메뉴 건너뛰기




Volumn 15, Issue 1, 2016, Pages

Genetic tools for advancement of Synechococcus sp. PCC 7002 as a cyanobacterial chassis

Author keywords

Cyanobacterial cell factories; Cyanobacterial chassis; Cyanobacterial genetic engineering; Cyanobacterial host; Synechococcus; Synechococcus 7002; Synechococcus sp. PCC 7002

Indexed keywords

BACTERIAL PROTEIN; EXONUCLEASE; HGFP PROTEIN; MORANGE PROTEIN; UNCLASSIFIED DRUG; YELLOW FLUORESCENT PROTEIN;

EID: 84995469314     PISSN: None     EISSN: 14752859     Source Type: Journal    
DOI: 10.1186/s12934-016-0584-6     Document Type: Article
Times cited : (81)

References (51)
  • 1
    • 84868334617 scopus 로고    scopus 로고
    • Engineering a cyanobacterial cell factory for production of lactic acid
    • Angermayr SA, Paszota M, Hellingwerf KJ. Engineering a cyanobacterial cell factory for production of lactic acid. Appl Environ Microbiol. 2012;78:7098-106.
    • (2012) Appl Environ Microbiol , vol.78 , pp. 7098-7106
    • Angermayr, S.A.1    Paszota, M.2    Hellingwerf, K.J.3
  • 2
    • 71849086611 scopus 로고    scopus 로고
    • Direct photosynthetic recycling of carbon dioxide to isobutyraldehyde
    • Atsumi S, Higashide W, Liao JC. Direct photosynthetic recycling of carbon dioxide to isobutyraldehyde. Nat Biotechnol. 2009;27:1177.
    • (2009) Nat Biotechnol , vol.27 , pp. 1177
    • Atsumi, S.1    Higashide, W.2    Liao, J.C.3
  • 3
    • 85050641846 scopus 로고    scopus 로고
    • Engineering limonene and bisabolene production in wild type and a glycogen-deficient mutant of Synechococcus sp. PCC 7002
    • Davies FK, Work VH, Beliaev AS, Posewitz MC. Engineering limonene and bisabolene production in wild type and a glycogen-deficient mutant of Synechococcus sp. PCC 7002. Front Bioeng Biotechnol. 2014;2:21.
    • (2014) Front Bioeng Biotechnol , vol.2 , pp. 21
    • Davies, F.K.1    Work, V.H.2    Beliaev, A.S.3    Posewitz, M.C.4
  • 4
    • 0032976323 scopus 로고    scopus 로고
    • Ethanol synthesis by genetic engineering in cyanobacteria
    • Deng M-D, Coleman JR. Ethanol synthesis by genetic engineering in cyanobacteria. Appl Environ Microbiol. 1999;65:523-8.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 523-528
    • Deng, M.-D.1    Coleman, J.R.2
  • 5
    • 70349296964 scopus 로고    scopus 로고
    • Metabolic engineering of cyanobacteria for ethanol production
    • Dexter J, Fu PC. Metabolic engineering of cyanobacteria for ethanol production. Energy Environ Sci. 2009;2:857.
    • (2009) Energy Environ Sci , vol.2 , pp. 857
    • Dexter, J.1    Fu, P.C.2
  • 6
    • 78751638661 scopus 로고    scopus 로고
    • Engineering cyanobacteria to generate high-value products
    • Ducat DC, Way JC, Silver PA. Engineering cyanobacteria to generate high-value products. Trends Biotechnol. 2011;29:857.
    • (2011) Trends Biotechnol , vol.29 , pp. 857
    • Ducat, D.C.1    Way, J.C.2    Silver, P.A.3
  • 9
    • 70449336249 scopus 로고    scopus 로고
    • Engineering a platform for photosynthetic isoprene production in cyanobacteria, using Synechocystis as the model organism
    • Lindberg P, Park S, Melis A. Engineering a platform for photosynthetic isoprene production in cyanobacteria, using Synechocystis as the model organism. Metab Eng. 2010;12:70.
