-
1
-
-
84892555212
-
Small, smaller, smallest: the origins and evolution of ancient dual symbioses in a Phloem-feeding insect
-
1 Bennett, G.M., Moran, N.A., Small, smaller, smallest: the origins and evolution of ancient dual symbioses in a Phloem-feeding insect. Genome Biol Evol 5 (2013), 1675–1688.
-
(2013)
Genome Biol Evol
, vol.5
, pp. 1675-1688
-
-
Bennett, G.M.1
Moran, N.A.2
-
2
-
-
84880130007
-
Extraordinary expansion of a Sorangium cellulosum genome from an alkaline milieu
-
2 Han, K., Li, Z.F., Peng, R., Zhu, L.P., Zhou, T., Wang, L.G., Li, S.G., Zhang, X.B., Hu, W., Wu, Z.H., et al. Extraordinary expansion of a Sorangium cellulosum genome from an alkaline milieu. Sci Rep, 3, 2013, 2101.
-
(2013)
Sci Rep
, vol.3
, pp. 2101
-
-
Han, K.1
Li, Z.F.2
Peng, R.3
Zhu, L.P.4
Zhou, T.5
Wang, L.G.6
Li, S.G.7
Zhang, X.B.8
Hu, W.9
Wu, Z.H.10
-
3
-
-
84925517557
-
Insights from 20 years of bacterial genome sequencing
-
3 Land, M., Hauser, L., Jun, S.R., Nookaew, I., Leuze, M.R., Ahn, T.H., Karpinets, T., Lund, O., Kora, G., Wassenaar, T., et al. Insights from 20 years of bacterial genome sequencing. Funct Integr Genomics 15 (2015), 141–161.
-
(2015)
Funct Integr Genomics
, vol.15
, pp. 141-161
-
-
Land, M.1
Hauser, L.2
Jun, S.R.3
Nookaew, I.4
Leuze, M.R.5
Ahn, T.H.6
Karpinets, T.7
Lund, O.8
Kora, G.9
Wassenaar, T.10
-
4
-
-
57549101206
-
Bacteria as computers making computers
-
4 Danchin, A., Bacteria as computers making computers. FEMS Microbiol Rev 33 (2009), 3–26.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 3-26
-
-
Danchin, A.1
-
5
-
-
84863608607
-
Scaling up synthetic biology: do not forget the chassis
-
5 Danchin, A., Scaling up synthetic biology: do not forget the chassis. FEBS Lett 586 (2012), 2129–2137.
-
(2012)
FEBS Lett
, vol.586
, pp. 2129-2137
-
-
Danchin, A.1
-
6
-
-
84876808409
-
From essential to persistent genes: a functional approach to constructing synthetic life
-
6 Acevedo-Rocha, C.G., Fang, G., Schmidt, M., Ussery, D.W., Danchin, A., From essential to persistent genes: a functional approach to constructing synthetic life. Trends Genet 29 (2013), 273–279.
-
(2013)
Trends Genet
, vol.29
, pp. 273-279
-
-
Acevedo-Rocha, C.G.1
Fang, G.2
Schmidt, M.3
Ussery, D.W.4
Danchin, A.5
-
7
-
-
77749296117
-
Genome update: the 1000th genome – a cautionary tale
-
7 Lagesen, K., Ussery, D.W., Wassenaar, T.M., Genome update: the 1000th genome – a cautionary tale. Microbiology 156 (2010), 603–608.
-
(2010)
Microbiology
, vol.156
, pp. 603-608
-
-
Lagesen, K.1
Ussery, D.W.2
Wassenaar, T.M.3
-
8
-
-
4544371669
-
Determination of the core of a minimal bacterial gene set
-
8 Gil, R., Silva, F.J., Pereto, J., Moya, A., Determination of the core of a minimal bacterial gene set. Microbiol Mol Biol Rev 68 (2004), 518–537.
-
(2004)
Microbiol Mol Biol Rev
, vol.68
, pp. 518-537
-
-
Gil, R.1
Silva, F.J.2
Pereto, J.3
Moya, A.4
-
9
-
-
83855165692
-
Extreme genome reduction in symbiotic bacteria
-
9 McCutcheon, J.P., Moran, N.A., Extreme genome reduction in symbiotic bacteria. Nature Rev Microbiol 10 (2012), 13–26.
-
(2012)
Nature Rev Microbiol
, vol.10
, pp. 13-26
-
-
McCutcheon, J.P.1
Moran, N.A.2
-
11
-
-
77950452960
-
Evolution of reduced prokaryotic genomes and the minimal cell concept: variations on a theme
-
11 Delaye, L., Moya, A., Evolution of reduced prokaryotic genomes and the minimal cell concept: variations on a theme. BioEssays 32 (2010), 281–287.
-
(2010)
BioEssays
, vol.32
, pp. 281-287
-
-
Delaye, L.1
Moya, A.2
-
12
-
-
84947563486
-
Evolution of small prokaryotic genomes
-
12 Martinez-Cano, D.J., Reyes-Prieto, M., Martinez-Romero, E., Partida-Martinez, L.P., Latorre, A., Moya, A., Delaye, L., Evolution of small prokaryotic genomes. Front Microbiol, 5, 2014, 742.
-
(2014)
Front Microbiol
, vol.5
, pp. 742
-
-
Martinez-Cano, D.J.1
Reyes-Prieto, M.2
Martinez-Romero, E.3
Partida-Martinez, L.P.4
Latorre, A.5
Moya, A.6
Delaye, L.7
-
13
-
-
0345504146
-
Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome
-
13 Pósfai, G., Kolisnychenko, V., Bereczki, Z., Blattner, F.R., Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome. Nucl Acids Res 27 (1999), 4409–4415.
-
(1999)
Nucl Acids Res
, vol.27
, pp. 4409-4415
-
-
Pósfai, G.1
Kolisnychenko, V.2
Bereczki, Z.3
Blattner, F.R.4
-
14
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
14 Datsenko, K.A., Wanner, B.L., One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97 (2000), 6640–6645.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
15
-
-
0036228521
-
Engineering a reduced Escherichia coli genome
-
15 Kolisnychenko, V., Plunkett, G., Herring, C.D., Fehér, T., Pósfai, J., Blattner, F.R., Pósfai, G., Engineering a reduced Escherichia coli genome. Genome Res 12 (2002), 640–647.
-
(2002)
Genome Res
, vol.12
, pp. 640-647
-
-
Kolisnychenko, V.1
Plunkett, G.2
Herring, C.D.3
Fehér, T.4
Pósfai, J.5
Blattner, F.R.6
Pósfai, G.7
-
16
-
-
84862239359
-
In the fast lane: large-scale bacterial genome engineering
-
16 Fehér, T., Burland, V., Pósfai, G., In the fast lane: large-scale bacterial genome engineering. J Biotechnol 160 (2012), 72–79.
-
(2012)
J Biotechnol
, vol.160
, pp. 72-79
-
-
Fehér, T.1
Burland, V.2
Pósfai, G.3
-
17
-
-
40549105706
-
Scarless engineering of the Escherichia coli genome
-
17 Fehér, T., Karcagi, I., Győrfy, Z., Umenhoffer, K., Csörgő, B., Pósfai, G., Scarless engineering of the Escherichia coli genome. Methods Mol Biol 416 (2008), 251–259.
-
(2008)
Methods Mol Biol
, vol.416
, pp. 251-259
-
-
Fehér, T.1
Karcagi, I.2
Győrfy, Z.3
Umenhoffer, K.4
Csörgő, B.5
Pósfai, G.6
-
18
-
-
34548264698
-
Systematic genome reductions: theoretical and experimental approaches
-
18 Fehér, T., Papp, B., Pál, C., Pósfai, G., Systematic genome reductions: theoretical and experimental approaches. Chem Revs 107 (2007), 3498–3513.
-
(2007)
Chem Revs
, vol.107
, pp. 3498-3513
-
-
Fehér, T.1
Papp, B.2
Pál, C.3
Pósfai, G.4
-
19
-
-
33846108255
-
Towards synthesis of a minimal cell
-
45-45
-
19 Forster, A.C., Church, G.M., Towards synthesis of a minimal cell. Mol Sys Biol, 2, 2006 45-45.
-
(2006)
Mol Sys Biol
, vol.2
-
-
Forster, A.C.1
Church, G.M.2
-
20
-
-
57549109461
-
Toward minimal bacterial cells: evolution vs. design
-
20 Moya, A., Gil, R., Latorre, A., Pereto, J., Pilar Garcillan-Barcia, M., de la Cruz, F., Toward minimal bacterial cells: evolution vs. design. FEMS Microbiol Rev 33 (2009), 225–235.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 225-235
-
-
Moya, A.1
Gil, R.2
Latorre, A.3
Pereto, J.4
Pilar Garcillan-Barcia, M.5
de la Cruz, F.6
-
21
-
-
58049139543
-
Synthetic biology: can we make biology easy to engineer?
-
21 Endy, D., Synthetic biology: can we make biology easy to engineer?. Ind Biotechnol 4 (2008), 340–351.
-
(2008)
Ind Biotechnol
, vol.4
, pp. 340-351
-
-
Endy, D.1
-
22
-
-
38949178112
-
Engineering complex phenotypes in industrial strains
-
22 Patnaik, R., Engineering complex phenotypes in industrial strains. Biotechnol Prog 24 (2008), 38–47.
-
(2008)
Biotechnol Prog
, vol.24
, pp. 38-47
-
-
Patnaik, R.1
-
23
-
-
84978808486
-
Lean-proteome strains — next step in metabolic engineering
-
23 Valgepea, K., Peebo, K., Adamberg, K., Vilu, R., Lean-proteome strains — next step in metabolic engineering. Front Bioeng Biotech, 3, 2015, 11.
