New insights in antibiotic resistance of Lactobacillus species from fermented foods

Food Research International

Volumn 78, Issue , 2015, Pages 465-481

  Abriouel, Hikmate ^a   Casado Muñoz, María del Carmen ^a   Lavilla Lerma, Leyre ^a   Pérez Montoro, Beatriz ^a   Bockelmann, Wilhelm ^b   Pichner, Rohtraud ^c   Kabisch, Jan ^b   Cho, Gyu Sung ^b   Franz, Charles M A P ^b   Gálvez, Antonio ^a   Benomar, Nabil ^a  

^a UNIVERSITY OF JAÉN   (Spain)

^b FEDERAL RESEARCH INSTITUTE OF NUTRITION AND FOOD   (Germany)

^c UNIVERSITY OF APPLIED SCIENCES   (Germany)

Author keywords

Fermented foods; Horizontal gene transfer; In silico analysis; Lactobacillus spp.; Phenotypic and genotypic antibiotic resistance

Indexed keywords

ANTIBIOTICS; GENE TRANSFER; GENES; MOLECULAR BIOLOGY; PEPTIDES;

ANTIBIOTIC RESISTANCE; FERMENTED FOODS; HORIZONTAL GENE TRANSFER; IN-SILICO; LACTOBACILLUS SPP;

BACTERIA;

EID: 84949314542     PISSN: 09639969     EISSN: 18737145     Source Type: Journal    
DOI: 10.1016/j.foodres.2015.09.016     Document Type: Review

References (204)