    • (2010) Metab Eng , vol.12 , pp. 70
    • Lindberg, P.1    Park, S.2    Melis, A.3
  • 10
    • 79955565417 scopus 로고    scopus 로고
    • Fatty acid production in genetically modified cyanobacteria
    • Liu XY, Sheng J, Curtiss R. Fatty acid production in genetically modified cyanobacteria. Proc Natl Acad Sci USA. 2011;108:6899.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 6899
    • Liu, X.Y.1    Sheng, J.2    Curtiss, R.3
  • 12
    • 84883657058 scopus 로고    scopus 로고
    • Borrowing genes from Chlamydomonas reinhardtii for free fatty acid production in engineered cyanobacteria
    • Ruffing AM. Borrowing genes from Chlamydomonas reinhardtii for free fatty acid production in engineered cyanobacteria. J Appl Phycol. 2013;25:1495-507.
    • (2013) J Appl Phycol , vol.25 , pp. 1495-1507
    • Ruffing, A.M.1
  • 13
    • 85053067547 scopus 로고    scopus 로고
    • Improved free fatty acid production in cyanobacteria with Synechococcus sp. PCC 7002 as host
    • Ruffing AM. Improved free fatty acid production in cyanobacteria with Synechococcus sp. PCC 7002 as host. Front Bioeng Biotechnol. 2014;2:17.
    • (2014) Front Bioeng Biotechnol , vol.2 , pp. 17
    • Ruffing, A.M.1
  • 14
    • 79952106852 scopus 로고    scopus 로고
    • Photosynthesis driven conversion of carbon dioxide to fatty alcohols and hydrocarbons in cyanobacteria
    • Tan XM, Yao L, Gao QQ, Wang WH, Qi FX, Lu XF. Photosynthesis driven conversion of carbon dioxide to fatty alcohols and hydrocarbons in cyanobacteria. Metab Eng. 2011;13:169.
    • (2011) Metab Eng , vol.13 , pp. 169
    • Tan, X.M.1    Yao, L.2    Gao, Q.Q.3    Wang, W.H.4    Qi, F.X.5    Lu, X.F.6
  • 16
    • 84877059594 scopus 로고    scopus 로고
    • Engineering cyanobacteria to improve photosynthetic production of alka(e)nes
    • Wang W, Liu X, Lu X. Engineering cyanobacteria to improve photosynthetic production of alka(e)nes. Biotechnol Biofuels. 2013;6:1-9.
    • (2013) Biotechnol Biofuels , vol.6 , pp. 1-9
    • Wang, W.1    Liu, X.2    Lu, X.3
  • 18
    • 84864317274 scopus 로고    scopus 로고
    • Physiological effects of free fatty acid production in genetically engineered Synechococcus elongatus PCC 7942
    • Ruffing AM, Jones HDT. Physiological effects of free fatty acid production in genetically engineered Synechococcus elongatus PCC 7942. Biotechnol Bioeng. 2012;109:2190-9.
    • (2012) Biotechnol Bioeng , vol.109 , pp. 2190-2199
    • Ruffing, A.M.1    Jones, H.D.T.2
  • 19
    • 84862740614 scopus 로고    scopus 로고
    • Bacterial expression systems for recombinant protein production: E. coli and beyond
    • Chen R. Bacterial expression systems for recombinant protein production: E. coli and beyond. Biotechnol Adv. 2012;30:1102-7.
    • (2012) Biotechnol Adv , vol.30 , pp. 1102-1107
    • Chen, R.1
  • 20
    • 84875819070 scopus 로고    scopus 로고
    • Synechococcus sp. strain PCC 7002 transcriptome: acclimation to temperature, salinity, oxidative stress and mixotrophic growth conditions
    • Ludwig M, Bryant DA. Synechococcus sp. strain PCC 7002 transcriptome: acclimation to temperature, salinity, oxidative stress and mixotrophic growth conditions. Front Microbiol. 2012;3:354.
