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Volumn 15, Issue 6, 2013, Pages 1772-1785

The Entner-Doudoroff pathway empowers Pseudomonas putidaKT2440 with a high tolerance to oxidative stress

Author keywords

[No Author keywords available]

Indexed keywords

6 PHOSPHOFRUCTOKINASE; DIAMIDE; HYDROGEN PEROXIDE; NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE; OXIDIZING AGENT;

EID: 84878639396     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/1462-2920.12069     Document Type: Article
Times cited : (177)

References (78)
  • 2
    • 0019805971 scopus 로고
    • Specific purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas
    • Bagdasarian, M., Lurz, R., Rückert, B., Franklin, F.C.H., Bagdasarian, M.M., Frey, J., and Timmis, K.N. (1981) Specific purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene 16: 237-247.
    • (1981) Gene , vol.16 , pp. 237-247
    • Bagdasarian, M.1    Lurz, R.2    Rückert, B.3    Franklin, F.C.H.4    Bagdasarian, M.M.5    Frey, J.6    Timmis, K.N.7
  • 3
    • 0015260263 scopus 로고
    • Quantitative extraction and estimation of intracellular nucleoside triphosphates of Escherichia coli
    • Bagnara, A.S., and Finch, L.R. (1972) Quantitative extraction and estimation of intracellular nucleoside triphosphates of Escherichia coli. Anal Biochem 45: 24-34.
    • (1972) Anal Biochem , vol.45 , pp. 24-34
    • Bagnara, A.S.1    Finch, L.R.2
  • 4
    • 84861422324 scopus 로고    scopus 로고
    • Rethinking glycolysis: on the biochemical logic of metabolic pathways
    • Bar-Even, A., Flamholz, A., Noor, E., and Milo, R. (2012) Rethinking glycolysis: on the biochemical logic of metabolic pathways. Nat Chem Biol 8: 509-517.
    • (2012) Nat Chem Biol , vol.8 , pp. 509-517
    • Bar-Even, A.1    Flamholz, A.2    Noor, E.3    Milo, R.4
  • 5
    • 64049094359 scopus 로고    scopus 로고
    • Escherichia coli O157:H7 glutamate- and arginine-dependent acid-resistance systems protect against oxidative stress during extreme acid challenge
    • Bearson, B.L., Lee, I.S., and Casey, T.A. (2009) Escherichia coli O157:H7 glutamate- and arginine-dependent acid-resistance systems protect against oxidative stress during extreme acid challenge. Microbiology 155: 805-812.
    • (2009) Microbiology , vol.155 , pp. 805-812
    • Bearson, B.L.1    Lee, I.S.2    Casey, T.A.3
  • 6
    • 0029787379 scopus 로고    scopus 로고
    • The mechanism of the auxotrophy for sulfur-containing amino acids imposed upon Escherichia coli by superoxide
    • Benov, L., Kredich, N.M., and Fridovich, I. (1996) The mechanism of the auxotrophy for sulfur-containing amino acids imposed upon Escherichia coli by superoxide. J Biol Chem 271: 21037-21040.
    • (1996) J Biol Chem , vol.271 , pp. 21037-21040
    • Benov, L.1    Kredich, N.M.2    Fridovich, I.3
  • 7
    • 0015888084 scopus 로고
    • An improved cycling assay for nicotinamide adenine dinucleotide
    • Bernofsky, C., and Swan, M. (1973) An improved cycling assay for nicotinamide adenine dinucleotide. Anal Biochem 53: 452-458.
    • (1973) Anal Biochem , vol.53 , pp. 452-458
    • Bernofsky, C.1    Swan, M.2
  • 8
    • 52449130902 scopus 로고    scopus 로고
    • Metabolic response of Pseudomonas putida during redox biocatalysis in the presence of a second octanol phase
    • Blank, L.M., Ionidis, G., Ebert, B.E., Bühler, B., and Schmid, A. (2008) Metabolic response of Pseudomonas putida during redox biocatalysis in the presence of a second octanol phase. FEBS J 275: 5173-5190.