-
(2015)
Front Bioeng Biotech
, vol.3
, pp. 11
-
-
Valgepea, K.1
Peebo, K.2
Adamberg, K.3
Vilu, R.4
-
24
-
-
84946746207
-
Chassis optimization as a cornerstone for the application of synthetic biology based strategies in microbial secondary metabolism
-
24 Beites, T., Mendes, M.V., Chassis optimization as a cornerstone for the application of synthetic biology based strategies in microbial secondary metabolism. Front Microbiol, 2015, 6.
-
(2015)
Front Microbiol
, pp. 6
-
-
Beites, T.1
Mendes, M.V.2
-
25
-
-
84943604629
-
Systems strategies for developing industrial microbial strains
-
25• Lee, S.Y., Kim, H.U., Systems strategies for developing industrial microbial strains. Nature Biotechnol 33 (2015), 1061–1072.
-
(2015)
Nature Biotechnol
, vol.33
, pp. 1061-1072
-
-
Lee, S.Y.1
Kim, H.U.2
-
26
-
-
84957428248
-
Minimal genome: worthwhile or worthless efforts toward being smaller?
-
26 Choe, D., Cho, S., Kim, S.C., Cho, B.K., Minimal genome: worthwhile or worthless efforts toward being smaller?. Biotechnol J 11 (2016), 199–211.
-
(2016)
Biotechnol J
, vol.11
, pp. 199-211
-
-
Choe, D.1
Cho, S.2
Kim, S.C.3
Cho, B.K.4
-
27
-
-
84982179570
-
Living factories of the future
-
27 Eisenstein, M., Living factories of the future. Nature 531 (2016), 401–403.
-
(2016)
Nature
, vol.531
, pp. 401-403
-
-
Eisenstein, M.1
-
28
-
-
73349139923
-
Synthesis of DNA fragments in yeast by one-step assembly of overlapping oligonucleotides
-
28 Gibson, D.G., Synthesis of DNA fragments in yeast by one-step assembly of overlapping oligonucleotides. Nucl Acids Res 37 (2009), 6984–6990.
-
(2009)
Nucl Acids Res
, vol.37
, pp. 6984-6990
-
-
Gibson, D.G.1
-
29
-
-
39449112551
-
Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium genome
-
29 Gibson, D.G., Benders, G.A., Andrews-Pfannkoch, C., Denisova, E.A., Baden-Tillson, H., Zaveri, J., Stockwell, T.B., Brownley, A., Thomas, D.W., Algire, M.A., et al. Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium genome. Science 319 (2008), 1215–1220.
-
(2008)
Science
, vol.319
, pp. 1215-1220
-
-
Gibson, D.G.1
Benders, G.A.2
Andrews-Pfannkoch, C.3
Denisova, E.A.4
Baden-Tillson, H.5
Zaveri, J.6
Stockwell, T.B.7
Brownley, A.8
Thomas, D.W.9
Algire, M.A.10
-
30
-
-
58149510036
-
One-step assembly in yeast of 25 overlapping DNA fragments to form a complete synthetic Mycoplasma genitalium genome
-
30 Gibson, D.G., Benders, G.A., Axelrod, K.C., Zaveri, J., Algire, M.A., Moodie, M., Montague, M.G., Venter, J.C., Smith, H.O., Hutchison, C.A. 3rd, One-step assembly in yeast of 25 overlapping DNA fragments to form a complete synthetic Mycoplasma genitalium genome. Proc Natl Acad Sci USA 105 (2008), 20404–20409.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 20404-20409
-
-
Gibson, D.G.1
Benders, G.A.2
Axelrod, K.C.3
Zaveri, J.4
Algire, M.A.5
Moodie, M.6
Montague, M.G.7
Venter, J.C.8
Smith, H.O.9
Hutchison, C.A.10
-
31
-
-
70349324305
-
Creating bacterial strains from genomes that have been cloned and engineered in yeast
-
31 Lartigue, C., Vashee, S., Algire, M.A., Chuang, R.Y., Benders, G.A., Ma, L., Noskov, V.N., Denisova, E.A., Gibson, D.G., Assad-Garcia, N., et al. Creating bacterial strains from genomes that have been cloned and engineered in yeast. Science 325 (2009), 1693–1696.
-
(2009)
Science
, vol.325
, pp. 1693-1696
-
-
Lartigue, C.1
Vashee, S.2
Algire, M.A.3
Chuang, R.Y.4
Benders, G.A.5
Ma, L.6
Noskov, V.N.7
Denisova, E.A.8
Gibson, D.G.9
Assad-Garcia, N.10
-
32
-
-
84923864848
-
Bacterial genome reduction using the progressive clustering of deletions via yeast sexual cycling
-
The paper reports an original method for genome editing and eventual minimization using yeast as a mothership.
-
32•• Suzuki, Y., Assad-Garcia, N., Kostylev, M., Noskov, V.N., Wise, K.S., Karas, B.J., Stam, J., Montague, M.G., Hanly, T.J., Enriquez, N.J., et al. Bacterial genome reduction using the progressive clustering of deletions via yeast sexual cycling. Genome Res 25 (2015), 435–444 The paper reports an original method for genome editing and eventual minimization using yeast as a mothership.
-
(2015)
Genome Res
, vol.25
, pp. 435-444
-
-
Suzuki, Y.1
Assad-Garcia, N.2
Kostylev, M.3
Noskov, V.N.4
Wise, K.S.5
Karas, B.J.6
Stam, J.7
Montague, M.G.8
Hanly, T.J.9
Enriquez, N.J.10
-
33
-
-
84984873734
-
CasHRA (Cas9-facilitated Homologous Recombination Assembly) method of constructing megabase-sized DNA
-
33• Zhou, J., Wu, R., Xue, X., Qin, Z., CasHRA (Cas9-facilitated Homologous Recombination Assembly) method of constructing megabase-sized DNA. Nucl Acids Res, 44, 2016, e124.
-
(2016)
Nucl Acids Res
, vol.44
, pp. e124
-
-
Zhou, J.1
Wu, R.2
Xue, X.3
Qin, Z.4
-
34
-
-
84930901426
-
Minimum genome factories in Schizosaccharomyces pombe
-
H. Anazawa S. Shimizu Springer (Japan)
-
34 Kumagai, H., Sasaki, M., Idiris, A., Tohda, H., Minimum genome factories in Schizosaccharomyces pombe. Anazawa, H., Shimizu, S., (eds.) Microbial Production: From Genome Design to Cell Engineering, 2014, Springer (Japan), 17–24.
-
(2014)
Microbial Production: From Genome Design to Cell Engineering
, pp. 17-24
-
-
Kumagai, H.1
Sasaki, M.2
Idiris, A.3
Tohda, H.4
-
35
-
-
84897581176
-
Total synthesis of a functional designer eukaryotic chromosome
-
35 Annaluru, N., Muller, H., Mitchell, L.A., Ramalingam, S., Stracquadanio, G., Richardson, S.M., Dymond, J.S., Kuang, Z., Scheifele, L.Z., Cooper, E.M., Total synthesis of a functional designer eukaryotic chromosome. Science 344 (2014), 55–58.
-
(2014)
Science
, vol.344
, pp. 55-58
-
-
Annaluru, N.1
Muller, H.2
Mitchell, L.A.3
Ramalingam, S.4
Stracquadanio, G.5
Richardson, S.M.6
Dymond, J.S.7
Kuang, Z.8
Scheifele, L.Z.9
Cooper, E.M.10
-
36
-
-
80053132391
-
Synthetic chromosome arms function in yeast and generate phenotypic diversity by design
-
36 Dymond, J.S., Richardson, S.M., Coombes, C.E., Babatz, T., Muller, H., Annaluru, N., Blake, W.J., Schwerzmann, J.W., Dai, J., Lindstrom, D.L., et al. Synthetic chromosome arms function in yeast and generate phenotypic diversity by design. Nature 477 (2011), 471–476.
-
(2011)
Nature
, vol.477
, pp. 471-476
-
-
Dymond, J.S.1
Richardson, S.M.2
Coombes, C.E.3
Babatz, T.4
Muller, H.5
Annaluru, N.6
Blake, W.J.7
Schwerzmann, J.W.8
Dai, J.9
Lindstrom, D.L.10
-
37
-
-
84970002464
-
Indispensability of horizontally transferred genes and its impact on bacterial genome streamlining
-
37• Karcagi, I., Draskovits, G., Umenhoffer, K., Fekete, G., Kovacs, K., Mehi, O., Baliko, G., Szappanos, B., Gyorfy, Z., Feher, T., et al. Indispensability of horizontally transferred genes and its impact on bacterial genome streamlining. Mol Biol Evol 33 (2016), 1257–1269.
-
(2016)
Mol Biol Evol
, vol.33
, pp. 1257-1269
-
-
Karcagi, I.1
Draskovits, G.2
Umenhoffer, K.3
Fekete, G.4
Kovacs, K.5
Mehi, O.6
Baliko, G.7
Szappanos, B.8
Gyorfy, Z.9
Feher, T.10
-
38
-
-
19944431737
-
Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome
-
38 Hashimoto, M., Ichimura, T., Mizoguchi, H., Tanaka, K., Fujimitsu, K., Keyamura, K., Ote, T., Yamakawa, T., Yamazaki, Y., Mori, H., Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome. Mol Microbiol 55 (2005), 137–149.
-
(2005)
Mol Microbiol
, vol.55
, pp. 137-149
-
-
Hashimoto, M.1
Ichimura, T.2
Mizoguchi, H.3
Tanaka, K.4
Fujimitsu, K.5
Keyamura, K.6
Ote, T.7
Yamakawa, T.8
Yamazaki, Y.9
Mori, H.10
-
39
-
-
84934912204
-
MEGA (Multiple Essential Genes Assembling) deletion and replacement method for genome reduction in Escherichia coli
-
Astute stratagem to avoid the problem of deleting essential genes in long genomic segments of Escherichia coli.
-
39•• Xue, X., Wang, T., Jiang, P., Shao, Y., Zhou, M., Zhong, L., Wu, R., Zhou, J., Xia, H., Zhao, G., MEGA (Multiple Essential Genes Assembling) deletion and replacement method for genome reduction in Escherichia coli. ACS Synth Biol 4 (2014), 700–706 Astute stratagem to avoid the problem of deleting essential genes in long genomic segments of Escherichia coli.
