-
1
-
-
76449099085
-
Expression of phosphofructokinase in Neisseria meningitidis
-
Baart, G.J.E., Langenhof, M., van de Waterbeemd, B., Hamstra, H.J., Zomer, B., van der Pol, L.A., etal. (2010) Expression of phosphofructokinase in Neisseria meningitidis. Microbiology 156: 530-542.
-
(2010)
Microbiology
, vol.156
, pp. 530-542
-
-
Baart, G.J.E.1
van de Langenhof, M.2
Waterbeemd, B.3
Hamstra, H.J.4
van der Zomer, B.5
Pol, L.A.6
-
2
-
-
0019805971
-
Specific purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas
-
Bagdasarian, M., Lurz, R., Rückert, B., Franklin, F.C.H., Bagdasarian, M.M., Frey, J., and Timmis, K.N. (1981) Specific purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene 16: 237-247.
-
(1981)
Gene
, vol.16
, pp. 237-247
-
-
Bagdasarian, M.1
Lurz, R.2
Rückert, B.3
Franklin, F.C.H.4
Bagdasarian, M.M.5
Frey, J.6
Timmis, K.N.7
-
3
-
-
0015260263
-
Quantitative extraction and estimation of intracellular nucleoside triphosphates of Escherichia coli
-
Bagnara, A.S., and Finch, L.R. (1972) Quantitative extraction and estimation of intracellular nucleoside triphosphates of Escherichia coli. Anal Biochem 45: 24-34.
-
(1972)
Anal Biochem
, vol.45
, pp. 24-34
-
-
Bagnara, A.S.1
Finch, L.R.2
-
4
-
-
84861422324
-
Rethinking glycolysis: on the biochemical logic of metabolic pathways
-
Bar-Even, A., Flamholz, A., Noor, E., and Milo, R. (2012) Rethinking glycolysis: on the biochemical logic of metabolic pathways. Nat Chem Biol 8: 509-517.
-
(2012)
Nat Chem Biol
, vol.8
, pp. 509-517
-
-
Bar-Even, A.1
Flamholz, A.2
Noor, E.3
Milo, R.4
-
5
-
-
64049094359
-
Escherichia coli O157:H7 glutamate- and arginine-dependent acid-resistance systems protect against oxidative stress during extreme acid challenge
-
Bearson, B.L., Lee, I.S., and Casey, T.A. (2009) Escherichia coli O157:H7 glutamate- and arginine-dependent acid-resistance systems protect against oxidative stress during extreme acid challenge. Microbiology 155: 805-812.
-
(2009)
Microbiology
, vol.155
, pp. 805-812
-
-
Bearson, B.L.1
Lee, I.S.2
Casey, T.A.3
-
6
-
-
0029787379
-
The mechanism of the auxotrophy for sulfur-containing amino acids imposed upon Escherichia coli by superoxide
-
Benov, L., Kredich, N.M., and Fridovich, I. (1996) The mechanism of the auxotrophy for sulfur-containing amino acids imposed upon Escherichia coli by superoxide. J Biol Chem 271: 21037-21040.
-
(1996)
J Biol Chem
, vol.271
, pp. 21037-21040
-
-
Benov, L.1
Kredich, N.M.2
Fridovich, I.3
-
7
-
-
0015888084
-
An improved cycling assay for nicotinamide adenine dinucleotide
-
Bernofsky, C., and Swan, M. (1973) An improved cycling assay for nicotinamide adenine dinucleotide. Anal Biochem 53: 452-458.
-
(1973)
Anal Biochem
, vol.53
, pp. 452-458
-
-
Bernofsky, C.1
Swan, M.2
-
8
-
-
52449130902
-
Metabolic response of Pseudomonas putida during redox biocatalysis in the presence of a second octanol phase
-
Blank, L.M., Ionidis, G., Ebert, B.E., Bühler, B., and Schmid, A. (2008) Metabolic response of Pseudomonas putida during redox biocatalysis in the presence of a second octanol phase. FEBS J 275: 5173-5190.
-
(2008)
FEBS J
, vol.275
, pp. 5173-5190
-
-
Blank, L.M.1
Ionidis, G.2
Ebert, B.E.3
Bühler, B.4
Schmid, A.5
-
9
-
-
77954141406
-
Redox biocatalysis and metabolism: molecular mechanisms and metabolic network analysis
-
Blank, L.M., Ebert, B.E., Buehler, K., and Bühler, B. (2010) Redox biocatalysis and metabolism: molecular mechanisms and metabolic network analysis. Antioxid Redox Signal 13: 349-394.