1. Abriouel H., Ben Omar N., Lucas López R., Martínez-Cañaamero M., Keleke S., Gálvez A. Culture-independent analysis of the microbial composition of the African traditional fermented foods poto poto and degue by using three different DNA extraction methods. International Journal of Food Microbiology 2006, 111:228-233.
2. Abriouel H., Martín-Platero A., Maqueda M., Valdivia E., Martínez-Bueno M. Biodiversity of the microbial community in a Spanish farmhouse cheese as revealed by culture-dependent and culture-independent methods. International Journal of Food Microbiology 2008, 127:200-208.
3. Abriouel H., Benomar N., Lucas R., Gálvez A. Culture-independent study of the diversity of microbial populations in brines during fermentation of naturally fermented Aloreña green table olives. International Journal of Food Microbiology 2011, 144:487-496.
4. Abriouel H., Benomar N., Cobo A., Caballero N., Fernández Fuentes M.Á., Pérez-Pulido R., et al. Characterization of lactic acid bacteria from naturally-fermented Manzanilla Aloreña green table olives. Food Microbiology 2012, 32:308-316.
5. Adimpong D.B., Nielsen D.S., Sørensen K.I., Vogensen F.K., Sawadogo-Lingani H., Derkx P.M.F., et al. Lactobacillus delbrueckii subsp. jakobsenii subsp. nov., isolated from dolo wort; an alcoholic fermented beverage in Burkina Faso. International Journal of Systematic and Evolutionary Microbiology 2013, 63:3720-3726.
6. Ai L., Chen C., Zhou F., Wang L., Zhang H., Chen W., et al. Complete genome sequence of the probiotic strain Lactobacillus casei BD-II. Journal of Bacteriology 2011, 193:3160-3161.
7. Ali A.A., Mustafa M.M. Use of starter cultures of lactic acid bacteria and yeasts in the preparation of kisra, a Sudanese fermented food. Pakistan Journal of Nutrition 2009, 8:1349-1353.
8. Al-Nabulsi A.A., Osaili T.M., Elabedeen N.A., Jaradat Z.W., Shaker R.R., Kheirallah K.A., et al. Impact of environmental stress desiccation, acidity, alkalinity, heat or cold on antibiotic susceptibility of Cronobacter sakazakii. International Journal of Food Microbiology 2011, 146:137-143.
9. Ammor M.S., Flórez A.B., Mayo B. Antibiotic resistance in nonenterococcal lactic acid bacteria and bifidobacteria. Food Microbiology 2007, 24:559-570.
10. Ammor M.S., Florez A.B., van Hoek A.H., de Los Reyes-Gavilan C.G., Aarts H.J., Margolles A., et al. Molecular characterization of intrinsic and acquired antibiotic resistance in lactic acid bacteria and bifidobacteria. Journal of Molecular Microbiology and Biotechnology 2008, 14:6-15.
11. Auputinan P., Tragoolpua Y., Pruksakorn S., Thongwai N. Profiles of plasmids in lactobacilli isolated from fermented foods. Chiang Mai Journal of Science 2011, 38:648-652.
12. Axelsson L., Rud I., Naterstad K., Blom H., Renckens B., Boekhorst J., et al. Genome sequence of the naturally plasmid-free Lactobacillus plantarum strain NC8 (CCUG 61730). Journal of Bacteriology 2012, 194:2391-2392.
13. Aymerich T., Martín B., Garriga M., Vidal-Carou M.C., Bover-Cid S., Hugas M. Safety properties and molecular strain typing of lactic acid bacteria from slightly fermented sausages. Journal of Applied Microbiology 2006, 100:40-49.
14. Barbosa T.M., Levy S.B. The impact of antibiotic use on resistance development and persistence. Drug Resistance Updates 2000, 3:303-311.
15. Båth K., Roos S., Wall T., Jonsson H. The cell surface of Lactobacillus reuteri ATCC 55730 highlighted by identification of 126 extracellular proteins from the genome sequence. FEMS Microbiology Letters 2005, 253:75-82.
16. Belletti N., Monica G., Benedetta B., Erasmo N., Giulia T., Fausto G. Antibiotic resistance of lactobacilli isolated from two Italian hard cheeses. Journal of Food Protection 2009, 72:2162-2169.
17. Ben Omar N., Ampe F., Raimbault M., Guyot J.-P., Tailliez P. Molecular diversity of lactic acid bacteria from cassava sour starch (Colombia). Systematic and Applied Microbiology 2000, 23:285-291.
18. Bennedsen M., Stuer-Lauridsen B., Danielsen M., Johansen E. Screening for antimicrobial resistance genes and virulence factors via genome sequencing. Applied and Environmental Microbiology 2011, 77:2785-2787.
19. Bennett D.M., Shekhel T., Radelet M., Miller M.D. Isolated Lactobacillus chronic prosthetic knee infection. Orthopedics 2014, 37:83-86.
20. Bergsveinson J., Baecker N., Pittet V., Ziola B. Role of plasmids in Lactobacillus brevis BSO 464 hop tolerance and beer spoilage. Applied and Environmental Microbiology 2015, 81:1234-1241.
21. Bernardeau M., Vernoux J.P., Henri-Dubernet S., Gueguen M. Safety assessment of dairy microorganisms: The Lactobacillus genus. International Journal of Food Microbiology 2008, 126:278-285.
22. Blandino G., Milazzo I., Fazio D. Antibiotic susceptibility of bacterial isolates from probiotic products available in Italy. Microbial Ecology in Health and Disease 2008, 20:199-203.
23. Broadbent J.R., Neeno-Eckwall E., Stahl B., Tandee K., Cai H., Morovic W., et al. Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation. BMC Genomics 2012, 13:533.
24. Broadbent J.R., Hughes J.E., Welker D.L., Tompkins T.A., Steele J.L. Complete genome sequence for Lactobacillus helveticus CNRZ 32, an industrial cheese starter and cheese flavor adjunct. Genome Announcements 2013, 1:e00590-13. 10.1128/genomeA.00590-13.
25. Cadena M.P., Villarraga E.C., Luján D.E., Salcedo J.G. Evaluación de la agroindustria del almidón agrio de yuca (Manihot esculenta Crantz) en Córdoba y Sucre. Temas Agrarios 2006, 11:43-53.
26. Cai H., Thompson R., Budinich M.F., Broadbent J.R., Steele J.L. Genome sequence and comparative genome analysis of Lactobacillus casei: Insights into their niche-associated evolution. Genome Biology and Evolution 2009, 1:239-257.
27. Callanan M., Kaleta P., O'Callaghan J., O'Sullivan O., Jordan K., McAuliffe O., et al. Genome sequence of Lactobacillus helveticus, an organism distinguished by selective gene loss and insertion sequence element expansion. Journal of Bacteriology 2008, 190:727-735.
28. Canchaya C., Claesson M.J., Fitzgerald G.F., van Sinderen D., O'Toole P.W. Diversity of the genus Lactobacillus revealed by comparative genomics of five species. Microbiology 2006, 152:3185-3196.