    • (2008) FEBS J , vol.275 , pp. 5173-5190
    • Blank, L.M.1    Ionidis, G.2    Ebert, B.E.3    Bühler, B.4    Schmid, A.5
  • 9
    • 77954141406 scopus 로고    scopus 로고
    • Redox biocatalysis and metabolism: molecular mechanisms and metabolic network analysis
    • Blank, L.M., Ebert, B.E., Buehler, K., and Bühler, B. (2010) Redox biocatalysis and metabolism: molecular mechanisms and metabolic network analysis. Antioxid Redox Signal 13: 349-394.
    • (2010) Antioxid Redox Signal , vol.13 , pp. 349-394
    • Blank, L.M.1    Ebert, B.E.2    Buehler, K.3    Bühler, B.4
  • 10
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M.M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 11
    • 0036795791 scopus 로고    scopus 로고
    • Engineering of primary carbon metabolism for improved antibiotic production in Streptomyces lividans
    • Butler, M.J., Bruheim, P., Jovetic, S., Marinelli, F., Postma, P.W., and Bibb, M.J. (2002) Engineering of primary carbon metabolism for improved antibiotic production in Streptomyces lividans. Appl Environ Microbiol 68: 4731-4739.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 4731-4739
    • Butler, M.J.1    Bruheim, P.2    Jovetic, S.3    Marinelli, F.4    Postma, P.W.5    Bibb, M.J.6
  • 12
    • 0033767925 scopus 로고    scopus 로고
    • Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and Saccharomyces cerevisiae responses to oxidative stress
    • Carmel-Harel, O., and Storz, G. (2000) Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and Saccharomyces cerevisiae responses to oxidative stress. Annu Rev Microbiol 54: 439-461.
    • (2000) Annu Rev Microbiol , vol.54 , pp. 439-461
    • Carmel-Harel, O.1    Storz, G.2
  • 13
    • 34447522100 scopus 로고    scopus 로고
    • Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: genomic and flux analysis
    • del Castillo, T., Ramos, J.L., Rodríguez-Herva, J.J., Fuhrer, T., Sauer, U., and Duque, E. (2007) Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: genomic and flux analysis. J Bacteriol 189: 5142-5152.
    • (2007) J Bacteriol , vol.189 , pp. 5142-5152
    • del Castillo, T.1    Ramos, J.L.2    Rodríguez-Herva, J.J.3    Fuhrer, T.4    Sauer, U.5    Duque, E.6
  • 14
    • 79953228862 scopus 로고    scopus 로고
    • Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida
    • Chavarría, M., Santiago, C., Platero, R., Krell, T., Casasnovas, J.M., and de Lorenzo, V. (2011) Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida. J Biol Chem 286: 9351-9359.
    • (2011) J Biol Chem , vol.286 , pp. 9351-9359
    • Chavarría, M.1    Santiago, C.2    Platero, R.3    Krell, T.4    de Casasnovas, J.M.5    Lorenzo, V.6
  • 15
    • 84860532358 scopus 로고    scopus 로고
    • Regulatory tasks of the phosphoenolpyruvate-phosphotransferase system of Pseudomonas putida in central carbon metabolism
    • Chavarría, M., Kleijn, R.J., Sauer, U., Pflüger-Grau, K., and de Lorenzo, V. (2012a) Regulatory tasks of the phosphoenolpyruvate-phosphotransferase system of Pseudomonas putida in central carbon metabolism. mBio 3: e00028-e00012.
    • (2012) mBio , vol.3
    • Chavarría, M.1    Kleijn, R.J.2    Sauer, U.3    de Pflüger-Grau, K.4    Lorenzo, V.5
  • 16
    • 84871936294 scopus 로고    scopus 로고
    • Cra regulates the cross-talk between the two branches of the phosphoenolpyruvate:phosphotransferase system of Pseudomonas putida
    • DOI: 10.1111/j.1462-2920.2012.02808.x.
    • Chavarría, M., Fuhrer, T., Sauer, U., Pflüger-Grau, K., and de Lorenzo, V. (2012b) Cra regulates the cross-talk between the two branches of the phosphoenolpyruvate:phosphotransferase system of Pseudomonas putida. Environ Microbiol (In Press). DOI: 10.1111/j.1462-2920.2012.02808.x.
    • (2012) Environ Microbiol
    • Chavarría, M.1    Fuhrer, T.2    Sauer, U.3    de Pflüger-Grau, K.4    Lorenzo, V.5
  • 17
    • 32244448730 scopus 로고    scopus 로고
    • A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation
    • Choi, K.H., Kumar, A., and Schweizer, H.P. (2006) A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. J Microbiol Methods 64: 391-397.