-
(2010)
Antioxid Redox Signal
, vol.13
, pp. 349-394
-
-
Blank, L.M.1
Ebert, B.E.2
Buehler, K.3
Bühler, B.4
-
10
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M.M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
11
-
-
0036795791
-
Engineering of primary carbon metabolism for improved antibiotic production in Streptomyces lividans
-
Butler, M.J., Bruheim, P., Jovetic, S., Marinelli, F., Postma, P.W., and Bibb, M.J. (2002) Engineering of primary carbon metabolism for improved antibiotic production in Streptomyces lividans. Appl Environ Microbiol 68: 4731-4739.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 4731-4739
-
-
Butler, M.J.1
Bruheim, P.2
Jovetic, S.3
Marinelli, F.4
Postma, P.W.5
Bibb, M.J.6
-
12
-
-
0033767925
-
Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and Saccharomyces cerevisiae responses to oxidative stress
-
Carmel-Harel, O., and Storz, G. (2000) Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and Saccharomyces cerevisiae responses to oxidative stress. Annu Rev Microbiol 54: 439-461.
-
(2000)
Annu Rev Microbiol
, vol.54
, pp. 439-461
-
-
Carmel-Harel, O.1
Storz, G.2
-
13
-
-
34447522100
-
Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: genomic and flux analysis
-
del Castillo, T., Ramos, J.L., Rodríguez-Herva, J.J., Fuhrer, T., Sauer, U., and Duque, E. (2007) Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: genomic and flux analysis. J Bacteriol 189: 5142-5152.
-
(2007)
J Bacteriol
, vol.189
, pp. 5142-5152
-
-
del Castillo, T.1
Ramos, J.L.2
Rodríguez-Herva, J.J.3
Fuhrer, T.4
Sauer, U.5
Duque, E.6
-
14
-
-
79953228862
-
Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida
-
Chavarría, M., Santiago, C., Platero, R., Krell, T., Casasnovas, J.M., and de Lorenzo, V. (2011) Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida. J Biol Chem 286: 9351-9359.
-
(2011)
J Biol Chem
, vol.286
, pp. 9351-9359
-
-
Chavarría, M.1
Santiago, C.2
Platero, R.3
Krell, T.4
de Casasnovas, J.M.5
Lorenzo, V.6
-
15
-
-
84860532358
-
Regulatory tasks of the phosphoenolpyruvate-phosphotransferase system of Pseudomonas putida in central carbon metabolism
-
Chavarría, M., Kleijn, R.J., Sauer, U., Pflüger-Grau, K., and de Lorenzo, V. (2012a) Regulatory tasks of the phosphoenolpyruvate-phosphotransferase system of Pseudomonas putida in central carbon metabolism. mBio 3: e00028-e00012.
-
(2012)
mBio
, vol.3
-
-
Chavarría, M.1
Kleijn, R.J.2
Sauer, U.3
de Pflüger-Grau, K.4
Lorenzo, V.5
-
16
-
-
84871936294
-
Cra regulates the cross-talk between the two branches of the phosphoenolpyruvate:phosphotransferase system of Pseudomonas putida
-
DOI: 10.1111/j.1462-2920.2012.02808.x.
-
Chavarría, M., Fuhrer, T., Sauer, U., Pflüger-Grau, K., and de Lorenzo, V. (2012b) Cra regulates the cross-talk between the two branches of the phosphoenolpyruvate:phosphotransferase system of Pseudomonas putida. Environ Microbiol (In Press). DOI: 10.1111/j.1462-2920.2012.02808.x.
-
(2012)
Environ Microbiol
-
-
Chavarría, M.1
Fuhrer, T.2
Sauer, U.3
de Pflüger-Grau, K.4
Lorenzo, V.5
-
17
-
-
32244448730
-
A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation
-
Choi, K.H., Kumar, A., and Schweizer, H.P. (2006) A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. J Microbiol Methods 64: 391-397.
-
(2006)
J Microbiol Methods
, vol.64
, pp. 391-397
-
-
Choi, K.H.1
Kumar, A.2
Schweizer, H.P.3
-
18
-
-
0026913168
-
The Entner-Doudoroff pathway: history, physiology and molecular biology
-
Conway, T. (1992) The Entner-Doudoroff pathway: history, physiology and molecular biology. FEMS Microbiol Rev 9: 1-27.
-
(1992)
FEMS Microbiol Rev
, vol.9
, pp. 1-27
-
-
Conway, T.1
-
19
-
-
2542469551
-
Protein disulfide bond formation in the cytoplasm during oxidative stress
-
Cumming, R.C., Andon, N.L., Haynes, P.A., Park, M., Fischer, W.H., and Schubert, D. (2004) Protein disulfide bond formation in the cytoplasm during oxidative stress. J Biol Chem 279: 21749-21758.
