profiling of Brazilian artisanal 'Coalho' cheese. Journal of the Science of Food and Agriculture 96 (13):4337–44.
-
(2016)
Journal of the Science of Food and Agriculture
, vol.96
, Issue.13
, pp. 4337-4344
-
-
Silva, R.A.1
Bezerra, V.S.2
Pimentel, M.D.C.B.3
Porto, A.L.F.4
Cavalcanti, M.T.H.5
José Luiz Filho, L.6
-
117
-
-
84963594071
-
Unravelling the effect of clostridia spores and lysozyme on microbiota dynamics in grana padano cheese: A metaproteomics approach
-
Soggiu, A., C., Piras, S. L., Mortera, I., Alloggio, A., Urbani, L., Bonizzi, and P., Roncada. 2016. Unravelling the effect of clostridia spores and lysozyme on microbiota dynamics in grana padano cheese: A metaproteomics approach. Journal of Proteome Research 147:21–7.
-
(2016)
Journal of Proteome Research
, vol.147
, pp. 21-27
-
-
Soggiu, A.1
Piras, C.2
Mortera, S.L.3
Alloggio, I.4
Urbani, A.5
Bonizzi, L.6
Roncada, P.7
-
118
-
-
84930154933
-
Comprehensive and quantitative profiling of lipid species in human milk, cow milk and a phospholipid-enriched milk formula by GC and MS/MSALL
-
Sokol, E., T., Ulven, N. J., Faergeman, and C. S., Ejsing. 2015. Comprehensive and quantitative profiling of lipid species in human milk, cow milk and a phospholipid-enriched milk formula by GC and MS/MSALL. European Journal of Lipid Science and Technology: Ejlst 117 (6):751–9.
-
(2015)
European Journal of Lipid Science and Technology: Ejlst
, vol.117
, Issue.6
, pp. 751-759
-
-
Sokol, E.1
Ulven, T.2
Faergeman, N.J.3
Ejsing, C.S.4
-
119
-
-
84873743076
-
Next-generation sequencing and its potential impact on food microbial genomics
-
Solieri, L., T. C., Dakal, and P., Giudici. 2013. Next-generation sequencing and its potential impact on food microbial genomics. Annals of Microbiology 63 (1):21–37.
-
(2013)
Annals of Microbiology
, vol.63
, Issue.1
, pp. 21-37
-
-
Solieri, L.1
Dakal, T.C.2
Giudici, P.3
-
120
-
-
59449097019
-
Clinical applications of metabolomics in oncology: a review
-
Spratlin, J. L., N. J., Serkova, and S. G., Eckhardt. 2009. Clinical applications of metabolomics in oncology: a review. Clinical Cancer Research: An Official Journal of the American Association for Cancer Research 15 (2):431–40.
-
(2009)
Clinical Cancer Research: An Official Journal of the American Association for Cancer Research
, vol.15
, Issue.2
, pp. 431-440
-
-
Spratlin, J.L.1
Serkova, N.J.2
Eckhardt, S.G.3
-
121
-
-
0033993858
-
Consumption of fermented and nonfermented dairy products: Effects on cholesterol concentrations and metabolism
-
St-Onge, M.-P., E. R., Farnworth, and P. J., Jones. 2000. Consumption of fermented and nonfermented dairy products: Effects on cholesterol concentrations and metabolism. The American Journal of Clinical Nutrition 71 (3):674–81.
-
(2000)
The American Journal of Clinical Nutrition
, vol.71
, Issue.3
, pp. 674-681
-
-
St-Onge, M.-P.1
Farnworth, E.R.2
Jones, P.J.3
-
122
-
-
0345270397
-
Plant metabolomics: Large-scale phytochemistry in the functional genomics era
-
Sumner, L. W., P., Mendes, and R. A., Dixon. 2003. Plant metabolomics: Large-scale phytochemistry in the functional genomics era. Phytochemistry 62 (6):817–36.
-
(2003)
Phytochemistry
, vol.62
, Issue.6
, pp. 817-836
-
-
Sumner, L.W.1
Mendes, P.2
Dixon, R.A.3
-
123
-
-
84942895870
-
Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera
-
Sun, Z., H. M. B., Harris, A., McCann, C., Guo, S., Argimón, W., Zhang, X., Yang, I. B., Jeffery, J. C., Cooney, T. F., Kagawa, et al. 2015. Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera. Nature Communications 6 (1):8322.
-
(2015)
Nature Communications
, vol.6
, Issue.1
, pp. 8322
-
-
Sun, Z.1
Harris, H.M.B.2
McCann, A.3
Guo, C.4
Argimón, S.5
Zhang, W.6
Yang, X.7
Jeffery, I.B.8
Cooney, J.C.9
Kagawa, T.F.10
-
124
-
-
79551491386
-
Assessment of the diversity of dairy Lactococcus lactis subsp. lactis isolates by an integrated approach combining phenotypic, genomic, and transcriptomic analyses
-
Tan-A-Ram, P., T., Cardoso, M.-L., Daveran-Mingot, S., Kanchanatawee, P., Loubière, L., Girbal, and M., Cocaign-Bousquet. 2011. Assessment of the diversity of dairy Lactococcus lactis subsp. lactis isolates by an integrated approach combining phenotypic, genomic, and transcriptomic analyses. Applied and Environmental Microbiology 77 (3):739–48.