    • (2006) J Microbiol Methods , vol.64 , pp. 391-397
    • Choi, K.H.1    Kumar, A.2    Schweizer, H.P.3
  • 18
    • 0026913168 scopus 로고
    • The Entner-Doudoroff pathway: history, physiology and molecular biology
    • Conway, T. (1992) The Entner-Doudoroff pathway: history, physiology and molecular biology. FEMS Microbiol Rev 9: 1-27.
    • (1992) FEMS Microbiol Rev , vol.9 , pp. 1-27
    • Conway, T.1
  • 19
    • 2542469551 scopus 로고    scopus 로고
    • Protein disulfide bond formation in the cytoplasm during oxidative stress
    • Cumming, R.C., Andon, N.L., Haynes, P.A., Park, M., Fischer, W.H., and Schubert, D. (2004) Protein disulfide bond formation in the cytoplasm during oxidative stress. J Biol Chem 279: 21749-21758.
    • (2004) J Biol Chem , vol.279 , pp. 21749-21758
    • Cumming, R.C.1    Andon, N.L.2    Haynes, P.A.3    Park, M.4    Fischer, W.H.5    Schubert, D.6
  • 20
    • 0035211224 scopus 로고    scopus 로고
    • Comparison of maximum specific growth rates and lag times estimated from absorbance and viable count data by different mathematical models
    • Dalgaard, P., and Koutsoumanis, K. (2001) Comparison of maximum specific growth rates and lag times estimated from absorbance and viable count data by different mathematical models. J Microbiol Methods 43: 183-196.
    • (2001) J Microbiol Methods , vol.43 , pp. 183-196
    • Dalgaard, P.1    Koutsoumanis, K.2
  • 21
    • 0042254990 scopus 로고
    • Comparative carbohydrate metabolism and localization of enzymes in Pseudomonas and related micro-organisms
    • De Ley, J. (1960) Comparative carbohydrate metabolism and localization of enzymes in Pseudomonas and related micro-organisms. J Appl Bacteriol 23: 400-441.
    • (1960) J Appl Bacteriol , vol.23 , pp. 400-441
    • De Ley, J.1
  • 22
    • 0026335852 scopus 로고
    • Regulation of bacterial oxidative stress genes
    • Demple, B. (1991) Regulation of bacterial oxidative stress genes. Annu Rev Genet 25: 315-337.
    • (1991) Annu Rev Genet , vol.25 , pp. 315-337
    • Demple, B.1
  • 24
    • 80052787409 scopus 로고    scopus 로고
    • Response of Pseudomonas putida KT2440 to increased NADH and ATP demand
    • Ebert, B.E., Kurth, F., Grund, M., Blank, L.M., and Schmid, A. (2011) Response of Pseudomonas putida KT2440 to increased NADH and ATP demand. Appl Environ Microbiol 77: 6597-6605.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 6597-6605
    • Ebert, B.E.1    Kurth, F.2    Grund, M.3    Blank, L.M.4    Schmid, A.5
  • 25
    • 76949122636 scopus 로고
    • Glucose and gluconic acid oxidation of Pseudomonas saccharophila
    • Entner, N., and Doudoroff, M. (1952) Glucose and gluconic acid oxidation of Pseudomonas saccharophila. J Biol Chem 196: 853-862.
    • (1952) J Biol Chem , vol.196 , pp. 853-862
    • Entner, N.1    Doudoroff, M.2
  • 26
    • 84862171231 scopus 로고    scopus 로고
    • The metabolic blueprint of Phaeodactylum tricornutum reveals a eukaryotic Entner-Doudoroff glycolytic pathway
    • Fabris, M., Matthijs, M., Rombauts, S., Vyverman, W., Goossens, A., and Baart, G.J.E. (2012) The metabolic blueprint of Phaeodactylum tricornutum reveals a eukaryotic Entner-Doudoroff glycolytic pathway. Plant J 70: 1004-1014.