-
(2004)
J Biol Chem
, vol.279
, pp. 21749-21758
-
-
Cumming, R.C.1
Andon, N.L.2
Haynes, P.A.3
Park, M.4
Fischer, W.H.5
Schubert, D.6
-
20
-
-
0035211224
-
Comparison of maximum specific growth rates and lag times estimated from absorbance and viable count data by different mathematical models
-
Dalgaard, P., and Koutsoumanis, K. (2001) Comparison of maximum specific growth rates and lag times estimated from absorbance and viable count data by different mathematical models. J Microbiol Methods 43: 183-196.
-
(2001)
J Microbiol Methods
, vol.43
, pp. 183-196
-
-
Dalgaard, P.1
Koutsoumanis, K.2
-
21
-
-
0042254990
-
Comparative carbohydrate metabolism and localization of enzymes in Pseudomonas and related micro-organisms
-
De Ley, J. (1960) Comparative carbohydrate metabolism and localization of enzymes in Pseudomonas and related micro-organisms. J Appl Bacteriol 23: 400-441.
-
(1960)
J Appl Bacteriol
, vol.23
, pp. 400-441
-
-
De Ley, J.1
-
22
-
-
0026335852
-
Regulation of bacterial oxidative stress genes
-
Demple, B. (1991) Regulation of bacterial oxidative stress genes. Annu Rev Genet 25: 315-337.
-
(1991)
Annu Rev Genet
, vol.25
, pp. 315-337
-
-
Demple, B.1
-
23
-
-
57049138931
-
Towards a genome-wide mutant library of Pseudomonas putida strain KT2440
-
Ramos, J.L., and Filloux, A. (eds). Berlin, Germany: Springer -.
-
Duque, E., Molina-Henares, A.J., Torre, J., Molina-Henares, M.A., del Castillo, T., Lam, J., and Ramos, J.L. (2007) Towards a genome-wide mutant library of Pseudomonas putida strain KT2440. In Pseudomonas: A Model System in Biology. Ramos, J.L., and Filloux, A. (eds). Berlin, Germany: Springer, pp. 227-251.
-
(2007)
Pseudomonas: A Model System in Biology
, pp. 227-251
-
-
Duque, E.1
Molina-Henares, A.J.2
Torre, J.3
Molina-Henares, M.A.4
del Castillo, T.5
Lam, J.6
Ramos, J.L.7
-
24
-
-
80052787409
-
Response of Pseudomonas putida KT2440 to increased NADH and ATP demand
-
Ebert, B.E., Kurth, F., Grund, M., Blank, L.M., and Schmid, A. (2011) Response of Pseudomonas putida KT2440 to increased NADH and ATP demand. Appl Environ Microbiol 77: 6597-6605.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 6597-6605
-
-
Ebert, B.E.1
Kurth, F.2
Grund, M.3
Blank, L.M.4
Schmid, A.5
-
25
-
-
76949122636
-
Glucose and gluconic acid oxidation of Pseudomonas saccharophila
-
Entner, N., and Doudoroff, M. (1952) Glucose and gluconic acid oxidation of Pseudomonas saccharophila. J Biol Chem 196: 853-862.
-
(1952)
J Biol Chem
, vol.196
, pp. 853-862
-
-
Entner, N.1
Doudoroff, M.2
-
26
-
-
84862171231
-
The metabolic blueprint of Phaeodactylum tricornutum reveals a eukaryotic Entner-Doudoroff glycolytic pathway
-
Fabris, M., Matthijs, M., Rombauts, S., Vyverman, W., Goossens, A., and Baart, G.J.E. (2012) The metabolic blueprint of Phaeodactylum tricornutum reveals a eukaryotic Entner-Doudoroff glycolytic pathway. Plant J 70: 1004-1014.
-
(2012)
Plant J
, vol.70
, pp. 1004-1014
-
-
Fabris, M.1
Matthijs, M.2
Rombauts, S.3
Vyverman, W.4
Goossens, A.5
Baart, G.J.E.6
-
27
-
-
80054757000
-
Microbial degradation of aromatic compounds - from one strategy to four
-
Fuchs, G., Boll, M., and Heider, J. (2011) Microbial degradation of aromatic compounds - from one strategy to four. Nat Rev Microbiol 9: 803-816.
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 803-816
-
-
Fuchs, G.1
Boll, M.2
Heider, J.3
-
28
-
-
64049099490
-
Different biochemical mechanisms ensure network-wide balancing of reducing equivalents in microbial metabolism
-
Fuhrer, T., and Sauer, U. (2009) Different biochemical mechanisms ensure network-wide balancing of reducing equivalents in microbial metabolism. J Bacteriol 191: 2112-2121.
