-
1
-
-
84860780250
-
Two distinct pathways for essential metabolic precursors for isoprenoid biosynthesis
-
Kuzuyama T, Seto H. 2012. Two distinct pathways for essential metabolic precursors for isoprenoid biosynthesis. Proc Jpn Acad Ser B Phys Biol Sci 88:41-52. http://dx.doi.org/10.2183/pjab.88.41.
-
(2012)
Proc Jpn Acad Ser B Phys Biol Sci
, vol.88
, pp. 41-52
-
-
Kuzuyama, T.1
Seto, H.2
-
2
-
-
33847309176
-
Balancing a heterologous mevalonate pathway for improved isoprenoid production in Escherichia coli
-
Pitera DJ, Paddon CJ, Newman JD, Keasling JD. 2007. Balancing a heterologous mevalonate pathway for improved isoprenoid production in Escherichia coli. Metab Eng 9:193-207. http://dx.doi.org/10.1016/j.ymben.2006.11.002.
-
(2007)
Metab Eng
, vol.9
, pp. 193-207
-
-
Pitera, D.J.1
Paddon, C.J.2
Newman, J.D.3
Keasling, J.D.4
-
3
-
-
0038391517
-
Engineering a mevalonate pathway in Escherichia coli for production of terpenoids
-
Martin VJ, Pitera DJ, Withers ST, Newman JD, Keasling JD. 2003. Engineering a mevalonate pathway in Escherichia coli for production of terpenoids. Nat Biotechnol 21:796-802. http://dx.doi.org/10.1038/nbt833.
-
(2003)
Nat Biotechnol
, vol.21
, pp. 796-802
-
-
Martin, V.J.1
Pitera, D.J.2
Withers, S.T.3
Newman, J.D.4
Keasling, J.D.5
-
4
-
-
84900434199
-
-
April,. U.S. patent
-
Beck ZQ, Eliot AC, Peres CM, Vaviline DV. April 2013. Utilization of phosphoketolase in the production of mevalonate, isoprenoid precursors, and isoprene. U.S. patent 20130089906 A1.
-
(2013)
Utilization of phosphoketolase in the production of mevalonate, isoprenoid precursors, and isoprene
-
-
Beck, Z.Q.1
Eliot, A.C.2
Peres, C.M.3
Vaviline, D.V.4
-
5
-
-
84902186055
-
Scalable production of mechanically tunable block polymers from sugar
-
Xiong M, Schneiderman DK, Bates FS, Hillmyer MA, Zhang K. 2014. Scalable production of mechanically tunable block polymers from sugar. Proc Natl Acad Sci U S A 111:8357-8362. http://dx.doi.org/10.1073/pnas.1404596111.
-
(2014)
Proc Natl Acad Sci U S A
, vol.111
, pp. 8357-8362
-
-
Xiong, M.1
Schneiderman, D.K.2
Bates, F.S.3
Hillmyer, M.A.4
Zhang, K.5
-
7
-
-
84997558603
-
-
November. WO patent
-
Beck ZQ, Miller MC, Peres CM, Primak YA, Pucci JP, Wells DH. November 2012. Production of mevalonate, isoprene, and isoprenoids using genes encoding polypeptides having thiolase, hmg-coa synthase and hmg-coa reductase enzymatic activities. WO patent 2012149469 A1.
-
(2012)
Production of mevalonate, isoprene, and isoprenoids using genes encoding polypeptides having thiolase, hmg-coa synthase and hmg-coa reductase enzymatic activities
-
-
Beck, Z.Q.1
Miller, M.C.2
Peres, C.M.3
Primak, Y.A.4
Pucci, J.P.5
Wells, D.H.6
-
8
-
-
33947461668
-
Isolation of a new acetate-replacing factor
-
Wright LD, Cresson EL, Skeggs HR, MacRae GDE, Hoffman CH, Wolf DE, Folkers K. 1956. Isolation of a new acetate-replacing factor. J Am Chem Soc 78:5273-5275. http://dx.doi.org/10.1021/ja01601a033.