    • (2012) Front Microbiol , vol.3 , pp. 354
    • Ludwig, M.1    Bryant, D.A.2
  • 22
    • 0031934655 scopus 로고    scopus 로고
    • Alteration of low-temperature susceptibility of the cyanobacterium Synechococcus sp. PCC 7002 by genetic manipulation of membrane lipid unsaturation
    • Sakamoto T, Shen G, Higashi S, Murata N, Bryant AD. Alteration of low-temperature susceptibility of the cyanobacterium Synechococcus sp. PCC 7002 by genetic manipulation of membrane lipid unsaturation. Arch Microbiol. 1998;169:20-8.
    • (1998) Arch Microbiol , vol.169 , pp. 20-28
    • Sakamoto, T.1    Shen, G.2    Higashi, S.3    Murata, N.4    Bryant, A.D.5
  • 25
    • 33846940934 scopus 로고    scopus 로고
    • Luminescent whole-cell cyanobacterial bioreporter for measuring Fe availability in diverse marine environments
    • Boyanapalli R, Bullerjahn GS, Pohl C, Croot PL, Boyd PW, McKay RML. Luminescent whole-cell cyanobacterial bioreporter for measuring Fe availability in diverse marine environments. Appl Environ Microbiol. 2007;73:1019-24.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 1019-1024
    • Boyanapalli, R.1    Bullerjahn, G.S.2    Pohl, C.3    Croot, P.L.4    Boyd, P.W.5    McKay, R.M.L.6
  • 26
    • 84929593888 scopus 로고    scopus 로고
    • Synthetic biology toolbox for controlling gene expression in the cyanobacterium Synechococcus sp. strain PCC 7002
    • Markley AL, Begemann MB, Clarke RE, Gordon GC, Pfleger BF. Synthetic biology toolbox for controlling gene expression in the cyanobacterium Synechococcus sp. strain PCC 7002. ACS Synthetic Biology. 2015;4:595-603.
    • (2015) ACS Synthetic Biology , vol.4 , pp. 595-603
    • Markley, A.L.1    Begemann, M.B.2    Clarke, R.E.3    Gordon, G.C.4    Pfleger, B.F.5
  • 27
    • 34247640781 scopus 로고    scopus 로고
    • 2-concentrating mechanism in a euryhaline, coastal marine cyanobacterium, Synechococcus sp. Strain PCC 7002: role of NdhR/CcmR
    • 2-concentrating mechanism in a euryhaline, coastal marine cyanobacterium, Synechococcus sp. Strain PCC 7002: role of NdhR/CcmR. J Bacteriol. 2007;189:3335-47.
    • (2007) J Bacteriol , vol.189 , pp. 3335-3347
    • Woodger, F.J.1    Bryant, D.A.2    Price, G.D.3
  • 28
    • 84965157479 scopus 로고    scopus 로고
    • Construction of new synthetic biology tools for the control of gene expression in the cyanobacterium Synechococcus sp. strain PCC 7002
    • Zess EK, Begemann MB, Pfleger BF. Construction of new synthetic biology tools for the control of gene expression in the cyanobacterium Synechococcus sp. strain PCC 7002. Biotechnol Bioeng. 2016;113:424-32.
    • (2016) Biotechnol Bioeng , vol.113 , pp. 424-432
    • Zess, E.K.1    Begemann, M.B.2    Pfleger, B.F.3
  • 29
    • 79952117595 scopus 로고    scopus 로고
    • Expression of genes in cyanobacteria: adaptation of endogenous plasmids as platforms for high-level gene expression in Synechococcus sp. PCC 7002
    • In: Totowa NJ, Carpentier R, editors. New York: Humana Press
    • Xu Y, Alvey RM, Byrne PO, Graham JE, Shen G, Bryant DA. Expression of genes in cyanobacteria: adaptation of endogenous plasmids as platforms for high-level gene expression in Synechococcus sp. PCC 7002. In: Totowa NJ, Carpentier R, editors. Photosynthesis research protocols. New York: Humana Press; 2011. p. 273-93.