-
(2009)
J Bacteriol
, vol.191
, pp. 2112-2121
-
-
Fuhrer, T.1
Sauer, U.2
-
29
-
-
14244256095
-
Experimental identification and quantification of glucose metabolism in seven bacterial species
-
Fuhrer, T., Fischer, E., and Sauer, U. (2005) Experimental identification and quantification of glucose metabolism in seven bacterial species. J Bacteriol 187: 1581-1590.
-
(2005)
J Bacteriol
, vol.187
, pp. 1581-1590
-
-
Fuhrer, T.1
Fischer, E.2
Sauer, U.3
-
30
-
-
77952569352
-
Glucose metabolism in Legionella pneumophila: dependence on the Entner-Doudoroff pathway and connection with intracellular bacterial growth
-
Harada, E., Iida, K.I., Shiota, S., Nakayama, H., and Yoshida, S.I. (2010) Glucose metabolism in Legionella pneumophila: dependence on the Entner-Doudoroff pathway and connection with intracellular bacterial growth. J Bacteriol 192: 2892-2899.
-
(2010)
J Bacteriol
, vol.192
, pp. 2892-2899
-
-
Harada, E.1
Iida, K.I.2
Shiota, S.3
Nakayama, H.4
Yoshida, S.I.5
-
31
-
-
0016909331
-
The significance of phosphofructokinase to the regulation of carbohydrate metabolism
-
Hofmann, E. (1976) The significance of phosphofructokinase to the regulation of carbohydrate metabolism. Rev Physiol Biochem Pharmacol 75: 1-68.
-
(1976)
Rev Physiol Biochem Pharmacol
, vol.75
, pp. 1-68
-
-
Hofmann, E.1
-
32
-
-
14044271464
-
Oxidative stress inactivates cobalamin-independent methionine synthase (MetE) in Escherichia coli
-
Hondorp, E.R., and Matthews, R.G. (2004) Oxidative stress inactivates cobalamin-independent methionine synthase (MetE) in Escherichia coli. PLoS Biol 2: e336.
-
(2004)
PLoS Biol
, vol.2
-
-
Hondorp, E.R.1
Matthews, R.G.2
-
33
-
-
50649117912
-
Cellular defenses against superoxide and hydrogen peroxide
-
Imlay, J.A. (2008) Cellular defenses against superoxide and hydrogen peroxide. Annu Rev Biochem 77: 755-776.
-
(2008)
Annu Rev Biochem
, vol.77
, pp. 755-776
-
-
Imlay, J.A.1
-
34
-
-
0029844594
-
Importance of catalase in the adaptive response to hydrogen peroxide: analysis of acatalasaemic Saccharomyces cerevisiae
-
Izawa, S., Inoue, Y., and Kimura, A. (1996) Importance of catalase in the adaptive response to hydrogen peroxide: analysis of acatalasaemic Saccharomyces cerevisiae. Biochem J 320: 61-67.
-
(1996)
Biochem J
, vol.320
, pp. 61-67
-
-
Izawa, S.1
Inoue, Y.2
Kimura, A.3
-
35
-
-
84863470139
-
Effect of modified glucose catabolism on xanthan production in Xanthomonas oryzae pv. oryzae
-
Jang, S.G., Lee, B.M., and Cho, J.Y. (2012) Effect of modified glucose catabolism on xanthan production in Xanthomonas oryzae pv. oryzae. J Ind Microbiol Biotechnol 39: 649-654.
-
(2012)
J Ind Microbiol Biotechnol
, vol.39
, pp. 649-654
-
-
Jang, S.G.1
Lee, B.M.2
Cho, J.Y.3
-
36
-
-
35848947748
-
Why metabolic enzymes are essential or nonessential for growth of Escherichia coli K12 on glucose
-
Kim, J., and Copley, S.D. (2007) Why metabolic enzymes are essential or nonessential for growth of Escherichia coli K12 on glucose. Biochemistry 46: 12501-12511.
-
(2007)
Biochemistry
, vol.46
, pp. 12501-12511
-
-
Kim, J.1
Copley, S.D.2
-
37
-
-
58949096129
-
Dual regulation of zwf-1 by both 2-keto-3-deoxy-6-phosphogluconate and oxidative stress in Pseudomonas putida
-
Kim, J., Jeon, C.O., and Park, W. (2008) Dual regulation of zwf-1 by both 2-keto-3-deoxy-6-phosphogluconate and oxidative stress in Pseudomonas putida. Microbiology 154: 3905-3916.