-
(2014)
ACS Synth Biol
, vol.4
, pp. 700-706
-
-
Xue, X.1
Wang, T.2
Jiang, P.3
Shao, Y.4
Zhou, M.5
Zhong, L.6
Wu, R.7
Zhou, J.8
Xia, H.9
Zhao, G.10
-
40
-
-
84857114878
-
Low-mutation-rate, reduced-genome Escherichia coli: an improved host for faithful maintenance of engineered genetic constructs
-
40 Csörgő, B., Fehér, T., Tímár, E., Blattner, F.R., Pósfai, G., Low-mutation-rate, reduced-genome Escherichia coli: an improved host for faithful maintenance of engineered genetic constructs. Microb Cell Fact, 11, 2012, 1.
-
(2012)
Microb Cell Fact
, vol.11
, pp. 1
-
-
Csörgő, B.1
Fehér, T.2
Tímár, E.3
Blattner, F.R.4
Pósfai, G.5
-
41
-
-
33646722147
-
Emergent properties of reduced-genome Escherichia coli
-
41 Pósfai, G., Plunkett, G., Fehér, T., Frisch, D., Keil, G.M., Umenhoffer, K., Kolisnychenko, V., Stahl, B., Sharma, S.S., De Arruda, M., Emergent properties of reduced-genome Escherichia coli. Science 312 (2006), 1044–1046.
-
(2006)
Science
, vol.312
, pp. 1044-1046
-
-
Pósfai, G.1
Plunkett, G.2
Fehér, T.3
Frisch, D.4
Keil, G.M.5
Umenhoffer, K.6
Kolisnychenko, V.7
Stahl, B.8
Sharma, S.S.9
De Arruda, M.10
-
42
-
-
77952456525
-
Reduced evolvability of Escherichia coli MDS42, an IS-less cellular chassis for molecular and synthetic biology applications
-
42 Umenhoffer, K., Fehér, T., Balikó, G., Ayaydin, F., Pósfai, J., Blattner, F.R., Pósfai, G., Reduced evolvability of Escherichia coli MDS42, an IS-less cellular chassis for molecular and synthetic biology applications. Microb Cell Fact 9 (2010), 1–12.
-
(2010)
Microb Cell Fact
, vol.9
, pp. 1-12
-
-
Umenhoffer, K.1
Fehér, T.2
Balikó, G.3
Ayaydin, F.4
Pósfai, J.5
Blattner, F.R.6
Pósfai, G.7
-
43
-
-
84878186034
-
Genetic manipulations restored the growth fitness of reduced-genome Escherichia coli
-
43 Hirokawa, Y., Kawano, H., Tanaka-Masuda, K., Nakamura, N., Nakagawa, A., Ito, M., Mori, H., Oshima, T., Ogasawara, N., Genetic manipulations restored the growth fitness of reduced-genome Escherichia coli. J Biosci Bioeng 116 (2013), 52–58.
-
(2013)
J Biosci Bioeng
, vol.116
, pp. 52-58
-
-
Hirokawa, Y.1
Kawano, H.2
Tanaka-Masuda, K.3
Nakamura, N.4
Nakagawa, A.5
Ito, M.6
Mori, H.7
Oshima, T.8
Ogasawara, N.9
-
44
-
-
84897385204
-
A reduced genome decreases the host carrying capacity for foreign DNA
-
44 Akeno, Y., Ying, B.-W., Tsuru, S., Yomo, T., A reduced genome decreases the host carrying capacity for foreign DNA. Microb Cell Fact, 13, 2014, 1.
-
(2014)
Microb Cell Fact
, vol.13
, pp. 1
-
-
Akeno, Y.1
Ying, B.-W.2
Tsuru, S.3
Yomo, T.4
-
45
-
-
84958109894
-
Multiplexed engineering in biology
-
45 Rogers, J.K., Church, G.M., Multiplexed engineering in biology. Trends Biotechnol 34 (2016), 198–206.
-
(2016)
Trends Biotechnol
, vol.34
, pp. 198-206
-
-
Rogers, J.K.1
Church, G.M.2
-
46
-
-
68949161807
-
Programming cells by multiplex genome engineering and accelerated evolution
-
46 Wang, H.H., Isaacs, F.J., Carr, P.A., Sun, Z.Z., Xu, G., Forest, C.R., Church, G.M., Programming cells by multiplex genome engineering and accelerated evolution. Nature 460 (2009), 894–898.
-
(2009)
Nature
, vol.460
, pp. 894-898
-
-
Wang, H.H.1
Isaacs, F.J.2
Carr, P.A.3
Sun, Z.Z.4
Xu, G.5
Forest, C.R.6
Church, G.M.7
-
47
-
-
84959418965
-
A highly precise and portable genome engineering method allows comparison of mutational effects across bacterial species
-
47• Nyerges, A., Csorgo, B., Nagy, I., Balint, B., Bihari, P., Lazar, V., Apjok, G., Umenhoffer, K., Bogos, B., Posfai, G., et al. A highly precise and portable genome engineering method allows comparison of mutational effects across bacterial species. Proc Natl Acad Sci USA 113 (2016), 2502–2507.
-
(2016)
Proc Natl Acad Sci USA
, vol.113
, pp. 2502-2507
-
-
Nyerges, A.1
Csorgo, B.2
Nagy, I.3
Balint, B.4
Bihari, P.5
Lazar, V.6
Apjok, G.7
Umenhoffer, K.8
Bogos, B.9
Posfai, G.10
-
48
-
-
84899861853
-
Conditional DNA repair mutants enable highly precise genome engineering
-
48 Nyerges, A., Csorgo, B., Nagy, I., Latinovics, D., Szamecz, B., Posfai, G., Pal, C., Conditional DNA repair mutants enable highly precise genome engineering. Nucl Acids Res, 42, 2014, e62.
-
(2014)
Nucl Acids Res
, vol.42
, pp. e62
-
-
Nyerges, A.1
Csorgo, B.2
Nagy, I.3
Latinovics, D.4
Szamecz, B.5
Posfai, G.6
Pal, C.7
-
49
-
-
84949524121
-
Seven gene deletions in seven days: fast generation of Escherichia coli strains tolerant to acetate and osmotic stress
-
49 Jensen, S.I., Lennen, R.M., Herrgard, M.J., Nielsen, A.T., Seven gene deletions in seven days: fast generation of Escherichia coli strains tolerant to acetate and osmotic stress. Sci Rep, 5, 2015, 17874.
-
(2015)
Sci Rep
, vol.5
, pp. 17874
-
-
Jensen, S.I.1
Lennen, R.M.2
Herrgard, M.J.3
Nielsen, A.T.4
-
50
-
-
79960502359
-
Precise manipulation of chromosomes in vivo enables genome-wide codon replacement
-
The power of MAGE at its best: emancipation of one STOP codon from its naturally evolved meaning.
-
50•• Isaacs, F.J., Carr, P.A., Wang, H.H., Lajoie, M.J., Sterling, B., Kraal, L., Tolonen, A.C., Gianoulis, T.A., Goodman, D.B., Reppas, N.B., Precise manipulation of chromosomes in vivo enables genome-wide codon replacement. Science 333 (2011), 348–353 The power of MAGE at its best: emancipation of one STOP codon from its naturally evolved meaning.
-
(2011)
Science
, vol.333
, pp. 348-353
-
-
Isaacs, F.J.1
Carr, P.A.2
Wang, H.H.3
Lajoie, M.J.4
Sterling, B.5
Kraal, L.6
Tolonen, A.C.7
Gianoulis, T.A.8
Goodman, D.B.9
Reppas, N.B.10
-
51
-
-
84885791219
-
Genomically recoded organisms expand biological functions
-
51 Lajoie, M.J., Rovner, A.J., Goodman, D.B., Aerni, H.R., Haimovich, A.D., Kuznetsov, G., Mercer, J.A., Wang, H.H., Carr, P.A., Mosberg, J.A., et al. Genomically recoded organisms expand biological functions. Science 342 (2013), 357–360.
-
(2013)
Science
, vol.342
, pp. 357-360
-
-
Lajoie, M.J.1
Rovner, A.J.2
Goodman, D.B.3
Aerni, H.R.4
Haimovich, A.D.5
Kuznetsov, G.6
Mercer, J.A.7
Wang, H.H.8
Carr, P.A.9
Mosberg, J.A.10
-
52
-
-
84926003341
-
Precise manipulation of bacterial chromosomes by conjugative assembly genome engineering
-
52• Ma, N.J., Moonan, D.W., Isaacs, F.J., Precise manipulation of bacterial chromosomes by conjugative assembly genome engineering. Nat Protocol 9 (2014), 2285–2300.
-
(2014)
Nat Protocol
, vol.9
, pp. 2285-2300
-
-
Ma, N.J.1
Moonan, D.W.2
Isaacs, F.J.3
-
53
-
-
84874608929
-
RNA-guided editing of bacterial genomes using CRISPR-Cas systems
-
53 Jiang, W., Bikard, D., Cox, D., Zhang, F., Marraffini, L.A., RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nature Biotech 31 (2013), 233–239.
-
(2013)
Nature Biotech
, vol.31
, pp. 233-239
-
-
Jiang, W.1
Bikard, D.2
Cox, D.3
Zhang, F.4
Marraffini, L.A.5
-
54
-
-
84947930171
-
Exploiting CRISPR-Cas immune systems for genome editing in bacteria
-
54 Barrangou, R., van Pijkeren, J.P., Exploiting CRISPR-Cas immune systems for genome editing in bacteria. Curr Opin Biotechnol 37 (2016), 61–68.
-
(2016)
Curr Opin Biotechnol
, vol.37
, pp. 61-68
-
-
Barrangou, R.1
van Pijkeren, J.P.2
-
55
-
-
84952682854
-
CRISPR/Cas9 advances engineering of microbial cell factories
-
55 Jakociunas, T., Jensen, M.K., Keasling, J.D., CRISPR/Cas9 advances engineering of microbial cell factories. Metab Eng 34 (2016), 44–59.
