-
1
-
-
84876808409
-
From essential to persistent genes: a functional approach to constructing synthetic life
-
Acevedo-Rocha, C.G., Fang, G., Schmidt, M., Ussery, D.W., and Danchin, A. (2013) From essential to persistent genes: a functional approach to constructing synthetic life. Trends Genet 29: 273–279.
-
(2013)
Trends Genet
, vol.29
, pp. 273-279
-
-
Acevedo-Rocha, C.G.1
Fang, G.2
Schmidt, M.3
Ussery, D.W.4
Danchin, A.5
-
2
-
-
77957329119
-
Isoprenoid pathway optimization for taxol precursor overproduction in Escherichia coli
-
Ajikumar, P.K., Xiao, W.H., Tyo, K.E.J., Wang, Y., Simeon, F., Leonard, E., et al. (2010) Isoprenoid pathway optimization for taxol precursor overproduction in Escherichia coli. Science 330: 70–74.
-
(2010)
Science
, vol.330
, pp. 70-74
-
-
Ajikumar, P.K.1
Xiao, W.H.2
Tyo, K.E.J.3
Wang, Y.4
Simeon, F.5
Leonard, E.6
-
3
-
-
85056975530
-
The metabolic redox regime of Pseudomonas putida tunes its evolvability towards novel xenobiotic substrates
-
In press
-
Akkaya, Ö., Pérez-Pantoja, D., Calles, B., Nikel, P.I. and de Lorenzo, V. (2018) The metabolic redox regime of Pseudomonas putida tunes its evolvability towards novel xenobiotic substrates. bioRxiv, In press https://doi.org/10.1101/314989
-
(2018)
bioRxiv
-
-
Akkaya, Ö.1
Pérez-Pantoja, D.2
Calles, B.3
Nikel, P.I.4
de Lorenzo, V.5
-
4
-
-
84968626472
-
Microbial production of polyhydroxyalkanoates (PHAs) and its copolymers: a review of recent advancements
-
Anjum, A., Zuber, M., Zia, K.M., Noreen, A., Anjum, M.N., and Tabasum, S. (2016) Microbial production of polyhydroxyalkanoates (PHAs) and its copolymers: a review of recent advancements. Int J Biol Macromol 89: 161–174.
-
(2016)
Int J Biol Macromol
, vol.89
, pp. 161-174
-
-
Anjum, A.1
Zuber, M.2
Zia, K.M.3
Noreen, A.4
Anjum, M.N.5
Tabasum, S.6
-
5
-
-
34247141488
-
Bacillus minimum genome factory: effective utilization of microbial genome information
-
Ara, K., Ozaki, K., Nakamura, K., Yamane, K., Sekiguchi, J., and Ogasawara, N. (2007) Bacillus minimum genome factory: effective utilization of microbial genome information. Biotechnol Appl Biochem 46: 169–178.
-
(2007)
Biotechnol Appl Biochem
, vol.46
, pp. 169-178
-
-
Ara, K.1
Ozaki, K.2
Nakamura, K.3
Yamane, K.4
Sekiguchi, J.5
Ogasawara, N.6
-
6
-
-
85036541667
-
Directed evolution: bringing new chemistry to life
-
Arnold, F.H. (2018) Directed evolution: bringing new chemistry to life. Angew Chem Int Ed Engl 57: 4143–4148.
-
(2018)
Angew Chem Int Ed Engl
, vol.57
, pp. 4143-4148
-
-
Arnold, F.H.1
-
7
-
-
77955552920
-
Accumulation of gene-targeted Bacillus subtilis mutations that enhance fermentative inosine production
-
Asahara, T., and Mori, Y. (2010) Accumulation of gene-targeted Bacillus subtilis mutations that enhance fermentative inosine production. Appl Microbiol Biotechnol 87: 2195–2207.
-
(2010)
Appl Microbiol Biotechnol
, vol.87
, pp. 2195-2207
-
-
Asahara, T.1
Mori, Y.2
-
8
-
-
85035311783
-
Holistic bioengineering: rewiring central metabolism for enhanced bioproduction
-
Aslan, S., Noor, E., and Bar-Even, A. (2017) Holistic bioengineering: rewiring central metabolism for enhanced bioproduction. Biochem J 474: 3935–3950.
-
(2017)
Biochem J
, vol.474
, pp. 3935-3950
-
-
Aslan, S.1
Noor, E.2
Bar-Even, A.3
-
9
-
-
78650647970
-
Evolution, genomic analysis, and reconstruction of isobutanol tolerance in Escherichia coli
-
Atsumi, S., Wu, T.Y., Machado, I.M.P., Huang, W.C., Chen, P.Y., Pellegrini, M., and Liao, J.C. (2010) Evolution, genomic analysis, and reconstruction of isobutanol tolerance in Escherichia coli. Mol Syst Biol 6: 449.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 449
-
-
Atsumi, S.1
Wu, T.Y.2
Machado, I.M.P.3
Huang, W.C.4
Chen, P.Y.5
Pellegrini, M.6
Liao, J.C.7
-
10
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
-
Baba, T., Ara, T., Hasegawa, M., Takai, Y., Okumura, Y., Baba, M., et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2: 2006.0008.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 2006.0008
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
-
11
-
-
84937411096
-
Production of biopharmaceuticals in E. coli: current scenario and future perspectives
-
Baeshen, M.N., Al-Hejin, A.M., Bora, R.S., Ahmed, M.M.M., Ramadan, H.A.I., Saini, K.S., et al. (2015) Production of biopharmaceuticals in E. coli: current scenario and future perspectives. J Microbiol Biotechnol 25: 953–962.
-
(2015)
J Microbiol Biotechnol
, vol.25
, pp. 953-962
-
-
Baeshen, M.N.1
Al-Hejin, A.M.2
Bora, R.S.3
Ahmed, M.M.M.4
Ramadan, H.A.I.5
Saini, K.S.6
-
12
-
-
79955019471
-
Poly(glutamic acid)—An emerging biopolymer of commercial interest
-
Bajaj, I., and Singhal, R. (2011) Poly(glutamic acid)—An emerging biopolymer of commercial interest. Bioresour Technol 102: 5551–5561.
-
(2011)
Bioresour Technol
, vol.102
, pp. 5551-5561
-
-
Bajaj, I.1
Singhal, R.2
-
13
-
-
84864801619
-
Bio-based production of chemicals, materials and fuels—Corynebacterium glutamicum as versatile cell factory
-
Becker, J., and Wittmann, C. (2012) Bio-based production of chemicals, materials and fuels—Corynebacterium glutamicum as versatile cell factory. Curr Opin Biotechnol 23: 631–640.
-
(2012)
Curr Opin Biotechnol
, vol.23
, pp. 631-640
-
-
Becker, J.1
Wittmann, C.2
-
14
-
-
84960390972
-
Opportunities and challenges in biological lignin valorization
-
Beckham, G.T., Johnson, C.W., Karp, E.M., Salvachúa, D., and Vardon, D.R. (2016) Opportunities and challenges in biological lignin valorization. Curr Opin Biotechnol 42: 40–53.
-
(2016)
Curr Opin Biotechnol
, vol.42
, pp. 40-53
-
-
Beckham, G.T.1
Johnson, C.W.2
Karp, E.M.3
Salvachúa, D.4
Vardon, D.R.5
-
15
-
-
17444405636
-
Biocatalytic production of perillyl alcohol from limonene by using a novel Mycobacterium sp. cytochrome P450 alkane hydroxylase expressed in Pseudomonas putida
-
van Beilen, J.B., Holtackers, R., Lüscher, D., Bauer, U., Witholt, B., and Duetz, W.A. (2005) Biocatalytic production of perillyl alcohol from limonene by using a novel Mycobacterium sp. cytochrome P450 alkane hydroxylase expressed in Pseudomonas putida. Appl Environ Microbiol 71: 1737–1744.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 1737-1744
-
-
van Beilen, J.B.1
Holtackers, R.2
Lüscher, D.3
Bauer, U.4
Witholt, B.5
Duetz, W.A.6
-
16
-
-
84946746207
-
Chassis optimization as a cornerstone for the application of synthetic biology based strategies in microbial secondary metabolism
-
Beites, T., and Mendes, M.V. (2015) Chassis optimization as a cornerstone for the application of synthetic biology based strategies in microbial secondary metabolism. Front Microbiol 6: 906.
-
(2015)
Front Microbiol
, vol.6
, pp. 906
-
-
Beites, T.1
Mendes, M.V.2
-
17
-
-
84964771581
-
The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis
-
Belda, E., van Heck, R.G.A., López-Sánchez, M.J., Cruveiller, S., Barbe, V., Fraser, C., et al. (2016) The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis. Environ Microbiol 18: 3403–3424.
-
(2016)
Environ Microbiol
, vol.18
, pp. 3403-3424
-
-
Belda, E.1
van Heck, R.G.A.2
López-Sánchez, M.J.3
Cruveiller, S.4
Barbe, V.5
Fraser, C.6
-
18
-
-
79952533706
-
Biosynthesis of zeaxanthin in recombinant Pseudomonas putida
-
Beuttler, H., Hoffmann, J., Jeske, M., Hauer, B., Schmid, R.D., Altenbuchner, J., and Urlacher, V.B. (2011) Biosynthesis of zeaxanthin in recombinant Pseudomonas putida. Appl Microbiol Biotechnol 89: 1137–1147.
-
(2011)
Appl Microbiol Biotechnol
, vol.89
, pp. 1137-1147
-
-
Beuttler, H.1
Hoffmann, J.2
Jeske, M.3
Hauer, B.4
Schmid, R.D.5
Altenbuchner, J.6
Urlacher, V.B.7
-
19
-
-
84871009667
-
Manipulation of the anoxic metabolism in Escherichia coli by ArcB deletion variants in the ArcBA two-component system
-
Bidart, G.N., Ruiz, J.A., de Almeida, A., Méndez, B.S., and Nikel, P.I. (2012) Manipulation of the anoxic metabolism in Escherichia coli by ArcB deletion variants in the ArcBA two-component system. Appl Environ Microbiol 78: 8784–8794.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 8784-8794
-
-
Bidart, G.N.1
Ruiz, J.A.2
de Almeida, A.3
Méndez, B.S.4
Nikel, P.I.5
-
20
-
-
52449130902
-
Metabolic response of Pseudomonas putida during redox biocatalysis in the presence of a second octanol phase
-
Blank, L.M., Ionidis, G., Ebert, B.E., Bühler, B., and Schmid, A. (2008) Metabolic response of Pseudomonas putida during redox biocatalysis in the presence of a second octanol phase. FEBS J 275: 5173–5190.
-
(2008)
FEBS J
, vol.275
, pp. 5173-5190
-
-
Blank, L.M.1
Ionidis, G.2
Ebert, B.E.3
Bühler, B.4
Schmid, A.5
-
21
-
-
33646081787
-
An efficient method of selectable marker gene excision by Xer recombination for gene replacement in bacterial chromosomes
-
Bloor, A.E., and Cranenburgh, R.M. (2006) An efficient method of selectable marker gene excision by Xer recombination for gene replacement in bacterial chromosomes. Appl Environ Microbiol 72: 2520–2525.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 2520-2525
-
-
Bloor, A.E.1
Cranenburgh, R.M.2
-
22
-
-
85016635869
-
The unexhausted potential of E. coli
-
Blount, Z.D. (2015) The unexhausted potential of E. coli. eLife 4, e05826.
-
(2015)
eLife
, vol.4
-
-
Blount, Z.D.1
-
23
-
-
45849093668
-
Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli
-
Blount, Z.D., Borland, C.Z., and Lenski, R.E. (2008) Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli. Proc Nat Acad Sci USA 105: 7899–7906.
-
(2008)
Proc Nat Acad Sci USA
, vol.105
, pp. 7899-7906
-
-
Blount, Z.D.1
Borland, C.Z.2
Lenski, R.E.3
-
24
-
-
84960423472
-
Systems analysis of methylerythritol-phosphate pathway flux in E. coli: insights into the role of oxidative stress and the validity of lycopene as an isoprenoid reporter metabolite
-
Bongers, M., Chrysanthopoulos, P.K., Behrendorff, J.B.Y.H., Hodson, M.P., Vickers, C.E., and Nielsen, L.K. (2015) Systems analysis of methylerythritol-phosphate pathway flux in E. coli: insights into the role of oxidative stress and the validity of lycopene as an isoprenoid reporter metabolite. Microb Cell Fact 14: 193.
-
(2015)
Microb Cell Fact
, vol.14
, pp. 193
-
-
Bongers, M.1
Chrysanthopoulos, P.K.2
Behrendorff, J.B.Y.H.3
Hodson, M.P.4
Vickers, C.E.5
Nielsen, L.K.6
-
25
-
-
84981316232
-
Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering
-
Borg, Y., Grigonyte, A.M., Boeing, P., Wolfenden, B., Smith, P., Beaufoy, W., et al. (2016) Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. PeerJ 4: e2031.
-
(2016)
PeerJ
, vol.4
-
-
Borg, Y.1
Grigonyte, A.M.2
Boeing, P.3
Wolfenden, B.4
Smith, P.5
Beaufoy, W.6
-
26
-
-
84902105273
-
Marine bacteria from the Roseobacter clade produce sulfur volatiles via amino acid and dimethylsulfoniopropionate catabolism
-
Brock, N.L., Menke, M., Klapschinski, T.A., and Dickschat, J.S. (2014) Marine bacteria from the Roseobacter clade produce sulfur volatiles via amino acid and dimethylsulfoniopropionate catabolism. Org Biomol Chem 12: 4318–4323.
-
(2014)
Org Biomol Chem
, vol.12
, pp. 4318-4323
-
-
Brock, N.L.1
Menke, M.2
Klapschinski, T.A.3
Dickschat, J.S.4
-
27
-
-
84964509986
-
Development of a commercial scale process for production of 1,4-butanediol from sugar
-
Burgard, A., Burk, M.J., Osterhout, R., van Dien, S., and Yim, H. (2016) Development of a commercial scale process for production of 1,4-butanediol from sugar. Curr Opin Biotechnol 42: 118–125.
-
(2016)
Curr Opin Biotechnol
, vol.42
, pp. 118-125
-
-
Burgard, A.1
Burk, M.J.2
Osterhout, R.3
van Dien, S.4
Yim, H.5
-
28
-
-
84978767428
-
Broad-host-range ProUSER vectors enable fast characterization of inducible promoters and optimization of p-coumaric acid production in Pseudomonas putida KT2440
-
Calero, P., Jensen, S.I., and Nielsen, A.T. (2016) Broad-host-range ProUSER vectors enable fast characterization of inducible promoters and optimization of p-coumaric acid production in Pseudomonas putida KT2440. ACS Synth Biol 5: 741–753.
-
(2016)
ACS Synth Biol
, vol.5
, pp. 741-753
-
-
Calero, P.1
Jensen, S.I.2
Nielsen, A.T.3
-
29
-
-
85036507453
-
Genome-wide identification of tolerance mechanisms toward p-coumaric acid in Pseudomonas putida
-
Calero, P., Jensen, S.I., Bojanovič, K., Lennen, R.M., Koza, A., and Nielsen, A.T. (2018) Genome-wide identification of tolerance mechanisms toward p-coumaric acid in Pseudomonas putida. Biotechnol Bioeng 115: 762–774.
-
(2018)
Biotechnol Bioeng
, vol.115
, pp. 762-774
-
-
Calero, P.1
Jensen, S.I.2
Bojanovič, K.3
Lennen, R.M.4
Koza, A.5
Nielsen, A.T.6
-
30
-
-
85045122442
-
Metabolic engineering tools in model cyanobacteria
-
In press
-
Carroll, A.L., Case, A.E., Zhang, A. and Atsumi, S. (2018) Metabolic engineering tools in model cyanobacteria. Metab Eng, In press https://doi.org/10.1016/j.ymben.2018.1003.1014
-
(2018)
Metab Eng
-
-
Carroll, A.L.1
Case, A.E.2
Zhang, A.3
Atsumi, S.4
-
31
-
-
34447522100
-
Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: genomic and flux analysis
-
del Castillo, T., Ramos, J.L., Rodríguez-Herva, J.J., Fuhrer, T., Sauer, U., and Duque, E. (2007) Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: genomic and flux analysis. J Bacteriol 189: 5142–5152.
-
(2007)
J Bacteriol
, vol.189
, pp. 5142-5152
-
-
del Castillo, T.1
Ramos, J.L.2
Rodríguez-Herva, J.J.3
Fuhrer, T.4
Sauer, U.5
Duque, E.6
-
32
-
-
84878639396
-
The Entner-Doudoroff pathway empowers Pseudomonas putida KT2440 with a high tolerance to oxidative stress
-
Chavarría, M., Nikel, P.I., Pérez-Pantoja, D., and de Lorenzo, V. (2013) The Entner-Doudoroff pathway empowers Pseudomonas putida KT2440 with a high tolerance to oxidative stress. Environ Microbiol 15: 1772–1785.
-
(2013)
Environ Microbiol
, vol.15
, pp. 1772-1785
-
-
Chavarría, M.1
Nikel, P.I.2
Pérez-Pantoja, D.3
de Lorenzo, V.4
-
33
-
-
85046659548
-
Engineering bacteria for enhanced polyhydroxyalkanoates (PHA) biosynthesis
-
Chen, G.Q., and Jiang, X.R. (2017) Engineering bacteria for enhanced polyhydroxyalkanoates (PHA) biosynthesis. Synth Syst Biotechnol 2: 192–197.
-
(2017)
Synth Syst Biotechnol
, vol.2
, pp. 192-197
-
-
Chen, G.Q.1
Jiang, X.R.2
-
34
-
-
23444448779
-
Enhancement of inosine production by Bacillus subtilis through suppression of carbon overflow by sodium citrate
-
Chen, S., Chu, J., Zhuang, Y., and Zhang, S. (2005) Enhancement of inosine production by Bacillus subtilis through suppression of carbon overflow by sodium citrate. Biotechnol Lett 27: 689–692.
-
(2005)
Biotechnol Lett
, vol.27
, pp. 689-692
-
-
Chen, S.1
Chu, J.2
Zhuang, Y.3
Zhang, S.4
-
35
-
-
84966309386
-
A novel strategy for protein production using non‑classical secretion pathway in Bacillus subtilis
-
Chen, J., Zhao, L., Fu, G., Zhou, W., Sun, Y., Zheng, P. and Sun, J. (2016) A novel strategy for protein production using non‑classical secretion pathway in Bacillus subtilis. Microb Cell Fact 15, 1–16.