-
(2011)
Applied and Environmental Microbiology
, vol.77
, Issue.3
, pp. 739-748
-
-
Tan-A-Ram, P.1
Cardoso, T.2
Daveran-Mingot, M.-L.3
Kanchanatawee, S.4
Loubière, P.5
Girbal, L.6
Cocaign-Bousquet, M.7
-
125
-
-
79954508234
-
Comparative transcriptome analysis of Lactococcus lactis subsp. cremoris strains under conditions simulating cheddar cheese manufacture
-
Taïbi, A., N., Dabour, M., Lamoureux, D., Roy, and G., LaPointe. 2011. Comparative transcriptome analysis of Lactococcus lactis subsp. cremoris strains under conditions simulating cheddar cheese manufacture. International Journal of Food Microbiology 146 (3):263–75.
-
(2011)
International Journal of Food Microbiology
, vol.146
, Issue.3
, pp. 263-275
-
-
Taïbi, A.1
Dabour, N.2
Lamoureux, M.3
Roy, D.4
LaPointe, G.5
-
126
-
-
84877277664
-
In vivo dental plaque pH after consumption of dairy products
-
Telgi, R. L., V., Yadav, C. R., Telgi, and N., Boppana. 2013. In vivo dental plaque pH after consumption of dairy products. General Dentistry 61 (3):56–9.
-
(2013)
General Dentistry
, vol.61
, Issue.3
, pp. 56-59
-
-
Telgi, R.L.1
Yadav, V.2
Telgi, C.R.3
Boppana, N.4
-
127
-
-
85026644382
-
Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing
-
Tessler, M., J. S., Neumann, E., Afshinnekoo, M., Pineda, R., Hersch, L. F. M., Velho, B. T., Segovia, F. A., Lansac-Toha, M., Lemke, R., DeSalle, et al. 2017. Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing. Scientific Reports 7 (1):6589.
-
(2017)
Scientific Reports
, vol.7
, Issue.1
, pp. 6589
-
-
Tessler, M.1
Neumann, J.S.2
Afshinnekoo, E.3
Pineda, M.4
Hersch, R.5
Velho, L.F.M.6
Segovia, B.T.7
Lansac-Toha, F.A.8
Lemke, M.9
DeSalle, R.10
-
128
-
-
85028165246
-
Ten years of next-generation sequencing technology
-
van Dijk, E. L., H., Auger, Y., Jaszczyszyn, and C., Thermes. 2014. Ten years of next-generation sequencing technology. Trends in Genetics 30 (9):418–26.
-
(2014)
Trends in Genetics
, vol.30
, Issue.9
, pp. 418-426
-
-
van Dijk, E.L.1
Auger, H.2
Jaszczyszyn, Y.3
Thermes, C.4
-
129
-
-
85014200571
-
Translating omics to food microbiology
-
Walsh, A. M., F., Crispie, M. J., Claesson, and P. D., Cotter. 2017. Translating omics to food microbiology. Annual Review of Food Science and Technology 8:113–34.
-
(2017)
Annual Review of Food Science and Technology
, vol.8
, pp. 113-134
-
-
Walsh, A.M.1
Crispie, F.2
Claesson, M.J.3
Cotter, P.D.4
-
130
-
-
57049104653
-
Cheese in nutrition and health
-
Walther, B., A., Schmid, R., Sieber, and K., Wehrmüller. 2008. Cheese in nutrition and health. Dairy Science and Technology 88 (4–5):389–405.
-
(2008)
Dairy Science and Technology
, vol.88
, Issue.4-5
, pp. 389-405
-
-
Walther, B.1
Schmid, A.2
Sieber, R.3
Wehrmüller, K.4
-
131
-
-
34247854960
-
Complete genome sequence of the prototype lactic acid bacterium Lactococcus lactis subsp. cremoris MG1363
-
Wegmann, U., M., O'Connell-Motherway, A., Zomer, G., Buist, C., Shearman, C., Canchaya, M., Ventura, A., Goesmann, M. J., Gasson, O. P., Kuipers, et al. 2007. Complete genome sequence of the prototype lactic acid bacterium Lactococcus lactis subsp. cremoris MG1363. Journal of Bacteriology 189 (8):3256–70.
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.8
, pp. 3256-3270
-
-
Wegmann, U.1
O'Connell-Motherway, M.2
Zomer, A.3
Buist, G.4
Shearman, C.5
Canchaya, C.6
Ventura, M.7
Goesmann, A.8
Gasson, M.J.9
Kuipers, O.P.10
-
132
-
-
4344646435
-
The application of two‐dimensional polyacrylamide gel electrophoresis and downstream analyses to a mixed community of prokaryotic microorganisms
-
Wilmes, P., and P. L., Bond. 2004. The application of two‐dimensional polyacrylamide gel electrophoresis and downstream analyses to a mixed community of prokaryotic microorganisms. Environmental Microbiology 6 (9):911–20.