29. Cannon J.P., Lee T.A., Bolanos J.T., Danziger L.H. Pathogenic relevance of Lactobacillus: A retrospective review of over 200 cases. European Journal of Clinical Microbiology & Infectious Diseases 2005, 24:31-40.
30. Čanžek Majhenič A., Mohar Lorbeg P., Rogelj I. Characterization of the Lactobacillus community in traditional Karst ewe's cheese. International Journal of Dairy Technology 2007, 60:182-190.
31. Casado Muñoz M.C., Benomar N., Lavilla Lerma L., Gálvez A., Abriouel H. Antibiotic resistance of Lactobacillus pentosus and Leuconostoc pseudomesenteroides isolated from naturally-fermented Aloreña table olives throughout fermentation process. International Journal of Food Microbiology 2014, 172:110-118.
32. Casas I.A., Dobrogosz W.J. Lactobacillus reuteri: An overview of a new probiotic for humans and animals. Microecology and Therapy 1997, 25:221-231.
33. Casas I.A., Dobrogosz W.J. Validation of the probiotic concept: Lactobacillus reuteri confers broad-spectrum protection against disease in humans and animals. Microbial Ecology in Health and Disease 2000, 12:247-285.
34. Cataloluk O., Gogebakan B. Presence of drug resistance in intestinal lactobacilli of dairy and human origin in Turkey. FEMS Microbiology Letters 2004, 236:7-12.
35. Chaillou S., Champomier-Vergès M.C., Cornet M., Crutz-Le Coq A.M., Dudez A.M., Martin V., et al. The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K. Nature Biotechnology 2005, 23:1527-1533.
36. Charteris W.P., Kelly P.M., Morelli L., Collins J.K. Development and application of an in vitro methodology to determine the transit tolerance of potentially probiotic Lactobacillus and Bifidobacterium species in the upper human gastrointestinal tract. Journal of Applied Microbiology 1998, 84:759-768.
37. Charteris W.P., Kelly P.M., Morelli L., Collins J.K. Gradient diffusion antibiotic susceptibility testing of potentially probiotic lactobacilli. Journal of Food Protection 2001, 64:2007-2014.
38. Chen C., Ai L.Z., Zhou F.F., Wang L., Zhang H., Chen W., et al. Complete genome sequence of the probiotic bacterium Lactobacillus casei LC2W. Journal of Bacteriology 2011, 193:3419-3420.
39. Claesson M.J., van Sinderen D., O'Toole P.W. Lactobacillus phylogenomics-towards a reclassification of the genus. International Journal of Systematic and Evolutionary Microbiology 2008, 58:2945-2954.
40. Clewell D.B., Flannagan S.E., Jaworski D.D. Unconstrained bacterial promiscuity: The Tn916-Tn1545 family of conjugative transposons. Trends in Microbiology 1995, 3:229-236.
41. Coast J., Smith R.D. Antimicrobial resistance: Cost and containment. Expert Review of Anti-Infective Therapy 2003, 1:241-251.
42. Comunian R., Daga E., Dupré I., Paba A., Devirgiliis C., Piccioni V., et al. Susceptibility to tetracycline and erythromycin of Lactobacillus paracasei strains isolated from traditional Italian fermented foods. International Journal of Food Microbiology 2010, 138:151-156.
43. Condon S. Aerobic metabolism of lactic acid bacteria. Irish Journal of Food Science and Technology 1983, 7:15-25.
44. Coppola R., Succi M., Tremonte P., Reale A., Salzano G., Sorrentino E. Antibiotic suscebtibility of Lactobacillus rhamnosus strains isolated from Parmigiano Reggiano cheese. Le Lait 2005, 85:193-204.
45. Cremonesi P., Chessa S., Castiglioni B. Genome sequence and analysis of Lactobacillus helveticus. Frontiers in Microbiology 2013, 3:1-12.
46. Crowley S., Bottacini F., Mahony J., van Sinderen D. Complete genome sequence of Lactobacillus plantarum strain 16, a broad-spectrum antifungal-producing lactic acid bacterium. Genome Announcements 2013, 1:e00533-13. 10.1128/genomeA.00533-13.
47. Danielsen M. Characterization of the tetracycline resistance plasmid pMD5057 from Lactobacillus plantarum 5057 reveals a composite structure. Plasmid 2002, 48:98-103.
48. Danielsen M., Wind A. Susceptibility of Lactobacillus spp. to antimicrobial agents. International Journal of Food Microbiology 2003, 82:1-11.
49. Danielsen M., Madsen H.L., Hammer K., Wind A. Investigation of Danish and Italian cheeses made from raw milk and pasteurized milk for the presence of antibiotic resistant lactic acid bacteria and the genetic characterisation of these bacteria. Poster Lab8 conference: Symposium on lactic acid bacteria: Genetics, metabolism and applications, Egmond aan Zee 2005.
50. Davidson B.E., Kordias N., Dobos M., Hillier A.J. Genomic organization of lactic acid bacteria. Antonie Van Leeuwenhoek 1996, 70:161-183.
51. DeLisle S., Perl T.M. Vancomycin-resistant enterococci. Chest 2003, 123(Suppl.):504S-518S.
52. Dessalegn A., Ashenafi M. Evaluation of the probiotic properties and antibiotic resistance of lactic acid bacteria isolated from awaze, qotchqotcha and Tef dough, traditional Ethiopian fermented foods. Internet Journal of Food Safety 2010, 12:187-191.
53. Devirgiliis C., Caravelli A., Coppola D., Barile S., Perozzi G. Antibiotic resistance and microbial composition along the manufacturing process of Mozzarella di Bufala Campana. International Journal of Food Microbiology 2008, 128:378-384.
54. Devirgiliis C., Coppola D., Barile S., Colonna B., Perozzi G. Characterization of the Tn916 conjugative transposon in a food-borne strain of Lactobacillus paracasei. Applied and Environmental Microbiology 2009, 75:3866-3871.
55. Devirgiliis C., Zinno P., Perozzi G. Update on antibiotic resistance in foodborne Lactobacillus and Lactococcus species. Frontiers in Microbiology 2013, 4:301.
56. Egervärn M. Antibiotic Resistance in Lactobacillus reuteri and Lactobacillus plantarum. Egervärn, Maria (2009). Diss. (sammanfattning/summary) Uppsala: Sveriges lantbruksuniv., Acta Universitatis agriculturae Sueciae 2009, 1652-6880. Doctoral thesis.
57. Egervärn M., Roos S., Lindmark H. Identification and characterization of antibiotic resistance genes in Lactobacillus reuteri and Lactobacillus plantarum. Journal of Applied Microbiology 2009, 107:1658-1668.