-
(2016)
Microb Cell Fact
, vol.15
, pp. 1-16
-
-
Chen, J.1
Zhao, L.2
Fu, G.3
Zhou, W.4
Sun, Y.5
Zheng, P.6
Sun, J.7
-
36
-
-
85019133551
-
Optimization of the extraction and purification of the compatible solute ectoine from Halomonas elongate in the laboratory experiment of a commercial production project
-
Chen, R., Zhu, L., Lv, L., Yao, S., Li, B., and Qian, J. (2017) Optimization of the extraction and purification of the compatible solute ectoine from Halomonas elongate in the laboratory experiment of a commercial production project. World J Microbiol Biotechnol 33: 1–7.
-
(2017)
World J Microbiol Biotechnol
, vol.33
, pp. 1-7
-
-
Chen, R.1
Zhu, L.2
Lv, L.3
Yao, S.4
Li, B.5
Qian, J.6
-
37
-
-
84957428248
-
Minimal genome: worthwhile or worthless efforts toward being smaller?
-
Choe, D., Cho, S., Kim, S.C., and Cho, B.K. (2016) Minimal genome: worthwhile or worthless efforts toward being smaller? Biotechnol J 11: 199–211.
-
(2016)
Biotechnol J
, vol.11
, pp. 199-211
-
-
Choe, D.1
Cho, S.2
Kim, S.C.3
Cho, B.K.4
-
38
-
-
84904280695
-
Overexpression of a non-native deoxyxylulose-dependent vitamin B6 pathway in Bacillus subtilis for the production of pyridoxine
-
Commichau, F.M., Alzinger, A., Sande, R., Bretzel, W., Meyer, F.M., Chevreux, B., et al. (2014) Overexpression of a non-native deoxyxylulose-dependent vitamin B6 pathway in Bacillus subtilis for the production of pyridoxine. Metab Eng 25: 38–49.
-
(2014)
Metab Eng
, vol.25
, pp. 38-49
-
-
Commichau, F.M.1
Alzinger, A.2
Sande, R.3
Bretzel, W.4
Meyer, F.M.5
Chevreux, B.6
-
40
-
-
85029539622
-
Multiplex genome editing by natural transformation (MuGENT) for synthetic biology in Vibrio natriegens
-
Dalia, T.N., Hayes, C.A., Stolyar, S., Marx, C.J., McKinlay, J.B., and Dalia, A.B. (2017) Multiplex genome editing by natural transformation (MuGENT) for synthetic biology in Vibrio natriegens. ACS Synth Biol 6: 1650–1655.
-
(2017)
ACS Synth Biol
, vol.6
, pp. 1650-1655
-
-
Dalia, T.N.1
Hayes, C.A.2
Stolyar, S.3
Marx, C.J.4
McKinlay, J.B.5
Dalia, A.B.6
-
41
-
-
84983283570
-
Unknown unknowns: essential genes in quest for function
-
Danchin, A., and Fang, G. (2016) Unknown unknowns: essential genes in quest for function. Microb Biotechnol 9: 530–540.
-
(2016)
Microb Biotechnol
, vol.9
, pp. 530-540
-
-
Danchin, A.1
Fang, G.2
-
42
-
-
84887376499
-
Constraints in the design of the synthetic bacterial chassis
-
Danchin, A., and Sekowska, A. (2013) Constraints in the design of the synthetic bacterial chassis. Methods Microbiol 40: 39–67.
-
(2013)
Methods Microbiol
, vol.40
, pp. 39-67
-
-
Danchin, A.1
Sekowska, A.2
-
43
-
-
84938847096
-
Rational engineering of Geobacter sulfurreducens electron transfer components: a foundation for building improved Geobacter-based bioelectrochemical technologies
-
Dantas, J.M., Morgado, L., Aklujkar, M., Bruix, M., Londer, Y.Y., Schiffer, M., et al. (2015) Rational engineering of Geobacter sulfurreducens electron transfer components: a foundation for building improved Geobacter-based bioelectrochemical technologies. Front Microbiol 6: 752.
-
(2015)
Front Microbiol
, vol.6
, pp. 752
-
-
Dantas, J.M.1
Morgado, L.2
Aklujkar, M.3
Bruix, M.4
Londer, Y.Y.5
Schiffer, M.6
-
44
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko, K.A., and Wanner, B.L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97: 6640–6645.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
45
-
-
85050641846
-
Engineering limonene and bisabolene production in wild type and a glycogen-deficient mutant of Synechococcus sp. PCC 7002
-
Davies, F.K., Work, V.H., Beliaev, A.S., and Posewitz, M.C. (2014) Engineering limonene and bisabolene production in wild type and a glycogen-deficient mutant of Synechococcus sp. PCC 7002. Front Bioeng Biotechnol 2: 21.
-
(2014)
Front Bioeng Biotechnol
, vol.2
, pp. 21
-
-
Davies, F.K.1
Work, V.H.2
Beliaev, A.S.3
Posewitz, M.C.4
-
46
-
-
84923870734
-
High cell density cultivation of Pseudomonas putida KT2440 using glucose without the need for oxygen enriched air supply
-
Davis, R., Duane, G., Kenny, S.T., Cerrone, F., Guzik, M.W., Babu, R.P., et al. (2015) High cell density cultivation of Pseudomonas putida KT2440 using glucose without the need for oxygen enriched air supply. Biotechnol Bioeng 112: 725–733.
-
(2015)
Biotechnol Bioeng
, vol.112
, pp. 725-733
-
-
Davis, R.1
Duane, G.2
Kenny, S.T.3
Cerrone, F.4
Guzik, M.W.5
Babu, R.P.6
-
47
-
-
85038207858
-
RetroPath2.0: a retrosynthesis workflow for metabolic engineers
-
Delépine, B., Duigou, T., Carbonell, P., and Faulon, J.L. (2018) RetroPath2.0: a retrosynthesis workflow for metabolic engineers. Metab Eng 45: 158–170.
-
(2018)
Metab Eng
, vol.45
, pp. 158-170
-
-
Delépine, B.1
Duigou, T.2
Carbonell, P.3
Faulon, J.L.4
-
48
-
-
70349296964
-
Metabolic engineering of cyanobacteria for ethanol production
-
Dexter, J., and Fu, P. (2009) Metabolic engineering of cyanobacteria for ethanol production. Energy Environ Sci 2: 857–864.
-
(2009)
Energy Environ Sci
, vol.2
, pp. 857-864
-
-
Dexter, J.1
Fu, P.2
-
49
-
-
84872143710
-
Bacillus subtilis: from soil bacterium to super-secreting cell factory
-
van Dijl, J.M., and Hecker, M. (2013) Bacillus subtilis: from soil bacterium to super-secreting cell factory. Microb Cell Fact 12: 1–6.
-
(2013)
Microb Cell Fact
, vol.12
, pp. 1-6
-
-
van Dijl, J.M.1
Hecker, M.2
-
50
-
-
33744951971
-
Transcriptional tradeoff between metabolic and stress-response programs in Pseudomonas putida KT2440 cells exposed to toluene
-
Domínguez-Cuevas, P., González-Pastor, J.E., Marqués, S., Ramos, J.L., and de Lorenzo, V. (2006) Transcriptional tradeoff between metabolic and stress-response programs in Pseudomonas putida KT2440 cells exposed to toluene. J Biol Chem 281: 11981–11991.
-
(2006)
J Biol Chem
, vol.281
, pp. 11981-11991
-
-
Domínguez-Cuevas, P.1
González-Pastor, J.E.2
Marqués, S.3
Ramos, J.L.4
de Lorenzo, V.5
-
51
-
-
84913594397
-
The new frontier of genome engineering with CRISPR-Cas9
-
Doudna, J.A., and Charpentier, E. (2014) The new frontier of genome engineering with CRISPR-Cas9. Science 346: 1258096.
-
(2014)
Science
, vol.346
, pp. 1258096
-
-
Doudna, J.A.1
Charpentier, E.2
-
52
-
-
84879489028
-
Adaptive laboratory evolution—Principles and applications for biotechnology
-
Dragosits, M. and Mattanovich, D. (2013) Adaptive laboratory evolution—Principles and applications for biotechnology. Microb Cell Fact 12, 64.
-
(2013)
Microb Cell Fact
, vol.12
, pp. 64
-
-
Dragosits, M.1
Mattanovich, D.2
-
53
-
-
78751638661
-
Engineering cyanobacteria to generate high-value products
-
Ducat, D.C., Way, J.C., and Silver, P.A. (2011) Engineering cyanobacteria to generate high-value products. Trends Biotechnol 29: 95–103.
-
(2011)
Trends Biotechnol
, vol.29
, pp. 95-103
-
-
Ducat, D.C.1
Way, J.C.2
Silver, P.A.3
-
54
-
-
57049138931
-
Towards a genome-wide mutant library of Pseudomonas putida strain KT2440
-
Ramos, J.L., Filloux, A., (eds)., Dordrecht, The Netherlands, Springer
-
Duque, E., Molina-Henares, A.J., de la Torre, J., Molina-Henares, M.A., Castillo, T., Lam, J., and Ramos, J.L. (2007) Towards a genome-wide mutant library of Pseudomonas putida strain KT2440. In Pseudomonas. Ramos, J.L., and Filloux, A. (eds). Dordrecht, The Netherlands: Springer, pp. 227–251.
-
(2007)
Pseudomonas
, pp. 227-251
-
-
Duque, E.1
Molina-Henares, A.J.2
de la Torre, J.3
Molina-Henares, M.A.4
Castillo, T.5
Lam, J.6
Ramos, J.L.7
-
55
-
-
80054104927
-
Generation of a catR deficient mutant of P. putida KT2440 that produces cis, cis-muconate from benzoate at high rate and yield
-
van Duuren, J.B., Wijte, D., Leprince, A., Karge, B., Puchałka, J., Wery, J., et al. (2011) Generation of a catR deficient mutant of P. putida KT2440 that produces cis, cis-muconate from benzoate at high rate and yield. J Biotechnol 156: 163–172.
-
(2011)
J Biotechnol
, vol.156
, pp. 163-172
-
-
van Duuren, J.B.1
Wijte, D.2
Leprince, A.3
Karge, B.4
Puchałka, J.5
Wery, J.6
-
56
-
-
84856577901
-
pH-stat fed-batch process to enhance the production of cis, cis-muconate from benzoate by Pseudomonas putida KT2440-JD1
-
van Duuren, J.B., Wijte, D., Karge, B., Martins dos Santos, V.A.P., Yang, Y., Mars, A.E., and Eggink, G. (2012) pH-stat fed-batch process to enhance the production of cis, cis-muconate from benzoate by Pseudomonas putida KT2440-JD1. Biotechnol Prog 28: 85–92.
-
(2012)
Biotechnol Prog
, vol.28
, pp. 85-92
-
-
van Duuren, J.B.1
Wijte, D.2
Karge, B.3
Martins dos Santos, V.A.P.4
Yang, Y.5
Mars, A.E.6
Eggink, G.7
-
57
-
-
84954144197
-
Exacerbation of substrate toxicity by IPTG in Escherichia coli BL21(DE3) carrying a synthetic metabolic pathway
-
Dvořák, P., Chrást, L., Nikel, P.I., Fedr, R., Soucek, K., Sedlacková, M., et al. (2015) Exacerbation of substrate toxicity by IPTG in Escherichia coli BL21(DE3) carrying a synthetic metabolic pathway. Microb Cell Fact 14: 201.
-
(2015)
Microb Cell Fact
, vol.14
, pp. 201
-
-
Dvořák, P.1
Chrást, L.2
Nikel, P.I.3
Fedr, R.4
Soucek, K.5
Sedlacková, M.6
-
58
-
-
85028355868
-
Bioremediation 3.0: engineering pollutant-removing bacteria in the times of systemic biology
-
Dvořák, P., Nikel, P.I., Damborský, J., and de Lorenzo, V. (2017) Bioremediation 3.0: engineering pollutant-removing bacteria in the times of systemic biology. Biotechnol Adv 35: 845–866.
-
(2017)
Biotechnol Adv
, vol.35
, pp. 845-866
-
-
Dvořák, P.1
Nikel, P.I.2
Damborský, J.3
de Lorenzo, V.4
-
59
-
-
0008467605
-
Pseudomonas natriegens, a marine bacterium with a generation time of less than 10 minutes
-
Eagon, R.G. (1961) Pseudomonas natriegens, a marine bacterium with a generation time of less than 10 minutes. J Bacteriol 83: 736–737.
-
(1961)
J Bacteriol
, vol.83
, pp. 736-737
-
-
Eagon, R.G.1
-
60
-
-
28544451327
-
Foundations for engineering biology
-
Endy, D. (2005) Foundations for engineering biology. Nature 438: 449–453.
-
(2005)
Nature
, vol.438
, pp. 449-453
-
-
Endy, D.1
-
61
-
-
85010908796
-
Synthetic metabolism: metabolic engineering meets enzyme design
-
Erb, T.J., Jones, P.R., and Bar-Even, A. (2017) Synthetic metabolism: metabolic engineering meets enzyme design. Curr Opin Chem Biol 37: 56–62.
-
(2017)
Curr Opin Chem Biol
, vol.37
, pp. 56-62
-
-
Erb, T.J.1
Jones, P.R.2
Bar-Even, A.3
-
62
-
-
28644432584
-
Isolation and characterization of solvent-tolerant Pseudomonas putida strain T-57, and its application to biotransformation of toluene to cresol in a two-phase (organic-aqueous) system
-
Faizal, I., Dozen, K., Hong, C.S., Kuroda, A., Takiguchi, N., Ohtake, H., et al. (2005) Isolation and characterization of solvent-tolerant Pseudomonas putida strain T-57, and its application to biotransformation of toluene to cresol in a two-phase (organic-aqueous) system. J Ind Microbiol Biotechnol 32: 542–547.
-
(2005)
J Ind Microbiol Biotechnol
, vol.32
, pp. 542-547
-
-
Faizal, I.1
Dozen, K.2
Hong, C.S.3
Kuroda, A.4
Takiguchi, N.5
Ohtake, H.6
-
63
-
-
84992751887
-
Enhanced extracellular production of L-asparaginase from Bacillus subtilis 168 by B. subtilis WB600 through a combined strategy
-
Feng, Y., Liu, S., Jiao, Y., Gao, H., Wang, M., and Du, G. (2017) Enhanced extracellular production of L-asparaginase from Bacillus subtilis 168 by B. subtilis WB600 through a combined strategy. Appl Microbiol Biotechnol 101: 1509–1520.
-
(2017)
Appl Microbiol Biotechnol
, vol.101
, pp. 1509-1520
-
-
Feng, Y.1
Liu, S.2
Jiao, Y.3
Gao, H.4
Wang, M.5
Du, G.6
-
64
-
-
85047020620
-
New insights on steroid biotechnology
-
Fernández-Cabezón, L., Galán, B., and García, J.L. (2018) New insights on steroid biotechnology. Front Microbiol 9: 958.
-
(2018)
Front Microbiol
, vol.9
, pp. 958
-
-
Fernández-Cabezón, L.1
Galán, B.2
García, J.L.3
-
65
-
-
47549087897
-
Towards environmental systems biology of Shewanella
-
Fredrickson, J.K., Romine, M.F., Beliaev, A.S., Auchtung, J.M., Driscoll, M.E., Gardner, T.S., et al. (2008) Towards environmental systems biology of Shewanella. Nat Rev Microbiol 6: 592–603.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 592-603
-
-
Fredrickson, J.K.1
Romine, M.F.2
Beliaev, A.S.3
Auchtung, J.M.4
Driscoll, M.E.5
Gardner, T.S.6
-
66
-
-
84896121349
-
Development of Halomonas TD01 as a host for open production of chemicals
-
Fu, X.Z., Tan, D., Aibaidula, G., Wu, Q., Chen, J.C., and Chen, G.Q. (2014) Development of Halomonas TD01 as a host for open production of chemicals. Metab Eng 23: 78–91.
-
(2014)
Metab Eng
, vol.23
, pp. 78-91
-
-
Fu, X.Z.1
Tan, D.2
Aibaidula, G.3
Wu, Q.4
Chen, J.C.5
Chen, G.Q.6
-
67
-
-
84966421127
-
Metabolic engineering of Bacillus subtilis for chiral pure meso-2,3-butanediol production
-
Fu, J., Huo, G., Feng, L., Mao, Y., Wang, Z., Ma, H., and Chen, T. (2016) Metabolic engineering of Bacillus subtilis for chiral pure meso-2,3-butanediol production. Biotechnol Biofuels 9: 90.
-
(2016)
Biotechnol Biofuels
, vol.9
, pp. 90
-
-
Fu, J.1
Huo, G.2
Feng, L.3
Mao, Y.4
Wang, Z.5
Ma, H.6
Chen, T.7
-
68
-
-
0003619022
-
-
Patent PCT/US1997/020292.
-
Gatenby, A.A., Haynie, S.L., Nagarajan, V., Nair, R.V., Nakamura, C.E., Payne, M.S., et al. (1998) Method for the production of 1,3-propanediol by recombinant organisms. Patent PCT/US1997/020292.
-
(1998)
Method for the production of 1,3-propanediol by recombinant organisms
-
-
Gatenby, A.A.1
Haynie, S.L.2
Nagarajan, V.3
Nair, R.V.4
Nakamura, C.E.5
Payne, M.S.6
-
69
-
-
84931563500
-
Deinococcus as new chassis for industrial biotechnology: biology, physiology and tools
-
Gerber, E., Bernard, R., Castang, S., Chabot, N., Coze, F., Dreux-Zigha, A., et al. (2015) Deinococcus as new chassis for industrial biotechnology: biology, physiology and tools. J Appl Microbiol 119: 1–10.
-
(2015)
J Appl Microbiol
, vol.119
, pp. 1-10
-
-
Gerber, E.1
Bernard, R.2
Castang, S.3
Chabot, N.4
Coze, F.5
Dreux-Zigha, A.6
-
70
-
-
77953584054
-
Creation of a bacterial cell controlled by a chemically synthesized genome
-
Gibson, D.G., Glass, J.I., Lartigue, C., Noskov, V.N., Chuang, R.Y., Algire, M.A., et al. (2010) Creation of a bacterial cell controlled by a chemically synthesized genome. Science 329: 52–57.