-
(2016)
Metab Eng
, vol.34
, pp. 44-59
-
-
Jakociunas, T.1
Jensen, M.K.2
Keasling, J.D.3
-
56
-
-
84955464550
-
CRMAGE: CRISPR Optimized MAGE Recombineering
-
56 Ronda, C., Pedersen, L.E., Sommer, M.O., Nielsen, A.T., CRMAGE: CRISPR Optimized MAGE Recombineering. Sci Rep, 6, 2016, 19452.
-
(2016)
Sci Rep
, vol.6
, pp. 19452
-
-
Ronda, C.1
Pedersen, L.E.2
Sommer, M.O.3
Nielsen, A.T.4
-
57
-
-
77649198707
-
Spatial and topological organization of DNA chains induced by gene co-localization
-
57 Junier, I., Martin, O., Kepes, F., Spatial and topological organization of DNA chains induced by gene co-localization. PLoS Comput Biol, 6, 2010, e1000678.
-
(2010)
PLoS Comput Biol
, vol.6
, pp. e1000678
-
-
Junier, I.1
Martin, O.2
Kepes, F.3
-
58
-
-
0345596373
-
The map of the cell is in the chromosome
-
58 Danchin, A., Henaut, A., The map of the cell is in the chromosome. Curr Opin Genet Dev 7 (1997), 852–854.
-
(1997)
Curr Opin Genet Dev
, vol.7
, pp. 852-854
-
-
Danchin, A.1
Henaut, A.2
-
59
-
-
0035282861
-
Bringing gene order into bacterial shape
-
59 Tamames, J., Gonzalez-Moreno, M., Mingorance, J., Valencia, A., Vicente, M., Bringing gene order into bacterial shape. Trends Genet 17 (2001), 124–126.
-
(2001)
Trends Genet
, vol.17
, pp. 124-126
-
-
Tamames, J.1
Gonzalez-Moreno, M.2
Mingorance, J.3
Valencia, A.4
Vicente, M.5
-
60
-
-
33749257121
-
The selective value of bacterial shape
-
60 Young, K.D., The selective value of bacterial shape. Microbiol Mol Biol Revs 70 (2006), 660–703.
-
(2006)
Microbiol Mol Biol Revs
, vol.70
, pp. 660-703
-
-
Young, K.D.1
-
61
-
-
84863629060
-
The layout of a bacterial genome
-
61 Kepes, F., Jester, B.C., Lepage, T., Rafiei, N., Rosu, B., Junier, I., The layout of a bacterial genome. FEBS Lett 586 (2012), 2043–2048.
-
(2012)
FEBS Lett
, vol.586
, pp. 2043-2048
-
-
Kepes, F.1
Jester, B.C.2
Lepage, T.3
Rafiei, N.4
Rosu, B.5
Junier, I.6
-
62
-
-
0028829125
-
The minimal gene complement of Mycoplasma genitalium
-
62 Fraser, C.M., Gocayne, J.D., White, O., Adams, M.D., Clayton, R.A., Fleischmann, R.D., Bult, C.J., Kerlavage, A.R., Sutton, G., Kelley, J.M., et al. The minimal gene complement of Mycoplasma genitalium. Science 270 (1995), 397–403.
-
(1995)
Science
, vol.270
, pp. 397-403
-
-
Fraser, C.M.1
Gocayne, J.D.2
White, O.3
Adams, M.D.4
Clayton, R.A.5
Fleischmann, R.D.6
Bult, C.J.7
Kerlavage, A.R.8
Sutton, G.9
Kelley, J.M.10
-
63
-
-
70849119931
-
Transcriptome complexity in a genome-reduced bacterium
-
63 Guell, M., van Noort, V., Yus, E., Chen, W.H., Leigh-Bell, J., Michalodimitrakis, K., Yamada, T., Arumugam, M., Doerks, T., Kuhner, S., et al. Transcriptome complexity in a genome-reduced bacterium. Science 326 (2009), 1268–1271.
-
(2009)
Science
, vol.326
, pp. 1268-1271
-
-
Guell, M.1
van Noort, V.2
Yus, E.3
Chen, W.H.4
Leigh-Bell, J.5
Michalodimitrakis, K.6
Yamada, T.7
Arumugam, M.8
Doerks, T.9
Kuhner, S.10
-
64
-
-
84922945647
-
Defining a minimal cell: essentiality of small ORFs and ncRNAs in a genome-reduced bacterium
-
64• Lluch-Senar, M., Delgado, J., Chen, W.H., Llorens-Rico, V., O'Reilly, F.J., Wodke, J.A., Unal, E.B., Yus, E., Martinez, S., Nichols, R.J., et al. Defining a minimal cell: essentiality of small ORFs and ncRNAs in a genome-reduced bacterium. Mol Syst Biol, 11, 2015, 780.
-
(2015)
Mol Syst Biol
, vol.11
, pp. 780
-
-
Lluch-Senar, M.1
Delgado, J.2
Chen, W.H.3
Llorens-Rico, V.4
O'Reilly, F.J.5
Wodke, J.A.6
Unal, E.B.7
Yus, E.8
Martinez, S.9
Nichols, R.J.10
-
65
-
-
79960578471
-
Quantification of mRNA and protein and integration with protein turnover in a bacterium
-
65 Maier, T., Schmidt, A., Guell, M., Kuhner, S., Gavin, A.C., Aebersold, R., Serrano, L., Quantification of mRNA and protein and integration with protein turnover in a bacterium. Mol Syst Biol, 7, 2011, 511.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 511
-
-
Maier, T.1
Schmidt, A.2
Guell, M.3
Kuhner, S.4
Gavin, A.C.5
Aebersold, R.6
Serrano, L.7
-
66
-
-
84876590179
-
Dissecting the energy metabolism in Mycoplasma pneumoniae through genome-scale metabolic modeling
-
66 Wodke, J.A., Puchalka, J., Lluch-Senar, M., Marcos, J., Yus, E., Godinho, M., Gutierrez-Gallego, R., dos Santos, V.A., Serrano, L., Klipp, E., et al. Dissecting the energy metabolism in Mycoplasma pneumoniae through genome-scale metabolic modeling. Mol Syst Biol, 9, 2013, 653.
-
(2013)
Mol Syst Biol
, vol.9
, pp. 653
-
-
Wodke, J.A.1
Puchalka, J.2
Lluch-Senar, M.3
Marcos, J.4
Yus, E.5
Godinho, M.6
Gutierrez-Gallego, R.7
dos Santos, V.A.8
Serrano, L.9
Klipp, E.10
-
67
-
-
70849102021
-
Impact of genome reduction on bacterial metabolism and its regulation
-
67 Yus, E., Maier, T., Michalodimitrakis, K., van Noort, V., Yamada, T., Chen, W.H., Wodke, J.A., Guell, M., Martinez, S., Bourgeois, R., et al. Impact of genome reduction on bacterial metabolism and its regulation. Science 326 (2009), 1263–1268.
-
(2009)
Science
, vol.326
, pp. 1263-1268
-
-
Yus, E.1
Maier, T.2
Michalodimitrakis, K.3
van Noort, V.4
Yamada, T.5
Chen, W.H.6
Wodke, J.A.7
Guell, M.8
Martinez, S.9
Bourgeois, R.10
-
68
-
-
70849132924
-
Proteome organization in a genome-reduced bacterium
-
68 Kuhner, S., van Noort, V., Betts, M.J., Leo-Macias, A., Batisse, C., Rode, M., Yamada, T., Maier, T., Bader, S., Beltran-Alvarez, P., et al. Proteome organization in a genome-reduced bacterium. Science 326 (2009), 1235–1240.
-
(2009)
Science
, vol.326
, pp. 1235-1240
-
-
Kuhner, S.1
van Noort, V.2
Betts, M.J.3
Leo-Macias, A.4
Batisse, C.5
Rode, M.6
Yamada, T.7
Maier, T.8
Bader, S.9
Beltran-Alvarez, P.10
-
69
-
-
84864258618
-
A whole-cell computational model predicts phenotype from genotype
-
69 Karr, J.R., Sanghvi, J.C., Macklin, D.N., Gutschow, M.V., Jacobs, J.M., Bolival, B. Jr, Assad-Garcia, N., Glass, J.I., Covert, M.W., A whole-cell computational model predicts phenotype from genotype. Cell 150 (2012), 389–401.
-
(2012)
Cell
, vol.150
, pp. 389-401
-
-
Karr, J.R.1
Sanghvi, J.C.2
Macklin, D.N.3
Gutschow, M.V.4
Jacobs, J.M.5
Bolival, B.6
Assad-Garcia, N.7
Glass, J.I.8
Covert, M.W.9
-
70
-
-
31044439550
-
Essential genes of a minimal bacterium
-
70 Glass, J.I., Assad-Garcia, N., Alperovich, N., Yooseph, S., Lewis, M.R., Maruf, M., Hutchison, C.A. 3rd, Smith, H.O., Venter, J.C., Essential genes of a minimal bacterium. Proc Natl Acad Sci USA 103 (2006), 425–430.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 425-430
-
-
Glass, J.I.1
Assad-Garcia, N.2
Alperovich, N.3
Yooseph, S.4
Lewis, M.R.5
Maruf, M.6
Hutchison, C.A.7
Smith, H.O.8
Venter, J.C.9
-
71
-
-
0032764518
-
Global transposon mutagenesis and a minimal Mycoplasma genome
-
71 Hutchison, C.A., Peterson, S.N., Gill, S.R., Cline, R.T., White, O., Fraser, C.M., Smith, H.O., Venter, J.C., Global transposon mutagenesis and a minimal Mycoplasma genome. Science 286 (1999), 2165–2169.