-
(2004)
Environmental Microbiology
, vol.6
, Issue.9
, pp. 911-920
-
-
Wilmes, P.1
Bond, P.L.2
-
133
-
-
84904578387
-
Cheese rind communities provide tractable systems for in situ and in vitro studies of microbial diversity
-
Wolfe, B. E., J. E., Button, M., Santarelli, and R. J., Dutton. 2014. Cheese rind communities provide tractable systems for in situ and in vitro studies of microbial diversity. Cell 158 (2):422–33.
-
(2014)
Cell
, vol.158
, Issue.2
, pp. 422-433
-
-
Wolfe, B.E.1
Button, J.E.2
Santarelli, M.3
Dutton, R.J.4
-
134
-
-
84978194105
-
Proteome analysis of Lactobacillus plantarum strain under cheese-like conditions
-
Wu, Z., P., Wang, J., He, D., Pan, X., Zeng, and J., Cao. 2016. Proteome analysis of Lactobacillus plantarum strain under cheese-like conditions. Journal of Proteomics 146:165–71.
-
(2016)
Journal of Proteomics
, vol.146
, pp. 165-171
-
-
Wu, Z.1
Wang, P.2
He, J.3
Pan, D.4
Zeng, X.5
Cao, J.6
-
135
-
-
84907504271
-
Great interspecies and intraspecies diversity of dairy propionibacteria in the production of cheese aroma compounds
-
Yee, A. L., M.-B., Maillard, N., Roland, V., Chuat, A., Leclerc, T., Pogačić, F., Valence, and A., Thierry. 2014. Great interspecies and intraspecies diversity of dairy propionibacteria in the production of cheese aroma compounds. International Journal of Food Microbiology 191:60–8.
-
(2014)
International Journal of Food Microbiology
, vol.191
, pp. 60-68
-
-
Yee, A.L.1
Maillard, M.-B.2
Roland, N.3
Chuat, V.4
Leclerc, A.5
Pogačić, T.6
Valence, F.7
Thierry, A.8
-
136
-
-
79952040737
-
The initial efficiency of the proteolytic system of Lactococcus lactis strains determines their responses to a cheese environment
-
Yvon, M., C., Gitton, E., Chambellon, G., Bergot, and V., Monnet. 2011. The initial efficiency of the proteolytic system of Lactococcus lactis strains determines their responses to a cheese environment. The International Dairy Journal 21 (5):335–45.
-
(2011)
The International Dairy Journal
, vol.21
, Issue.5
, pp. 335-345
-
-
Yvon, M.1
Gitton, C.2
Chambellon, E.3
Bergot, G.4
Monnet, V.5
-
137
-
-
85021403629
-
Combination of metabolomic and proteomic analysis revealed different features among Lactobacillus delbrueckii subspecies bulgaricus and lactis strains while in vivo testing in the model organism caenorhabditis elegans highlighted probiotic properties
-
Zanni, E., E., Schifano, S., Motta, F., Sciubba, C., Palleschi, P., Mauri, G., Perozzi, D., Uccelletti, C., Devirgiliis, and A., Miccheli. 2017. Combination of metabolomic and proteomic analysis revealed different features among Lactobacillus delbrueckii subspecies bulgaricus and lactis strains while in vivo testing in the model organism caenorhabditis elegans highlighted probiotic properties. Frontiers in Microbiology 8:1206.
-
(2017)
Frontiers in Microbiology
, vol.8
, pp. 1206
-
-
Zanni, E.1
Schifano, E.2
Motta, S.3
Sciubba, F.4
Palleschi, C.5
Mauri, P.6
Perozzi, G.7
Uccelletti, D.8
Devirgiliis, C.9
Miccheli, A.10
-
138
-
-
84876148755
-
Protein analysis by shotgun/bottom-up proteomics
-
and
-
Zhang, Y., B. R., Fonslow, B., Shan, M.-C., Baek, and J. R., Yates. III. 2013. Protein analysis by shotgun/bottom-up proteomics. Chemical Reviews 113 (4):2343–94.
-
(2013)
Chemical Reviews
, vol.113
, Issue.4
, pp. 2343-2394
-
-
Zhang, Y.1
Fonslow, B.R.2
Shan, B.3
Baek, M.-C.4
Yates, J.R.5
-
139
-
-
33846916395
-
Time-resolved determination of the CcpA regulon of Lactococcus lactis subsp. cremoris MG1363
-
Zomer, A. L., G., Buist, R., Larsen, J., Kok, and O. P., Kuipers. 2007. Time-resolved determination of the CcpA regulon of Lactococcus lactis subsp. cremoris MG1363. Journal of Bacteriology 189 (4):1366–81.
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.4
, pp. 1366-1381
-
-
Zomer, A.L.1
Buist, G.2
Larsen, R.3
Kok, J.4
Kuipers, O.P.5
|