-
(2010)
Science
, vol.329
, pp. 52-57
-
-
Gibson, D.G.1
Glass, J.I.2
Lartigue, C.3
Noskov, V.N.4
Chuang, R.Y.5
Algire, M.A.6
-
71
-
-
84870996383
-
Making green polymers even greener: Towards sustainable production of polyhydroxyalkanoates from agroindustrial by-products
-
Petre, M., (ed)., InTech, Rijeka, Croatia
-
Gomez, J.G.C., Méndez, B.S., Nikel, P.I., Pettinari, M.J., Prieto, M.A., and Silva, L.F. (2012) Making green polymers even greener: Towards sustainable production of polyhydroxyalkanoates from agroindustrial by-products. In Advances in applied biotechnology. Petre, M. (ed). InTech: Rijeka, Croatia, pp. 41–62.
-
(2012)
Advances in applied biotechnology
, pp. 41-62
-
-
Gomez, J.G.C.1
Méndez, B.S.2
Nikel, P.I.3
Pettinari, M.J.4
Prieto, M.A.5
Silva, L.F.6
-
72
-
-
77953237121
-
Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli
-
Goodarzi, H., Bennett, B.D., Amini, S., Reaves, M.L., Hottes, A.K., Rabinowitz, J.D., and Tavazoie, S. (2010) Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli. Mol Syst Biol 6: 378.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 378
-
-
Goodarzi, H.1
Bennett, B.D.2
Amini, S.3
Reaves, M.L.4
Hottes, A.K.5
Rabinowitz, J.D.6
Tavazoie, S.7
-
73
-
-
84891843349
-
Genetic engineering of Pseudomonas putida KT2440 for rapid and high-yield production of vanillin from ferulic acid
-
Graf, N., and Altenbuchner, J. (2014) Genetic engineering of Pseudomonas putida KT2440 for rapid and high-yield production of vanillin from ferulic acid. Appl Microbiol Biotechnol 98: 137–149.
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 137-149
-
-
Graf, N.1
Altenbuchner, J.2
-
74
-
-
85048835854
-
Advances and prospects of Bacillus subtilis cellular factories: From rational design to industrial applications
-
In press
-
Gu, Y., Xu, X., Wu, Y., Niu, T., Liu, Y., Li, J., et al. (2018) Advances and prospects of Bacillus subtilis cellular factories: From rational design to industrial applications. Metab Eng, In press https://doi.org/10.1016/j.ymben.2018.1005.1006
-
(2018)
Metab Eng
-
-
Gu, Y.1
Xu, X.2
Wu, Y.3
Niu, T.4
Liu, Y.5
Li, J.6
-
75
-
-
84911807303
-
2 , water, and light into the long-chain hydrocarbon farnesene
-
2 , water, and light into the long-chain hydrocarbon farnesene. Appl Microbiol Biotechnol 98: 9869–9877.
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 9869-9877
-
-
Halfmann, C.1
Gu, L.2
Gibbons, W.3
Zhou, R.4
-
76
-
-
19944431737
-
Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome
-
Hashimoto, M., Ichimura, T., Mizoguchi, H., Tanaka, K., Fujimitsu, K., Keyamura, K., et al. (2005) Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome. Mol Microbiol 55: 137–149.
-
(2005)
Mol Microbiol
, vol.55
, pp. 137-149
-
-
Hashimoto, M.1
Ichimura, T.2
Mizoguchi, H.3
Tanaka, K.4
Fujimitsu, K.5
Keyamura, K.6
-
77
-
-
84938950996
-
Engineering microbial cell factories: metabolic engineering of Corynebacterium glutamicum with a focus on non-natural products
-
Heider, S.A., and Wendisch, V.F. (2015) Engineering microbial cell factories: metabolic engineering of Corynebacterium glutamicum with a focus on non-natural products. Biotechnol J 10: 1170–1184.
-
(2015)
Biotechnol J
, vol.10
, pp. 1170-1184
-
-
Heider, S.A.1
Wendisch, V.F.2
-
78
-
-
33751544539
-
Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale
-
Herring, C.D., Raghunathan, A., Honisch, C., Patel, T., Applebee, M.K., Joyce, A.R., et al. (2006) Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale. Nat Genet 38: 1406–1412.
-
(2006)
Nat Genet
, vol.38
, pp. 1406-1412
-
-
Herring, C.D.1
Raghunathan, A.2
Honisch, C.3
Patel, T.4
Applebee, M.K.5
Joyce, A.R.6
-
79
-
-
84928213157
-
Tailoring specialized metabolite production in Streptomyces
-
Hiltner, J.K., Hunter, I.S., and Hoskisson, P.A. (2015) Tailoring specialized metabolite production in Streptomyces. Adv Appl Microbiol 91: 237–255.
-
(2015)
Adv Appl Microbiol
, vol.91
, pp. 237-255
-
-
Hiltner, J.K.1
Hunter, I.S.2
Hoskisson, P.A.3
-
80
-
-
84878186034
-
Genetic manipulations restored the growth fitness of reduced-genome Escherichia coli
-
Hirokawa, Y., Kawano, H., Tanaka-Masuda, K., Nakamura, N., Nakagawa, A., Ito, M., et al. (2013) Genetic manipulations restored the growth fitness of reduced-genome Escherichia coli. J Biosci Bioeng 116: 52–58.
-
(2013)
J Biosci Bioeng
, vol.116
, pp. 52-58
-
-
Hirokawa, Y.1
Kawano, H.2
Tanaka-Masuda, K.3
Nakamura, N.4
Nakagawa, A.5
Ito, M.6
-
81
-
-
85008219283
-
Improvement of 1,3-propanediol production using an engineered cyanobacterium, Synechococcus elongatus by optimization of the gene expression level of a synthetic metabolic pathway and production conditions
-
Hirokawa, Y., Maki, Y., and Hanai, T. (2017) Improvement of 1,3-propanediol production using an engineered cyanobacterium, Synechococcus elongatus by optimization of the gene expression level of a synthetic metabolic pathway and production conditions. Metab Eng 39: 192–199.
-
(2017)
Metab Eng
, vol.39
, pp. 192-199
-
-
Hirokawa, Y.1
Maki, Y.2
Hanai, T.3
-
82
-
-
85032684969
-
High substrate uptake rates empower Vibrio natriegens as production host for industrial biotechnology
-
Hoffart, E., Grenz, S., Lange, J., Nitschel, R., Müller, F., Schwentner, A., et al. (2017) High substrate uptake rates empower Vibrio natriegens as production host for industrial biotechnology. Appl Environ Microbiol 83, e01614–e01617.
-
(2017)
Appl Environ Microbiol
, vol.83
, pp. e01614-e01617
-
-
Hoffart, E.1
Grenz, S.2
Lange, J.3
Nitschel, R.4
Müller, F.5
Schwentner, A.6
-
83
-
-
3242755883
-
Regulation of polyhydroxyalkanoate biosynthesis in Pseudomonas putida and Pseudomonas aeruginosa
-
Hoffmann, N., and Rehm, B.H.A. (2004) Regulation of polyhydroxyalkanoate biosynthesis in Pseudomonas putida and Pseudomonas aeruginosa. FEMS Microbiol Lett 237: 1–7.
-
(2004)
FEMS Microbiol Lett
, vol.237
, pp. 1-7
-
-
Hoffmann, N.1
Rehm, B.H.A.2
-
84
-
-
85034071669
-
Host organisms: Bacillus subtilis
-
Wittmann, C., Liao, J.C., (eds.)., Weinheim, Germany, Wiley-VCH Verlag GmbH & Co.
-
Hohmann, H.P., van Dijl, J.M., Krishnappa, L. and Prágai, Z. (2017) Host organisms: Bacillus subtilis. In Industrial Biotechnology: Microorganisms. Wittmann, C. and Liao, J.C. (eds.). Weinheim, Germany: Wiley-VCH Verlag GmbH & Co., pp. 221–297.
-
(2017)
Industrial Biotechnology: Microorganisms
, pp. 221-297
-
-
Hohmann, H.P.1
van Dijl, J.M.2
Krishnappa, L.3
Prágai, Z.4
-
85
-
-
85041892496
-
Rewriting the metabolic blueprint: advances in pathway diversification in microorganisms
-
Hossain, G.S., Nadarajan, S.P., Zhang, L., Ng, T.K., Foo, J.L., Ling, H., et al. (2018) Rewriting the metabolic blueprint: advances in pathway diversification in microorganisms. Front Microbiol 9: 155.
-
(2018)
Front Microbiol
, vol.9
, pp. 155
-
-
Hossain, G.S.1
Nadarajan, S.P.2
Zhang, L.3
Ng, T.K.4
Foo, J.L.5
Ling, H.6
-
86
-
-
1542423138
-
Production of L-threonine by auxotrophic mutants of Escherichia coli
-
Huang, H.T. (1961) Production of L-threonine by auxotrophic mutants of Escherichia coli. Appl Microbiol 9: 419–424.
-
(1961)
Appl Microbiol
, vol.9
, pp. 419-424
-
-
Huang, H.T.1
-
87
-
-
0342902199
-
Integrated bioproduction and extraction of 3-methylcatechol
-
Hüsken, L.E., Dalm, M.C.F., Tramper, J., Wery, J., de Bont, J.A.M., and Beeftink, R. (2001) Integrated bioproduction and extraction of 3-methylcatechol. J Biotechnol 88: 11–19.
-
(2001)
J Biotechnol
, vol.88
, pp. 11-19
-
-
Hüsken, L.E.1
Dalm, M.C.F.2
Tramper, J.3
Wery, J.4
de Bont, J.A.M.5
Beeftink, R.6
-
88
-
-
84962227074
-
Design and synthesis of a minimal bacterial genome
-
Hutchison, C.A., Chuang, R.Y., Noskov, V.N., Assad-García, N., Deerinck, T.J., Ellisman, M.H., et al. (2016) Design and synthesis of a minimal bacterial genome. Science 351, aad6253.
-
(2016)
Science
, vol.351
, pp. aad6253
-
-
Hutchison, C.A.1
Chuang, R.Y.2
Noskov, V.N.3
Assad-García, N.4
Deerinck, T.J.5
Ellisman, M.H.6
-
89
-
-
0024512944
-
A Pseudomonas thrives in high concentrations of toluene
-
Inoue, A., and Horikoshi, K. (1989) A Pseudomonas thrives in high concentrations of toluene. Nature 338: 264–266.
-
(1989)
Nature
, vol.338
, pp. 264-266
-
-
Inoue, A.1
Horikoshi, K.2
-
90
-
-
84868374643
-
Enhanced butanol production obtained by reinforcing the direct butanol-forming route in Clostridium acetobutylicum
-
Jang, Y.S., Lee, J.Y., Lee, J., Park, J.H., Im, J.A., Eom, M.H., et al. (2012) Enhanced butanol production obtained by reinforcing the direct butanol-forming route in Clostridium acetobutylicum. MBio 3, e00314–12.
-
(2012)
MBio
, vol.3
, pp. e00314-e00312
-
-
Jang, Y.S.1
Lee, J.Y.2
Lee, J.3
Park, J.H.4
Im, J.A.5
Eom, M.H.6
-
91
-
-
84874608929
-
RNA-guided editing of bacterial genomes using CRISPR-Cas systems
-
Jiang, W., Bikard, D., Cox, D., Zhang, F., and Marraffini, L.A. (2013) RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nat Biotechnol 31: 233–239.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 233-239
-
-
Jiang, W.1
Bikard, D.2
Cox, D.3
Zhang, F.4
Marraffini, L.A.5
-
92
-
-
84925355124
-
Multigene editing in the Escherichia coli genome via the CRISPR-Cas9 system
-
Jiang, Y., Chen, B., Duan, C., Sun, B., Yang, J., and Yang, S. (2015) Multigene editing in the Escherichia coli genome via the CRISPR-Cas9 system. Appl Environ Microbiol 81: 2506–2514.
-
(2015)
Appl Environ Microbiol
, vol.81
, pp. 2506-2514
-
-
Jiang, Y.1
Chen, B.2
Duan, C.3
Sun, B.4
Yang, J.5
Yang, S.6
-
93
-
-
0036933805
-
Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440
-
Jiménez, J.I., Miñambres, B., García, J.L., and Díaz, E. (2002) Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440. Environ Microbiol 4: 824–841.
-
(2002)
Environ Microbiol
, vol.4
, pp. 824-841
-
-
Jiménez, J.I.1
Miñambres, B.2
García, J.L.3
Díaz, E.4
-
94
-
-
84956868583
-
Production of specific-molecular-weight hyaluronan by metabolically engineered Bacillus subtilis 168
-
Jin, P., Kang, Z., Yuan, P., Du, G., and Chen, J. (2016) Production of specific-molecular-weight hyaluronan by metabolically engineered Bacillus subtilis 168. Metab Eng 35: 21–30.
-
(2016)
Metab Eng
, vol.35
, pp. 21-30
-
-
Jin, P.1
Kang, Z.2
Yuan, P.3
Du, G.4
Chen, J.5
-
95
-
-
84940111165
-
Impact of synthetic biology and metabolic engineering on industrial production of fine chemicals
-
Jullesson, D., David, F., Pfleger, B., and Nielsen, J. (2015) Impact of synthetic biology and metabolic engineering on industrial production of fine chemicals. Biotechnol Adv 33: 1395–1402.
-
(2015)
Biotechnol Adv
, vol.33
, pp. 1395-1402
-
-
Jullesson, D.1
David, F.2
Pfleger, B.3
Nielsen, J.4
-
96
-
-
85036651462
-
Diversion of the long-chain acyl-ACP pool in Synechocystis to fatty alcohols through CRISPRi repression of the essential phosphate acyltransferase PlsX
-
Kaczmarzyk, D., Cengic, I., Yao, L., and Hudson, E.P. (2018) Diversion of the long-chain acyl-ACP pool in Synechocystis to fatty alcohols through CRISPRi repression of the essential phosphate acyltransferase PlsX. Metab Eng 45: 59–66.
-
(2018)
Metab Eng
, vol.45
, pp. 59-66
-
-
Kaczmarzyk, D.1
Cengic, I.2
Yao, L.3
Hudson, E.P.4
-
97
-
-
85040338163
-
Genetically programmed chiral organoborane synthesis
-
Kan, S.B.J., Huang, X., Gumulya, Y., Chen, K., and Arnold, F.H. (2017) Genetically programmed chiral organoborane synthesis. Nature 552: 132–136.
-
(2017)
Nature
, vol.552
, pp. 132-136
-
-
Kan, S.B.J.1
Huang, X.2
Gumulya, Y.3
Chen, K.4
Arnold, F.H.5
-
98
-
-
0029655167
-
Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome
-
Kaneko, T., Tanaka, A., Sato, S., Kotani, H., Sazuka, T., Miyajima, N., et al. (1995) Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome. DNA Res 2: 153–166.
-
(1995)
DNA Res
, vol.2
, pp. 153-166
-
-
Kaneko, T.1
Tanaka, A.2
Sato, S.3
Kotani, H.4
Sazuka, T.5
Miyajima, N.6
-
99
-
-
78649716727
-
Manufacturing molecules through metabolic engineering
-
Keasling, J.D. (2010) Manufacturing molecules through metabolic engineering. Science 330: 1355–1358.
-
(2010)
Science
, vol.330
, pp. 1355-1358
-
-
Keasling, J.D.1
-
100
-
-
33748240975
-
Enzymatic oxidations of methyl groups on aromatic heterocycles: a versatile method for the preparation of heteroaromatics carboxylic acids
-
Kiener, A. (1992) Enzymatic oxidations of methyl groups on aromatic heterocycles: a versatile method for the preparation of heteroaromatics carboxylic acids. Angew Chem Int Ed Eng 6: 774–775.
-
(1992)
Angew Chem Int Ed Eng
, vol.6
, pp. 774-775
-
-
Kiener, A.1
-
101
-
-
0035916370
-
Metabolic engineering of the nonmevalonate isopentenyl diphosphate synthesis pathway in Escherichia coli enhances lycopene production
-
Kim, S.W., and Keasling, J.D. (2001) Metabolic engineering of the nonmevalonate isopentenyl diphosphate synthesis pathway in Escherichia coli enhances lycopene production. Biotechnol Bioeng 72: 408–415.
-
(2001)
Biotechnol Bioeng
, vol.72
, pp. 408-415
-
-
Kim, S.W.1
Keasling, J.D.2
-
102
-
-
84887648944
-
Transcriptomic fingerprinting of Pseudomonas putida under alternative physiological regimes
-
Kim, J., Oliveros, J.C., Nikel, P.I., de Lorenzo, V., and Silva-Rocha, R. (2013) Transcriptomic fingerprinting of Pseudomonas putida under alternative physiological regimes. Environ Microbiol Rep 5: 883–891.
-
(2013)
Environ Microbiol Rep
, vol.5
, pp. 883-891
-
-
Kim, J.1
Oliveros, J.C.2
Nikel, P.I.3
de Lorenzo, V.4
Silva-Rocha, R.5
-
103
-
-
77249153701
-
Genome-minimized Streptomyces host for the heterologous expression of secondary metabolism
-
Komatsu, M., Uchiyama, T., Omura, S., Cane, D.E., and Ikeda, H. (2010) Genome-minimized Streptomyces host for the heterologous expression of secondary metabolism. Proc Natl Acad Sci USA 107: 2646–2651.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 2646-2651
-
-
Komatsu, M.1
Uchiyama, T.2
Omura, S.3
Cane, D.E.4
Ikeda, H.5
-
104
-
-
84872287714
-
Engineered Streptomyces avermitilis host for heterologous expression of biosynthetic gene cluster for secondary metabolites
-
Komatsu, M., Komatsu, K., Koiwai, H., Yamada, Y., Kozone, I., Izumikawa, M., et al. (2013) Engineered Streptomyces avermitilis host for heterologous expression of biosynthetic gene cluster for secondary metabolites. ACS Synth Biol 2: 384–396.