58. Egervärn M., Lindmark H., Olsson J., Roos S. Transferability of a tetracycline 19 resistance gene from probiotic Lactobacillus reuteri to bacteria in the gastrointestinal 20 tract of humans. Antonie Van Leeuwenhoek 2010, 97:189-200.
59. European Food Safety Authority The European Union summary report on antimicrobial resistance in zoonotic and indicator bacteria from humans, animals and food in the European Union in 2010. EFSA Journal 2012, 10:2598.
60. European Food Safety Authority Guidance on the assessment of bacterial susceptibility to antimicrobials of human and veterinary importance. EFSA Journal 2012, 10:2740.
61. Feld L., Bielak E., Hammer K., Wilcks A. Characterization of a small erythromycin resistance plasmid pLFE1 from the food-isolate Lactobacillus plantarum M345. Plasmid 2009, 61:159-170.
62. Flórez A.B., Delgado S., Mayo B. Antimicrobial susceptibility of lactic acid bacteria isolated from a cheese environment. Canadian Journal of Microbiology 2005, 51:51-58.
63. Flórez A.B., Ammor M.S., Mayo B. Identification of tet(M) in two Lactococcus lactis strains isolated from a Spanish traditional starter-free cheese made of raw milk and conjugative transfer of tetracycline resistance to lactococci and enterococci. International Journal of Food Microbiology 2008, 121:189-194.
64. Fons M., Hégé T., Ladiré M., Raibaud P., Ducluzeau R., Maguin E. Isolation and characterization of a plasmid from Lactobacillus fermentum conferring erythromycin resistance. Plasmid 1997, 37:199-203.
65. Franko B., Vaillant M., Recule C., Vautrin E., Brion J.P., Pavese P. Lactobacillus paracasei endocarditis in a consumer of probiotics. Médecine et Maladies Infectieuses 2013, 43:171-173.
66. Franz C.M.A.P., Cho G.Y., Holzapfel W.H. Probiotics: Taxonomy and technological features. Probiotic and Prebiotic Foods: Technology, Stability and Benefits to Human Health 2011, Nova Science Publishers, Hauppauge, New York, USA. N.P. Shah, A. Gomes da Cruz, J. de Assis Fonseca Faria (Eds.).
67. Fukao M., Tomita H., Yakabe T., Nomura T., Ike Y., Yajima N. Assessment of antibiotic resistance in probiotic strain Lactobacillus brevis KB290. Journal of Food Protection 2009, 72:1923-1929.
68. Fukao M., Oshima K., Morita H., Toh H., Suda W., Kim S.-W., et al. Genomic analysis by deep sequencing of the probiotic Lactobacillus brevis KB290 harboring nine plasmids reveals genomic stability. PLoS ONE 2013, 8:e60521.
69. Ganjian H., Nikokar I., Tieshayar A., Mostafaei A., Amirmozafari N., Kiani S. Effects of salt stress on the antimicrobial drug resistance and protein profile of Staphylococcus aureus. Jundishapur Journal of Microbiology 2012, 5:328-331.
70. Garrigues C., Johansen E., Crittenden R. Pangenomics-an avenue to improved industrial starter cultures and probiotics. Current Opinion in Biotechnology 2013, 24:187-191.
71. Ge B., Jiang P., Han F. Identification and antimicrobial susceptibility of lactic acid bacteria from retail fermented foods. Journal of Food Protection 2007, 70:2606-2612.
72. Gevers D., Danielsen M., Huys G., Swings J. Molecular characterization of tet(M) genes in Lactobacillus isolates from different types of fermented dry sausage. Applied and Environmental Microbiology 2003, 69:1270-1275.
73. Gfeller K.Y., Roth M., Meile L., Teuber M. Sequence and genetic organization of the 19.3-kb erythromycin- and dalfopristin resistance plasmid pLME300 from Lactobacillus fermentum ROT1. Plasmid 2003, 50:190-201.
74. Giraffa G., Chanishvili N., Widyastuti Y. Importance of lactobacilli in food and feed biotechnology. Research in Microbiology 2010, 161:480-487.
75. Hammes W.P., Vogel R.F. The genus Lactobacillus. The genera of lactic acid bacteria 1995, 19-54. Blackie Academic and Professional, Glasgow, UK. B.J.B. Wood, W.H. Holzapfel (Eds.).
76. Han J.H., Li X.F., Gao W.H., Walczak P., Zhang B.L., Jia Y.M. Susceptibility of Lactobacillus pentosus strains isolated from fermented products to streptomycin and kanamycin. International Food Research Journal 2013, 20:1927-1931.
77. Handwerger S., Pucci M.J., Volk K.J., Liu J., Lee M.S. Vancomycin-resistant Leuconostoc mesenteroides and Lactobacillus casei synthesize cytoplasmic peptidoglycan precursors that terminate in lactate. Journal of Bacteriology 1994, 176:260-264.
78. Hansen E.B. Commercial bacterial starter cultures for fermented foods of the future. International Journal of Food Microbiology 2002, 78:119-131.
79. Harty D.W.S., Oakey H.J., Patrikakis M., Hume E.B., Knox K.W. Pathogenic potential of lactobacilli. International Journal of Food Microbiology 1994, 24:179-189.
80. Hebert E.M., Raya R.R., Brown L., Font de Valdez G., Savoy de Giori G., Taranto M.P. Genome sequence of the cheese-starter strain Lactobacillus delbrueckii subsp. lactis CRL 581. Genome Announcements 2013, 1:e00602-e00613.
81. Heller K.J. Probiotic bacteria in fermented foods: Product characteristics and starter organisms. The American Journal of Clinical Nutrition 2001, 73:374s-379s.
82. Herreros, M. A., Sandoval, H., González, L., Castro, J. M, Fresno, J. M., & Tornadijo, M.E. (2005). Antimicrobial activity and antibiotic resistance of lactic acid bacteria isolated from armada cheese (a Spanish goats' milk cheese). Food Microbiology, 22, 455-459.
83. Hleba L., Kačániová M., Pavelková A., Čuboň J. Antibiotic resistance of lactobacilli strains isolated from milk and milk products from middle Slovakia. Journal of Microbiology, Biotechnology and Food Sciences 2012, 2:253-262.
84. Hochwind K., Weinmaier T., Schmid M., van Hemert S., Hartmann A., Rattei T., et al. Draft genome sequence of Lactobacillus casei W56. Journal of Bacteriology 2012, 194:6638.
85. Holzapfel W.H. Appropriate starter culture technologies for small-scale fermentation in developing countries. International Journal of Food Microbiology 2002, 75:197-212.
86. Honi U., Sabrin F., Islam T., Islam E., Billah M., Islam K.D. Enzymatic activity and antibiotic resistance profile of Lactobacillus paracasei ssp. paracasei-1 isolated from regional yogurts of Bangladesh. Journal of Microbiology Biotechnology and Food Sciences 2013, 3:235-239.