-
(2008)
Microbiology
, vol.154
, pp. 3905-3916
-
-
Kim, J.1
Jeon, C.O.2
Park, W.3
-
38
-
-
0029006990
-
Diamide: an oxidant probe for thiols
-
Kosower, N.S., and Kosower, E.M. (1995) Diamide: an oxidant probe for thiols. Methods Enzymol 251: 123-133.
-
(1995)
Methods Enzymol
, vol.251
, pp. 123-133
-
-
Kosower, N.S.1
Kosower, E.M.2
-
39
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U.K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
40
-
-
0031433014
-
Métabolisme carboné et énergétique des Pseudomonas spp fluorescents saprophytes à oxydase positive
-
Latour, X., and Lemanceau, P. (1997) Métabolisme carboné et énergétique des Pseudomonas spp fluorescents saprophytes à oxydase positive. Agronomie 17: 427-443.
-
(1997)
Agronomie
, vol.17
, pp. 427-443
-
-
Latour, X.1
Lemanceau, P.2
-
42
-
-
84871430133
-
Microbial bioremediation of chemical pollutants: how bacteria cope with multi-stress environmental scenarios
-
Storz, G., and Hengge, R. (eds). Washington, DC, USA: ASM Press -.
-
Loza-Tavera, H., and de Lorenzo, V. (2011) Microbial bioremediation of chemical pollutants: how bacteria cope with multi-stress environmental scenarios. In Bacterial Stress Responses. Storz, G., and Hengge, R. (eds). Washington, DC, USA: ASM Press, pp. 481-492.
-
(2011)
Bacterial Stress Responses
, pp. 481-492
-
-
Loza-Tavera, H.1
de Lorenzo, V.2
-
43
-
-
0016791330
-
Comparison of methods for extraction of bacterial adenine nucleotides determined by firefly assay
-
Lundin, A., and Thore, A. (1975) Comparison of methods for extraction of bacterial adenine nucleotides determined by firefly assay. Appl Microbiol 30: 713-721.
-
(1975)
Appl Microbiol
, vol.30
, pp. 713-721
-
-
Lundin, A.1
Thore, A.2
-
44
-
-
84860376514
-
Metabolic and regulatory rearrangements underlying efficient d-xylose utilization in engineered Pseudomonas putida S12
-
Meijnen, J.P., de Winde, J.H., and Ruijssenaars, H.J. (2012) Metabolic and regulatory rearrangements underlying efficient d-xylose utilization in engineered Pseudomonas putida S12. J Biol Chem 287: 14606-14614.
-
(2012)
J Biol Chem
, vol.287
, pp. 14606-14614
-
-
Meijnen, J.P.1
de Winde, J.H.2
Ruijssenaars, H.J.3
-
45
-
-
0003785155
-
-
Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory.
-
Miller, J.H. (1972) Experiments in Molecular Genetics. Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory.
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
46
-
-
77957963526
-
Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library
-
Molina-Henares, M.A., Torre, J., García-Salamanca, A., Molina-Henares, A.J., Herrera, M.C., Ramos, J.L., and Duque, E. (2010) Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library. Environ Microbiol 12: 1468-1485.
-
(2010)
Environ Microbiol
, vol.12
, pp. 1468-1485
-
-
Molina-Henares, M.A.1
Torre, J.2
García-Salamanca, A.3
Molina-Henares, A.J.4
Herrera, M.C.5
Ramos, J.L.6
Duque, E.7
-
47
-
-
0003742927
-
-
Sunderland, MA, USA: Sinauer Associates.
-
Neidhardt, F.C., Ingraham, J.L., and Schaechter, M. (1990) Physiology of the Bacterial Cell: A Molecular Approach. Sunderland, MA, USA: Sinauer Associates.
-
(1990)
Physiology of the Bacterial Cell: A Molecular Approach
-
-
Neidhardt, F.C.1
Ingraham, J.L.2
Schaechter, M.3
-
48
-
-
0036933705
-
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
-
Nelson, K.E., Weinel, C., Paulsen, I.T., Dodson, R.J., Hilbert, H., Martins dos Santos, V.A.P., etal. (2002) Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environ Microbiol 4: 799-808.
-
(2002)
Environ Microbiol
, vol.4
, pp. 799-808
-
-
Nelson, K.E.1
Weinel, C.2
Paulsen, I.T.3
Dodson, R.J.4
Hilbert, H.5
Martins dos Santos, V.A.P.6
-
49
-
-
38049156419
-
Poly(3-hydroxybutyrate) synthesis from glycerol by a recombinant Escherichia coli arcA mutant in fed-batch microaerobic cultures
-
Nikel, P.I., Pettinari, M.J., Galvagno, M.A., and Méndez, B.S. (2008a) Poly(3-hydroxybutyrate) synthesis from glycerol by a recombinant Escherichia coli arcA mutant in fed-batch microaerobic cultures. Appl Microbiol Biotechnol 77: 1337-1343.