-
(2013)
ACS Synth Biol
, vol.2
, pp. 384-396
-
-
Komatsu, M.1
Komatsu, K.2
Koiwai, H.3
Yamada, Y.4
Kozone, I.5
Izumikawa, M.6
-
105
-
-
85011856675
-
Construction and analysis of two genome-scale deletion libraries for Bacillus subtilis
-
e297
-
Koo, B.M., Kritikos, G., Farelli, J.D., Todor, H., Tong, K., Kimsey, H., et al. (2017) Construction and analysis of two genome-scale deletion libraries for Bacillus subtilis. Cell Syst 4, 291–305.e297
-
(2017)
Cell Syst
, vol.4
, pp. 291-305
-
-
Koo, B.M.1
Kritikos, G.2
Farelli, J.D.3
Todor, H.4
Tong, K.5
Kimsey, H.6
-
106
-
-
84884196212
-
Lignin to lipid bioconversion by oleaginous Rhodococci
-
Kosa, M., and Ragauskas, A.J. (2013) Lignin to lipid bioconversion by oleaginous Rhodococci. Green Chem 15: 2070–2074.
-
(2013)
Green Chem
, vol.15
, pp. 2070-2074
-
-
Kosa, M.1
Ragauskas, A.J.2
-
107
-
-
84949808982
-
Metabolic engineering of Pseudomonas putida KT2440 to produce anthranilate from glucose
-
Kuepper, J., Dickler, J., Biggel, M., Behnken, S., Jäger, G., Wierckx, N., and Blank, L.M. (2015) Metabolic engineering of Pseudomonas putida KT2440 to produce anthranilate from glucose. Front Microbiol 6: 1–9.
-
(2015)
Front Microbiol
, vol.6
, pp. 1-9
-
-
Kuepper, J.1
Dickler, J.2
Biggel, M.3
Behnken, S.4
Jäger, G.5
Wierckx, N.6
Blank, L.M.7
-
108
-
-
85033720966
-
Potential and limitations of Klebsiella pneumoniae as a microbial cell factory utilizing glycerol as the carbon source
-
Kumar, V., and Park, S. (2018) Potential and limitations of Klebsiella pneumoniae as a microbial cell factory utilizing glycerol as the carbon source. Biotechnol Adv 36: 150–167.
-
(2018)
Biotechnol Adv
, vol.36
, pp. 150-167
-
-
Kumar, V.1
Park, S.2
-
109
-
-
0029006115
-
Salt stress is an environmental signal affecting degradative enzyme synthesis in Bacillus subtilis
-
Kunst, F., and Rapoport, G. (1995) Salt stress is an environmental signal affecting degradative enzyme synthesis in Bacillus subtilis. J Bacteriol 177: 2403–2407.
-
(1995)
J Bacteriol
, vol.177
, pp. 2403-2407
-
-
Kunst, F.1
Rapoport, G.2
-
110
-
-
0030731108
-
The complete genome sequence of the Gram-positive bacterium Bacillus subtilis
-
Kunst, F., Ogasawara, N., Moszer, I., Albertini, A.M., Alloni, G., Azevedo, V., et al. (1997) The complete genome sequence of the Gram-positive bacterium Bacillus subtilis. Nature 390: 249–256.
-
(1997)
Nature
, vol.390
, pp. 249-256
-
-
Kunst, F.1
Ogasawara, N.2
Moszer, I.3
Albertini, A.M.4
Alloni, G.5
Azevedo, V.6
-
111
-
-
84885166683
-
Engineering a synthetic pathway in cyanobacteria for isopropanol production directly from carbon dioxide and light
-
Kusakabe, T., Tatsuke, T., Tsuruno, K., and Hirokawa, Y. (2013) Engineering a synthetic pathway in cyanobacteria for isopropanol production directly from carbon dioxide and light. Metab Eng 20: 101–108.
-
(2013)
Metab Eng
, vol.20
, pp. 101-108
-
-
Kusakabe, T.1
Tatsuke, T.2
Tsuruno, K.3
Hirokawa, Y.4
-
112
-
-
84983349266
-
Using RNA as molecular code for programming cellular function
-
Kushwaha, M., Rostain, W., Prakash, S., Duncan, J.N., and Jaramillo, A. (2016) Using RNA as molecular code for programming cellular function. ACS Synth Biol 5: 795–809.
-
(2016)
ACS Synth Biol
, vol.5
, pp. 795-809
-
-
Kushwaha, M.1
Rostain, W.2
Prakash, S.3
Duncan, J.N.4
Jaramillo, A.5
-
113
-
-
85047214861
-
Solvent tolerance in bacteria: fulfilling the promise of the Biotech Era?
-
In press
-
Kusumawardhani, H., Hosseini, R. and de Winde, J.H. (2018) Solvent tolerance in bacteria: fulfilling the promise of the Biotech Era? Trends Biotechnol, In press https://doi.org/10.1016/j.tibtech.2018.1004.1007
-
(2018)
Trends Biotechnol
-
-
Kusumawardhani, H.1
Hosseini, R.2
de Winde, J.H.3
-
114
-
-
84917705874
-
Use of adaptive laboratory evolution to discover key mutations enabling rapid growth of Escherichia coli K-12 MG1655 on glucose minimal medium
-
LaCroix, R.A., Sandberg, T.E., O'Brien, E.J., Utrilla, J., Ebrahim, A., Guzmán, G.I., et al. (2015) Use of adaptive laboratory evolution to discover key mutations enabling rapid growth of Escherichia coli K-12 MG1655 on glucose minimal medium. Appl Environ Microbiol 81: 17–30.
-
(2015)
Appl Environ Microbiol
, vol.81
, pp. 17-30
-
-
LaCroix, R.A.1
Sandberg, T.E.2
O'Brien, E.J.3
Utrilla, J.4
Ebrahim, A.5
Guzmán, G.I.6
-
115
-
-
84958212306
-
Anoxic metabolism and biochemical production in Pseudomonas putida F1 driven by a bioelectrochemical system
-
Lai, B., Yu, S., Bernhardt, P.V., Rabaey, K., Virdis, B., and Krömer, J.O. (2016) Anoxic metabolism and biochemical production in Pseudomonas putida F1 driven by a bioelectrochemical system. Biotechnol Biofuels 9: 39.
-
(2016)
Biotechnol Biofuels
, vol.9
, pp. 39
-
-
Lai, B.1
Yu, S.2
Bernhardt, P.V.3
Rabaey, K.4
Virdis, B.5
Krömer, J.O.6
-
116
-
-
79958747820
-
Metabolic engineering of cyanobacteria for 1-butanol production from carbon dioxide
-
Lan, E.I., and Liao, J.C. (2011) Metabolic engineering of cyanobacteria for 1-butanol production from carbon dioxide. Metab Eng 13: 353–363.
-
(2011)
Metab Eng
, vol.13
, pp. 353-363
-
-
Lan, E.I.1
Liao, J.C.2
-
117
-
-
85007236642
-
Biotechnological production of aromatic compounds of the extended shikimate pathway from renewable biomass
-
Lee, J.H., and Wendisch, V.F. (2017) Biotechnological production of aromatic compounds of the extended shikimate pathway from renewable biomass. J Biotechnol 257: 211–221.
-
(2017)
J Biotechnol
, vol.257
, pp. 211-221
-
-
Lee, J.H.1
Wendisch, V.F.2
-
118
-
-
85029535377
-
Vibrio natriegens, a new genomic powerhouse
-
In press
-
Lee, H.H., Ostrov, N., Wong, B.G., Gold, M.A., Khalil, A.S. and Church, G.M. (2016) Vibrio natriegens, a new genomic powerhouse. bioRxiv, In press https://doi.org/10.1101/058487
-
(2016)
bioRxiv
-
-
Lee, H.H.1
Ostrov, N.2
Wong, B.G.3
Gold, M.A.4
Khalil, A.S.5
Church, G.M.6
-
119
-
-
84861943059
-
Random and cyclical deletion of large DNA segments in the genome of Pseudomonas putida
-
Leprince, A., de Lorenzo, V., Völler, P., van Passel, M.W.J., and Martins dos Santos, V.A.P. (2012) Random and cyclical deletion of large DNA segments in the genome of Pseudomonas putida. Environ Microbiol 14: 1444–1453.
-
(2012)
Environ Microbiol
, vol.14
, pp. 1444-1453
-
-
Leprince, A.1
de Lorenzo, V.2
Völler, P.3
van Passel, M.W.J.4
Martins dos Santos, V.A.P.5
-
120
-
-
33646082272
-
Rational strain improvement for enhanced clavulanic acid production by genetic engineering of the glycolytic pathway in Streptomyces clavuligerus
-
Li, R., and Townsend, C.A. (2006) Rational strain improvement for enhanced clavulanic acid production by genetic engineering of the glycolytic pathway in Streptomyces clavuligerus. Metab Eng 8: 240–252.
-
(2006)
Metab Eng
, vol.8
, pp. 240-252
-
-
Li, R.1
Townsend, C.A.2
-
121
-
-
84928718106
-
Genome reduction boosts heterologous gene expression in Pseudomonas putida
-
Lieder, S., Nikel, P.I., de Lorenzo, V., and Takors, R. (2015) Genome reduction boosts heterologous gene expression in Pseudomonas putida. Microb Cell Fact 14: 23.
-
(2015)
Microb Cell Fact
, vol.14
, pp. 23
-
-
Lieder, S.1
Nikel, P.I.2
de Lorenzo, V.3
Takors, R.4
-
122
-
-
84992225394
-
Deciphering characteristics of the designer cellulosome from Bacillus subtilis WB800N via enzymatic analysis
-
Lin, C.C., Joe, C., Yap, S., Kan, S.C., Hsueh, N.C., Yang, L.Y., et al. (2017) Deciphering characteristics of the designer cellulosome from Bacillus subtilis WB800N via enzymatic analysis. Biochem Eng J 117: 147–155.
-
(2017)
Biochem Eng J
, vol.117
, pp. 147-155
-
-
Lin, C.C.1
Joe, C.2
Yap, S.3
Kan, S.C.4
Hsueh, N.C.5
Yang, L.Y.6
-
123
-
-
70449336249
-
Engineering a platform for photosynthetic isoprene production in cyanobacteria, using Synechocystis as the model organism
-
Lindberg, P., Park, S., and Melis, A. (2010) Engineering a platform for photosynthetic isoprene production in cyanobacteria, using Synechocystis as the model organism. Metab Eng 12: 70–79.
-
(2010)
Metab Eng
, vol.12
, pp. 70-79
-
-
Lindberg, P.1
Park, S.2
Melis, A.3
-
124
-
-
84906309043
-
Lignin valorization through integrated biological funneling and chemical catalysis
-
Linger, J.G., Vardon, D.R., Guarnieri, M.T., Karp, E.M., and Hunsinger, G.B. (2014) Lignin valorization through integrated biological funneling and chemical catalysis. Proc Nat Acad Sci USA 111: 12013–12018.
-
(2014)
Proc Nat Acad Sci USA
, vol.111
, pp. 12013-12018
-
-
Linger, J.G.1
Vardon, D.R.2
Guarnieri, M.T.3
Karp, E.M.4
Hunsinger, G.B.5
-
125
-
-
85044370375
-
Rapidly moving new bacteria to model-organism status
-
Liu, H., and Deutschbauer, A.M. (2018) Rapidly moving new bacteria to model-organism status. Curr Opin Biotechnol 51: 116–122.
-
(2018)
Curr Opin Biotechnol
, vol.51
, pp. 116-122
-
-
Liu, H.1
Deutschbauer, A.M.2
-
126
-
-
84986247556
-
Applications and advances of metabolite biosensors for metabolic engineering
-
Liu, D., Evans, T., and Zhang, F. (2015) Applications and advances of metabolite biosensors for metabolic engineering. Metab Eng 31: 35–43.
-
(2015)
Metab Eng
, vol.31
, pp. 35-43
-
-
Liu, D.1
Evans, T.2
Zhang, F.3
-
127
-
-
85006851737
-
Metabolic engineering of Bacillus subtilis fueled by systems biology: recent advances and future directions
-
Liu, Y., Li, J., Du, G., Chen, J., and Liu, L. (2017a) Metabolic engineering of Bacillus subtilis fueled by systems biology: recent advances and future directions. Biotechnol Adv 35: 20–30.
-
(2017)
Biotechnol Adv
, vol.35
, pp. 20-30
-
-
Liu, Y.1
Li, J.2
Du, G.3
Chen, J.4
Liu, L.5
-
128
-
-
84896871113
-
Modular pathway engineering of Bacillus subtilis for improved N-acetylglucosamine production
-
Liu, Y., Zhu, Y., Li, J., Shin, H.D., Chen, R.R., Du, G., et al. (2017b) Modular pathway engineering of Bacillus subtilis for improved N-acetylglucosamine production. Metab Eng 23: 42–52.
-
(2017)
Metab Eng
, vol.23
, pp. 42-52
-
-
Liu, Y.1
Zhu, Y.2
Li, J.3
Shin, H.D.4
Chen, R.R.5
Du, G.6
-
129
-
-
84901202594
-
Spatial modulation of key pathway enzymes by DNA-guided scaffold system and respiration chain engineering for improved N-acetylglucosamine production by Bacillus subtilis
-
Liu, Y., Zhu, Y., Ma, W., Shin, H.D., and Li, J. (2017c) Spatial modulation of key pathway enzymes by DNA-guided scaffold system and respiration chain engineering for improved N-acetylglucosamine production by Bacillus subtilis. Metab Eng 24: 61–69.
-
(2017)
Metab Eng
, vol.24
, pp. 61-69
-
-
Liu, Y.1
Zhu, Y.2
Ma, W.3
Shin, H.D.4
Li, J.5
-
130
-
-
84937630490
-
Pseudomonas putida—a versatile host for the production of natural products
-
Loeschcke, A., and Thies, S. (2015) Pseudomonas putida—a versatile host for the production of natural products. Appl Microb Biotechnol 99: 6197–6214.
-
(2015)
Appl Microb Biotechnol
, vol.99
, pp. 6197-6214
-
-
Loeschcke, A.1
Thies, S.2
-
131
-
-
84875605441
-
TREX: A universal tool for the transfer and expression of biosynthetic pathways in bacteria
-
Loeschcke, A., Markert, A., Wilhelm, S., Wirtz, A., Rosenau, F., Jaeger, K.E., and Drepper, T. (2013) TREX: A universal tool for the transfer and expression of biosynthetic pathways in bacteria. ACS Synth Biol 2: 22–33.
-
(2013)
ACS Synth Biol
, vol.2
, pp. 22-33
-
-
Loeschcke, A.1
Markert, A.2
Wilhelm, S.3
Wirtz, A.4
Rosenau, F.5
Jaeger, K.E.6
Drepper, T.7
-
133
-
-
84934300609
-
Chemical reactivity drives spatiotemporal organisation of bacterial metabolism
-
de Lorenzo, V., Sekowska, A., and Danchin, A. (2015) Chemical reactivity drives spatiotemporal organisation of bacterial metabolism. FEMS Microbiol Rev 39: 96–119.
-
(2015)
FEMS Microbiol Rev
, vol.39
, pp. 96-119
-
-
de Lorenzo, V.1
Sekowska, A.2
Danchin, A.3
-
134
-
-
80555123167
-
Optimization of a heterologous mevalonate pathway through the use of variant HMG-CoA reductases
-
Ma, S.M., García, D.E., Redding-Johanson, A.M., Friedland, G.D., Chan, R., Batth, T.S., et al. (2011) Optimization of a heterologous mevalonate pathway through the use of variant HMG-CoA reductases. Metab Eng 13: 588–597.
-
(2011)
Metab Eng
, vol.13
, pp. 588-597
-
-
Ma, S.M.1
García, D.E.2
Redding-Johanson, A.M.3
Friedland, G.D.4
Chan, R.5
Batth, T.S.6
-
135
-
-
84997684036
-
Draft genome sequence of the fast-growing bacterium Vibrio natriegens strain DSMZ 759
-
Maida, I., Bosi, E., Perrin, E., Papaleo, M.C., Orlandini, V., Fondi, M., et al. (2013) Draft genome sequence of the fast-growing bacterium Vibrio natriegens strain DSMZ 759. Genome Announc 1: e00648–13.
-
(2013)
Genome Announc
, vol.1
, pp. e00648-e00613
-
-
Maida, I.1
Bosi, E.2
Perrin, E.3
Papaleo, M.C.4
Orlandini, V.5
Fondi, M.6
-
136
-
-
84873938424
-
Improved production of secreted heterologous enzyme in Bacillus subtilis strain MGB874 via modification of glutamate metabolism and growth conditions
-
Manabe, K., Kageyama, Y., Morimoto, T., Shimizu, E., Takahashi, H., Kanaya, S., et al. (2013) Improved production of secreted heterologous enzyme in Bacillus subtilis strain MGB874 via modification of glutamate metabolism and growth conditions. Microb Cell Fact 12: 18.
-
(2013)
Microb Cell Fact
, vol.12
, pp. 18
-
-
Manabe, K.1
Kageyama, Y.2
Morimoto, T.3
Shimizu, E.4
Takahashi, H.5
Kanaya, S.6
-
137
-
-
85006713589
-
Tunable recombinant protein expression in E. coli: promoter systems and genetic constraints
-
Marschall, L., Sagmeister, P., and Herwig, C. (2017) Tunable recombinant protein expression in E. coli: promoter systems and genetic constraints. Appl Microbiol Biotechnol 101: 501–512.
-
(2017)
Appl Microbiol Biotechnol
, vol.101
, pp. 501-512
-
-
Marschall, L.1
Sagmeister, P.2
Herwig, C.3
-
138
-
-
34447271979
-
Bacteria of the Roseobacter clade show potential for secondary metabolite production
-
Martens, T., Gram, L., Grossart, H.P., Kessler, D., Müller, R., Simon, M., et al. (2007) Bacteria of the Roseobacter clade show potential for secondary metabolite production. Microb Ecol 54: 31–42.
-
(2007)
Microb Ecol
, vol.54
, pp. 31-42
-
-
Martens, T.1
Gram, L.2
Grossart, H.P.3
Kessler, D.4
Müller, R.5
Simon, M.6
-
139
-
-
0038391517
-
Engineering a mevalonate pathway in Escherichia coli for production of terpenoids
-
Martin, V.J.J., Pitera, D.J., Withers, S.T., Newman, J.D., and Keasling, J.D. (2003) Engineering a mevalonate pathway in Escherichia coli for production of terpenoids. Nat Biotechnol 21: 796–802.