    • (2012) Plant J , vol.70 , pp. 1004-1014
    • Fabris, M.1    Matthijs, M.2    Rombauts, S.3    Vyverman, W.4    Goossens, A.5    Baart, G.J.E.6
  • 27
    • 80054757000 scopus 로고    scopus 로고
    • Microbial degradation of aromatic compounds - from one strategy to four
    • Fuchs, G., Boll, M., and Heider, J. (2011) Microbial degradation of aromatic compounds - from one strategy to four. Nat Rev Microbiol 9: 803-816.
    • (2011) Nat Rev Microbiol , vol.9 , pp. 803-816
    • Fuchs, G.1    Boll, M.2    Heider, J.3
  • 28
    • 64049099490 scopus 로고    scopus 로고
    • Different biochemical mechanisms ensure network-wide balancing of reducing equivalents in microbial metabolism
    • Fuhrer, T., and Sauer, U. (2009) Different biochemical mechanisms ensure network-wide balancing of reducing equivalents in microbial metabolism. J Bacteriol 191: 2112-2121.
    • (2009) J Bacteriol , vol.191 , pp. 2112-2121
    • Fuhrer, T.1    Sauer, U.2
  • 29
    • 14244256095 scopus 로고    scopus 로고
    • Experimental identification and quantification of glucose metabolism in seven bacterial species
    • Fuhrer, T., Fischer, E., and Sauer, U. (2005) Experimental identification and quantification of glucose metabolism in seven bacterial species. J Bacteriol 187: 1581-1590.
    • (2005) J Bacteriol , vol.187 , pp. 1581-1590
    • Fuhrer, T.1    Fischer, E.2    Sauer, U.3
  • 30
    • 77952569352 scopus 로고    scopus 로고
    • Glucose metabolism in Legionella pneumophila: dependence on the Entner-Doudoroff pathway and connection with intracellular bacterial growth
    • Harada, E., Iida, K.I., Shiota, S., Nakayama, H., and Yoshida, S.I. (2010) Glucose metabolism in Legionella pneumophila: dependence on the Entner-Doudoroff pathway and connection with intracellular bacterial growth. J Bacteriol 192: 2892-2899.
    • (2010) J Bacteriol , vol.192 , pp. 2892-2899
    • Harada, E.1    Iida, K.I.2    Shiota, S.3    Nakayama, H.4    Yoshida, S.I.5
  • 31
    • 0016909331 scopus 로고
    • The significance of phosphofructokinase to the regulation of carbohydrate metabolism
    • Hofmann, E. (1976) The significance of phosphofructokinase to the regulation of carbohydrate metabolism. Rev Physiol Biochem Pharmacol 75: 1-68.
    • (1976) Rev Physiol Biochem Pharmacol , vol.75 , pp. 1-68
    • Hofmann, E.1
  • 32
    • 14044271464 scopus 로고    scopus 로고
    • Oxidative stress inactivates cobalamin-independent methionine synthase (MetE) in Escherichia coli
    • Hondorp, E.R., and Matthews, R.G. (2004) Oxidative stress inactivates cobalamin-independent methionine synthase (MetE) in Escherichia coli. PLoS Biol 2: e336.
    • (2004) PLoS Biol , vol.2
    • Hondorp, E.R.1    Matthews, R.G.2
  • 33
    • 50649117912 scopus 로고    scopus 로고
    • Cellular defenses against superoxide and hydrogen peroxide
    • Imlay, J.A. (2008) Cellular defenses against superoxide and hydrogen peroxide. Annu Rev Biochem 77: 755-776.
    • (2008) Annu Rev Biochem , vol.77 , pp. 755-776
    • Imlay, J.A.1
  • 34
    • 0029844594 scopus 로고    scopus 로고
    • Importance of catalase in the adaptive response to hydrogen peroxide: analysis of acatalasaemic Saccharomyces cerevisiae
    • Izawa, S., Inoue, Y., and Kimura, A. (1996) Importance of catalase in the adaptive response to hydrogen peroxide: analysis of acatalasaemic Saccharomyces cerevisiae. Biochem J 320: 61-67.
    • (1996) Biochem J , vol.320 , pp. 61-67
    • Izawa, S.1    Inoue, Y.2    Kimura, A.3
  • 35
    • 84863470139 scopus 로고    scopus 로고
    • Effect of modified glucose catabolism on xanthan production in Xanthomonas oryzae pv. oryzae
    • Jang, S.G., Lee, B.M., and Cho, J.Y. (2012) Effect of modified glucose catabolism on xanthan production in Xanthomonas oryzae pv. oryzae. J Ind Microbiol Biotechnol 39: 649-654.