87. Hou C., Wang Q., Zeng X., Yang F., Zhang J., Liu H., et al. Complete genome sequence of Lactobacillus reuteri I5007, a probiotic strain isolated from healthy piglet. Journal of Biotechnology 2013, 179:63-64.
88. Hugenholtz P. The genera of lactic acid bacteria 1998, Blackie Academic and Professional, London, UK.
89. Hummel A.S., Hertel C., Holzapfel W.H., Franz C.M.A.P. Antibiotic resistances of starter and probiotic strains of lactic acid bacteria. Applied and Environmental Microbiology 2007, 73:730-739.
90. Huovinen P. Trimethoprim resistance. Antimicrobial Agents and Chemotherapy 1987, 31:1451-1456.
91. International Organization for Standardization Milk and milk products-determination of the minimal inhibitory concentration (MIC) of antibiotics applicable to bifidobacteria and non-enterococcal lactic acid bacteria (LAB). ISO 10932/IDF 233 standard 2010.
92. Jayashree S., Pooja S., Pushpanathan M., Vishnu U., Sankarasubramanian J., Rajendhran J., et al. Genome sequence of Lactobacillus fermentum strain MTCC 8711, a probiotic bacterium isolated from yogurt. Genome Announcements 2013, 1:e00770-13. 10.1128/genomeA.00770-13.
93. Jokovic N., Nikolic M., Begovic J., Jovcic B., Savic D., Topisirovic L. A survey of the lactic acid bacteria isolated from Serbian artisanal dairy product kajmak. International Journal of Food Microbiology 2008, 125:305-311.
94. Kaleta P., O'Callaghan J., Fitzgerald G.F., Beresford T.P., Ross R.P. Crucial role for insertion sequence elements in Lactobacillus helveticus evolution as revealed by interstrain genomic comparison. Applied and Environmental Microbiology 2010, 76:212-220.
95. Kant R., Paulin L., Alatalo E., de Vos W.M., Palva A. Genome sequence of Lactobacillus amylovorus GRL1118, isolated from pig ileum. Journal of Bacteriology 2011, 193:3147-3148.
96. Kant R., Blom J., Pavla A., Siezen R.J., de Vos W.M. Comparative genomics of Lactobacillus. Microbial Biotechnology 2011, 4:323-332.
97. Karlyshev A.V., Raju K., Abramov V.M. Draft genome sequence of Lactobacillus fermentum strain 3872. Genome Announcements 2013, 1:e01006-e01013.
98. Karlyshev A.V., Abramov V.M. Draft genome sequence of Lactobacillus plantarum 2165. Genome Announcements 2014, 2:e01179-13. 10.1128/genomeA.01179-13.
99. Kastner S., Perreten V., Bleuler H., Hugenschmidt G., Lacroix C., Meile L. Antibiotic susceptibility patterns and resistance genes of starter cultures and probiotic bacteria used in food. Systematic and Applied Microbiology 2006, 29:145-155.
100. Katla A.K., Kruse H., Johnsen G., Herikstad H. Antimicrobial susceptibility of starter culture bacteria used in Norwegian dairy products. International Journal of Food Microbiology 2001, 67:147-152.
101. Kim K.S., Morrison J.O., Bayer A.S. Deficient autolytic enzyme activity in antibiotic-tolerant lactobacilli. Infection and Immunity 1982, 36:582-585.
102. Klaenhammer T.R., de Vos W.M. An incredible scientific journey. The evolutionary tale of the lactic acid bacteria. The 10th LAB symposium. Thirty years of research on lactic acid bacteria 2011, 1-11. 24 Media Labs. A. Ledeboer, J. Hugenholtz, J. Kok, W. Konings, J. Wouters (Eds.).
103. Klare I., Konstabel C., Müller-Bertling S., Reissbrodt R., Huys G., Vancanneyt M., et al. Evaluation of new broth media for microdilution antibiotic susceptibility testing of lactobacilli, pediococci, lactococci, and bifidobacteria. Applied and Environmental Microbiology 2005, 71:8982-8986.
104. Klare I., Konstabel C., Werner G., Huys G., Vankerckhoven V., Kahlmeter G., et al. Antimicrobial susceptibilities of Lactobacillus, Pediococcus and Lactococcus human isolates and cultures intended for probiotic or nutritional use. Journal of Antimicrobial Chemotherapy 2007, 59:900-912.
105. Kleerebezem M., Boekhorst J., van Kranenburg R., Molenaar D., Kuipers O.P., Leer R., et al. Complete genome sequence of Lactobacillus plantarum WCFS1. Proceedings of the National Academy of Sciences of the United States of America 2003, 100. (1990-1995).
106. Klein G. Antibiotic resistance and molecular characterization of probiotic and clinical Lactobacillus strains in relation to safety aspects of probiotics. Foodborne Pathogens and Disease 2011, 8:267-281.
107. Klein G., Zill E., Schindler R., Louwers J. Peritonitis associated with vancomycin-resistant Lactobacillus rhamnosus in a continuous ambulatory peritoneal dialysis patient: Organism identification, antibiotic therapy, and case report. Journal of Clinical Microbiology 1998, 36:1781-1783.
108. Klein G., Hallmann C., Casas I.A., Abad J., Louwers J., Reuter G. Exclusion of vanA, vanB and vanC type glycopeptide resistance in strains of Lactobacillus reuteri and Lactobacillus rhamnosus used as probiotics by polymerase chain reaction and hybridization methods. Journal of Applied Microbiology 2000, 89:815-824.
109. Koryszewska-Bagińska A., Bardowski J., Aleksandrzak-Piekarczyk T. Genome sequence of the probiotic strain Lactobacillus rhamnosus (formerly Lactobacillus casei) LOCK908. Genome Announcements 2014, 2:e00120-14. 10.1128/genomeA.00120-14.
110. Ladero V., Alvarez-Sieiro P., Redruello B., del Rio B., Linares D.M., Cruz Martin M., et al. Draft genome sequence of Lactobacillus plantarum strain IPLA 88. Genome Announcements 2013, 1:e00524-13. 10.1128/genomeA.00524-13.
111. Ladero V., Herrero-Fresno A., Martinez N., del Río B., Linares D.M., Fernández M., et al. Genome sequence analysis of the biogenic amine-degrading strain Lactobacillus casei 5b. Genome Announcements 2014, 2:e01199-13. 10.1128/genomeA.01199-13.
112. Lamontanara A., Caggianiello G., Orrù L., Capozzi V., Michelotti V., Bayjanov J.R., et al. Draft genome sequence of Lactobacillus plantarum Lp90 isolated from wine. Genome Announcements 2015, 3:e00097-15. 10.1128/genomeA.00097-15.
113. Lapsiri W., Nitisinprasert S., Wanchaitanawong P. Lactobacillus plantarum strains from fermented vegetables as potential probiotics. Kasetsart Journal (Natural Science) 2011, 45:1071-1082.
114. Lavanya B., Sowmiya S., Balaji S., Muthuvelan B. Screening and characterization of lactic acid bacteria from fermented milk. British Journal of Dairy Sciences 2011, 2:5-10.