-
(1956)
J Am Chem Soc
, vol.78
, pp. 5273-5275
-
-
Wright, L.D.1
Cresson, E.L.2
Skeggs, H.R.3
MacRae, G.D.E.4
Hoffman, C.H.5
Wolf, D.E.6
Folkers, K.7
-
9
-
-
18644385075
-
Hiochic acid, a new growth factor for Lactobacillus homohiochi and Lactobacillus heterohiochi
-
Tamura G. 2004. Hiochic acid, a new growth factor for Lactobacillus homohiochi and Lactobacillus heterohiochi. J Gen Appl Microbiol 50:327-330.
-
(2004)
J Gen Appl Microbiol
, vol.50
, pp. 327-330
-
-
Tamura, G.1
-
11
-
-
68449103617
-
Stabilized gene duplication enables long-term selection-free heterologous pathway expression
-
Tyo KE, Ajikumar PK, Stephanopoulos G. 2009. Stabilized gene duplication enables long-term selection-free heterologous pathway expression. Nat Biotechnol 27:760-765. http://dx.doi.org/10.1038/nbt.1555.
-
(2009)
Nat Biotechnol
, vol.27
, pp. 760-765
-
-
Tyo, K.E.1
Ajikumar, P.K.2
Stephanopoulos, G.3
-
12
-
-
38749148516
-
Synthetic biology for synthetic chemistry
-
Keasling JD. 2008. Synthetic biology for synthetic chemistry. ACS Chem Biol 3:64-76. http://dx.doi.org/10.1021/cb7002434.
-
(2008)
ACS Chem Biol
, vol.3
, pp. 64-76
-
-
Keasling, J.D.1
-
13
-
-
34247892449
-
Gene and cell survival: lessons from prokaryotic plasmid R1
-
de la Cueva-Méndez G, Pimentel B. 2007. Gene and cell survival: lessons from prokaryotic plasmid R1. EMBO Rep 8:458-464. http://dx.doi.org/10.1038/sj.embor.7400957.
-
(2007)
EMBO Rep
, vol.8
, pp. 458-464
-
-
de la Cueva-Méndez, G.1
Pimentel, B.2
-
14
-
-
2342653439
-
Plasmid copy number and plasmid stability
-
Friehs K. 2004. Plasmid copy number and plasmid stability. Adv Biochem Eng Biotechnol 86:47-82.
-
(2004)
Adv Biochem Eng Biotechnol
, vol.86
, pp. 47-82
-
-
Friehs, K.1
-
15
-
-
84961223765
-
Metabolic burden: cornerstones in synthetic biology and metabolic engineering applications
-
Wu G, Yan Q, Jones JA, Tang YJ, Fong SS, Koffas MA. 2016. Metabolic burden: cornerstones in synthetic biology and metabolic engineering applications. Trends Biotechnol 34:652-664. http://dx.doi.org/10.1016/j.tibtech.2016.02.010.
-
(2016)
Trends Biotechnol
, vol.34
, pp. 652-664
-
-
Wu, G.1
Yan, Q.2
Jones, J.A.3
Tang, Y.J.4
Fong, S.S.5
Koffas, M.A.6
-
16
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko KA, Wanner BL. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 97:6640-6645. http://dx.doi.org/10.1073/pnas.120163297.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
17
-
-
0033983166
-
Towards single-copy gene expression systems making gene cloning physiologically relevant: lambda InCh, a simple Escherichia coli plasmid-chromosome shuttle system
-
Boyd D, Weiss DS, Chen JC, Beckwith J. 2000. Towards single-copy gene expression systems making gene cloning physiologically relevant: lambda InCh, a simple Escherichia coli plasmid-chromosome shuttle system. J Bacteriol 182:842-847. http://dx.doi.org/10.1128/JB.182.3.842-847.2000.