    • (2012) J Ind Microbiol Biotechnol , vol.39 , pp. 649-654
    • Jang, S.G.1    Lee, B.M.2    Cho, J.Y.3
  • 36
    • 35848947748 scopus 로고    scopus 로고
    • Why metabolic enzymes are essential or nonessential for growth of Escherichia coli K12 on glucose
    • Kim, J., and Copley, S.D. (2007) Why metabolic enzymes are essential or nonessential for growth of Escherichia coli K12 on glucose. Biochemistry 46: 12501-12511.
    • (2007) Biochemistry , vol.46 , pp. 12501-12511
    • Kim, J.1    Copley, S.D.2
  • 37
    • 58949096129 scopus 로고    scopus 로고
    • Dual regulation of zwf-1 by both 2-keto-3-deoxy-6-phosphogluconate and oxidative stress in Pseudomonas putida
    • Kim, J., Jeon, C.O., and Park, W. (2008) Dual regulation of zwf-1 by both 2-keto-3-deoxy-6-phosphogluconate and oxidative stress in Pseudomonas putida. Microbiology 154: 3905-3916.
    • (2008) Microbiology , vol.154 , pp. 3905-3916
    • Kim, J.1    Jeon, C.O.2    Park, W.3
  • 38
    • 0029006990 scopus 로고
    • Diamide: an oxidant probe for thiols
    • Kosower, N.S., and Kosower, E.M. (1995) Diamide: an oxidant probe for thiols. Methods Enzymol 251: 123-133.
    • (1995) Methods Enzymol , vol.251 , pp. 123-133
    • Kosower, N.S.1    Kosower, E.M.2
  • 39
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U.K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 40
    • 0031433014 scopus 로고    scopus 로고
    • Métabolisme carboné et énergétique des Pseudomonas spp fluorescents saprophytes à oxydase positive
    • Latour, X., and Lemanceau, P. (1997) Métabolisme carboné et énergétique des Pseudomonas spp fluorescents saprophytes à oxydase positive. Agronomie 17: 427-443.
    • (1997) Agronomie , vol.17 , pp. 427-443
    • Latour, X.1    Lemanceau, P.2
  • 41
    • 0027390501 scopus 로고
    • q/Ptrp-lac plasmids and transposons that confer conditional phenotypes
    • q/Ptrp-lac plasmids and transposons that confer conditional phenotypes. Gene 123: 17-24.
    • (1993) Gene , vol.123 , pp. 17-24
    • de Lorenzo, V.1    Eltis, L.2    Kessler, B.3    Timmis, K.N.4
  • 42
    • 84871430133 scopus 로고    scopus 로고
    • Microbial bioremediation of chemical pollutants: how bacteria cope with multi-stress environmental scenarios
    • Storz, G., and Hengge, R. (eds). Washington, DC, USA: ASM Press -.
    • Loza-Tavera, H., and de Lorenzo, V. (2011) Microbial bioremediation of chemical pollutants: how bacteria cope with multi-stress environmental scenarios. In Bacterial Stress Responses. Storz, G., and Hengge, R. (eds). Washington, DC, USA: ASM Press, pp. 481-492.
    • (2011) Bacterial Stress Responses , pp. 481-492
    • Loza-Tavera, H.1    de Lorenzo, V.2
  • 43
    • 0016791330 scopus 로고
    • Comparison of methods for extraction of bacterial adenine nucleotides determined by firefly assay
    • Lundin, A., and Thore, A. (1975) Comparison of methods for extraction of bacterial adenine nucleotides determined by firefly assay. Appl Microbiol 30: 713-721.
    • (1975) Appl Microbiol , vol.30 , pp. 713-721
    • Lundin, A.1    Thore, A.2
  • 44
    • 84860376514 scopus 로고    scopus 로고
    • Metabolic and regulatory rearrangements underlying efficient d-xylose utilization in engineered Pseudomonas putida S12
    • Meijnen, J.P., de Winde, J.H., and Ruijssenaars, H.J. (2012) Metabolic and regulatory rearrangements underlying efficient d-xylose utilization in engineered Pseudomonas putida S12. J Biol Chem 287: 14606-14614.