-
(1999)
Science
, vol.286
, pp. 2165-2169
-
-
Hutchison, C.A.1
Peterson, S.N.2
Gill, S.R.3
Cline, R.T.4
White, O.5
Fraser, C.M.6
Smith, H.O.7
Venter, J.C.8
-
72
-
-
77953584054
-
Creation of a bacterial cell controlled by a chemically synthesized genome
-
72 Gibson, D.G., Glass, J.I., Lartigue, C., Noskov, V.N., Chuang, R.Y., Algire, M.A., Benders, G.A., Montague, M.G., Ma, L., Moodie, M.M., et al. Creation of a bacterial cell controlled by a chemically synthesized genome. Science 329 (2010), 52–56.
-
(2010)
Science
, vol.329
, pp. 52-56
-
-
Gibson, D.G.1
Glass, J.I.2
Lartigue, C.3
Noskov, V.N.4
Chuang, R.Y.5
Algire, M.A.6
Benders, G.A.7
Montague, M.G.8
Ma, L.9
Moodie, M.M.10
-
73
-
-
84962227074
-
Design and synthesis of a minimal bacterial genome
-
aad6253 Thorough inspection and deployment of the minimal number of genes that originate a living system. Probably a landmark in the history of Biology.
-
73•• Hutchison, C.A. 3rd, Chuang, R.Y., Noskov, V.N., Assad-Garcia, N., Deerinck, T.J., Ellisman, M.H., Gill, J., Kannan, K., Karas, B.J., Ma, L., et al. Design and synthesis of a minimal bacterial genome. Science, 351, 2016 aad6253 Thorough inspection and deployment of the minimal number of genes that originate a living system. Probably a landmark in the history of Biology.
-
(2016)
Science
, vol.351
-
-
Hutchison, C.A.1
Chuang, R.Y.2
Noskov, V.N.3
Assad-Garcia, N.4
Deerinck, T.J.5
Ellisman, M.H.6
Gill, J.7
Kannan, K.8
Karas, B.J.9
Ma, L.10
-
74
-
-
79957974091
-
Life's demons: information and order in biology
-
74 Binder, P.M., Danchin, A., Life's demons: information and order in biology. EMBO Reps 12 (2011), 495–499.
-
(2011)
EMBO Reps
, vol.12
, pp. 495-499
-
-
Binder, P.M.1
Danchin, A.2
-
75
-
-
84983283570
-
Unknown unknowns: essential genes in quest for function
-
75• Danchin, A., Fang, G., Unknown unknowns: essential genes in quest for function. Microbiol Biotech 9 (2016), 530–540.
-
(2016)
Microbiol Biotech
, vol.9
, pp. 530-540
-
-
Danchin, A.1
Fang, G.2
-
76
-
-
60149089263
-
Life without a wall or division machine in Bacillus subtilis
-
76 Leaver, M., Dominguez-Cuevas, P., Coxhead, J.M., Daniel, R.A., Errington, J., Life without a wall or division machine in Bacillus subtilis. Nature 457 (2009), 849–853.
-
(2009)
Nature
, vol.457
, pp. 849-853
-
-
Leaver, M.1
Dominguez-Cuevas, P.2
Coxhead, J.M.3
Daniel, R.A.4
Errington, J.5
-
77
-
-
84986919095
-
Wall proficient E. coli capable of sustained growth in the absence of the Z-ring division machine
-
Evidence that the division machinery of bacteria is not necessary for cell viability.
-
77•• Mercier, R., Kawai, Y., Errington, J., Wall proficient E. coli capable of sustained growth in the absence of the Z-ring division machine. Nature Microbiol, 1, 2016, 16091 Evidence that the division machinery of bacteria is not necessary for cell viability.
-
(2016)
Nature Microbiol
, vol.1
, pp. 16091
-
-
Mercier, R.1
Kawai, Y.2
Errington, J.3
-
78
-
-
84874768439
-
Excess membrane synthesis drives a primitive mode of cell proliferation
-
78 Mercier, R., Kawai, Y., Errington, J., Excess membrane synthesis drives a primitive mode of cell proliferation. Cell 152 (2013), 997–1007.
-
(2013)
Cell
, vol.152
, pp. 997-1007
-
-
Mercier, R.1
Kawai, Y.2
Errington, J.3
-
79
-
-
84874762447
-
L-form bacteria, cell walls and the origins of life
-
79 Errington, J., L-form bacteria, cell walls and the origins of life. Open Biol, 3, 2013, 120143.
-
(2013)
Open Biol
, vol.3
, pp. 120143
-
-
Errington, J.1
-
80
-
-
84869117583
-
How did bacterial ancestors reproduce? Lessons from L-form cells and giant lipid vesicles: multiplication similarities between lipid vesicles and L-form bacteria
-
80 Briers, Y., Walde, P., Schuppler, M., Loessner, M.J., How did bacterial ancestors reproduce? Lessons from L-form cells and giant lipid vesicles: multiplication similarities between lipid vesicles and L-form bacteria. BioEssays 34 (2012), 1078–1084.
-
(2012)
BioEssays
, vol.34
, pp. 1078-1084
-
-
Briers, Y.1
Walde, P.2
Schuppler, M.3
Loessner, M.J.4
-
81
-
-
84874608123
-
A metabolic prototype for eliminating tryptophan from the genetic code
-
81 Pezo, V., Louis, D., Guerineau, V., Le Caer, J.P., Gaillon, L., Mutzel, R., Marliere, P., A metabolic prototype for eliminating tryptophan from the genetic code. Sci Rep, 3, 2013, 1359.
-
(2013)
Sci Rep
, vol.3
, pp. 1359
-
-
Pezo, V.1
Louis, D.2
Guerineau, V.3
Le Caer, J.P.4
Gaillon, L.5
Mutzel, R.6
Marliere, P.7
-
82
-
-
84960803975
-
Overcoming challenges in engineering the genetic code
-
82 Lajoie, M.J., Soll, D., Church, G.M., Overcoming challenges in engineering the genetic code. J Mol Biol 428 (2016), 1004–1021.
-
(2016)
J Mol Biol
, vol.428
, pp. 1004-1021
-
-
Lajoie, M.J.1
Soll, D.2
Church, G.M.3
-
83
-
-
84983523350
-
Design, synthesis, and testing toward a 57-codon genome
-
83• Ostrov, N., Landon, M., Guell, M., Kuznetsov, G., Teramoto, J., Cervantes, N., Zhou, M., Singh, K., Napolitano, M.G., Moosburner, M., et al. Design, synthesis, and testing toward a 57-codon genome. Science 353 (2016), 819–822.
-
(2016)
Science
, vol.353
, pp. 819-822
-
-
Ostrov, N.1
Landon, M.2
Guell, M.3
Kuznetsov, G.4
Teramoto, J.5
Cervantes, N.6
Zhou, M.7
Singh, K.8
Napolitano, M.G.9
Moosburner, M.10
-
84
-
-
84988351406
-
Assembly of radically recoded E. coli genome segments. bioRxiv
-
84• Norville, J.E., Gardner, C.L., Aponte, E., Camplisson, C.K., Gonzales, A., Barclay, D.K., Turner, K.A., Longe, V., Mincheva, M., Teramoto, J., et al. Assembly of radically recoded E. coli genome segments. bioRxiv. 2016, 10.1101/070417.
-
(2016)
-
-
Norville, J.E.1
Gardner, C.L.2
Aponte, E.3
Camplisson, C.K.4
Gonzales, A.5
Barclay, D.K.6
Turner, K.A.7
Longe, V.8
Mincheva, M.9
Teramoto, J.10
-
85
-
-
84930336873
-
Engineered ribosomal RNA operon copy-number variants of E. coli reveal the evolutionary trade-offs shaping rRNA operon number
-
85 Gyorfy, Z., Draskovits, G., Vernyik, V., Blattner, F.F., Gaal, T., Posfai, G., Engineered ribosomal RNA operon copy-number variants of E. coli reveal the evolutionary trade-offs shaping rRNA operon number. Nucl Acids Res 43 (2015), 1783–1794.
-
(2015)
Nucl Acids Res
, vol.43
, pp. 1783-1794
-
-
Gyorfy, Z.1
Draskovits, G.2
Vernyik, V.3
Blattner, F.F.4
Gaal, T.5
Posfai, G.6
-
86
-
-
84858279030
-
Construction of microbial cell factories for industrial bioprocesses
-
86 Sauer, M., Mattanovich, D., Construction of microbial cell factories for industrial bioprocesses. J Chem Technol Biotechnol 87 (2012), 445–450.
-
(2012)
J Chem Technol Biotechnol
, vol.87
, pp. 445-450
-
-
Sauer, M.1
Mattanovich, D.2
-
87
-
-
77951134703
-
A functional metagenomic approach for expanding the synthetic biology toolbox for biomass conversion
-
87 Sommer, M.O., Church, G.M., Dantas, G., A functional metagenomic approach for expanding the synthetic biology toolbox for biomass conversion. Mol Syst Biol, 6, 2010, 360.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 360
-
-
Sommer, M.O.1
Church, G.M.2
Dantas, G.3
-
88
-
-
78650003023
-
Genes that move the window of viability of life: lessons from bacteria thriving at the cold extreme
-
88 de Lorenzo, V., Genes that move the window of viability of life: lessons from bacteria thriving at the cold extreme. BioEssays 33 (2011), 38–42.
-
(2011)
BioEssays
, vol.33
, pp. 38-42
-
-
de Lorenzo, V.1
-
89
-
-
84988433165
-
Synthetic biology for vaccines
-
89 Vashee, S., Synthetic biology for vaccines. Int Innov 161 (2014), 100–102.
-
(2014)
Int Innov
, vol.161
, pp. 100-102
-
-
Vashee, S.1
-
90
-
-
84932150341
-
Bacillus subtilis and Escherichia coli essential genes and minimal cell factories after one decade of genome engineering
-
90 Juhas, M., Reuss, D.R., Zhu, B., Commichau, F.M., Bacillus subtilis and Escherichia coli essential genes and minimal cell factories after one decade of genome engineering. Microbiology 160 (2014), 2341–2351.