-
(2003)
Nat Biotechnol
, vol.21
, pp. 796-802
-
-
Martin, V.J.J.1
Pitera, D.J.2
Withers, S.T.3
Newman, J.D.4
Keasling, J.D.5
-
140
-
-
85011654981
-
Shikimic acid production in Escherichia coli: from classical metabolic engineering strategies to omics applied to improve its production
-
Martínez, J.A., Bolívar, F., and Escalante, A. (2015) Shikimic acid production in Escherichia coli: from classical metabolic engineering strategies to omics applied to improve its production. Front Bioeng Biotechnol 3: 145.
-
(2015)
Front Bioeng Biotechnol
, vol.3
, pp. 145
-
-
Martínez, J.A.1
Bolívar, F.2
Escalante, A.3
-
141
-
-
80053648189
-
Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multi-resistant antibiotic profile of Pseudomonas putida KT2440
-
Martínez-García, E., and de Lorenzo, V. (2011) Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multi-resistant antibiotic profile of Pseudomonas putida KT2440. Environ Microbiol 13: 2702–2716.
-
(2011)
Environ Microbiol
, vol.13
, pp. 2702-2716
-
-
Martínez-García, E.1
de Lorenzo, V.2
-
143
-
-
85025135321
-
Molecular tools and emerging strategies for deep genetic/genomic refactoring of Pseudomonas
-
Martínez-García, E., and de Lorenzo, V. (2017) Molecular tools and emerging strategies for deep genetic/genomic refactoring of Pseudomonas. Curr Opin Biotechnol 47: 120–132.
-
(2017)
Curr Opin Biotechnol
, vol.47
, pp. 120-132
-
-
Martínez-García, E.1
de Lorenzo, V.2
-
144
-
-
84946019816
-
New transposon tools tailored for metabolic engineering of Gram-negative microbial cell factories
-
Martínez-García, E., Aparicio, T., de Lorenzo, V., and Nikel, P.I. (2014a) New transposon tools tailored for metabolic engineering of Gram-negative microbial cell factories. Front Bioeng Biotechnol 2: 46.
-
(2014)
Front Bioeng Biotechnol
, vol.2
, pp. 46
-
-
Martínez-García, E.1
Aparicio, T.2
de Lorenzo, V.3
Nikel, P.I.4
-
145
-
-
84964313870
-
Pseudomonas 2.0: genetic upgrading of P. putida KT2440 as an enhanced host for heterologous gene expression
-
Martínez-García, E., Nikel, P.I., Aparicio, T., and de Lorenzo, V. (2014b) Pseudomonas 2.0: genetic upgrading of P. putida KT2440 as an enhanced host for heterologous gene expression. Microb Cell Fact 13: 159.
-
(2014)
Microb Cell Fact
, vol.13
, pp. 159
-
-
Martínez-García, E.1
Nikel, P.I.2
Aparicio, T.3
de Lorenzo, V.4
-
146
-
-
84891631101
-
The metabolic cost of flagellar motion in Pseudomonas putida KT2440
-
Martínez-García, E., Nikel, P.I., Chavarría, M., and de Lorenzo, V. (2014c) The metabolic cost of flagellar motion in Pseudomonas putida KT2440. Environ Microbiol 16: 291–303.
-
(2014)
Environ Microbiol
, vol.16
, pp. 291-303
-
-
Martínez-García, E.1
Nikel, P.I.2
Chavarría, M.3
de Lorenzo, V.4
-
147
-
-
84941112071
-
SEVA 2.0: an update of the Standard European Vector Architecture for de-/re-construction of bacterial functionalities
-
Martínez-García, E., Aparicio, T., Goñi-Moreno, A., Fraile, S., and de Lorenzo, V. (2015) SEVA 2.0: an update of the Standard European Vector Architecture for de-/re-construction of bacterial functionalities. Nucleic Acids Res 43: D1183–D1189.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. D1183-D1189
-
-
Martínez-García, E.1
Aparicio, T.2
Goñi-Moreno, A.3
Fraile, S.4
de Lorenzo, V.5
-
148
-
-
10044292705
-
Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440
-
Martins dos Santos, V.A.P., Heim, S., Moore, E.R.B., Strätz, M., and Timmis, K.N. (2004) Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440. Environ Microbiol 6: 1264–1286.
-
(2004)
Environ Microbiol
, vol.6
, pp. 1264-1286
-
-
Martins dos Santos, V.A.P.1
Heim, S.2
Moore, E.R.B.3
Strätz, M.4
Timmis, K.N.5
-
149
-
-
0000452467
-
5′-Nucleotidase activity in improved inosine-producing mutants of Bacillus subtilis
-
Matsui, H., Sato, K., Enei, H., and Takinami, K. (1982) 5′-Nucleotidase activity in improved inosine-producing mutants of Bacillus subtilis. Agricult Biol Chem 46: 2347–2352.
-
(1982)
Agricult Biol Chem
, vol.46
, pp. 2347-2352
-
-
Matsui, H.1
Sato, K.2
Enei, H.3
Takinami, K.4
-
150
-
-
85019419661
-
Engineering metabolic pathways in Escherichia coli for constructing a “microbial chassis” for biochemical production
-
Matsumoto, T., Tanaka, T., and Kondo, A. (2017) Engineering metabolic pathways in Escherichia coli for constructing a “microbial chassis” for biochemical production. Biores Technol 245: 1362–1368.
-
(2017)
Biores Technol
, vol.245
, pp. 1362-1368
-
-
Matsumoto, T.1
Tanaka, T.2
Kondo, A.3
-
151
-
-
84879002382
-
Basic and applied uses of genome-scale metabolic network reconstructions of Escherichia coli
-
McCloskey, D., Palsson, B.Ø., and Feist, A.M. (2013) Basic and applied uses of genome-scale metabolic network reconstructions of Escherichia coli. Mol Syst Biol 9: 661.
-
(2013)
Mol Syst Biol
, vol.9
, pp. 661
-
-
McCloskey, D.1
Palsson, B.Ø.2
Feist, A.M.3
-
152
-
-
33746191929
-
The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse
-
McLeod, M.P., Warren, R.L., Hsiao, W.W., Araki, N., Myhre, M., Fernandes, C., et al. (2006) The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. Proc Natl Acad Sci USA 103: 15582–15587.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 15582-15587
-
-
McLeod, M.P.1
Warren, R.L.2
Hsiao, W.W.3
Araki, N.4
Myhre, M.5
Fernandes, C.6
-
153
-
-
84924029106
-
De novo production of the monoterpenoid geranic acid by metabolically engineered Pseudomonas putida
-
Mi, J., Becher, D., Lubuta, P., Dany, S., Tusch, K., Schewe, H., et al. (2014) De novo production of the monoterpenoid geranic acid by metabolically engineered Pseudomonas putida. Microb Cell Fact 13: 170.
-
(2014)
Microb Cell Fact
, vol.13
, pp. 170
-
-
Mi, J.1
Becher, D.2
Lubuta, P.3
Dany, S.4
Tusch, K.5
Schewe, H.6
-
154
-
-
0030593468
-
Over-production of proteins in Escherichia coli: mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels
-
Miroux, B., and Walker, J.E. (1996) Over-production of proteins in Escherichia coli: mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels. J Mol Biol 260: 289–298.
-
(1996)
J Mol Biol
, vol.260
, pp. 289-298
-
-
Miroux, B.1
Walker, J.E.2
-
155
-
-
85041010866
-
Rapid conjugative mobilization of a 100 kb segment of Bacillus subtilis chromosomal DNA is mediated by a helper plasmid with no ability for self-transfer
-
Miyano, M., Tanaka, K., Ishikawa, S., Takenaka, S., Arribas, A.M., Meijer, W.J.J., and Yoshida, K. (2018) Rapid conjugative mobilization of a 100 kb segment of Bacillus subtilis chromosomal DNA is mediated by a helper plasmid with no ability for self-transfer. Microb Cell Fact 17: 13.
-
(2018)
Microb Cell Fact
, vol.17
, pp. 13
-
-
Miyano, M.1
Tanaka, K.2
Ishikawa, S.3
Takenaka, S.4
Arribas, A.M.5
Meijer, W.J.J.6
Yoshida, K.7
-
156
-
-
34247146901
-
Escherichia coli minimum genome factory
-
Mizoguchi, H., Mori, H., and Fujio, T. (2007) Escherichia coli minimum genome factory. Biotechnol Appl Biochem 46: 157–167.
-
(2007)
Biotechnol Appl Biochem
, vol.46
, pp. 157-167
-
-
Mizoguchi, H.1
Mori, H.2
Fujio, T.3
-
157
-
-
85034224340
-
Generation of a platform strain for ionic liquid tolerance using adaptive laboratory evolution
-
Mohamed, E.T., Wang, S., Lennen, R.M., Herrgård, M.J., Simmons, B.A., Singer, S.W., and Feist, A.M. (2017) Generation of a platform strain for ionic liquid tolerance using adaptive laboratory evolution. Microb Cell Fact 16: 204.
-
(2017)
Microb Cell Fact
, vol.16
, pp. 204
-
-
Mohamed, E.T.1
Wang, S.2
Lennen, R.M.3
Herrgård, M.J.4
Simmons, B.A.5
Singer, S.W.6
Feist, A.M.7
-
158
-
-
48049110998
-
Enhanced recombinant protein productivity by genome reduction in Bacillus subtilis
-
Morimoto, T., Kadoya, R., Endo, K., Tohata, M., Sawada, K., Liu, S., et al. (2008) Enhanced recombinant protein productivity by genome reduction in Bacillus subtilis. DNA Res 15: 73–81.
-
(2008)
DNA Res
, vol.15
, pp. 73-81
-
-
Morimoto, T.1
Kadoya, R.2
Endo, K.3
Tohata, M.4
Sawada, K.5
Liu, S.6
-
159
-
-
76849089864
-
Increasing diterpene yield with a modular metabolic engineering system in E. coli: comparison of MEV and MEP isoprenoid precursor pathway engineering
-
Morrone, D., Lowry, L., Determan, M.K., Hershey, D.M., Xu, M., and Peters, R.J. (2010) Increasing diterpene yield with a modular metabolic engineering system in E. coli: comparison of MEV and MEP isoprenoid precursor pathway engineering. Appl Microbiol Biotechnol 85: 1893–1906.
-
(2010)
Appl Microbiol Biotechnol
, vol.85
, pp. 1893-1906
-
-
Morrone, D.1
Lowry, L.2
Determan, M.K.3
Hershey, D.M.4
Xu, M.5
Peters, R.J.6
-
160
-
-
85008192136
-
Increased production of L-serine in Escherichia coli through adaptive laboratory evolution
-
Mundhada, H., Seoane, J.M., Schneider, K., Koza, A., Christensen, H.B., Klein, T., et al. (2017) Increased production of L-serine in Escherichia coli through adaptive laboratory evolution. Metab Eng 39: 141–150.
-
(2017)
Metab Eng
, vol.39
, pp. 141-150
-
-
Mundhada, H.1
Seoane, J.M.2
Schneider, K.3
Koza, A.4
Christensen, H.B.5
Klein, T.6
-
161
-
-
0036933705
-
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
-
Nelson, K.E., Weinel, C., Paulsen, I.T., Dodson, R.J., Hilbert, H., Martins dos Santos, V.A.P., et al. (2002) Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environ Microbiol 4: 799–808.
-
(2002)
Environ Microbiol
, vol.4
, pp. 799-808
-
-
Nelson, K.E.1
Weinel, C.2
Paulsen, I.T.3
Dodson, R.J.4
Hilbert, H.5
Martins dos Santos, V.A.P.6
-
162
-
-
67349164687
-
Recent progress on industrial fermentative production of acetone-butanol-ethanol by Clostridium acetobutylicum in China
-
Ni, Y., and Sun, Z. (2009) Recent progress on industrial fermentative production of acetone-butanol-ethanol by Clostridium acetobutylicum in China. Appl Microbiol Biotechnol 83: 415–423.
-
(2009)
Appl Microbiol Biotechnol
, vol.83
, pp. 415-423
-
-
Ni, Y.1
Sun, Z.2
-
163
-
-
77953022341
-
A comparative view of metabolite and substrate stress and tolerance in microbial bioprocessing: from biofuels and chemicals, to biocatalysis and bioremediation
-
Nicolaou, S.A., Gaida, S.M., and Papoutsakis, E.T. (2010) A comparative view of metabolite and substrate stress and tolerance in microbial bioprocessing: from biofuels and chemicals, to biocatalysis and bioremediation. Metab Eng 12: 307–331.
-
(2010)
Metab Eng
, vol.12
, pp. 307-331
-
-
Nicolaou, S.A.1
Gaida, S.M.2
Papoutsakis, E.T.3
-
164
-
-
84960460639
-
Engineering cellular metabolism
-
Nielsen, J., and Keasling, J.D. (2016) Engineering cellular metabolism. Cell 164: 1185–1197.
-
(2016)
Cell
, vol.164
, pp. 1185-1197
-
-
Nielsen, J.1
Keasling, J.D.2
-
165
-
-
29144484252
-
The solvent-tolerant Pseudomonas putida S12 as host for the production of cinnamic acid from glucose
-
Nijkamp, K., van Luijk, N., de Bont, J.A.M., and Wery, J. (2005) The solvent-tolerant Pseudomonas putida S12 as host for the production of cinnamic acid from glucose. Appl Microbiol Biotechnol 69: 170–177.
-
(2005)
Appl Microbiol Biotechnol
, vol.69
, pp. 170-177
-
-
Nijkamp, K.1
van Luijk, N.2
de Bont, J.A.M.3
Wery, J.4
-
166
-
-
84871436225
-
Engineering an anaerobic metabolic regime in Pseudomonas putida KT2440 for the anoxic biodegradation of 1,3-dichloroprop-1-ene
-
Nikel, P.I., and de Lorenzo, V. (2013) Engineering an anaerobic metabolic regime in Pseudomonas putida KT2440 for the anoxic biodegradation of 1,3-dichloroprop-1-ene. Metab Eng 15: 98–112.
-
(2013)
Metab Eng
, vol.15
, pp. 98-112
-
-
Nikel, P.I.1
de Lorenzo, V.2
-
167
-
-
85047192966
-
Pseudomonas putida as a functional chassis for industrial biocatalysis: from native biochemistry to trans-metabolism
-
In press.
-
Nikel, P.I., and de Lorenzo, V. (2018) Pseudomonas putida as a functional chassis for industrial biocatalysis: from native biochemistry to trans-metabolism. Metab Eng In press. https://doi.org/10.1016/j.ymben.2018.1005.1005.
-
(2018)
Metab Eng
-
-
Nikel, P.I.1
de Lorenzo, V.2
-
168
-
-
84891635026
-
Metabolic and regulatory rearrangements underlying glycerol metabolism in Pseudomonas putida KT2440
-
Nikel, P.I., Kim, J., and de Lorenzo, V. (2014a) Metabolic and regulatory rearrangements underlying glycerol metabolism in Pseudomonas putida KT2440. Environ Microbiol 16: 239–254.
-
(2014)
Environ Microbiol
, vol.16
, pp. 239-254
-
-
Nikel, P.I.1
Kim, J.2
de Lorenzo, V.3
-
169
-
-
84898874640
-
Biotechnological domestication of pseudomonads using synthetic biology
-
Nikel, P.I., Martínez-García, E., and de Lorenzo, V. (2014b) Biotechnological domestication of pseudomonads using synthetic biology. Nat Rev Microbiol 12: 368–379.
-
(2014)
Nat Rev Microbiol
, vol.12
, pp. 368-379
-
-
Nikel, P.I.1
Martínez-García, E.2
de Lorenzo, V.3
-
170
-
-
84944910018
-
Pseudomonas putida KT2440 strain metabolizes glucose through a cycle formed by enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and pentose phosphate pathways
-
Nikel, P.I., Chavarría, M., Fuhrer, T., Sauer, U., and de Lorenzo, V. (2015a) Pseudomonas putida KT2440 strain metabolizes glucose through a cycle formed by enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and pentose phosphate pathways. J Biol Chem 290: 25920–25932.
-
(2015)
J Biol Chem
, vol.290
, pp. 25920-25932
-
-
Nikel, P.I.1
Chavarría, M.2
Fuhrer, T.3
Sauer, U.4
de Lorenzo, V.5
-
171
-
-
84928793736
-
The glycerol-dependent metabolic persistence of Pseudomonas putida KT2440 reflects the regulatory logic of the GlpR repressor
-
Nikel, P.I., Romero-Campero, F.J., Zeidman, J.A., Goñi-Moreno, A. and de Lorenzo, V. (2015b) The glycerol-dependent metabolic persistence of Pseudomonas putida KT2440 reflects the regulatory logic of the GlpR repressor. mBio 6, e00340-15.
-
(2015)
mBio
, vol.6
-
-
Nikel, P.I.1
Romero-Campero, F.J.2
Zeidman, J.A.3
Goñi-Moreno, A.4
de Lorenzo, V.5
-
172
-
-
84969963522
-
From dirt to industrial applications: Pseudomonas putida as a synthetic biology chassis for hosting harsh biochemical reactions
-
Nikel, P.I., Chavarría, M., Danchin, A., and de Lorenzo, V. (2016) From dirt to industrial applications: Pseudomonas putida as a synthetic biology chassis for hosting harsh biochemical reactions. Curr Opin Chem Biol 34: 20–29.
-
(2016)
Curr Opin Chem Biol
, vol.34
, pp. 20-29
-
-
Nikel, P.I.1
Chavarría, M.2
Danchin, A.3
de Lorenzo, V.4
-
173
-
-
84949661523
-
Metabolic design of a platform Escherichia coli strain producing various chorismate derivatives
-
Noda, S., Shirai, T., Oyama, S., and Kondo, A. (2016) Metabolic design of a platform Escherichia coli strain producing various chorismate derivatives. Metab Eng 33: 119–129.
-
(2016)
Metab Eng
, vol.33
, pp. 119-129
-
-
Noda, S.1
Shirai, T.2
Oyama, S.3
Kondo, A.4
-
174
-
-
54449092307
-
A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory
-
Nogales, J., Palsson, B.Ø., and Thiele, I. (2008) A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory. BMC Syst Biol 2: 79.