115. Lee J.H., Chae J.P., Lee J.Y., Lim J.S., Kim G.B. Genome sequence of Lactobacillus johnsonii PF01, isolated from piglet feces. Journal of Bacteriology 2011, 193:5030-5031.
116. Leroy F., De Vuyst L. Temperature and pH conditions that prevail during fermentation of sausages are optimal for production of the antilisterial bacteriocin sakacin K. Applied and Environmental Microbiology 1999, 65:974-981.
117. Li X., Gu Q., Lou X., Zhang X., Song D., Shen L., et al. Complete genome sequence of the probiotic Lactobacillus plantarum strain ZJ316. Genome Announcements 2013, 1:e00094-13. 10.1128/genomeA.00094-13.
118. Liasi S.A., Azmi T.I., Hassan M.D., Shuhaimi M., Rosfarizan M., Ariff A.B. Antimicrobial activity and antibiotic sensitivity of three isolates of lactic acid bacteria from fermented fish product, Budu. Malaysian Journal of Microbiology 2009, 5:33-37.
119. Lim H.I., Lee J., Jang J.Y., Park H.W., Choi H.-J., Kim T.-W., et al. Draft genome sequence of Lactobacillus sakei strain wikim 22, isolated from Kimchi in Chungcheong Province, South Korea. Genome Announcements 2014, 2:e01296-14. 10.1128/genomeA.01296-14.
120. Lin C.F., Fung Z.F., Wu C.L., Chung T.C. Molecular characterization of a plasmid-borne (pTC82) chloramphenicol resistance determinant (cat-TC) from Lactobacillus reuteri G4. Plasmid 1996, 36:116-124.
121. Liu C., Zhang Z.Y., Dong K., Yuan J.P., Guo X.K. Antibiotic resistance of probiotic strains of lactic acid bacteria isolated from marketed foods and drugs. Biomedical and Environmental Sciences 2009, 22:401-412.
122. Liu S.-B., Qiao L.-P., He H.-L., Zhang Q., Chen X.-L., Zhou W.-Z., et al. Optimization of fermentation conditions and rheological properties of exopolysaccharide produced by deep-sea bacterium Zunongwangia profunda SM-A87. PLoS ONE 2011, 6:e26825.
123. Luh K.T., Hsueh P.R., Teng L.J., Pan H.J., Chen Y.C., Lu J.J., et al. Quinupristin-dalfopristin resistance among Gram-positive bacteria in Taiwan. Antimicrobial Agents and Chemotherapy 2000, 44:3374-3380.
124. Malik S., Siezen R.J., Renckens B., Vaneechoutte M., Vanderleyden J., Lebeer S. Draft genome sequence of Lactobacillus plantarum CMPG5300, a human vaginal isolate. Genome Announcements 2014, 2:e01149-14. 10.1128/genomeA.01149-14.
125. Makarova K., Slesarev A., Wolf Y., Sorokin A., Mirkin B., Koonin E., et al. Comparative genomics of the lactic acid bacteria. Proceedings of the National Academy of Sciences of the United States of America 2006, 103:15,611-15,616.
126. Marshall B.M., Ochieng D.J., Levy S.B. Commensals: Underappreciated reservoir of antibiotic resistance. Microbe 2009, 4:231-238.
127. Martins A., Makita M., Fernandes M.H., Fernandes M.J., Barreto A.S., Fraqueza M.J. Phenotypic and genotypic characterization of Lactobacillus sakei isolated from portuguese fermented meat products for tetracycline resistance. Poster 59th ICoMST 2013.
128. Mater D.D., Langella P., Corthier G., Flores M.J. A probiotic Lactobacillus strain can acquire vancomycin resistance during digestive transit in mice. Journal of Molecular Microbiology and Biotechnology 2008, 14:123-127.
129. Mathur S., Singh R. Antibiotic resistance in food lactic acid bacteria-a review. International Journal of Food Microbiology 2005, 105:281-295.
130. Mazé A., Boel G., Zúñiga M., Bourand A., Loux V., Yebra M.J., et al. Complete genome sequence of the probiotic Lactobacillus casei strain BL23. Journal of Bacteriology 2010, 192:2647-2648.
131. McLeod A., Brede D.A., Rud I., Axelsson L. Genome sequence of Lactobacillus sakei subsp. sakei LS25, a commercial starter culture strain for fermented sausage. Genome Announcements 2013, 1:e00475-13. 10.1128/genomeA.00475-13.
132. McMahon M.A., McDowell D.A., Blair I.S. The pattern of pleiomorphism in stressed Salmonella Virchow populations is nutrient and growth phase dependent. Letters in Applied Microbiology 2007, 45:276-281.
133. Mokhbi A., Kaid-Harche M., Lamri K., Rezki M., Kacem M. Selection of Lactobacillus plantarum strains for their use as starter culturesin Algerian olive fermentations. Grasas y Aceites 2009, 60:82-88.
134. Morelli L., Sarra P.G., Bottazzi V. In vivo transfer of pAMßl from Lactobacillus reuteri to Enterococcus faecalis. Journal of Applied Bacteriology 1988, 65:371-375.
135. Morelli L., Zonenenschain D., Del Piano M., Cognein P. Utilization of the intestinal tract as a delivery system for urogenital probiotics. Journal of Clinical Gastroenterology 2004, 38:S107-S100.
136. Morita H., Toh H., Fukuda S., Horikawa H., Oshima K., Suzuki T., et al. Comparative genome analysis of Lactobacillus reuteri and Lactobacillus fermentum reveal a genomic island for reuterin and cobalamin production. DNA Research 2008, 15:151-161.
137. Nam Y.-D., Lee S.-Y., Lim S.-I. Microbial community analysis of Korean soybean pastes by next-generation sequencing. International Journal of Food Microbiology 2012, 155:36-42.
138. Nawaz M., Wang J., Zhou A., Ma C., Wu X., Moore J.E., et al. Characterization and transfer of antibiotic resistance in lactic acid bacteria from fermented food products. Current Microbiology 2011, 62:1081-1089.
139. Naz S., Tareb R., Bernardeau M., Vaisse M., Lucchetti-Miganeh C., Rechenmann M., et al. Genome sequence of Lactobacillus plantarum strain UCMA 3037. Genome Announcements 2013, 1:e00251-13. 10.1128/genomeA.00251-13.
140. Nei T., Inai S., Mikami I., Sato A., Okamoto J., Yokoshima K., et al. Descending necrotizing mediastinitis associated with Lactobacillus plantarum. BMC Infectious Diseases 2013, 13:398.
141. O'Brien T.F. Emergence, spread, and environmental effect of antimicrobial resistance: How use of an antimicrobial anywhere can increase resistance to any antimicrobial anywhere else. Clinical Infectious Diseases 2002, 34:S78-S84.
142. Oguntoyinbo F.A., Tourlomousis P., Gasson M., Narbad A. Analysis of bacterial communities of traditional fermented West African cereal foods using culture-independent methods. International Journal of Food Microbiology 2011, 145:205-210.
143. Oh S., Roh H., Ko H.J., Kim S., Kim K.H., Lee S.E., et al. Complete genome sequencing of Lactobacillus acidophilus 30SC, isolated from swine intestine. Journal of Bacteriology 2011, 193:2882-2883.