-
(2014)
Microbiology
, vol.160
, pp. 2341-2351
-
-
Juhas, M.1
Reuss, D.R.2
Zhu, B.3
Commichau, F.M.4
-
91
-
-
84872143710
-
Bacillus subtilis: from soil bacterium to super-secreting cell factory
-
91 van Dijl, J.M., Hecker, M., Bacillus subtilis: from soil bacterium to super-secreting cell factory. Microb Cell Fact, 12, 2013, 1.
-
(2013)
Microb Cell Fact
, vol.12
, pp. 1
-
-
van Dijl, J.M.1
Hecker, M.2
-
92
-
-
0347986769
-
Genome engineering reveals large dispensable regions in Bacillus subtilis
-
92 Westers, H., Dorenbos, R., van Dijl, J.M., Kabel, J., Flanagan, T., Devine, K.M., Jude, F., Séror, S.J., Beekman, A.C., Darmon, E., Genome engineering reveals large dispensable regions in Bacillus subtilis. Mol Biol Evol 20 (2003), 2076–2090.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 2076-2090
-
-
Westers, H.1
Dorenbos, R.2
van Dijl, J.M.3
Kabel, J.4
Flanagan, T.5
Devine, K.M.6
Jude, F.7
Séror, S.J.8
Beekman, A.C.9
Darmon, E.10
-
93
-
-
84871769668
-
Building the repertoire of dispensable chromosome regions in Bacillus subtilis entails major refinement of cognate large-scale metabolic model
-
93 Tanaka, K., Henry, C.S., Zinner, J.F., Jolivet, E., Cohoon, M.P., Xia, F., Bidnenko, V., Ehrlich, S.D., Stevens, R.L., Noirot, P., Building the repertoire of dispensable chromosome regions in Bacillus subtilis entails major refinement of cognate large-scale metabolic model. Nucl Acids Res 41 (2013), 687–699.
-
(2013)
Nucl Acids Res
, vol.41
, pp. 687-699
-
-
Tanaka, K.1
Henry, C.S.2
Zinner, J.F.3
Jolivet, E.4
Cohoon, M.P.5
Xia, F.6
Bidnenko, V.7
Ehrlich, S.D.8
Stevens, R.L.9
Noirot, P.10
-
94
-
-
84969916078
-
A Comprehensive, CRISPR-based functional analysis of essential genes in bacteria
-
94• Peters, J.M., Colavin, A., Shi, H., Czarny, T.L., Larson, M.H., Wong, S., Hawkins, J.S., Lu, C.H., Koo, B.M., Marta, E., et al. A Comprehensive, CRISPR-based functional analysis of essential genes in bacteria. Cell 165 (2016), 1493–1506.
-
(2016)
Cell
, vol.165
, pp. 1493-1506
-
-
Peters, J.M.1
Colavin, A.2
Shi, H.3
Czarny, T.L.4
Larson, M.H.5
Wong, S.6
Hawkins, J.S.7
Lu, C.H.8
Koo, B.M.9
Marta, E.10
-
95
-
-
73849146159
-
Enhanced recombinant protein productivity by genome reduction in Bacillus subtilis
-
95 Morimoto, T., Kadoya, R., Endo, K., Tohata, M., Sawada, K., Liu, S., Ozawa, T., Kodama, T., Kakeshita, H., Kageyama, Y., et al. Enhanced recombinant protein productivity by genome reduction in Bacillus subtilis. DNA Res 15 (2008), 73–81.
-
(2008)
DNA Res
, vol.15
, pp. 73-81
-
-
Morimoto, T.1
Kadoya, R.2
Endo, K.3
Tohata, M.4
Sawada, K.5
Liu, S.6
Ozawa, T.7
Kodama, T.8
Kakeshita, H.9
Kageyama, Y.10
-
96
-
-
83255186862
-
Combined effect of improved cell yield and increased specific productivity enhances recombinant enzyme production in genome-reduced Bacillus subtilis strain MGB874
-
96 Manabe, K., Kageyama, Y., Morimoto, T., Ozawa, T., Sawada, K., Endo, K., Tohata, M., Ara, K., Ozaki, K., Ogasawara, N., Combined effect of improved cell yield and increased specific productivity enhances recombinant enzyme production in genome-reduced Bacillus subtilis strain MGB874. Appl Env Microbiol 77 (2011), 8370–8381.
-
(2011)
Appl Env Microbiol
, vol.77
, pp. 8370-8381
-
-
Manabe, K.1
Kageyama, Y.2
Morimoto, T.3
Ozawa, T.4
Sawada, K.5
Endo, K.6
Tohata, M.7
Ara, K.8
Ozaki, K.9
Ogasawara, N.10
-
97
-
-
84897433019
-
13C-metabolic flux analysis in heterologous cellulase production by Bacillus subtilis genome-reduced strain
-
13C-metabolic flux analysis in heterologous cellulase production by Bacillus subtilis genome-reduced strain. J Biotechnol 179 (2014), 42–49.
-
(2014)
J Biotechnol
, vol.179
, pp. 42-49
-
-
Toya, Y.1
Hirasawa, T.2
Morimoto, T.3
Masuda, K.4
Kageyama, Y.5
Ozaki, K.6
Ogasawara, N.7
Shimizu, H.8
-
98
-
-
84987875388
-
Editing of the Bacillus subtilis genome by the CRISPR-Cas9 system
-
98 Altenbuchner, J., Editing of the Bacillus subtilis genome by the CRISPR-Cas9 system. Appl Environ Microbiol 82 (2016), 5421–5427.
-
(2016)
Appl Environ Microbiol
, vol.82
, pp. 5421-5427
-
-
Altenbuchner, J.1
-
99
-
-
84982107482
-
Development of a CRISPR-Cas9 toolkit for comprehensive engineering of Bacillus subtilis
-
99 Westbrook, A.W., Moo-Young, M., Chou, C.P., Development of a CRISPR-Cas9 toolkit for comprehensive engineering of Bacillus subtilis. Appl Environ Microbiol 82 (2016), 4876–4895.
-
(2016)
Appl Environ Microbiol
, vol.82
, pp. 4876-4895
-
-
Westbrook, A.W.1
Moo-Young, M.2
Chou, C.P.3
-
100
-
-
85007425731
-
Complete genome sequence of Bacillus subtilis subsp. subtilis strain 3NA
-
e00084-15
-
100 Reuss, D.R., Schuldes, J., Daniel, R., Altenbuchner, J., Complete genome sequence of Bacillus subtilis subsp. subtilis strain 3NA. Genome Announc, 3, 2015 e00084-15.
-
(2015)
Genome Announc
, vol.3
-
-
Reuss, D.R.1
Schuldes, J.2
Daniel, R.3
Altenbuchner, J.4
-
101
-
-
84973100850
-
Characterization of genome-reduced Bacillus subtilis strains and their application for the production of guanosine and thymidine
-
101 Li, Y., Zhu, X., Zhang, X., Fu, J., Wang, Z., Chen, T., Zhao, X., Characterization of genome-reduced Bacillus subtilis strains and their application for the production of guanosine and thymidine. Microb Cell Fact, 15, 2016, 94.
-
(2016)
Microb Cell Fact
, vol.15
, pp. 94
-
-
Li, Y.1
Zhu, X.2
Zhang, X.3
Fu, J.4
Wang, Z.5
Chen, T.6
Zhao, X.7
-
102
-
-
85007425731
-
Complete genome sequence of Bacillus subtilis subsp. subtilis strain Δ6
-
102 Reuss, D.R., Thürmer, A., Daniel, R., Quax, W.J., Stülke, J., Complete genome sequence of Bacillus subtilis subsp. subtilis strain Δ6. Genome Announc 4 (2016), e00759–e816.
-
(2016)
Genome Announc
, vol.4
, pp. e00759-e816
-
-
Reuss, D.R.1
Thürmer, A.2
Daniel, R.3
Quax, W.J.4
Stülke, J.5
-
103
-
-
84975061735
-
Multigene disruption in undomesticated Bacillus subtilis ATCC 6051a using the CRISPR/Cas9 system
-
103 Zhang, K., Duan, X., Wu, J., Multigene disruption in undomesticated Bacillus subtilis ATCC 6051a using the CRISPR/Cas9 system. Sci Rep, 6, 2016, 27943.
-
(2016)
Sci Rep
, vol.6
, pp. 27943
-
-
Zhang, K.1
Duan, X.2
Wu, J.3
-
104
-
-
84864801619
-
Bio-based production of chemicals, materials and fuels – Corynebacterium glutamicum as versatile cell factory
-
104 Becker, J., Wittmann, C., Bio-based production of chemicals, materials and fuels – Corynebacterium glutamicum as versatile cell factory. Curr Opin Microbiol 23 (2012), 631–640.
-
(2012)
Curr Opin Microbiol
, vol.23
, pp. 631-640
-
-
Becker, J.1
Wittmann, C.2
-
105
-
-
84902096405
-
Microbial production of amino acids and derived chemicals: synthetic biology approaches to strain development
-
105 Wendisch, V.F., Microbial production of amino acids and derived chemicals: synthetic biology approaches to strain development. Curr Opin Biotech 30 (2014), 51–58.
-
(2014)
Curr Opin Biotech
, vol.30
, pp. 51-58
-
-
Wendisch, V.F.1
-
106
-
-
84938950996
-
Engineering microbial cell factories: metabolic engineering of Corynebacterium glutamicum with a focus on non-natural products
-
106 Heider, S.A., Wendisch, V.F., Engineering microbial cell factories: metabolic engineering of Corynebacterium glutamicum with a focus on non-natural products. Biotechnol J 10 (2015), 1170–1184.
-
(2015)
Biotechnol J
, vol.10
, pp. 1170-1184
-
-
Heider, S.A.1
Wendisch, V.F.2
-
107
-
-
29144440227
-
Multiple large segment deletion method for Corynebacterium glutamicum
-
107 Suzuki, N., Nonaka, H., Tsuge, Y., Okayama, S., Inui, M., Yukawa, H., Multiple large segment deletion method for Corynebacterium glutamicum. Appl Microbiol Biotech 69 (2005), 151–161.