    • (2011) Photosynthesis research protocols , pp. 273-293
    • Xu, Y.1    Alvey, R.M.2    Byrne, P.O.3    Graham, J.E.4    Shen, G.5    Bryant, D.A.6
  • 31
    • 84980313965 scopus 로고
    • The production of hydrogen peroxide by blue-green algae: a survey
    • Stevens SE, Patterson COP, Myers J. The production of hydrogen peroxide by blue-green algae: a survey. J Phycol. 1973;9:427-30.
    • (1973) J Phycol , vol.9 , pp. 427-430
    • Stevens, S.E.1    Patterson, C.O.P.2    Myers, J.3
  • 33
    • 0019165497 scopus 로고
    • Transformation in Agmenellum quadruplicatum
    • Stevens SE, Porter RD. Transformation in Agmenellum quadruplicatum. Proc Natl Acad Sci. 1980;77:6052-6.
    • (1980) Proc Natl Acad Sci , vol.77 , pp. 6052-6056
    • Stevens, S.E.1    Porter, R.D.2
  • 34
    • 0029973636 scopus 로고    scopus 로고
    • FACS-optimized mutants of the green fluorescent protein (GFP)
    • Cormack BP, Valdivia RH, Falkow S. FACS-optimized mutants of the green fluorescent protein (GFP). Gene. 1996;173:33-8.
    • (1996) Gene , vol.173 , pp. 33-38
    • Cormack, B.P.1    Valdivia, R.H.2    Falkow, S.3
  • 35
    • 84995435674 scopus 로고    scopus 로고
    • FACS-optimized mutants of the green fluorescent protein (GFP)
    • 8 Sept
    • Cormack BP, Valdivia RH, Falkow S. FACS-optimized mutants of the green fluorescent protein (GFP). US patent no. 5,804,387, 8 Sept 1998.
    • (1998) US patent no. 5 , vol.804 , Issue.387
    • Cormack, B.P.1    Valdivia, R.H.2    Falkow, S.3
  • 36
    • 84872373339 scopus 로고    scopus 로고
    • Acclimation of the global transcriptome of the cyanobacterium Synechococcus sp. strain PCC 7002 to nutrient limitations and different nitrogen sources
    • Ludwig M, Bryant DA. Acclimation of the global transcriptome of the cyanobacterium Synechococcus sp. strain PCC 7002 to nutrient limitations and different nitrogen sources. Front Microbiol. 2012;3:145.
    • (2012) Front Microbiol , vol.3 , pp. 145
    • Ludwig, M.1    Bryant, D.A.2
  • 38
    • 84907959054 scopus 로고    scopus 로고
    • Selection of proper reference genes for the cyanobacterium Synechococcus PCC 7002 using real-time quantitative PCR
    • Szekeres E, Sicora C, Dragoş N, Druğ B. Selection of proper reference genes for the cyanobacterium Synechococcus PCC 7002 using real-time quantitative PCR. FEMS Microbiol Lett. 2014;359:102-9.
    • (2014) FEMS Microbiol Lett , vol.359 , pp. 102-109
    • Szekeres, E.1    Sicora, C.2    Dragoş, N.3    Drugă, B.4
  • 40
    • 11144267737 scopus 로고    scopus 로고
    • Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein. Nat
    • Shaner NC, Campbell RE, Steinbach PA, Giepmans BNG, Palmer AE, Tsien RY. Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein. Nat. Biotech. 2004;22:1567-72.
    • (2004) Biotech , vol.22 , pp. 1567-1572
    • Shaner, N.C.1    Campbell, R.E.2    Steinbach, P.A.3    Giepmans, B.N.G.4    Palmer, A.E.5    Tsien, R.Y.6
  • 42
    • 0033839723 scopus 로고    scopus 로고
    • Construction of promoter probe vectors for Synechocystis sp. PCC 6803 using the light-emitting reporter systems Gfp and LuxAB
    • Kunert A, Hagemann M, Erdmann N. Construction of promoter probe vectors for Synechocystis sp. PCC 6803 using the light-emitting reporter systems Gfp and LuxAB. J Microbiol Methods. 2000;41:185-94.