-
(2008)
BMC Syst Biol
, vol.2
, pp. 79
-
-
Nogales, J.1
Palsson, B.Ø.2
Thiele, I.3
-
175
-
-
84857137366
-
Detailing the optimality of photosynthesis in cyanobacteria through systems biology analysis
-
Nogales, J., Gudmundsson, S., Knight, E.M., Palsson, B.Ø., and Thiele, I. (2012) Detailing the optimality of photosynthesis in cyanobacteria through systems biology analysis. Proc Natl Acad Sci USA 109: 2678–2683.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 2678-2683
-
-
Nogales, J.1
Gudmundsson, S.2
Knight, E.M.3
Palsson, B.Ø.4
Thiele, I.5
-
176
-
-
85048505342
-
Expanding the computable reactome in Pseudomonas putida reveals metabolic cycles providing robustness
-
In press.
-
Nogales, J., Gudmundsson, S., Duque, E., Ramos, J.L. and Palsson, B.Ø. (2017) Expanding the computable reactome in Pseudomonas putida reveals metabolic cycles providing robustness. bioRxiv, In press. https://doi.org/10.1101/139121
-
(2017)
bioRxiv
-
-
Nogales, J.1
Gudmundsson, S.2
Duque, E.3
Ramos, J.L.4
Palsson, B.Ø.5
-
177
-
-
0033068938
-
Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited Escherichia coli populations
-
Notley-McRobb, L., and Ferenci, T. (1999) Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited Escherichia coli populations. Environ Microbiol 1: 33–43.
-
(1999)
Environ Microbiol
, vol.1
, pp. 33-43
-
-
Notley-McRobb, L.1
Ferenci, T.2
-
178
-
-
84901830842
-
Cyanobacteria as a platform for biofuel production
-
Nozzi, N.E., Oliver, J.W.K., and Atsumi, S. (2013) Cyanobacteria as a platform for biofuel production. Front Bioeng Biotechnol 1: 7.
-
(2013)
Front Bioeng Biotechnol
, vol.1
, pp. 7
-
-
Nozzi, N.E.1
Oliver, J.W.K.2
Atsumi, S.3
-
179
-
-
84930227327
-
Using genome-scale models to predict biological capabilities
-
O'Brien, E.J., Monk, J.M., and Palsson, B.Ø. (2015) Using genome-scale models to predict biological capabilities. Cell 161: 971–987.
-
(2015)
Cell
, vol.161
, pp. 971-987
-
-
O'Brien, E.J.1
Monk, J.M.2
Palsson, B.Ø.3
-
180
-
-
35348934254
-
Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data
-
Oh, Y.K., Palsson, B.Ø., Park, S.M., Schilling, C.H., and Mahadevan, R. (2007) Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data. J Biol Chem 282: 28791–28799.
-
(2007)
J Biol Chem
, vol.282
, pp. 28791-28799
-
-
Oh, Y.K.1
Palsson, B.Ø.2
Park, S.M.3
Schilling, C.H.4
Mahadevan, R.5
-
181
-
-
80054069179
-
A comprehensive genome-scale reconstruction of Escherichia coli metabolism—2011
-
Orth, J.D., Conrad, T.M., Na, J., Lerman, J.A., Nam, H., Feist, A.M., and Palsson, B.Ø. (2011) A comprehensive genome-scale reconstruction of Escherichia coli metabolism—2011. Mol Syst Biol 7: 535.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 535
-
-
Orth, J.D.1
Conrad, T.M.2
Na, J.3
Lerman, J.A.4
Nam, H.5
Feist, A.M.6
Palsson, B.Ø.7
-
182
-
-
33947491586
-
Construction of pha-operon-defined knockout mutants of Pseudomonas putida KT2442 and their applications in poly(hydroxyalkanoate) production
-
Ouyang, S.P., Liu, Q., Fang, L., and Chen, G.Q. (2007) Construction of pha-operon-defined knockout mutants of Pseudomonas putida KT2442 and their applications in poly(hydroxyalkanoate) production. Macromol Biosci 7: 227–233.
-
(2007)
Macromol Biosci
, vol.7
, pp. 227-233
-
-
Ouyang, S.P.1
Liu, Q.2
Fang, L.3
Chen, G.Q.4
-
183
-
-
84954290166
-
Fed-batch biomolecule production by Bacillus subtilis: a state of the art review
-
Oztürk, S., Calik, P. and Ozdamar, T.H. (2016) Fed-batch biomolecule production by Bacillus subtilis: a state of the art review. Trends Biotechnol 34, 329–345.
-
(2016)
Trends Biotechnol
, vol.34
, pp. 329-345
-
-
Oztürk, S.1
Calik, P.2
Ozdamar, T.H.3
-
184
-
-
85045398497
-
Omics and multi-omics approaches to study the biosynthesis of secondary metabolites in microorganisms
-
Palazzotto, E., and Weber, T. (2018) Omics and multi-omics approaches to study the biosynthesis of secondary metabolites in microorganisms. Curr Opin Microbiol 45: 109–116.
-
(2018)
Curr Opin Microbiol
, vol.45
, pp. 109-116
-
-
Palazzotto, E.1
Weber, T.2
-
185
-
-
85020003398
-
Redesigning metabolism based on orthogonality principles
-
Pandit, A.V., Srinivasan, S., and Mahadevan, R. (2017) Redesigning metabolism based on orthogonality principles. Nat Commun 8: 1–11.
-
(2017)
Nat Commun
, vol.8
, pp. 1-11
-
-
Pandit, A.V.1
Srinivasan, S.2
Mahadevan, R.3
-
186
-
-
71549122280
-
PutidaNET: interactome database service and network analysis of Pseudomonas putida KT2440
-
Park, S.J., Choi, J.S., Kim, B.C., Jho, S.W., Ryu, J.W., Park, D., et al. (2009) PutidaNET: interactome database service and network analysis of Pseudomonas putida KT2440. BMC Genom 10: S18.
-
(2009)
BMC Genom
, vol.10
, pp. S18
-
-
Park, S.J.1
Choi, J.S.2
Kim, B.C.3
Jho, S.W.4
Ryu, J.W.5
Park, D.6
-
187
-
-
84905054602
-
Enhancing recombinant protein production with an Escherichia coli host strain lacking insertion sequences
-
Park, M.K., Lee, S.H., Yang, K.S., Jung, S.C., Lee, J.H., and Kim, S.C. (2014) Enhancing recombinant protein production with an Escherichia coli host strain lacking insertion sequences. Appl Microbiol Biotechnol 98: 6701–6713.
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 6701-6713
-
-
Park, M.K.1
Lee, S.H.2
Yang, K.S.3
Jung, S.C.4
Lee, J.H.5
Kim, S.C.6
-
188
-
-
51249195920
-
Some observations on the physiology of Pseudomonas natriegens nov. spec
-
Payne, W.J., Eagon, R.G., and Williams, A.K. (1961) Some observations on the physiology of Pseudomonas natriegens nov. spec. Antonie van Leeuwenhoek 27: 121–128.
-
(1961)
Antonie van Leeuwenhoek
, vol.27
, pp. 121-128
-
-
Payne, W.J.1
Eagon, R.G.2
Williams, A.K.3
-
189
-
-
50549090249
-
Targeted development of registries of biological parts
-
Peccoud, J., Blauvelt, M.F., Cai, Y., Cooper, K.L., Crasta, O., DeLalla, E.C., et al. (2008) Targeted development of registries of biological parts. PLoS ONE 3: e2671.
-
(2008)
PLoS ONE
, vol.3
-
-
Peccoud, J.1
Blauvelt, M.F.2
Cai, Y.3
Cooper, K.L.4
Crasta, O.5
DeLalla, E.C.6
-
190
-
-
84884653783
-
Endogenous stress caused by faulty oxidation reactions fosters evolution of 2,4-dinitrotoluene-degrading bacteria
-
Pérez-Pantoja, D., Nikel, P.I., Chavarría, M., and de Lorenzo, V. (2013) Endogenous stress caused by faulty oxidation reactions fosters evolution of 2,4-dinitrotoluene-degrading bacteria. PLoS Genet 9: e1003764.
-
(2013)
PLoS Genet
, vol.9
-
-
Pérez-Pantoja, D.1
Nikel, P.I.2
Chavarría, M.3
de Lorenzo, V.4
-
191
-
-
84862292281
-
Industrial biotechnology of Pseudomonas putida and related species
-
Poblete-Castro, I., Becker, J., Dohnt, K., Martins dos Santos, V.A.P., and Wittmann, C. (2012) Industrial biotechnology of Pseudomonas putida and related species. Appl Microbiol Biotechnol 93: 2279–2290.
-
(2012)
Appl Microbiol Biotechnol
, vol.93
, pp. 2279-2290
-
-
Poblete-Castro, I.1
Becker, J.2
Dohnt, K.3
Martins dos Santos, V.A.P.4
Wittmann, C.5
-
192
-
-
85032303192
-
Host organism: Pseudomonas putida
-
Wittmann, C., Liao, J.C., (eds)., Weinheim, Wiley-VCH Verlag GmbH & Co. KGaA
-
Poblete-Castro, I., Borrero de Acuña, J.M., Nikel, P.I., Kohlstedt, M., and Wittmann, C. (2017) Host organism: Pseudomonas putida. In Industrial Biotechnology: Microorganisms. Wittmann, C., and Liao, J.C. (eds). Weinheim: Wiley-VCH Verlag GmbH & Co. KGaA.
-
(2017)
Industrial Biotechnology: Microorganisms
-
-
Poblete-Castro, I.1
Borrero de Acuña, J.M.2
Nikel, P.I.3
Kohlstedt, M.4
Wittmann, C.5
-
193
-
-
85046649083
-
Escherichia coli as a host for metabolic engineering
-
In press.
-
Pontrelli, S., Chiu, T.Y., Lan, E.I., Chen, F.Y., Chang, P. and Liao, J.C. (2018) Escherichia coli as a host for metabolic engineering. Metab Eng, In press. https://doi.org/10.1016/j.ymben.2018.1004.1008
-
(2018)
Metab Eng
-
-
Pontrelli, S.1
Chiu, T.Y.2
Lan, E.I.3
Chen, F.Y.4
Chang, P.5
Liao, J.C.6
-
194
-
-
33646722147
-
Emergent properties of reduced-genome Escherichia coli
-
Pósfai, G., Plunkett, G., Fehér, T., Frisch, D., Keil, G.M., Umenhoffer, K., et al. (2006) Emergent properties of reduced-genome Escherichia coli. Science 312: 1044–1046.
-
(2006)
Science
, vol.312
, pp. 1044-1046
-
-
Pósfai, G.1
Plunkett, G.2
Fehér, T.3
Frisch, D.4
Keil, G.M.5
Umenhoffer, K.6
-
195
-
-
85047501751
-
Mutant phenotypes for thousands of bacterial genes of unknown function
-
Price, M.N., Wetmore, K.M., Waters, R.J., Callaghan, M., Ray, J., Liu, H., et al. (2018) Mutant phenotypes for thousands of bacterial genes of unknown function. Nature 557: 503–509.
-
(2018)
Nature
, vol.557
, pp. 503-509
-
-
Price, M.N.1
Wetmore, K.M.2
Waters, R.J.3
Callaghan, M.4
Ray, J.5
Liu, H.6
-
196
-
-
84959267546
-
A holistic view of polyhydroxyalkanoate metabolism in Pseudomonas putida
-
Prieto, A., Escapa, I.F., Martínez, V., Dinjaski, N., Herencias, C., de la Peña, F., et al. (2016) A holistic view of polyhydroxyalkanoate metabolism in Pseudomonas putida. Environ Microbiol 18: 341–357.
-
(2016)
Environ Microbiol
, vol.18
, pp. 341-357
-
-
Prieto, A.1
Escapa, I.F.2
Martínez, V.3
Dinjaski, N.4
Herencias, C.5
de la Peña, F.6
-
197
-
-
55449096123
-
Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology
-
Puchałka, J., Oberhardt, M.A., Godinho, M., Bielecka, A., Regenhardt, D., Timmis, K.N., et al. (2008) Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology. PLoS Comput Biol 4, e1000210.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Puchałka, J.1
Oberhardt, M.A.2
Godinho, M.3
Bielecka, A.4
Regenhardt, D.5
Timmis, K.N.6
-
198
-
-
84874687019
-
Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
-
Qi, L.S., Larson, M.H., Gilbert, L.A., Doudna, J.A., Weissman, J.S., Arkin, A.P., and Lim, W.A. (2013) Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell 152: 1173–1183.
-
(2013)
Cell
, vol.152
, pp. 1173-1183
-
-
Qi, L.S.1
Larson, M.H.2
Gilbert, L.A.3
Doudna, J.A.4
Weissman, J.S.5
Arkin, A.P.6
Lim, W.A.7
-
199
-
-
84900453510
-
Lignin valorization: improving lignin processing in the biorefinery
-
Ragauskas, A.J., Beckham, G.T., Biddy, M.J., Chandra, R., Chen, F., Davis, M.F., et al. (2014) Lignin valorization: improving lignin processing in the biorefinery. Science 344: 1246843.
-
(2014)
Science
, vol.344
, pp. 1246843
-
-
Ragauskas, A.J.1
Beckham, G.T.2
Biddy, M.J.3
Chandra, R.4
Chen, F.5
Davis, M.F.6
-
200
-
-
0036405482
-
Mechanisms of solvent tolerance in Gram-negative bacteria
-
Ramos, J.L., Duque, E., Gallegos, M.T., Godoy, P., Ramos-González, M.I., Rojas, A., et al. (2002) Mechanisms of solvent tolerance in Gram-negative bacteria. Annu Rev Microbiol 56: 743–768.
-
(2002)
Annu Rev Microbiol
, vol.56
, pp. 743-768
-
-
Ramos, J.L.1
Duque, E.2
Gallegos, M.T.3
Godoy, P.4
Ramos-González, M.I.5
Rojas, A.6
-
201
-
-
85015209095
-
Conversion of lignin model compounds by Pseudomonas putida KT2440 and isolates from compost
-
Ravi, K., García-Hidalgo, J., Gorwa-Grauslund, M.F., and Lidén, G. (2017) Conversion of lignin model compounds by Pseudomonas putida KT2440 and isolates from compost. Appl Microbiol Biotechnol 101: 5059–5070.
-
(2017)
Appl Microbiol Biotechnol
, vol.101
, pp. 5059-5070
-
-
Ravi, K.1
García-Hidalgo, J.2
Gorwa-Grauslund, M.F.3
Lidén, G.4
-
202
-
-
0019800517
-
Bacterial production of human insulin
-
Riggs, A.D. (1981) Bacterial production of human insulin. Diabetes Care 4: 64–68.
-
(1981)
Diabetes Care
, vol.4
, pp. 64-68
-
-
Riggs, A.D.1
-
203
-
-
84903366227
-
BioBrick assembly standards and techniques and associated software tools
-
Røkke, G., Korvald, E., Pahr, J., Oyås, O., and Lale, R. (2014) BioBrick assembly standards and techniques and associated software tools. Methods Mol Biol 1116: 1–24.
-
(2014)
Methods Mol Biol
, vol.1116
, pp. 1-24
-
-
Røkke, G.1
Korvald, E.2
Pahr, J.3
Oyås, O.4
Lale, R.5
-
204
-
-
84899679316
-
Recombinant protein expression in Escherichia coli: advances and challenges
-
Rosano, G.L., and Ceccarelli, E.A. (2014) Recombinant protein expression in Escherichia coli: advances and challenges. Front Microbiol 5: 172.
-
(2014)
Front Microbiol
, vol.5
, pp. 172
-
-
Rosano, G.L.1
Ceccarelli, E.A.2
-
205
-
-
84962214013
-
Analysis and optimization of triacylglycerol synthesis in novel oleaginous Rhodococcus and Streptomyces strains isolated from desert soil
-
Röttig, A., Hauschild, P., Madkour, M.H., Al-Ansari, A.M., Almakishah, N.H., and Steinbüchel, A. (2016) Analysis and optimization of triacylglycerol synthesis in novel oleaginous Rhodococcus and Streptomyces strains isolated from desert soil. J Biotechnol 225: 48–56.
-
(2016)
J Biotechnol
, vol.225
, pp. 48-56
-
-
Röttig, A.1
Hauschild, P.2
Madkour, M.H.3
Al-Ansari, A.M.4
Almakishah, N.H.5
Steinbüchel, A.6
-
206
-
-
84995469314
-
Genetic tools for advancement of Synechococcus sp. PCC 7002 as a cyanobacterial chassis
-
Ruffing, A.M., Jensen, T.J. and Strickland, L.M. (2016) Genetic tools for advancement of Synechococcus sp. PCC 7002 as a cyanobacterial chassis. Microb Cell Fact 15, 1–14.
-
(2016)
Microb Cell Fact
, vol.15
, pp. 1-14
-
-
Ruffing, A.M.1
Jensen, T.J.2
Strickland, L.M.3
-
207
-
-
85042235346
-
Diverse genetic error modes constrain large-scale bio-based production
-
Rugbjerg, P., Myling-Petersen, N., Porse, A., Sarup-Lytzen, K., and Sommer, M.O.A. (2018) Diverse genetic error modes constrain large-scale bio-based production. Nat Commun 9: 787.
-
(2018)
Nat Commun
, vol.9
, pp. 787
-
-
Rugbjerg, P.1
Myling-Petersen, N.2
Porse, A.3
Sarup-Lytzen, K.4
Sommer, M.O.A.5
-
208
-
-
84900635627
-
Biosynthesis of 1,3-propanediol from recombinant E. coli by optimization process using pure and crude glycerol as a sole carbon source under two-phase fermentation system
-
Rujananon, R., Prasertsan, P., and Phongdara, A. (2014) Biosynthesis of 1,3-propanediol from recombinant E. coli by optimization process using pure and crude glycerol as a sole carbon source under two-phase fermentation system. World J Microbiol Biotechnol 30: 1359–1368.
-
(2014)
World J Microbiol Biotechnol
, vol.30
, pp. 1359-1368
-
-
Rujananon, R.1
Prasertsan, P.2
Phongdara, A.3
-
209
-
-
84954571280
-
Microbial cell factories for diol production
-
Sabra, W., Groeger, C., and Zeng, A.P. (2016) Microbial cell factories for diol production. Adv Biochem Eng Biotechnol 155: 165–197.