144. Olukoya D.K., Ebigwei S.I., Adebawo O.O., Osiyemi F.O. Plasmid profiles and antibiotic susceptibility patterns of Lactobacillus isolated from fermented foods in Nigeria. Food Microbiology 1993, 10:279-285.
145. Ouoba L.I., Lei V., Jensen L.B. Resistance of potential probiotic lactic acid bacteria and bifidobacteria of African and European origin to antimicrobials: Determination and transferability of the resistance genes to other bacteria. International Journal of Food Microbiology 2008, 121:217-224.
146. Pan L., Hu X., Wang X. Assessment of antibiotic resistance of lactic acid bacteria in Chinese fermented foods. Food Control 2011, 22:1316-1321.
147. Patel A.R., Shah N.P., Prajapati J.B. Antibiotic resistance profile of lactic acid bacteria and their implications in food chain. World Journal of Dairy & Food Sciences 2012, 7:202-211.
148. Pérez Pulido R., Benomar N., Abriouel H., Lucas López R., Martínez Cañamero M., Gálvez A. Microbiological study of lactic acid fermentation of caper berries by molecular and culture-dependent methods. Applied and Environmental Microbiology 2005, 71:7872-7879.
149. Poole K. Efflux mediated antimicrobial resistance. Antibiotic Discoveryand Development 2012, 349-395. Springer, New York, USA. T.J. Dougherty, M.J. Pucci (Eds.).
150. Putman M., van Veen H.W., Degener J.E., Konings W.N. The lactococcal secondary multidrug transporter LmrP confers resistance to lincosamides, macrolides, streptogramins and tetracyclines. Microbiology 2001, 147:2873-2880.
151. Reynolds, P.E. (1998). Control of peptidoglycan synthesis in vancomycin-resistant enterococci: D,D-peptidases and D,D-carboxypeptidases. Cellular and Molecular Life Sciences, 54, 325-331.
152. Rosander A., Connolly E., Roos S. Removal of antibiotic resistance gene-carrying plasmids from Lactobacillus reuteri ATCC 55730 and characterization of the resulting daughter strain, L. reuteri DSM 17938. Applied and Environmental Microbiology 2008, 74:6032-6040.
153. Rozila A., Rajandara P., Lani M.N., Siti Hasmah M., Ezni Suryani I., Ragupathy R., et al. Antibiotic resistant of Lactobacillus isolated from dairy products. UMT 11th International Annual Symposium on Sustainability Science and Management 09th-11th July 2012 2012, Malaysia, Terengganu.
154. Ruoff K.L., Kuritzkes D.R., Wolfson J.S., Ferraro M.J. Vancomycin resistant Gram-positive bacteria isolated from human sources. Journal of Clinical Microbiology 1988, 26:2064-2068.
155. Salminen S., von Wright A., Morelli L., Marteau P., Brassart D., de Vos W., et al. Demonstration of safety of probiotics-a review. International Journal of Food Microbiology 1998, 44:93-106.
156. Savadogo A., Ouattara C.A.T., Ilboudo A.J., Karou D., Traore A.S. Isolation and susceptibility to antibiotics of bacterial strains from Burkina Faso fermented milk samples. Advance Journal of Food Science and Technology 2010, 2:91-95.
157. Schlegel L., Lemerle S., Geslin P. Lactobacillus species as opportunistic pathogens in immunocompromised patients. European Journal of Clinical Microbiology & Infectious Diseases 1998, 17:887-888.
158. Schleifer K.H., Ludwig V. Phylogenetics relationships of lactic acid bacteria. The genera of lactic acid bacteria 1995, 7-17. Chapman and Hall, Glasgow, UK. B.J.B. Wood, W.H. Holzapfel (Eds.).
159. Schmidt G., Hertel C., Hammes W.P. Molecular characterization of the dnaK operon of Lactobacillus sakei LTH681. Systematic and Applied Microbiology 1999, 22:321-328.
160. Schneider D., Lenski R.E. Dynamics of insertion sequence elements during experimental evolution of bacteria. Research in Microbiology 2004, 155:319-327.
161. Settanni L., Moschetti G. Non-starter lactic acid bacteria used to improve cheese quality and provide health benefits. Food Microbiology 2010, 27:691-697.
162. Shrago A.W., Dobrogosz W.J. Conjugal transfer of Group B streptococcal plasmids and co-mobilization of E. coli-Streptococcus shuttle plasmids to L. plantarum. Applied and Environmental Microbiology 1988, 54:824-826.
163. Simeoni D., Rizzotti L., Cocconcelli P., Gazzola S., Dellaglio F., Torriani S. Antibiotic resistance genes and identification of staphylococci collected from the production chain of swine meat commodities. Food Microbiology 2008, 25:196-201.
164. Smokvina T., Wels M., Polka J., Chervaux C., Brisse S., Boekhorst J., et al. Lactobacillus paracasei comparative genomics: Towards species pan-genome definition and exploitation of diversity. PLoS ONE 2013, 8.
165. Snydman D.R. The safety of probiotics. Clinical Infectious Diseases 2008, 46:S104-S111.
166. Soomro A.H., Masud T. Probiotic characteristics of Lactobacillus spp. isolated from fermented milk product Dahi. Food Science and Technology Research 2012, 18:91-98.
167. Sornplang P., Leelavatcharamas V., Sukon P., Yowarach S. Antibiotic resistance of lactic acid bacteria isolated from a fermented fish product, Pla-chom. Research Journal of Microbiology 2011, 6:898-903.
168. Sun Z., Chen X., Wang J., Zhao W., Shao Y., Guo Z., et al. Complete genome sequence of Lactobacillus delbrueckii subsp. bulgaricus strain ND02. Journal of Bacteriology 2011, 193:3426-3427.
169. Swenson K.I., Piwnica-Worms H., McNamee H., Paul D.L. Tyrosine phosphorylation of the gap junction protein connexin43 is required for the pp60v-src-induced inhibition of communication. Cell Regulation 1990, 1:989-1002.
170. Tamang J.P., Kailasapathy K. Fermented foods and beverages of the world (pp. 149-190) 2010, CRC Press, Boca Raton, USA.
171. Tannock G.W. A special fondness for lactobacilli. Applied and Environmental Microbiology 2004, 70:3189-3194.
172. Temmerman R., Scheirlinck I., Huys G., Swings J. Culture-independent analysis of probiotic products by denaturing gradient gel electrophoresis. Applied and Environmental Microbiology 2003, 69:220-226.
173. Teuber M. Spread of antibiotic resistance with food-borne pathogens. Cellular and Molecular Life Sciences 1999, 56:755-763.
174. Teuber M., Meile L., Schwarz F. Acquired antibiotic resistance in lactic acid bacteria from food. Antonie Van Leeuwenhoek 1999, 76:115-137.