    • (2000) J Microbiol Methods , vol.41 , pp. 185-194
    • Kunert, A.1    Hagemann, M.2    Erdmann, N.3
  • 43
    • 34547555385 scopus 로고    scopus 로고
    • Melina II: a web tool for comparisons among several predictive algorithms to find potential motifs from promoter regions
    • Okumura T, Makiguchi H, Makita Y, Yamashita R, Nakai K. Melina II: a web tool for comparisons among several predictive algorithms to find potential motifs from promoter regions. Nucleic Acids Res. 2007;35:W227-31.
    • (2007) Nucleic Acids Res , vol.35 , pp. W227-W231
    • Okumura, T.1    Makiguchi, H.2    Makita, Y.3    Yamashita, R.4    Nakai, K.5
  • 45
    • 0031664853 scopus 로고    scopus 로고
    • A new logic for DNA engineering using recombination in Escherichia coli
    • Zhang Y, Buchholz F, Muyrers JPP, Stewart AF. A new logic for DNA engineering using recombination in Escherichia coli. Nat Genet. 1998;20:123-8.
    • (1998) Nat Genet , vol.20 , pp. 123-128
    • Zhang, Y.1    Buchholz, F.2    Muyrers, J.P.P.3    Stewart, A.F.4
  • 46
    • 79957498811 scopus 로고    scopus 로고
    • Chapter twenty-four-synthetic biology in cyanobacteria: engineering and analyzing novel functions
    • In: Chris V, editor. New York: Academic Press;
    • Heidorn T, Camsund D, Huang H-H, Lindberg P, Oliveira P, Stensjö K, Lindblad P. Chapter twenty-four-synthetic biology in cyanobacteria: engineering and analyzing novel functions. In: Chris V, editor. Methods in enzymology, vol. 497. New York: Academic Press; 2011. p. 539-79.
    • (2011) Methods in enzymology , vol.497 , pp. 539-579
    • Heidorn, T.1    Camsund, D.2    Huang, H-H.3    Lindberg, P.4    Oliveira, P.5    Stensjö, K.6    Lindblad, P.7
  • 49
    • 0038182527 scopus 로고    scopus 로고
    • RNA polyadenylation and degradation in cyanobacteria are similar to the chloroplast but different from Escherichia coli
    • Rott R, Zipor G, Portnoy V, Liveanu V, Schuster G. RNA polyadenylation and degradation in cyanobacteria are similar to the chloroplast but different from Escherichia coli. J Biol Chem. 2003;278:15771-7.
    • (2003) J Biol Chem , vol.278 , pp. 15771-15777
    • Rott, R.1    Zipor, G.2    Portnoy, V.3    Liveanu, V.4    Schuster, G.5
  • 50
    • 84876177525 scopus 로고    scopus 로고
    • Use of degradation tags to control protein levels in the cyanobacterium Synechocystis sp. strain PCC 6803
    • Landry BP, Stöckel J, Pakrasi HB. Use of degradation tags to control protein levels in the cyanobacterium Synechocystis sp. strain PCC 6803. Appl Environ Microbiol. 2013;79:2833-5.
    • (2013) Appl Environ Microbiol , vol.79 , pp. 2833-2835
    • Landry, B.P.1    Stöckel, J.2    Pakrasi, H.B.3
  • 51
    • 71149108056 scopus 로고    scopus 로고
    • Correlation of mRNA and protein in complex biological samples
    • Maier T, Güell M, Serrano L. Correlation of mRNA and protein in complex biological samples. FEBS Lett. 2009;583:3966-73.
    • (2009) FEBS Lett , vol.583 , pp. 3966-3973
    • Maier, T.1    Güell, M.2    Serrano, L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.