-
(2000)
J Bacteriol
, vol.182
, pp. 842-847
-
-
Boyd, D.1
Weiss, D.S.2
Chen, J.C.3
Beckwith, J.4
-
18
-
-
84926665601
-
A rapid and reliable strategy for chromosomal integration of gene(s) with multiple copies
-
Gu P, Yang F, Su T, Wang Q, Liang Q, Qi Q. 2015. A rapid and reliable strategy for chromosomal integration of gene(s) with multiple copies. Sci Rep 5:9684. http://dx.doi.org/10.1038/srep09684.
-
(2015)
Sci Rep
, vol.5
, pp. 9684
-
-
Gu, P.1
Yang, F.2
Su, T.3
Wang, Q.4
Liang, Q.5
Qi, Q.6
-
19
-
-
0022378550
-
The FLP recombinase of the yeast 2-micron plasmid: characterization of its recombination site
-
Senecoff JF, Bruckner RC, Cox MM. 1985. The FLP recombinase of the yeast 2-micron plasmid: characterization of its recombination site. Proc Natl Acad Sci U S A 82:7270-7274. http://dx.doi.org/10.1073/pnas.82.21.7270.
-
(1985)
Proc Natl Acad Sci U S A
, vol.82
, pp. 7270-7274
-
-
Senecoff, J.F.1
Bruckner, R.C.2
Cox, M.M.3
-
20
-
-
84862275341
-
Combinatorial modulation of galP and glk gene expression for improved alternative glucose utilization
-
Lu J, Tang J, Liu Y, Zhu X, Zhang T, Zhang X. 2012. Combinatorial modulation of galP and glk gene expression for improved alternative glucose utilization. Appl Microbiol Biotechnol 93:2455-2462. http://dx.doi.org/10.1007/s00253-011-3752-y.
-
(2012)
Appl Microbiol Biotechnol
, vol.93
, pp. 2455-2462
-
-
Lu, J.1
Tang, J.2
Liu, Y.3
Zhu, X.4
Zhang, T.5
Zhang, X.6
-
22
-
-
0030759410
-
Gene expression from plasmids containing the araBAD promoter at subsaturating inducer concentrations represents mixed populations
-
Siegele DA, Hu JC. 1997. Gene expression from plasmids containing the araBAD promoter at subsaturating inducer concentrations represents mixed populations. Proc Natl Acad SciUS A 94:8168-8172. http://dx.doi.org/10.1073/pnas.94.15.8168.
-
(1997)
Proc Natl Acad SciUS A
, vol.94
, pp. 8168-8172
-
-
Siegele, D.A.1
Hu, J.C.2
-
23
-
-
77951237154
-
Production of recombinant proteins in E. coli by the heat inducible expression system based on the phage lambda pL and/or pR promoters
-
Valdez-Cruz NA, Caspeta L, Perez NO, Ramirez OT, Trujillo-Roldan MA. 2010. Production of recombinant proteins in E. coli by the heat inducible expression system based on the phage lambda pL and/or pR promoters. Microb Cell Fact 9:18. http://dx.doi.org/10.1186/1475-2859-9-18.
-
(2010)
Microb Cell Fact
, vol.9
, pp. 18
-
-
Valdez-Cruz, N.A.1
Caspeta, L.2
Perez, N.O.3
Ramirez, O.T.4
Trujillo-Roldan, M.A.5
-
24
-
-
84940303056
-
Construction of a synthetically engineered nirB promoter for expression of recombinant protein in Escherichia coli
-
Nasr R, Akbari Eidgahi MR. 2014. Construction of a synthetically engineered nirB promoter for expression of recombinant protein in Escherichia coli. Jundishapur J Microbiol 7:e15942.