-
(2005)
Appl Microbiol Biotech
, vol.69
, pp. 151-161
-
-
Suzuki, N.1
Nonaka, H.2
Tsuge, Y.3
Okayama, S.4
Inui, M.5
Yukawa, H.6
-
108
-
-
84884188636
-
Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 for use as a platform strain for basic research and industrial biotechnology
-
108 Baumgart, M., Unthan, S., Rückert, C., Sivalingam, J., Grünberger, A., Kalinowski, J., Bott, M., Noack, S., Frunzke, J., Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 for use as a platform strain for basic research and industrial biotechnology. Appl Environ Microbiol 79 (2013), 6006–6015.
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 6006-6015
-
-
Baumgart, M.1
Unthan, S.2
Rückert, C.3
Sivalingam, J.4
Grünberger, A.5
Kalinowski, J.6
Bott, M.7
Noack, S.8
Frunzke, J.9
-
109
-
-
84922663277
-
Chassis organism from Corynebacterium glutamicum –a top-down approach to identify and delete irrelevant gene clusters
-
109• Unthan, S., Baumgart, M., Radek, A., Herbst, M., Siebert, D., Bruhl, N., Bartsch, A., Bott, M., Wiechert, W., Marin, K., et al. Chassis organism from Corynebacterium glutamicum –a top-down approach to identify and delete irrelevant gene clusters. Biotechnol J 10 (2015), 290–301.
-
(2015)
Biotechnol J
, vol.10
, pp. 290-301
-
-
Unthan, S.1
Baumgart, M.2
Radek, A.3
Herbst, M.4
Siebert, D.5
Bruhl, N.6
Bartsch, A.7
Bott, M.8
Wiechert, W.9
Marin, K.10
-
110
-
-
84922645148
-
Chassis organism from Corynebacterium glutamicum: the way towards biotechnological domestication of Corynebacteria
-
110 de Lorenzo, V., Chassis organism from Corynebacterium glutamicum: the way towards biotechnological domestication of Corynebacteria. Biotechnol J 10 (2015), 244–245.
-
(2015)
Biotechnol J
, vol.10
, pp. 244-245
-
-
de Lorenzo, V.1
-
111
-
-
81255146230
-
The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation
-
111 Umbarger Mark, A., Toro, E., Wright Matthew, A., Porreca Gregory, J., Baù, D., Hong, S.-H., Fero Michael, J., Zhu Lihua, J., Marti-Renom Marc, A., McAdams Harley, H., et al. The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation. Mol Cell 44 (2011), 252–264.
-
(2011)
Mol Cell
, vol.44
, pp. 252-264
-
-
Umbarger Mark, A.1
Toro, E.2
Wright Matthew, A.3
Porreca Gregory, J.4
Baù, D.5
Hong, S.-H.6
Fero Michael, J.7
Zhu Lihua, J.8
Marti-Renom Marc, A.9
McAdams Harley, H.10
-
112
-
-
24944583078
-
Genetically modified organisms for the environment: stories of success and failure and what we have learnt from them
-
112 Cases, I., de Lorenzo, V., Genetically modified organisms for the environment: stories of success and failure and what we have learnt from them. Int Microbiol 8 (2005), 213–222.
-
(2005)
Int Microbiol
, vol.8
, pp. 213-222
-
-
Cases, I.1
de Lorenzo, V.2
-
113
-
-
84910046527
-
A brief guide to Pseudomonas putida as a microbial cell factory
-
113 Nikel, P.I., A brief guide to Pseudomonas putida as a microbial cell factory. BioEssays–Brief Guides, 2012 http://goo.gl/DXF1y.
-
(2012)
BioEssays–Brief Guides
-
-
Nikel, P.I.1
-
114
-
-
84862292281
-
Industrial biotechnology of Pseudomonas putida and related species
-
114 Poblete-Castro, I., Becker, J., Dohnt, K., dos Santos, V.M., Wittmann, C., Industrial biotechnology of Pseudomonas putida and related species. Appl Microbiol Biotechnol 93 (2012), 2279–2290.
-
(2012)
Appl Microbiol Biotechnol
, vol.93
, pp. 2279-2290
-
-
Poblete-Castro, I.1
Becker, J.2
Dohnt, K.3
dos Santos, V.M.4
Wittmann, C.5
-
115
-
-
84937630490
-
Pseudomonas putida — a versatile host for the production of natural products
-
115 Loeschcke, A., Thies, S., Pseudomonas putida — a versatile host for the production of natural products. Appl Microbiol Biotechnol 99 (2015), 6197–6214.
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 6197-6214
-
-
Loeschcke, A.1
Thies, S.2
-
116
-
-
84969963522
-
From dirt to industrial applications: Pseudomonas putida as a Synthetic Biology chassis for hosting harsh biochemical reactions
-
116 Nikel, P.I., Chavarria, M., Danchin, A., de Lorenzo, V., From dirt to industrial applications: Pseudomonas putida as a Synthetic Biology chassis for hosting harsh biochemical reactions. Curr Opin Chem Biol 34 (2016), 20–29.
-
(2016)
Curr Opin Chem Biol
, vol.34
, pp. 20-29
-
-
Nikel, P.I.1
Chavarria, M.2
Danchin, A.3
de Lorenzo, V.4
-
117
-
-
84942606326
-
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida
-
117 Ramos, J.L., Sol Cuenca, M., Molina-Santiago, C., Segura, A., Duque, E., Gomez-Garcia, M.R., Udaondo, Z., Roca, A., Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida. FEMS Microbiol Rev 39 (2015), 555–566.
-
(2015)
FEMS Microbiol Rev
, vol.39
, pp. 555-566
-
-
Ramos, J.L.1
Sol Cuenca, M.2
Molina-Santiago, C.3
Segura, A.4
Duque, E.5
Gomez-Garcia, M.R.6
Udaondo, Z.7
Roca, A.8
-
118
-
-
84944910018
-
Pseudomonas putida KT2440 strain metabolizes glucose through a cycle formed by enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and Pentose Phosphate Pathways
-
Biochemical and physiological explanation of why P. putida is an optimal host for running harsh redox reactions.
-
118•• Nikel, P.I., Chavarria, M., Fuhrer, T., Sauer, U., de Lorenzo, V., Pseudomonas putida KT2440 strain metabolizes glucose through a cycle formed by enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and Pentose Phosphate Pathways. J Biol Chem 290 (2015), 25920–25932 Biochemical and physiological explanation of why P. putida is an optimal host for running harsh redox reactions.
-
(2015)
J Biol Chem
, vol.290
, pp. 25920-25932
-
-
Nikel, P.I.1
Chavarria, M.2
Fuhrer, T.3
Sauer, U.4
de Lorenzo, V.5
-
119
-
-
84964771581
-
The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis
-
119• Belda, E., van Heck, R.G., Lopez-Sanchez, M.J., Cruveiller, S., Barbe, V., Fraser, C., Klenk, H.P., Petersen, J., Morgat, A., Nikel, P.I., et al. The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis. Environ Microbiol, 2016, 10.1111/1462-2920.13230.
-
(2016)
Environ Microbiol
-
-
Belda, E.1
van Heck, R.G.2
Lopez-Sanchez, M.J.3
Cruveiller, S.4
Barbe, V.5
Fraser, C.6
Klenk, H.P.7
Petersen, J.8
Morgat, A.9
Nikel, P.I.10
-
120
-
-
80053648189
-
Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multi-resistant antibiotic profile of Pseudomonas putida KT2440
-
120 Martinez-Garcia, E., de Lorenzo, V., Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multi-resistant antibiotic profile of Pseudomonas putida KT2440. Environ Microbiol 13 (2011), 2702–2716.
-
(2011)
Environ Microbiol
, vol.13
, pp. 2702-2716
-
-
Martinez-Garcia, E.1
de Lorenzo, V.2
-
121
-
-
84928718106
-
Genome reduction boosts heterologous gene expression in Pseudomonas putida
-
121• Lieder, S., Nikel, P.I., de Lorenzo, V., Takors, R., Genome reduction boosts heterologous gene expression in Pseudomonas putida. Microb Cell Fact, 14, 2015, 23.
-
(2015)
Microb Cell Fact
, vol.14
, pp. 23
-
-
Lieder, S.1
Nikel, P.I.2
de Lorenzo, V.3
Takors, R.4
-
122
-
-
84964313870
-
Pseudomonas 2.0: genetic upgrading of P. putida KT2440 as an enhanced host for heterologous gene expression
-
122 Martinez-Garcia, E., Nikel, P.I., Aparicio, T., de Lorenzo, V., Pseudomonas 2.0: genetic upgrading of P. putida KT2440 as an enhanced host for heterologous gene expression. Microb Cell Fact, 13, 2014, 159.
-
(2014)
Microb Cell Fact
, vol.13
, pp. 159
-
-
Martinez-Garcia, E.1
Nikel, P.I.2
Aparicio, T.3
de Lorenzo, V.4
-
123
-
-
84941112071
-
SEVA 2.0: an update of the Standard European Vector Architecture for de-/re-construction of bacterial functionalities
-
123 Martinez-Garcia, E., Aparicio, T., Goni-Moreno, A., Fraile, S., de Lorenzo, V., SEVA 2.0: an update of the Standard European Vector Architecture for de-/re-construction of bacterial functionalities. Nucleic Acids Res 43 (2015), D1183–D1189.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. D1183-D1189
-
-
Martinez-Garcia, E.1
Aparicio, T.2
Goni-Moreno, A.3
Fraile, S.4
de Lorenzo, V.5
-
124
-
-
84861943059
-
Random and cyclical deletion of large DNA segments in the genome of Pseudomonas putida
-
124 Leprince, A., de Lorenzo, V., Voller, P., van Passel, M.W., Martins dos Santos, V.A., Random and cyclical deletion of large DNA segments in the genome of Pseudomonas putida. Environ Microbiol 14 (2012), 1444–1453.