175. Thumu S.C., Halami P.M. Presence of erythromycin and tetracycline resistance genes in lactic acid bacteria from fermented foods of Indian origin 2012, 102:541-551. Antonie Van Leeuwenhoek.
176. Toh H., Oshima K., Nakano A., Takahata M., Murakami M., Takaki T., et al. Genomic adaptation of the Lactobacillus casei group. PLoS ONE 2013, 8:e75073.
177. Tompkins T.A., Barreau G., Broadbent J.R. Complete genome sequence of Lactobacillus helveticus R0052, a commercial probiotic strain. Journal of Bacteriology 2012, 194:6349.
178. Turnidge J.D., Bell J.M. Antimicrobial susceptibility on solid media. Antibiotics in laboratory medicine 2005, 8-60. Lippincott Williams and Wilkins, Baltimore, USA. A. Lorian (Ed.).
179. Tynkynnen S., Singh D.V., Varmanen P. Vancomycin resistance factor of Lactobacillus rhamnosus GG in relation to enterococcal vancomycin resistance (van) genes. International Journal of Food Microbiology 1998, 41(195):204.
180. Vahabnezhad E., Mochon A.B., Wozniak L.J., Ziring D.A. Lactobacillus bacteremia associated with probiotic use in a pediatric patient with ulcerative colitis. Journal of Clinical Gastroenterology 2013, 47:437-439.
181. van de Guchte M., Penaud S., Grimaldi C., Barbe V., Bryson K., Nicolas P., et al. The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution. Proceedings of the National Academy of Sciences of the United States of America 2006, 103:9274-9279.
182. van Hoek A.H.A.M., Margolles A., Domig K.J., Korhonen J.M., Zycka-Krzesinska J., Bardowski J.K., et al. Molecular assessment of erythromycin and tetracycline resistance genes in lactic acid bacteria and bifidobacteria and their relation to the phenotypic resistance. International Journal of Probiotics and Prebiotics 2008, 3:271-280.
183. van Reenen C.A., Dicks L.M. Horizontal gene transfer amongst probiotic lactic acid bacteria and other intestinal microbiota: What are the possibilities. A review. Archives of Microbiology 2011, 193:157-168.
184. Vandamme P., Peeters C. Time to revisit polyphasic taxonomy. Antonie Van Leeuwenhoek 2014, 106:57-65.
185. Verraes C., Van Boxstael S., Van Meervenne E., Van Coillie E., Butaye P., Catry B., et al. Antimicrobial resistance in the food chain: A review. International Journal of Environmental Research and Public Health 2013, 10:2643-2669.
186. Vescovo M., Morelli L., Bottazzi V. Drug resistance plasmids in Lactobacillus acidophilus and Lactobacillus reuteri. Applied and Environmental Microbiology 1982, 43:50-56.
187. Wang T.T., Lee B.H. Plasmids in Lactobacillus. Critical Reviews in Biotechnology 1997, 17:227-272.
188. Wang Y., Wang J., Ahmed Z., Bai X., Wang J. Complete genome sequence of Lactobacillus kefiranofaciens ZW3. Journal of Bacteriology 2011, 193:4280-4281.
189. Wang Y., Chen C., Ai L., Zhou F., Zhou Z., Wang L., et al. Complete genome sequence of the probiotic Lactobacillus plantarum ST-III. Journal of Bacteriology 2011, 193:313-314.
190. Wang S., Zhu H., He F., Luo Y., Kang Z., Lu C., et al. Whole genome sequence of the probiotic strain Lactobacillus paracasei N1115, isolated from traditional Chinese fermented milk. Genome Announcements 2014, 2:e00059-14. 10.1128/genomeA.00059-14.
191. White D.G., Acar J., Anthony F., Franklin A., Gupta R., Nicholls T., et al. Antimicrobial resistance: Standardisation and harmonisation of laboratory methodologies for the detection and quantification of antimicrobial resistance. Revue scientifique et technique (International Office of Epizootics 2001, 20:849-858.
192. Weisblum, B. (1995). Erythromycin resistance by ribosome modification. Antimicrobial Agents and Chemotherapy, 39, 577-585.
193. Yüksekdağ Z.N., Beyatli Y. Antimicrobial activity and antibiotic susceptibility of some lactic acid bacteria isolated different dairy products. Archiv für Lebensmittelhygiene 2008, 59:216-220.
194. Zago M., Fornasari M.E., Carminati D., Burns P., Suarez V., Vinderola G. Characterization and probiotic potential of Lactobacillus plantarum strains isolated from cheeses. Food Microbiology 2011, 28:1033-1040.
195. Zdolec N., Kozačinski L., Njari B., Filipović I., Hadžiosmanović M., Mioković B., et al. The antimicrobial effect of lactobacilli on some foodborne bacteria. Archiv für Lebensmittelhygiene 2009, 60:115-119.
196. Zdolec N., Filipović I., Cvrtila Fleck Ž., Marić A., Jankuloski D., Kozačinski L., et al. Antimicrobial susceptibility of lactic acid bacteria isolated from fermented sausages and raw cheese. Veterinarski arhiv 2011, 81:133-141.
197. Zhang Z.-Y., Liu C., Zhu Y.-Z., Zhong Y., Zhu Y.-Q., Zheng H.-J., et al. Complete genome sequence of Lactobacillus plantarum JDM1. Journal of Bacteriology 2009, 15:5020-5021.
198. Zhang, W., Yu, D., Sun, Z., Wu R., Chen X., Chen W., et al. (2010). Complete genome sequence of Lactobacillus casei Zhang, a new probiotic strain isolated from traditional home-made koumiss in Inner Mongolia of China. Journal of Bacteriology, 192, 5268-9.
199. Zhang Z.G., Ye Z.Q., Yu L., Shi P. Phylogenomic reconstruction of lactic acid bacteria: An update. BMC Evolutionary Biology 2011, 11:1.
200. Zhao W., Chen Y., Sun Z., Wang J., Zhou Z., Sun T., et al. Complete genome sequence of Lactobacillus helveticus H10. Journal of Bacteriology 2011, 193:2666-2667. Back ← Abstract ↓ Descriptors ↓ Top ↑.
201. Zheng H.-J., Wang B.-F., Zhang X.-L., Han H., Lu G., Jin L., et al. The complete genome sequence of Lactobacillus delbrueckii subsp. bulgaricus 2038. Trends in Cell & Molecular Biology 2008, 3:15-30.
202. Zhou J.S., Pillidge C.J., Gopal P.K., Gill H.S. Antibiotic susceptibility profiles of new probiotic Lactobacillus and Bifidobacterium strains. International Journal of Food Microbiology 2005, 98:211-217.
203. Zhou N., Zhang J.X., Fan M.T., Wang J., Guo G., Wei X.Y. Antibiotic resistance of lactic acid bacteria isolated from Chinese yogurts. Journal of Dairy Science 2012, 95:4775-4783.
204. Zonenschain D., Rebecchi A., Morelli L. Erythromycin- and tetracycline-resistant lactobacilli in Italian fermented dry sausages. Journal of Applied Microbiology 2009, 107:1559-1568.