-
(2008)
Appl Microbiol Biotechnol
, vol.77
, pp. 1337-1343
-
-
Nikel, P.I.1
Pettinari, M.J.2
Galvagno, M.A.3
Méndez, B.S.4
-
50
-
-
38049159079
-
Escherichia coli arcA mutants: metabolic profile characterization of microaerobic cultures using glycerol as a carbon source
-
Nikel, P.I., Pettinari, M.J., Ramirez, M.C., Galvagno, M.A., and Méndez, B.S. (2008b) Escherichia coli arcA mutants: metabolic profile characterization of microaerobic cultures using glycerol as a carbon source. J Mol Microbiol Biotechnol 15: 48-54.
-
(2008)
J Mol Microbiol Biotechnol
, vol.15
, pp. 48-54
-
-
Nikel, P.I.1
Pettinari, M.J.2
Ramirez, M.C.3
Galvagno, M.A.4
Méndez, B.S.5
-
51
-
-
54449092307
-
A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory
-
Nogales, J., Palsson, B., and Thiele, I. (2008) A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory. BMC Syst Biol 2: 79.
-
(2008)
BMC Syst Biol
, vol.2
, pp. 79
-
-
Nogales, J.1
Palsson, B.2
Thiele, I.3
-
52
-
-
84864010986
-
The Entner-Doudoroff pathway is obligatory for gluconate utilization and contributes to the pathogenicity of Vibrio cholerae
-
Patra, T., Koley, H., Ramamurthy, T., Ghose, A.C., and Nandy, R.K. (2012) The Entner-Doudoroff pathway is obligatory for gluconate utilization and contributes to the pathogenicity of Vibrio cholerae. J Bacteriol 194: 3377-3385.
-
(2012)
J Bacteriol
, vol.194
, pp. 3377-3385
-
-
Patra, T.1
Koley, H.2
Ramamurthy, T.3
Ghose, A.C.4
Nandy, R.K.5
-
53
-
-
0032464663
-
What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli
-
Peekhaus, N., and Conway, T. (1998) What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli. J Bacteriol 180: 3495-3502.
-
(1998)
J Bacteriol
, vol.180
, pp. 3495-3502
-
-
Peekhaus, N.1
Conway, T.2
-
54
-
-
84859971346
-
Genomic analysis of the potential for aromatic compounds biodegradation in Burkholderiales
-
Pérez-Pantoja, D., Donoso, R., Agulló, L., Córdova, M., Seeger, M., Pieper, D.H., and González, B. (2012) Genomic analysis of the potential for aromatic compounds biodegradation in Burkholderiales. Environ Microbiol 14: 1091-1117.
-
(2012)
Environ Microbiol
, vol.14
, pp. 1091-1117
-
-
Pérez-Pantoja, D.1
Donoso, R.2
Agulló, L.3
Córdova, M.4
Seeger, M.5
Pieper, D.H.6
González, B.7
-
55
-
-
72449174430
-
Diamide triggers mainly S thiolations in the cytoplasmic proteomes of Bacillus subtilis and Staphylococcus aureus
-
Pöther, D.C., Liebeke, M., Hochgräfe, F., Antelmann, H., Becher, D., Lalk, M., etal. (2009) Diamide triggers mainly S thiolations in the cytoplasmic proteomes of Bacillus subtilis and Staphylococcus aureus. J Bacteriol 191: 7520-7530.
-
(2009)
J Bacteriol
, vol.191
, pp. 7520-7530
-
-
Pöther, D.C.1
Liebeke, M.2
Hochgräfe, F.3
Antelmann, H.4
Becher, D.5
Lalk, M.6
-
56
-
-
55449096123
-
Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology
-
Puchałka, J., Oberhardt, M.A., Godinho, M., Bielecka, A., Regenhardt, D., Timmis, K.N., etal. (2008) Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology. PLoS Comput Biol 4: e1000210.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Puchałka, J.1
Oberhardt, M.A.2
Godinho, M.3
Bielecka, A.4
Regenhardt, D.5
Timmis, K.N.6
-
57
-
-
63749099765
-
Responses of Pseudomonas to small toxic molecules by a mosaic of domains
-
Ramos, J.L., Krell, T., Daniels, C., Segura, A., and Duque, E. (2009) Responses of Pseudomonas to small toxic molecules by a mosaic of domains. Curr Opin Microbiol 12: 215-220.