-
(2016)
Adv Biochem Eng Biotechnol
, vol.155
, pp. 165-197
-
-
Sabra, W.1
Groeger, C.2
Zeng, A.P.3
-
210
-
-
84896089904
-
Bioproduction of 4-vinylphenol from corn cob alkaline hydrolyzate in two-phase extractive fermentation using free or immobilized recombinant E. coli expressing pad gene
-
Salgado, J.M., Rodríguez-Solana, R., Curiel, J.A., de las Rivas, B., Muñoz, R. and Domínguez, J.M. (2014) Bioproduction of 4-vinylphenol from corn cob alkaline hydrolyzate in two-phase extractive fermentation using free or immobilized recombinant E. coli expressing pad gene. Enzyme Microb Technol 58-59: 2, 2–28.
-
(2014)
Enzyme Microb Technol 58-59:
, vol.2
, pp. 2-28
-
-
Salgado, J.M.1
Rodríguez-Solana, R.2
Curiel, J.A.3
de las Rivas, B.4
Muñoz, R.5
Domínguez, J.M.6
-
211
-
-
84864138931
-
Production and characterization of poly-β-hydroxybutyrate (PHB) polymer from Aulosira fertilissima
-
Samantaray, S. and Mallick, N. (2012) Production and characterization of poly-β-hydroxybutyrate (PHB) polymer from Aulosira fertilissima. J Appl Phycol 24, 803–814.
-
(2012)
J Appl Phycol
, vol.24
, pp. 803-814
-
-
Samantaray, S.1
Mallick, N.2
-
212
-
-
85019581632
-
Refactoring the Embden-Meyerhof-Parnas pathway as a whole of portable GlucoBricks for implantation of glycolytic modules in Gram-negative bacteria
-
Sánchez-Pascuala, A., de Lorenzo, V., and Nikel, P.I. (2017) Refactoring the Embden-Meyerhof-Parnas pathway as a whole of portable GlucoBricks for implantation of glycolytic modules in Gram-negative bacteria. ACS Synth Biol 6: 793–805.
-
(2017)
ACS Synth Biol
, vol.6
, pp. 793-805
-
-
Sánchez-Pascuala, A.1
de Lorenzo, V.2
Nikel, P.I.3
-
213
-
-
4444316792
-
Insights into Pseudomonas putida KT2440 response to phenol-induced stress by quantitative proteomics
-
Santos, P.M., Benndorf, D., and Sá-Correia, I. (2004) Insights into Pseudomonas putida KT2440 response to phenol-induced stress by quantitative proteomics. Proteomics 4: 2640–2652.
-
(2004)
Proteomics
, vol.4
, pp. 2640-2652
-
-
Santos, P.M.1
Benndorf, D.2
Sá-Correia, I.3
-
214
-
-
85038360975
-
Microbial synthesis of medium-chain chemicals from renewables
-
Sarria, S., Kruyer, N.S., and Peralta-Yahya, P. (2017) Microbial synthesis of medium-chain chemicals from renewables. Nat Biotechnol 35: 1158–1166.
-
(2017)
Nat Biotechnol
, vol.35
, pp. 1158-1166
-
-
Sarria, S.1
Kruyer, N.S.2
Peralta-Yahya, P.3
-
216
-
-
1942538348
-
Developments in the use of Bacillus species for industrial production
-
Schallmey, M., Singh, A., and Ward, O.P. (2004) Developments in the use of Bacillus species for industrial production. Can J Microbiol 50: 1–17.
-
(2004)
Can J Microbiol
, vol.50
, pp. 1-17
-
-
Schallmey, M.1
Singh, A.2
Ward, O.P.3
-
217
-
-
84930934882
-
Engineering mediator-based electroactivity in the obligate aerobic bacterium Pseudomonas putida KT2440
-
Schmitz, S., Nies, S., Wierckx, N., Blank, L.M., and Rosenbaum, M.A. (2015) Engineering mediator-based electroactivity in the obligate aerobic bacterium Pseudomonas putida KT2440. Front Microbiol 6: 284.
-
(2015)
Front Microbiol
, vol.6
, pp. 284
-
-
Schmitz, S.1
Nies, S.2
Wierckx, N.3
Blank, L.M.4
Rosenbaum, M.A.5
-
218
-
-
85045101963
-
Engineered promoters enable constant gene expression at any copy number in bacteria
-
Segall-Shapiro, T.H., Sontag, E.D., and Voigt, C.A. (2018) Engineered promoters enable constant gene expression at any copy number in bacteria. Nat Biotechnol 36: 352–358.
-
(2018)
Nat Biotechnol
, vol.36
, pp. 352-358
-
-
Segall-Shapiro, T.H.1
Sontag, E.D.2
Voigt, C.A.3
-
219
-
-
84946047532
-
Metabolic engineering of a novel muconic acid biosynthesis pathway via 4-hydroxybenzoic acid in Escherichia coli
-
Sengupta, S., Jonnalagadda, S., Goonewardena, L., and Juturu, V. (2015) Metabolic engineering of a novel muconic acid biosynthesis pathway via 4-hydroxybenzoic acid in Escherichia coli. Appl Environ Microbiol 81: 8037–8043.
-
(2015)
Appl Environ Microbiol
, vol.81
, pp. 8037-8043
-
-
Sengupta, S.1
Jonnalagadda, S.2
Goonewardena, L.3
Juturu, V.4
-
220
-
-
79955611425
-
Driving forces enable high-titer anaerobic 1-butanol synthesis in Escherichia coli
-
Shen, C.R., Lan, E.I., Dekishima, Y., Baez, A., Cho, K.M., and Liao, J.C. (2011) Driving forces enable high-titer anaerobic 1-butanol synthesis in Escherichia coli. Appl Environ Microbiol 77: 2905–2915.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 2905-2915
-
-
Shen, C.R.1
Lan, E.I.2
Dekishima, Y.3
Baez, A.4
Cho, K.M.5
Liao, J.C.6
-
221
-
-
85047438694
-
Selecting the best: evolutionary engineering of chemical production in microbes
-
Shepelin, D., Hansen, A.S.L., Lennen, R.M., Luo, H., and Herrgård, M.J. (2018) Selecting the best: evolutionary engineering of chemical production in microbes. Genes 9: 249.
-
(2018)
Genes
, vol.9
, pp. 249
-
-
Shepelin, D.1
Hansen, A.S.L.2
Lennen, R.M.3
Luo, H.4
Herrgård, M.J.5
-
222
-
-
84923933009
-
Deregulation of purine pathway in Bacillus subtilis and its use in riboflavin biosynthesis
-
Shi, T., Wang, Y., Wang, Z., Wang, G., Liu, D., Fu, J., et al. (2014) Deregulation of purine pathway in Bacillus subtilis and its use in riboflavin biosynthesis. Microb Cell Fact 13: 101.
-
(2014)
Microb Cell Fact
, vol.13
, pp. 101
-
-
Shi, T.1
Wang, Y.2
Wang, Z.3
Wang, G.4
Liu, D.5
Fu, J.6
-
223
-
-
0034946131
-
The production of poly(γ-glutamic acid) from microorganisms and its various applications
-
Shih, I.L., and Van, Y.T. (2001) The production of poly(γ-glutamic acid) from microorganisms and its various applications. Bioresour Technol 79: 207–225.
-
(2001)
Bioresour Technol
, vol.79
, pp. 207-225
-
-
Shih, I.L.1
Van, Y.T.2
-
224
-
-
19544381068
-
Growing E. coli to high cell density—A historical perspective on method development
-
Shiloach, J., and Fass, R. (2005) Growing E. coli to high cell density—A historical perspective on method development. Biotechnol Adv 23: 345–357.
-
(2005)
Biotechnol Adv
, vol.23
, pp. 345-357
-
-
Shiloach, J.1
Fass, R.2
-
225
-
-
84876567509
-
The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes
-
Silva-Rocha, R., Martínez-García, E., Calles, B., Chavarría, M., Arce-Rodríguez, A., de Las Heras, A., et al. (2013) The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes. Nucleic Acids Res 41: D666–D675.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D666-D675
-
-
Silva-Rocha, R.1
Martínez-García, E.2
Calles, B.3
Chavarría, M.4
Arce-Rodríguez, A.5
de Las Heras, A.6
-
226
-
-
85034831934
-
Advances in cyanobacterial polyhydroxyalkanoates production
-
Singh, A.K., and Mallick, N. (2018) Advances in cyanobacterial polyhydroxyalkanoates production. FEMS Microbiol Lett 364: 1–13.
-
(2018)
FEMS Microbiol Lett
, vol.364
, pp. 1-13
-
-
Singh, A.K.1
Mallick, N.2
-
227
-
-
85006197272
-
Microbial enzymes: industrial progress in 21st century. 3
-
Singh, R., Kumar, M., Mittal, A., and Kumar, P. (2016) Microbial enzymes: industrial progress in 21st century. 3. Biotech 6: 1–15.
-
(2016)
Biotech
, vol.6
, pp. 1-15
-
-
Singh, R.1
Kumar, M.2
Mittal, A.3
Kumar, P.4
-
228
-
-
84958247886
-
Synthetic biology to access and expand nature's chemical diversity
-
Smanski, M.J., Zhou, H., Claesen, J., Shen, B., Fischbach, M.A., and Voigt, C.A. (2016) Synthetic biology to access and expand nature's chemical diversity. Nat Rev Microbiol 14: 135–149.
-
(2016)
Nat Rev Microbiol
, vol.14
, pp. 135-149
-
-
Smanski, M.J.1
Zhou, H.2
Claesen, J.3
Shen, B.4
Fischbach, M.A.5
Voigt, C.A.6
-
229
-
-
77954714441
-
In silico genome-scale metabolic analysis of Pseudomonas putida KT2440 for polyhydroxyalkanoate synthesis, degradation of aromatics and anaerobic survival
-
Sohn, S.B., Kim, T.Y., Park, J.M., and Lee, S.Y. (2010) In silico genome-scale metabolic analysis of Pseudomonas putida KT2440 for polyhydroxyalkanoate synthesis, degradation of aromatics and anaerobic survival. Biotechnol J 5: 739–750.
-
(2010)
Biotechnol J
, vol.5
, pp. 739-750
-
-
Sohn, S.B.1
Kim, T.Y.2
Park, J.M.3
Lee, S.Y.4
-
230
-
-
84937439767
-
Improving protein production on the level of regulation of both expression and secretion pathways in Bacillus subtilis
-
Song, Y., Nikoloff, J.M., and Zhang, D. (2015) Improving protein production on the level of regulation of both expression and secretion pathways in Bacillus subtilis. J Microbiol Biotechnol 25: 963–977.
-
(2015)
J Microbiol Biotechnol
, vol.25
, pp. 963-977
-
-
Song, Y.1
Nikoloff, J.M.2
Zhang, D.3
-
231
-
-
85044437999
-
Streptomyces spp. in the biocatalysis toolbox
-
Spasic, J., Mandic, M., Djokic, L., and Nikodinovic-Runic, J. (2018) Streptomyces spp. in the biocatalysis toolbox. Appl Microbiol Biotechnol 102: 3513–3536.
-
(2018)
Appl Microbiol Biotechnol
, vol.102
, pp. 3513-3536
-
-
Spasic, J.1
Mandic, M.2
Djokic, L.3
Nikodinovic-Runic, J.4
-
232
-
-
0001615271
-
Transformation of biochemically deficient strains of Bacillus subtilis by deoxyribonucleate
-
Spizizen, J. (1958) Transformation of biochemically deficient strains of Bacillus subtilis by deoxyribonucleate. Proc Natl Acad Sci USA 44: 1072–1078.
-
(1958)
Proc Natl Acad Sci USA
, vol.44
, pp. 1072-1078
-
-
Spizizen, J.1
-
233
-
-
0034091478
-
Three biotechnical processes using Ashbya gossypii, Candida famata, or Bacillus subtilis compete with chemical riboflavin production
-
Stahmann, K.P., Revuelta, J.L., and Seulberger, H. (2000) Three biotechnical processes using Ashbya gossypii, Candida famata, or Bacillus subtilis compete with chemical riboflavin production. Appl Microbiol Biotechnol 53: 509–516.
-
(2000)
Appl Microbiol Biotechnol
, vol.53
, pp. 509-516
-
-
Stahmann, K.P.1
Revuelta, J.L.2
Seulberger, H.3
-
234
-
-
4544314878
-
Metabolic engineering and pathway construction for biotechnological production of relevant polyhydroxyalkanoates in microorganisms
-
Steinbüchel, A., and Lütke-Eversloh, T. (2003) Metabolic engineering and pathway construction for biotechnological production of relevant polyhydroxyalkanoates in microorganisms. Biochem Eng J 16: 81–96.
-
(2003)
Biochem Eng J
, vol.16
, pp. 81-96
-
-
Steinbüchel, A.1
Lütke-Eversloh, T.2
-
235
-
-
84869420041
-
Synthetic biology and metabolic engineering
-
Stephanopoulos, G. (2012) Synthetic biology and metabolic engineering. ACS Synth Biol 1: 514–525.
-
(2012)
ACS Synth Biol
, vol.1
, pp. 514-525
-
-
Stephanopoulos, G.1
-
236
-
-
84991744544
-
Ammonium acrylate biomanufacturing by an engineered Rhodococcus ruber with nitrilase overexpression and double-knockout of nitrile hydratase and amidase
-
Sun, J., Yu, H., Chen, J., Luo, H., and Shen, Z. (2016) Ammonium acrylate biomanufacturing by an engineered Rhodococcus ruber with nitrilase overexpression and double-knockout of nitrile hydratase and amidase. J Ind Microbiol Biotechnol 43: 1631–1639.
-
(2016)
J Ind Microbiol Biotechnol
, vol.43
, pp. 1631-1639
-
-
Sun, J.1
Yu, H.2
Chen, J.3
Luo, H.4
Shen, Z.5
-
237
-
-
79960839264
-
Unsterile and continuous production of polyhydroxybutyrate by Halomonas TD01
-
Tan, D., Xue, Y.S., Aibaidula, G., and Chen, G.Q. (2011) Unsterile and continuous production of polyhydroxybutyrate by Halomonas TD01. Bioresour Technol 102: 8130–8136.
-
(2011)
Bioresour Technol
, vol.102
, pp. 8130-8136
-
-
Tan, D.1
Xue, Y.S.2
Aibaidula, G.3
Chen, G.Q.4
-
238
-
-
0031442532
-
Existence of an optically heterogeneous peptide unit in poly(γ-glutamic acid) produced by Bacillus subtilis
-
Tanaka, T., Fujita, K.I., Takenishi, S., and Taniguchi, M. (1997) Existence of an optically heterogeneous peptide unit in poly(γ-glutamic acid) produced by Bacillus subtilis. J Ferment Bioeng 84: 361–364.
-
(1997)
J Ferment Bioeng
, vol.84
, pp. 361-364
-
-
Tanaka, T.1
Fujita, K.I.2
Takenishi, S.3
Taniguchi, M.4
-
239
-
-
84992397219
-
Genomic, physiologic, and proteomic insights into metabolic versatility in Roseobacter clade bacteria isolated from deep-sea water
-
Tang, K., Yang, Y., Lin, D., Li, S., Zhou, W., Han, Y., et al. (2016) Genomic, physiologic, and proteomic insights into metabolic versatility in Roseobacter clade bacteria isolated from deep-sea water. Sci Rep 6: 35528.
-
(2016)
Sci Rep
, vol.6
, pp. 35528
-
-
Tang, K.1
Yang, Y.2
Lin, D.3
Li, S.4
Zhou, W.5
Han, Y.6
-
240
-
-
85017124187
-
Engineering Halomonas species TD01 for enhanced polyhydroxyalkanoates synthesis via CRISPRi
-
Tao, W., Lv, L., and Chen, G.Q. (2017) Engineering Halomonas species TD01 for enhanced polyhydroxyalkanoates synthesis via CRISPRi. Microb Cell Fact 16: 48.
-
(2017)
Microb Cell Fact
, vol.16
, pp. 48
-
-
Tao, W.1
Lv, L.2
Chen, G.Q.3
-
241
-
-
84992437445
-
Bacillus subtilis 5'-nucleotidases with various functions and substrate specificities
-
Terakawa, A., Natsume, A., Okada, A., Nishihata, S., Kuse, J., Tanaka, K., et al. (2016) Bacillus subtilis 5'-nucleotidases with various functions and substrate specificities. BMC Microbiol 16: 249.
-
(2016)
BMC Microbiol
, vol.16
, pp. 249
-
-
Terakawa, A.1
Natsume, A.2
Okada, A.3
Nishihata, S.4
Kuse, J.5
Tanaka, K.6
-
242
-
-
33747666218
-
Overview of bacterial expression systems for heterologous protein production: from molecular and biochemical fundamentals to commercial systems
-
Terpe, K. (2006) Overview of bacterial expression systems for heterologous protein production: from molecular and biochemical fundamentals to commercial systems. Appl Microbiol Biotechnol 72: 211–222.
-
(2006)
Appl Microbiol Biotechnol
, vol.72
, pp. 211-222
-
-
Terpe, K.1
-
243
-
-
84937631111
-
Non-pathogenic Pseudomonas as platform for industrial biocatalysis
-
Grunwald, P., (ed)., Boca Raton, FL, CRC Press
-
Tiso, T., Wierckx, N., and Blank, L.M. (2014) Non-pathogenic Pseudomonas as platform for industrial biocatalysis. In Industrial Biocatalysis. Grunwald, P. (ed). Boca Raton, FL: CRC Press, pp. 323–372.
-
(2014)
Industrial Biocatalysis
, pp. 323-372
-
-
Tiso, T.1
Wierckx, N.2
Blank, L.M.3
-
244
-
-
85041051645
-
Designer rhamnolipids by reduction of congener diversity: production and characterization
-
Tiso, T., Zauter, R., Tulke, H., Leuchtle, B., Li, W.J., Behrens, B., et al. (2017) Designer rhamnolipids by reduction of congener diversity: production and characterization. Microb Cell Fact 16: 225.
-
(2017)
Microb Cell Fact
, vol.16
, pp. 225
-
-
Tiso, T.1
Zauter, R.2
Tulke, H.3
Leuchtle, B.4
Li, W.J.5
Behrens, B.6
-
245
-
-
2942561968
-
Proteomics of protein secretion by Bacillus subtilis: separating the “secrets” of the secretome
-
Tjalsma, H., Antelmann, H., Jongbloed, J.D.H., Braun, P.G., Darmon, E., Dorenbos, R., et al. (2004) Proteomics of protein secretion by Bacillus subtilis: separating the “secrets” of the secretome. Microbiol Mol Biol Rev 68: 207–233.