-
(2012)
Environ Microbiol
, vol.14
, pp. 1444-1453
-
-
Leprince, A.1
de Lorenzo, V.2
Voller, P.3
van Passel, M.W.4
Martins dos Santos, V.A.5
-
125
-
-
82355181978
-
Streamlining of a Pseudomonas putida genome using a combinatorial deletion method based on minitransposon insertion and the Flp-FRT recombination system
-
125 Leprince, A., Janus, D., de Lorenzo, V., Santos, V.M., Streamlining of a Pseudomonas putida genome using a combinatorial deletion method based on minitransposon insertion and the Flp-FRT recombination system. Meth Mol Biol 813 (2012), 249–266.
-
(2012)
Meth Mol Biol
, vol.813
, pp. 249-266
-
-
Leprince, A.1
Janus, D.2
de Lorenzo, V.3
Santos, V.M.4
-
126
-
-
84989860210
-
The Ssr protein (T1E_1405) from Pseudomonas putida DOT-T1E enables oligonucleotide-based recombineering in platform strain P. putida EM42
-
126• Aparicio, T., Jensen, S.I., Nielsen, A.T., de Lorenzo, V., Martinez-Garcia, E., The Ssr protein (T1E_1405) from Pseudomonas putida DOT-T1E enables oligonucleotide-based recombineering in platform strain P. putida EM42. Biotechnol J, 2016, 10.1002/biot.201600317.
-
(2016)
Biotechnol J
-
-
Aparicio, T.1
Jensen, S.I.2
Nielsen, A.T.3
de Lorenzo, V.4
Martinez-Garcia, E.5
-
127
-
-
84905504592
-
Recently published Streptomyces genome sequences
-
127 Harrison, J., Studholme, D.J., Recently published Streptomyces genome sequences. Microb Biotechnol 7 (2014), 373–380.
-
(2014)
Microb Biotechnol
, vol.7
, pp. 373-380
-
-
Harrison, J.1
Studholme, D.J.2
-
128
-
-
77249153701
-
Genome-minimized Streptomyces host for the heterologous expression of secondary metabolism
-
128 Komatsu, M., Uchiyama, T., Ōmura, S., Cane, D.E., Ikeda, H., Genome-minimized Streptomyces host for the heterologous expression of secondary metabolism. Proc Natl Acad Sci USA 107 (2010), 2646–2651.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 2646-2651
-
-
Komatsu, M.1
Uchiyama, T.2
Ōmura, S.3
Cane, D.E.4
Ikeda, H.5
-
129
-
-
84895074462
-
Genome mining of the Streptomyces avermitilis genome and development of genome-minimized hosts for heterologous expression of biosynthetic gene clusters
-
129 Ikeda, H., Kazuo, S.Y., Omura, S., Genome mining of the Streptomyces avermitilis genome and development of genome-minimized hosts for heterologous expression of biosynthetic gene clusters. J Ind Microbiol Biotechnol 41 (2014), 233–250.
-
(2014)
J Ind Microbiol Biotechnol
, vol.41
, pp. 233-250
-
-
Ikeda, H.1
Kazuo, S.Y.2
Omura, S.3
-
130
-
-
84874737062
-
Engineering Synechococcus elongatus PCC7942 to grow continuously in diurnal conditions
-
130 McEwen, J.T., Machado, I.M., Connor, M.R., Atsumi, S., Engineering Synechococcus elongatus PCC7942 to grow continuously in diurnal conditions. Appl Environ Microbiol 79 (2012), 1668–1675.
-
(2012)
Appl Environ Microbiol
, vol.79
, pp. 1668-1675
-
-
McEwen, J.T.1
Machado, I.M.2
Connor, M.R.3
Atsumi, S.4
-
131
-
-
84940197691
-
Synechococcus elongatus UTEX 2973, a fast growing cyanobacterial chassis for biosynthesis using light and CO2
-
131 Yu, J., Liberton, M., Cliften, P.F., Head, R.D., Jacobs, J.M., Smith, R.D., Koppenaal, D.W., Brand, J.J., Pakrasi, H.B., Synechococcus elongatus UTEX 2973, a fast growing cyanobacterial chassis for biosynthesis using light and CO2. Sci Rep, 5, 2015, 8132.
-
(2015)
Sci Rep
, vol.5
, pp. 8132
-
-
Yu, J.1
Liberton, M.2
Cliften, P.F.3
Head, R.D.4
Jacobs, J.M.5
Smith, R.D.6
Koppenaal, D.W.7
Brand, J.J.8
Pakrasi, H.B.9
-
132
-
-
84883800240
-
Development of Synechocystis sp. PCC 6803 as a phototrophic cell factory
-
132 Yu, Y., You, L., Liu, D., Hollinshead, W., Tang, Y.J., Zhang, F., Development of Synechocystis sp. PCC 6803 as a phototrophic cell factory. Marine Drugs 11 (2013), 2894–2916.
-
(2013)
Marine Drugs
, vol.11
, pp. 2894-2916
-
-
Yu, Y.1
You, L.2
Liu, D.3
Hollinshead, W.4
Tang, Y.J.5
Zhang, F.6
-
133
-
-
84856690893
-
Construction of a chassis for hydrogen production: physiological and molecular characterization of a Synechocystis sp. PCC 6803 mutant lacking a functional bidirectional hydrogenase
-
133 Pinto, F., van Elburg, K.A., Pacheco, C.C., Lopo, M., Noirel, J., Montagud, A., Urchueguía, J.F., Wright, P.C., Tamagnini, P., Construction of a chassis for hydrogen production: physiological and molecular characterization of a Synechocystis sp. PCC 6803 mutant lacking a functional bidirectional hydrogenase. Microbiology 158 (2012), 448–464.
-
(2012)
Microbiology
, vol.158
, pp. 448-464
-
-
Pinto, F.1
van Elburg, K.A.2
Pacheco, C.C.3
Lopo, M.4
Noirel, J.5
Montagud, A.6
Urchueguía, J.F.7
Wright, P.C.8
Tamagnini, P.9
-
134
-
-
84884273482
-
Design and development of synthetic microbial platform cells for bioenergy
-
134 Lee, S.J., Lee, S.J., Lee, D.W., Design and development of synthetic microbial platform cells for bioenergy. Front Microbiol, 4, 2014, 92.
-
(2014)
Front Microbiol
, vol.4
, pp. 92
-
-
Lee, S.J.1
Lee, S.J.2
Lee, D.W.3
-
135
-
-
79957498811
-
Synthetic biology in cyanobacteria engineering and analyzing novel functions
-
135 Heidorn, T., Camsund, D., Huang, H.-H., Lindberg, P., Oliveira, P., Stensjö, K., Lindblad, P., Synthetic biology in cyanobacteria engineering and analyzing novel functions. Meth Enzymol 497 (2010), 539–579.
-
(2010)
Meth Enzymol
, vol.497
, pp. 539-579
-
-
Heidorn, T.1
Camsund, D.2
Huang, H.-H.3
Lindberg, P.4
Oliveira, P.5
Stensjö, K.6
Lindblad, P.7
-
136
-
-
84874738185
-
A genetic system for Clostridium ljungdahlii: a chassis for autotrophic production of biocommodities and a model homoacetogen
-
136 Leang, C., Ueki, T., Nevin, K.P., Lovley, D.R., A genetic system for Clostridium ljungdahlii: a chassis for autotrophic production of biocommodities and a model homoacetogen. Appl Env Microbiol 79 (2013), 1102–1109.
-
(2013)
Appl Env Microbiol
, vol.79
, pp. 1102-1109
-
-
Leang, C.1
Ueki, T.2
Nevin, K.P.3
Lovley, D.R.4
-
137
-
-
84938323503
-
Programming a human commensal bacterium, to sense and respond to stimuli in the murine gut microbiota
-
137 Mimee, M., Tucker, A.C., Voigt, C.A., Lu, T.K., Programming a human commensal bacterium, to sense and respond to stimuli in the murine gut microbiota. Cell Syst 1 (2015), 62–71.
-
(2015)
Cell Syst
, vol.1
, pp. 62-71
-
-
Mimee, M.1
Tucker, A.C.2
Voigt, C.A.3
Lu, T.K.4
-
138
-
-
85029535377
-
Vibrio natriegens, a new genomic powerhouse. bioRxiv
-
138 Lee, H.H., Ostrov, N., Wong, B.G., Gold, M.A., Khalil, A., Church, G.M., Vibrio natriegens, a new genomic powerhouse. bioRxiv. 2016, 10.1101/058487.
-
(2016)
-
-
Lee, H.H.1
Ostrov, N.2
Wong, B.G.3
Gold, M.A.4
Khalil, A.5
Church, G.M.6
-
139
-
-
84984666893
-
Vibrio natriegens as a fast-growing host for molecular biology
-
139 Weinstock, M.T., Hesek, E.D., Wilson, C.M., Gibson, D.G., Vibrio natriegens as a fast-growing host for molecular biology. Nat Methods, 2016, 10.1038/nmeth.3970.
-
(2016)
Nat Methods
-
-
Weinstock, M.T.1
Hesek, E.D.2
Wilson, C.M.3
Gibson, D.G.4
-
140
-
-
77749304469
-
Biotechnology as the engine for the knowledge-based bio-economy
-
140 Aguilar, A., Bochereau, L., Matthiessen, L., Biotechnology as the engine for the knowledge-based bio-economy. Biotech Gen Eng Revs 26 (2009), 371–388.
-
(2009)
Biotech Gen Eng Revs
, vol.26
, pp. 371-388
-
-
Aguilar, A.1
Bochereau, L.2
Matthiessen, L.3
-
141
-
-
84871899880
-
Obama administration report underlines support for biotech
-
576-576
-
141 Waltz, E., Obama administration report underlines support for biotech. Nature Biotech, 30, 2012 576-576.
-
(2012)
Nature Biotech
, vol.30
-
-
Waltz, E.1
|