-
(2009)
Curr Opin Microbiol
, vol.12
, pp. 215-220
-
-
Ramos, J.L.1
Krell, T.2
Daniels, C.3
Segura, A.4
Duque, E.5
-
58
-
-
0037199968
-
Hierarchical organization of modularity in metabolic networks
-
Ravasz, E., Somera, A.L., Mongru, D.A., Oltvai, Z.N., and Barabási, A.L. (2002) Hierarchical organization of modularity in metabolic networks. Science 297: 1551-1555.
-
(2002)
Science
, vol.297
, pp. 1551-1555
-
-
Ravasz, E.1
Somera, A.L.2
Mongru, D.A.3
Oltvai, Z.N.4
Barabási, A.L.5
-
59
-
-
84868332152
-
Mutational analysis of the pentose phosphate and Entner-Doudoroff pathways in Gluconobacter oxydans reveals improved growth of a Δedd Δeda mutant on mannitol
-
Richhardt, J., Bringer, S., and Bott, M. (2012) Mutational analysis of the pentose phosphate and Entner-Doudoroff pathways in Gluconobacter oxydans reveals improved growth of a Δedd Δeda mutant on mannitol. Appl Environ Microbiol 78: 6975-6986.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 6975-6986
-
-
Richhardt, J.1
Bringer, S.2
Bott, M.3
-
60
-
-
0029795209
-
Evolution of carbohydrate metabolic pathways
-
Romano, A.H., and Conway, T. (1996) Evolution of carbohydrate metabolic pathways. Res Microbiol 147: 448-455.
-
(1996)
Res Microbiol
, vol.147
, pp. 448-455
-
-
Romano, A.H.1
Conway, T.2
-
61
-
-
0035748547
-
The biochemical properties and phylogenies of phosphofructokinases from extremophiles
-
Ronimus, R.S., and Morgan, H.W. (2001) The biochemical properties and phylogenies of phosphofructokinases from extremophiles. Extremophiles 5: 357-373.
-
(2001)
Extremophiles
, vol.5
, pp. 357-373
-
-
Ronimus, R.S.1
Morgan, H.W.2
-
63
-
-
79959310042
-
Novel metabolic pathways in Archaea
-
Sato, T., and Atomi, H. (2011) Novel metabolic pathways in Archaea. Curr Opin Microbiol 14: 307-314.
-
(2011)
Curr Opin Microbiol
, vol.14
, pp. 307-314
-
-
Sato, T.1
Atomi, H.2
-
64
-
-
0017328471
-
Pathways of d-fructose catabolism in species of Pseudomonas
-
Sawyer, M.H., Baumann, P., Baumann, L., Berman, S.M., Cánovas, J.L., and Berman, R.H. (1977) Pathways of d-fructose catabolism in species of Pseudomonas. Arch Microbiol 112: 49-55.
-
(1977)
Arch Microbiol
, vol.112
, pp. 49-55
-
-
Sawyer, M.H.1
Baumann, P.2
Baumann, L.3
Berman, S.M.4
Cánovas, J.L.5
Berman, R.H.6
-
65
-
-
0030972707
-
Catabolism of d-glucose by Pseudomonas putida U occurs via extracellular transformation into d-gluconic acid and induction of a specific gluconate transport system
-
Schleissner, C., Reglero, A., and Luengo, J.M. (1997) Catabolism of d-glucose by Pseudomonas putida U occurs via extracellular transformation into d-gluconic acid and induction of a specific gluconate transport system. Microbiology 143: 1595-1603.
-
(1997)
Microbiology
, vol.143
, pp. 1595-1603
-
-
Schleissner, C.1
Reglero, A.2
Luengo, J.M.3
-
66
-
-
0033995794
-
Sulfur metabolism in Escherichia coli and related bacteria: facts and fiction
-
Sekowska, A., Kung, H.F., and Danchin, A. (2000) Sulfur metabolism in Escherichia coli and related bacteria: facts and fiction. J Mol Microbiol Biotechnol 2: 145-177.
-
(2000)
J Mol Microbiol Biotechnol
, vol.2
, pp. 145-177
-
-
Sekowska, A.1
Kung, H.F.2
Danchin, A.3
-
67
-
-
34548563918
-
Oxidative stress evokes a metabolic adaptation that favors increased NADPH synthesis and decreased NADH production in Pseudomonas fluorescens
-
Singh, R., Mailloux, R.J., Puiseux-Dao, S., and Appanna, V.D. (2007) Oxidative stress evokes a metabolic adaptation that favors increased NADPH synthesis and decreased NADH production in Pseudomonas fluorescens. J Bacteriol 189: 6665-6675.
