Genome sequence of Lactobacillus sakei subsp. sakei LS25, a commercial starter culture strain for fermented sausage

Genome Announcements

Volumn 1, Issue 4, 2013, Pages

  McLeod, Anette ^a   Brede, Dag Anders ^b   Rud, Ida ^a   Axelsson, Lars ^a  

^a NOFIMA   (Norway)

^b NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84997610698     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00475-13     Document Type: Article

References (20)

1. Claesson MJ, van Sinderen D, O'Toole PW. 2007. The genus Lactobacillus-a genomic basis for understanding its diversity. FEMS Microbiol. Lett. 269:22-28.
2. Makarova K, Slesarev A, Wolf Y, Sorokin A, Mirkin B, Koonin E, Pavlov A, Pavlova N, Karamychev V, Polouchine N, Shakhova V, Grigoriev I, Lou Y, Rohksar D, Lucas S, Huang K, Goodstein DM, Hawkins T, Plengvidhya V, Welker D, Hughes J, Goh Y, Benson A, Baldwin K, Lee JH, Diaz-Muniz I, Dosti B, Smeianov V, Wechter W, Barabote R, Lorca G, Altermann E, Barrangou R, Ganesan B, Xie Y, Rawsthorne H, Tamir D, Parker C, Breidt F, Broadbent J, Hutkins R, O'Sullivan D, Steele J, Unlu G, Saier M, Klaenhammer T, Richardson P, Kozyavkin S, Weimer B, Mills D. 2006. Comparative genomics of the lactic acid bacteria. Proc. Natl. Acad. Sci. U. S. A. 103:15611-15616.
3. Makarova KS, Koonin EV. 2007. Evolutionary genomics of lactic acid bacteria. J. Bacteriol. 189:1199-1208.
4. Hammes WP, Bantleon A, Min S. 1990. Lactic acid bacteria in meat fermentation. FEMS Microbiol. Rev. 87:165-174.
5. Hammes WP, Hertel C. 1998. New developments in meat starter cultures. Meat Sci. 49:125-138.
6. Lyhs U, Björkroth J, Korkeala H. 1999. Characterisation of lactic acid bacteria from spoiled, vacuum-packaged, cold-smoked rainbow trout using ribotyping. Int. J. Food Microbiol. 52:77-84.
7. Leroi F, Joffraud JJ, Chevalier F, Cardinal M. 1998. Study of the microbial ecology of cold-smoked salmon during storage at 8 degrees C. Int. J. Food Microbiol. 39:111-121.
8. Bredholt S, Nesbakken T, Holck A. 1999. Protective cultures inhibit growth of Listeria monocytogenes and Escherichia coli O157:H7 in cooked, sliced, vacuum-and gas-packaged meat. Int. J. Food Microbiol. 53:43-52.
9. Bredholt S, Nesbakken T, Holck A. 2001. Industrial application of an antilisterial strain of Lactobacillus sakei as a protective culture and its effect on the sensory acceptability of cooked, sliced, vacuum-packaged meats. Int. J. Food Microbiol. 66:191-196.
10. Castellano P, Aristoy MC, Sentandreu MA, Vignolo G, Toldra F. 2012. Lactobacillus sakei CRL1862 improves safety and protein hydrolysis in meat systems. J. Appl. Microbiol. 113:1407-1416.
11. Chaillou S, Champomier-Vergès M-C, Cornet M, Crutz-Le Coq A-M, Dudez A-M, Martin V BS, Darbon-Rongère E, Bossy R, Loux V, Zagorec M. 2005. The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K. Nat. Biotechnol. 23: 1527-1533.
12. Klein G, Dicks LMT, Pack A, Hack B, Zimmerman K, Dellaglio F, Reuter G. 1996. Emended description of Lactobacillus sake (Katahiri, Katahara and Fukami) and Lactobacillus curvatus (Abo-Elnega Kandler): numerical classification revealed by protein fingerprinting and identification based on biochemical patterns and DNA-DNA hybridizations. Int. J. Syst. Bacteriol. 46:367-376.
13. Torriani S, Van Reenen GA, Klein G, Reuter G, Dellaglio F, Dicks LM. 1996. Lactobacillus curvatus subsp. curvatus subsp. nov. and Lactobacillus curvatus subsp. melibiosus subsp. nov. and Lactobacillus sake subsp. sake subsp. nov. and Lactobacillus sake subsp. carnosus subsp. nov., new subspecies of Lactobacillus curvatus Abo-Elnaga and Kandler 1965 and Lactobacillus sake Katagiri, Kitahara, and Fukami 1934 (Klein et al. 1996, emended descriptions), respectively. Int. J. Syst. Bacteriol. 46:1158-1163.
14. Chaillou S, Daty M, Baraige F, Dudez A-M, Anglade P, Jones R, Alpert C-A, Champomier-Vergés M-C, Zagorec M. 2009. Intraspecies genomic diversity and natural population structure of the meat-borne lactic acid bacterium Lactobacillus sakei. Appl. Environ. Microbiol. 75:970-980.
15. McLeod A, Nyquist OL, Snipen L, Naterstad K, Axelsson L. 2008. Diversity of Lactobacillus sakei strains investigated by phenotypic and genotypic methods. Syst. Appl. Microbiol. 31:393-403.
16. Nyquist OL, McLeod A, Brede DA, Snipen L, Aakra A, Nes IF. 2011. Comparative genomics of Lactobacillus sakei with emphasis on strains from meat. Mol. Genet. Genomics 285:297-311.
17. 2+. Meat Sci. 55:161-168.
18. McLeod A, Snipen L, Naterstad K, Axelsson L. 2011. Global transcriptome response in Lactobacillus sakei during growth on ribose. BMC Microbiol. 11:145.
19. McLeod A, Zagorec M, Champomier-Vergés MC, Naterstad K, Axelsson L. 2010. Primary metabolism in Lactobacillus sakei food isolates by proteomic analysis. BMC Microbiol. 10:120.
20. Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD, Reich C, Stevens R, Vassieva O, Vonstein V, Wilke A, Zagnitko O. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9:75.