-
(2014)
Jundishapur J Microbiol
, vol.7
-
-
Nasr, R.1
Akbari Eidgahi, M.R.2
-
25
-
-
33747376106
-
Engineering of promoter replacement cassettes for fine-tuning of gene expression in Saccharomyces cerevisiae
-
Nevoigt E, Kohnke J, Fischer CR, Alper H, Stahl U, Stephanopoulos G. 2006. Engineering of promoter replacement cassettes for fine-tuning of gene expression in Saccharomyces cerevisiae. Appl Environ Microbiol 72: 5266-5273. http://dx.doi.org/10.1128/AEM.00530-06.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5266-5273
-
-
Nevoigt, E.1
Kohnke, J.2
Fischer, C.R.3
Alper, H.4
Stahl, U.5
Stephanopoulos, G.6
-
26
-
-
79958224739
-
High-yield resveratrol production in engineered Escherichia coli
-
Lim CG, Fowler ZL, Hueller T, Schaffer S, Koffas MA. 2011. High-yield resveratrol production in engineered Escherichia coli. Appl Environ Microbiol 77:3451-3460. http://dx.doi.org/10.1128/AEM.02186-10.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 3451-3460
-
-
Lim, C.G.1
Fowler, Z.L.2
Hueller, T.3
Schaffer, S.4
Koffas, M.A.5
-
27
-
-
0036302723
-
The glycolytic flux in Escherichia coli is controlled by the demand for ATP
-
Koebmann BJ, Westerhoff HV, Snoep JL, Nilsson D, Jensen PR. 2002. The glycolytic flux in Escherichia coli is controlled by the demand for ATP. J Bacteriol 184:3909-3916. http://dx.doi.org/10.1128/JB.184.14.3909-3916.2002.
-
(2002)
J Bacteriol
, vol.184
, pp. 3909-3916
-
-
Koebmann, B.J.1
Westerhoff, H.V.2
Snoep, J.L.3
Nilsson, D.4
Jensen, P.R.5
-
28
-
-
0037417864
-
Engineering the metabolism of Escherichia coli W3110 for the conversion of sugar to redoxneutral and oxidized products: homoacetate production
-
Causey TB, Zhou S, Shanmugam KT, Ingram LO. 2003. Engineering the metabolism of Escherichia coli W3110 for the conversion of sugar to redoxneutral and oxidized products: homoacetate production. Proc Natl Acad Sci U S A 100:825-832. http://dx.doi.org/10.1073/pnas.0337684100.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 825-832
-
-
Causey, T.B.1
Zhou, S.2
Shanmugam, K.T.3
Ingram, L.O.4
-
29
-
-
1442306213
-
Engineering Escherichia coli for efficient conversion of glucose to pyruvate
-
Causey TB, Shanmugam KT, Yomano LP, Ingram LO. 2004. Engineering Escherichia coli for efficient conversion of glucose to pyruvate. Proc Natl Acad Sci U S A 101:2235-2240. http://dx.doi.org/10.1073/pnas.0308171100.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 2235-2240
-
-
Causey, T.B.1
Shanmugam, K.T.2
Yomano, L.P.3
Ingram, L.O.4
-
30
-
-
55049095515
-
High glycolytic flux improves pyruvate production by a metabolically engineered Escherichia coli strain
-
Zhu Y, Eiteman MA, Altman R, Altman E. 2008. High glycolytic flux improves pyruvate production by a metabolically engineered Escherichia coli strain. Appl Environ Microbiol 74:6649-6655. http://dx.doi.org/10.1128/AEM.01610-08.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 6649-6655
-
-
Zhu, Y.1
Eiteman, M.A.2
Altman, R.3
Altman, E.4
-
31
-
-
85004191348
-
Complete genome sequence of Escherichia coli BW25113
-
Grenier F, Matteau D, Baby V, Rodrigue S. 2014. Complete genome sequence of Escherichia coli BW25113. Genome Announc 2(5):e01038-14. http://dx.doi.org/10.1128/genomeA.01038-14.
-
(2014)
Genome Announc
, vol.2
, Issue.5
-
-
Grenier, F.1
Matteau, D.2
Baby, V.3
Rodrigue, S.4
-
32
-
-
41549115091
-
The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse
-
Durfee T, Nelson R, Baldwin S, Plunkett G, III, Burland V, Mau B, Petrosino JF, Qin X, Muzny DM, Ayele M, Gibbs RA, Csörgo B, Pósfai G, Weinstock GM, Blattner FR. 2008. The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse. J Bacteriol 190:2597-2606. http://dx.doi.org/10.1128/JB.01695-07.