-
(2007)
J Bacteriol
, vol.189
, pp. 6665-6675
-
-
Singh, R.1
Mailloux, R.J.2
Puiseux-Dao, S.3
Appanna, V.D.4
-
68
-
-
77954714441
-
In silico genome-scale metabolic analysis of Pseudomonas putida KT2440 for polyhydroxyalkanoate synthesis, degradation of aromatics and anaerobic survival
-
Sohn, S.B., Kim, T.Y., Park, J.M., and Lee, S.Y. (2010) In silico genome-scale metabolic analysis of Pseudomonas putida KT2440 for polyhydroxyalkanoate synthesis, degradation of aromatics and anaerobic survival. Biotechnol J 5: 739-750.
-
(2010)
Biotechnol J
, vol.5
, pp. 739-750
-
-
Sohn, S.B.1
Kim, T.Y.2
Park, J.M.3
Lee, S.Y.4
-
69
-
-
0028884775
-
Genetics of pentose-phosphate pathway enzymes of Escherichia coli K-12
-
Sprenger, G.A. (1995) Genetics of pentose-phosphate pathway enzymes of Escherichia coli K-12. Arch Microbiol 164: 324-330.
-
(1995)
Arch Microbiol
, vol.164
, pp. 324-330
-
-
Sprenger, G.A.1
-
70
-
-
0022534455
-
Expression of the Escherichia coli pfkA gene in Alcaligenes eutrophus and in other Gram-negative bacteria
-
Steinbüchel, A. (1986) Expression of the Escherichia coli pfkA gene in Alcaligenes eutrophus and in other Gram-negative bacteria. J Bacteriol 166: 319-327.
-
(1986)
J Bacteriol
, vol.166
, pp. 319-327
-
-
Steinbüchel, A.1
-
71
-
-
0025789755
-
Bacteriophage-mediated generalized transduction in Escherichia coli and Salmonella typhimurium
-
Sternberg, N.L., and Maurer, R. (1991) Bacteriophage-mediated generalized transduction in Escherichia coli and Salmonella typhimurium. Methods Enzymol 204: 18-43.
-
(1991)
Methods Enzymol
, vol.204
, pp. 18-43
-
-
Sternberg, N.L.1
Maurer, R.2
-
73
-
-
0024990382
-
Bacterial defenses against oxidative stress
-
Storz, G., Tartaglia, L.A., Farr, S.B., and Ames, B.N. (1990) Bacterial defenses against oxidative stress. Trends Genet 6: 363-368.
-
(1990)
Trends Genet
, vol.6
, pp. 363-368
-
-
Storz, G.1
Tartaglia, L.A.2
Farr, S.B.3
Ames, B.N.4
-
75
-
-
0015813923
-
Glucolysis in Pseudomonas putida: physiological role of alternative routes from the analysis of defective mutants
-
Vicente, M., and Cánovas, J.L. (1973a) Glucolysis in Pseudomonas putida: physiological role of alternative routes from the analysis of defective mutants. J Bacteriol 116: 908-914.
-
(1973)
J Bacteriol
, vol.116
, pp. 908-914
-
-
Vicente, M.1
Cánovas, J.L.2
-
76
-
-
0015892003
-
Regulation of the glucolytic enzymes in Pseudomonas putida
-
Vicente, M., and Cánovas, J.L. (1973b) Regulation of the glucolytic enzymes in Pseudomonas putida. Arch Microbiol 93: 53-64.
-
(1973)
Arch Microbiol
, vol.93
, pp. 53-64
-
-
Vicente, M.1
Cánovas, J.L.2
-
77
-
-
0014748743
-
Effect of the thiol-oxidizing agent diamide on the growth of Escherichia coli
-
Wax, R., Rosenberg, E., Kosower, N.S., and Kosower, E.M. (1970) Effect of the thiol-oxidizing agent diamide on the growth of Escherichia coli. J Bacteriol 101: 1092-1093.
-
(1970)
J Bacteriol
, vol.101
, pp. 1092-1093
-
-
Wax, R.1
Rosenberg, E.2
Kosower, N.S.3
Kosower, E.M.4
-
78
-
-
37549068090
-
+/NADPH in cellular functions and cell death: regulation and biological consequences
-
+/NADPH in cellular functions and cell death: regulation and biological consequences. Antioxid Redox Signal 10: 179-206.
-
(2008)
Antioxid Redox Signal
, vol.10
, pp. 179-206
-
-
Ying, W.1
|