-
(2004)
Microbiol Mol Biol Rev
, vol.68
, pp. 207-233
-
-
Tjalsma, H.1
Antelmann, H.2
Jongbloed, J.D.H.3
Braun, P.G.4
Darmon, E.5
Dorenbos, R.6
-
246
-
-
85043357211
-
Application of adaptive laboratory evolution to overcome a flux limitation in an Escherichia coli production strain
-
Tokuyama, K., Toya, Y., Horinouchi, T., Furusawa, C., Matsuda, F. and Shimizu, H. (2018) Application of adaptive laboratory evolution to overcome a flux limitation in an Escherichia coli production strain. Biotechnol Bioeng, 115, 1542–1551.
-
(2018)
Biotechnol Bioeng
, vol.115
, pp. 1542-1551
-
-
Tokuyama, K.1
Toya, Y.2
Horinouchi, T.3
Furusawa, C.4
Matsuda, F.5
Shimizu, H.6
-
247
-
-
84922663277
-
Chassis organism from Corynebacterium glutamicum—A top-down approach to identify and delete irrelevant gene clusters
-
Unthan, S., Baumgart, M., Radek, A., Herbst, M., Siebert, D., Brühl, N., et al. (2015) Chassis organism from Corynebacterium glutamicum—A top-down approach to identify and delete irrelevant gene clusters. Biotechnol J 10: 290–301.
-
(2015)
Biotechnol J
, vol.10
, pp. 290-301
-
-
Unthan, S.1
Baumgart, M.2
Radek, A.3
Herbst, M.4
Siebert, D.5
Brühl, N.6
-
248
-
-
59949088615
-
Bioproduction of p-hydroxystyrene from glucose by the solvent-tolerant bacterium Pseudomonas putida S12 in a two-phase water-decanol fermentation
-
Verhoef, S., Wierckx, N., Westerhof, R.G.M., de Winde, J.H., and Ruijssenaars, H.J. (2009) Bioproduction of p-hydroxystyrene from glucose by the solvent-tolerant bacterium Pseudomonas putida S12 in a two-phase water-decanol fermentation. Appl Environ Microbiol 75: 931–936.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 931-936
-
-
Verhoef, S.1
Wierckx, N.2
Westerhof, R.G.M.3
de Winde, J.H.4
Ruijssenaars, H.J.5
-
249
-
-
68949161807
-
Programming cells by multiplex genome engineering and accelerated evolution
-
Wang, H.H., Isaacs, F.J., Carr, P.A., Sun, Z.Z., Xu, G., Forest, C.R., and Church, G.M. (2009) Programming cells by multiplex genome engineering and accelerated evolution. Nature 460: 894–898.
-
(2009)
Nature
, vol.460
, pp. 894-898
-
-
Wang, H.H.1
Isaacs, F.J.2
Carr, P.A.3
Sun, Z.Z.4
Xu, G.5
Forest, C.R.6
Church, G.M.7
-
250
-
-
84873027191
-
Application of synthetic biology in cyanobacteria and algae
-
Wang, B., Wang, J., Zhang, W., Meldrum, D.R., and Peebles, C.A.M. (2012) Application of synthetic biology in cyanobacteria and algae. Front Microbiol 3: 1–15.
-
(2012)
Front Microbiol
, vol.3
, pp. 1-15
-
-
Wang, B.1
Wang, J.2
Zhang, W.3
Meldrum, D.R.4
Peebles, C.A.M.5
-
252
-
-
84997173327
-
Engineering highly efficient E. coli strain for mevalonate fermentation by chromosomal integration
-
Wang, J., Niyompanich, S., Tai, Y.-S., Wang, J., Bai, W., Mahida, P., et al. (2016a) Engineering highly efficient E. coli strain for mevalonate fermentation by chromosomal integration. Appl Environ Microbiol 82: 7176–7184.
-
(2016)
Appl Environ Microbiol
, vol.82
, pp. 7176-7184
-
-
Wang, J.1
Niyompanich, S.2
Tai, Y.-S.3
Wang, J.4
Bai, W.5
Mahida, P.6
-
253
-
-
84965159016
-
Investigation of the genetics and biochemistry of roseobacticide production in the Roseobacter clade bacterium Phaeobacter inhibens
-
Wang, R., Gallant, É. and Seyedsayamdost, R. (2016b) Investigation of the genetics and biochemistry of roseobacticide production in the Roseobacter clade bacterium Phaeobacter inhibens. mBio 7, e02118-15.
-
(2016)
mBio
, vol.7
-
-
Wang, R.1
Gallant, É.2
Seyedsayamdost, R.3
-
254
-
-
0025016270
-
Cloning of an aroF allele encoding a tyrosine-insensitive 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
-
Weaver, L.M., and Herrmann, K.M. (1990) Cloning of an aroF allele encoding a tyrosine-insensitive 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase. J Bacteriol 172: 6581–6584.
-
(1990)
J Bacteriol
, vol.172
, pp. 6581-6584
-
-
Weaver, L.M.1
Herrmann, K.M.2
-
255
-
-
84984666893
-
Vibrio natriegens as a fast-growing host for molecular biology
-
Weinstock, M.T., Hesek, E.D., Wilson, C.M., and Gibson, D.G. (2016) Vibrio natriegens as a fast-growing host for molecular biology. Nat Methods 13: 849–851.
-
(2016)
Nat Methods
, vol.13
, pp. 849-851
-
-
Weinstock, M.T.1
Hesek, E.D.2
Wilson, C.M.3
Gibson, D.G.4
-
256
-
-
84902096405
-
Microbial production of amino acids and derived chemicals: synthetic biology approaches to strain development
-
Wendisch, V.F. (2014) Microbial production of amino acids and derived chemicals: synthetic biology approaches to strain development. Curr Opin Biotechnol 30: 51–58.
-
(2014)
Curr Opin Biotechnol
, vol.30
, pp. 51-58
-
-
Wendisch, V.F.1
-
257
-
-
84982783997
-
The flexible feedstock concept in Industrial Biotechnology: metabolic engineering of Escherichia coli, Corynebacterium glutamicum, Pseudomonas, Bacillus and yeast strains for access to alternative carbon sources
-
Wendisch, V.F., Brito, L.F., Gil-López, M., Hennig, G., Pfeifenschneider, J., Sgobba, E., and Veldmann, K.H. (2016) The flexible feedstock concept in Industrial Biotechnology: metabolic engineering of Escherichia coli, Corynebacterium glutamicum, Pseudomonas, Bacillus and yeast strains for access to alternative carbon sources. J Biotechnol 234: 139–157.
-
(2016)
J Biotechnol
, vol.234
, pp. 139-157
-
-
Wendisch, V.F.1
Brito, L.F.2
Gil-López, M.3
Hennig, G.4
Pfeifenschneider, J.5
Sgobba, E.6
Veldmann, K.H.7
-
258
-
-
84978153360
-
CRISPR/Cas9 mediated targeted mutagenesis of the fast growing cyanobacterium Synechococcus elongatus UTEX 2973
-
Wendt, K.E., Ungerer, J., Cobb, R.E., Zhao, H., and Pakrasi, H.B. (2016) CRISPR/Cas9 mediated targeted mutagenesis of the fast growing cyanobacterium Synechococcus elongatus UTEX 2973. Microb Cell Fact 15: 115.
-
(2016)
Microb Cell Fact
, vol.15
, pp. 115
-
-
Wendt, K.E.1
Ungerer, J.2
Cobb, R.E.3
Zhao, H.4
Pakrasi, H.B.5
-
259
-
-
8844278305
-
Bacillus subtilis as cell factory for pharmaceutical proteins: a biotechnological approach to optimize the host organism
-
Westers, L., Westers, H., and Quax, W.J. (2004) Bacillus subtilis as cell factory for pharmaceutical proteins: a biotechnological approach to optimize the host organism. Biochim Biophys Acta 1694: 299–310.
-
(2004)
Biochim Biophys Acta
, vol.1694
, pp. 299-310
-
-
Westers, L.1
Westers, H.2
Quax, W.J.3
-
260
-
-
29144524991
-
Engineering of solvent-tolerant Pseudomonas putida S12 for bioproduction of phenol from glucose
-
Wierckx, N.J.P., Ballerstedt, H., de Bont, J.M., and Wery, J. (2005) Engineering of solvent-tolerant Pseudomonas putida S12 for bioproduction of phenol from glucose. Appl Environ Microbiol 71: 8221–8227.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8221-8227
-
-
Wierckx, N.J.P.1
Ballerstedt, H.2
de Bont, J.M.3
Wery, J.4
-
261
-
-
84976908656
-
Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database
-
Winsor, G.L., Griffiths, E.J., Lo, R., Dhillon, B.K., Shay, J.A., and Brinkman, F.S.L. (2016) Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database. Nucleic Acids Res 44: D646–D653.
-
(2016)
Nucleic Acids Res
, vol.44
, pp. D646-D653
-
-
Winsor, G.L.1
Griffiths, E.J.2
Lo, R.3
Dhillon, B.K.4
Shay, J.A.5
Brinkman, F.S.L.6
-
262
-
-
80054070941
-
Growth independent rhamnolipid production from glucose using the non-pathogenic Pseudomonas putida KT2440
-
Wittgens, A., Tiso, T., Arndt, T.T., Wenk, P., Hemmerich, J., Müller, C., et al. (2011) Growth independent rhamnolipid production from glucose using the non-pathogenic Pseudomonas putida KT2440. Microb Cell Fact 10: 80.
-
(2011)
Microb Cell Fact
, vol.10
, pp. 80
-
-
Wittgens, A.1
Tiso, T.2
Arndt, T.T.3
Wenk, P.4
Hemmerich, J.5
Müller, C.6
-
263
-
-
0026338822
-
Engineering a Bacillus subtilis expression-secretion system with a strain deficient in six extracellular proteases
-
Wu, X.C., Lee, W., Tran, L., and Wong, S.L. (1991) Engineering a Bacillus subtilis expression-secretion system with a strain deficient in six extracellular proteases. J Bacteriol 173: 4952–4958.
-
(1991)
J Bacteriol
, vol.173
, pp. 4952-4958
-
-
Wu, X.C.1
Lee, W.2
Tran, L.3
Wong, S.L.4
-
264
-
-
0036307716
-
Functional production and characterization of a fibrin-specific single-chain antibody fragment from Bacillus subtilis: effects of molecular chaperones and a wall-bound protease on antibody fragment production
-
Wu, S.C., Yeung, J.C., Duan, Y., Ye, R., Szarka, S.J., Habibi, H.R., and Wong, S.L. (2002) Functional production and characterization of a fibrin-specific single-chain antibody fragment from Bacillus subtilis: effects of molecular chaperones and a wall-bound protease on antibody fragment production. Appl Environ Microbiol 68: 3261–3269.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 3261-3269
-
-
Wu, S.C.1
Yeung, J.C.2
Duan, Y.3
Ye, R.4
Szarka, S.J.5
Habibi, H.R.6
Wong, S.L.7
-
265
-
-
85044156074
-
Metabolic engineering of Pseudomonas taiwanensis VLB120 with minimal genomic modifications for high-yield phenol production
-
Wynands, B., Lenzen, C., Otto, M., Koch, F., Blank, L.M., and Wierckx, N. (2018) Metabolic engineering of Pseudomonas taiwanensis VLB120 with minimal genomic modifications for high-yield phenol production. Metab Eng 47: 121–133.
-
(2018)
Metab Eng
, vol.47
, pp. 121-133
-
-
Wynands, B.1
Lenzen, C.2
Otto, M.3
Koch, F.4
Blank, L.M.5
Wierckx, N.6
-
266
-
-
84907197172
-
Systems biology perspectives on minimal and simpler cells
-
Xavier, J.C., Patil, K.R., and Rocha, I. (2014) Systems biology perspectives on minimal and simpler cells. Microbiol Mol Biol Rev 78: 487–509.
-
(2014)
Microbiol Mol Biol Rev
, vol.78
, pp. 487-509
-
-
Xavier, J.C.1
Patil, K.R.2
Rocha, I.3
-
267
-
-
79959374585
-
Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol
-
Yim, H., Haselbeck, R., Niu, W., Pujol-Baxley, C., Burgard, A., Boldt, J., et al. (2011) Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol. Nat Chem Biol 7: 445–452.
-
(2011)
Nat Chem Biol
, vol.7
, pp. 445-452
-
-
Yim, H.1
Haselbeck, R.2
Niu, W.3
Pujol-Baxley, C.4
Burgard, A.5
Boldt, J.6
-
268
-
-
84920257993
-
Development of an enhanced chromosomal expression system based on porin synthesis operon for halophile Halomonas sp
-
Yin, J., Fu, X.Z., Wu, Q., Chen, J.C., and Chen, G.Q. (2014) Development of an enhanced chromosomal expression system based on porin synthesis operon for halophile Halomonas sp. Appl Microbiol Biotechnol 98: 8987–8997.
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 8987-8997
-
-
Yin, J.1
Fu, X.Z.2
Wu, Q.3
Chen, J.C.4
Chen, G.Q.5
-
269
-
-
85029528338
-
Engineered assimilation of exogenous and endogenous formate in Escherichia coli
-
Yishai, O., Goldbach, L., Tenenboim, H., Lindner, S.N., and Bar-Even, A. (2017) Engineered assimilation of exogenous and endogenous formate in Escherichia coli. ACS Synth Biol 6: 1722–1731.
-
(2017)
ACS Synth Biol
, vol.6
, pp. 1722-1731
-
-
Yishai, O.1
Goldbach, L.2
Tenenboim, H.3
Lindner, S.N.4
Bar-Even, A.5
-
270
-
-
84883800240
-
Development of Synechocystis sp. PCC6803 as a phototrophic cell factory
-
Yu, Y., You, L., Liu, D., Hollinshead, W., Tang, Y.J., and Zhang, F. (2013) Development of Synechocystis sp. PCC6803 as a phototrophic cell factory. Marine Drugs 11: 2894–2916.
-
(2013)
Marine Drugs
, vol.11
, pp. 2894-2916
-
-
Yu, Y.1
You, L.2
Liu, D.3
Hollinshead, W.4
Tang, Y.J.5
Zhang, F.6
-
271
-
-
85024094567
-
Metabolic engineering of Pseudomonas putida KT2440 for the production of para-hydroxybenzoic acid
-
Yu, S., Plan, M.R., Winter, G., and Krömer, J.O. (2016) Metabolic engineering of Pseudomonas putida KT2440 for the production of para-hydroxybenzoic acid. Front Bioeng Biotechnol 4: 90.
-
(2016)
Front Bioeng Biotechnol
, vol.4
, pp. 90
-
-
Yu, S.1
Plan, M.R.2
Winter, G.3
Krömer, J.O.4
-
272
-
-
70849102021
-
Impact of genome reduction on bacterial metabolism and its regulation
-
Yus, E., Maier, T., Michalodimitrakis, K., van Noort, V., Yamada, T., Chen, W.H., et al. (2009) Impact of genome reduction on bacterial metabolism and its regulation. Science 326: 1263–1268.
-
(2009)
Science
, vol.326
, pp. 1263-1268
-
-
Yus, E.1
Maier, T.2
Michalodimitrakis, K.3
van Noort, V.4
Yamada, T.5
Chen, W.H.6
-
273
-
-
84983410609
-
Improvement of Bacillus subtilis for poly-γ-glutamic acid production by genome shuffling
-
Zeng, W., Chen, G., Wu, H., Wang, J., Liu, Y., Guo, Y., and Liang, Z. (2016) Improvement of Bacillus subtilis for poly-γ-glutamic acid production by genome shuffling. Microb Biotechnol 9: 824–833.
-
(2016)
Microb Biotechnol
, vol.9
, pp. 824-833
-
-
Zeng, W.1
Chen, G.2
Wu, H.3
Wang, J.4
Liu, Y.5
Guo, Y.6
Liang, Z.7
-
274
-
-
79959913313
-
Biosensors and their applications in microbial metabolic engineering
-
Zhang, F., and Keasling, J. (2011) Biosensors and their applications in microbial metabolic engineering. Trends Microbiol 19: 323–329.
-
(2011)
Trends Microbiol
, vol.19
, pp. 323-329
-
-
Zhang, F.1
Keasling, J.2
-
275
-
-
85007477352
-
Novel T7-like expression systems used for Halomonas
-
Zhao, H., Zhang, H.M., Chen, G.Q., Chen, X., Li, T., Wu, Q., and Ouyang, Q. (2017) Novel T7-like expression systems used for Halomonas. Metab Eng 39: 128–140.
-
(2017)
Metab Eng
, vol.39
, pp. 128-140
-
-
Zhao, H.1
Zhang, H.M.2
Chen, G.Q.3
Chen, X.4
Li, T.5
Wu, Q.6
Ouyang, Q.7
-
276
-
-
84863116515
-
Modular pathway engineering of diterpenoid synthases and the mevalonic acid pathway for miltiradiene production
-
Zhou, Y.J., Gao, W., Rong, Q., Jin, G., Chu, H., Liu, W., et al. (2012) Modular pathway engineering of diterpenoid synthases and the mevalonic acid pathway for miltiradiene production. J Am Chem Soc 134: 3234–3241.
-
(2012)
J Am Chem Soc
, vol.134
, pp. 3234-3241
-
-
Zhou, Y.J.1
Gao, W.2
Rong, Q.3
Jin, G.4
Chu, H.5
Liu, W.6
-
277
-
-
84949828112
-
Tn7-Based device for calibrated heterologous gene expression in Pseudomonas putida
-
Zobel, S., Benedetti, I., Eisenbach, L., de Lorenzo, V., Wierckx, N., and Blank, L.M. (2015) Tn7-Based device for calibrated heterologous gene expression in Pseudomonas putida. ACS Synth Biol 4: 1341–1351.
-
(2015)
ACS Synth Biol
, vol.4
, pp. 1341-1351
-
-
Zobel, S.1
Benedetti, I.2
Eisenbach, L.3
de Lorenzo, V.4
Wierckx, N.5
Blank, L.M.6
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