-
(2008)
J Bacteriol
, vol.190
, pp. 2597-2606
-
-
Durfee, T.1
Nelson, R.2
Baldwin, S.3
Plunkett, G.4
Burland, V.5
Mau, B.6
Petrosino, J.F.7
Qin, X.8
Muzny, D.M.9
Ayele, M.10
Gibbs, R.A.11
Csörgo, B.12
Pósfai, G.13
Weinstock, G.M.14
Blattner, F.R.15
-
33
-
-
0642342156
-
Creation of chimeric junctions, deletions, and insertions by PCR
-
Pont-Kingdon G. 2003. Creation of chimeric junctions, deletions, and insertions by PCR. Methods Mol Biol 226:511-516.
-
(2003)
Methods Mol Biol
, vol.226
, pp. 511-516
-
-
Pont-Kingdon, G.1
-
34
-
-
77957830356
-
E. coli genome manipulation by P1 transduction
-
Chapter 1, Unit 1.17
-
Thomason LC, Costantino N, Court DL. 2001. E. coli genome manipulation by P1 transduction. Curr Protoc Mol Biol Chapter 1:Unit 1.17. http://dx.doi.org/10.1002/0471142727.mb0117s79.
-
(2001)
Curr Protoc Mol Biol
-
-
Thomason, L.C.1
Costantino, N.2
Court, D.L.3
-
35
-
-
0026485287
-
Carbon and energy metabolism of atp mutants of Escherichia coli
-
Jensen PR, Michelsen O. 1992. Carbon and energy metabolism of atp mutants of Escherichia coli. J Bacteriol 174:7635-7641.
-
(1992)
J Bacteriol
, vol.174
, pp. 7635-7641
-
-
Jensen, P.R.1
Michelsen, O.2
-
37
-
-
13244291348
-
Functional interactions between the carbon and iron utilization regulators, Crp and Fur, in Escherichia coli
-
Zhang Z, Gosset G, Barabote R, Gonzalez CS, Cuevas WA, Saier MH, Jr. 2005. Functional interactions between the carbon and iron utilization regulators, Crp and Fur, in Escherichia coli. J Bacteriol 187:980-990. http://dx.doi.org/10.1128/JB.187.3.980-990.2005.
-
(2005)
J Bacteriol
, vol.187
, pp. 980-990
-
-
Zhang, Z.1
Gosset, G.2
Barabote, R.3
Gonzalez, C.S.4
Cuevas, W.A.5
Saier, M.H.6
-
38
-
-
84930971149
-
CRISPathBrick: modular combinatorial assembly of type II-A CRISPR arrays for dCas9-mediated multiplex transcriptional repression in E. coli
-
Cress BF, Toparlak OD, Guleria S, Lebovich M, Stieglitz JT, Englaender JA, Jones JA, Linhardt RJ, Koffas MA. 2015. CRISPathBrick: modular combinatorial assembly of type II-A CRISPR arrays for dCas9-mediated multiplex transcriptional repression in E. coli. ACS Synth Biol 4:987-1000. http://dx.doi.org/10.1021/acssynbio.5b00012.
-
(2015)
ACS Synth Biol
, vol.4
, pp. 987-1000
-
-
Cress, B.F.1
Toparlak, O.D.2
Guleria, S.3
Lebovich, M.4
Stieglitz, J.T.5
Englaender, J.A.6
Jones, J.A.7
Linhardt, R.J.8
Koffas, M.A.9
-
39
-
-
80052021573
-
Genome-scale metabolic network modeling results in minimal interventions that cooperatively force carbon flux towards malonyl-CoA
-
Xu P, Ranganathan S, Fowler ZL, Maranas CD, Koffas MA. 2011. Genome-scale metabolic network modeling results in minimal interventions that cooperatively force carbon flux towards malonyl-CoA. Metab Eng 13:578-587. http://dx.doi.org/10.1016/j.ymben.2011.06.008.
-
(2011)
Metab Eng
, vol.13
, pp. 578-587
-
-
Xu, P.1
Ranganathan, S.2
Fowler, Z.L.3
Maranas, C.D.4
Koffas, M.A.5
|