    • (2012) J Biol Chem , vol.287 , pp. 14606-14614
    • Meijnen, J.P.1    de Winde, J.H.2    Ruijssenaars, H.J.3
  • 45
    • 0003785155 scopus 로고
    • Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory.
    • Miller, J.H. (1972) Experiments in Molecular Genetics. Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory.
    • (1972) Experiments in Molecular Genetics
    • Miller, J.H.1
  • 46
    • 77957963526 scopus 로고    scopus 로고
    • Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library
    • Molina-Henares, M.A., Torre, J., García-Salamanca, A., Molina-Henares, A.J., Herrera, M.C., Ramos, J.L., and Duque, E. (2010) Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library. Environ Microbiol 12: 1468-1485.
    • (2010) Environ Microbiol , vol.12 , pp. 1468-1485
    • Molina-Henares, M.A.1    Torre, J.2    García-Salamanca, A.3    Molina-Henares, A.J.4    Herrera, M.C.5    Ramos, J.L.6    Duque, E.7
  • 49
    • 38049156419 scopus 로고    scopus 로고
    • Poly(3-hydroxybutyrate) synthesis from glycerol by a recombinant Escherichia coli arcA mutant in fed-batch microaerobic cultures
    • Nikel, P.I., Pettinari, M.J., Galvagno, M.A., and Méndez, B.S. (2008a) Poly(3-hydroxybutyrate) synthesis from glycerol by a recombinant Escherichia coli arcA mutant in fed-batch microaerobic cultures. Appl Microbiol Biotechnol 77: 1337-1343.
    • (2008) Appl Microbiol Biotechnol , vol.77 , pp. 1337-1343
    • Nikel, P.I.1    Pettinari, M.J.2    Galvagno, M.A.3    Méndez, B.S.4
  • 50
    • 38049159079 scopus 로고    scopus 로고
    • Escherichia coli arcA mutants: metabolic profile characterization of microaerobic cultures using glycerol as a carbon source
    • Nikel, P.I., Pettinari, M.J., Ramirez, M.C., Galvagno, M.A., and Méndez, B.S. (2008b) Escherichia coli arcA mutants: metabolic profile characterization of microaerobic cultures using glycerol as a carbon source. J Mol Microbiol Biotechnol 15: 48-54.
    • (2008) J Mol Microbiol Biotechnol , vol.15 , pp. 48-54
    • Nikel, P.I.1    Pettinari, M.J.2    Ramirez, M.C.3    Galvagno, M.A.4    Méndez, B.S.5
  • 51
    • 54449092307 scopus 로고    scopus 로고
    • A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory
    • Nogales, J., Palsson, B., and Thiele, I. (2008) A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory. BMC Syst Biol 2: 79.
    • (2008) BMC Syst Biol , vol.2 , pp. 79
    • Nogales, J.1    Palsson, B.2    Thiele, I.3
  • 52
    • 84864010986 scopus 로고    scopus 로고
    • The Entner-Doudoroff pathway is obligatory for gluconate utilization and contributes to the pathogenicity of Vibrio cholerae
    • Patra, T., Koley, H., Ramamurthy, T., Ghose, A.C., and Nandy, R.K. (2012) The Entner-Doudoroff pathway is obligatory for gluconate utilization and contributes to the pathogenicity of Vibrio cholerae. J Bacteriol 194: 3377-3385.
    • (2012) J Bacteriol , vol.194 , pp. 3377-3385
    • Patra, T.1    Koley, H.2    Ramamurthy, T.3    Ghose, A.C.4    Nandy, R.K.5
  • 53
    • 0032464663 scopus 로고    scopus 로고
    • What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli
    • Peekhaus, N., and Conway, T. (1998) What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli. J Bacteriol 180: 3495-3502.
    • (1998) J Bacteriol , vol.180 , pp. 3495-3502
    • Peekhaus, N.1    Conway, T.2
  • 55
    • 72449174430 scopus 로고    scopus 로고
    • Diamide triggers mainly S thiolations in the cytoplasmic proteomes of Bacillus subtilis and Staphylococcus aureus
    • Pöther, D.C., Liebeke, M., Hochgräfe, F., Antelmann, H., Becher, D., Lalk, M., etal. (2009) Diamide triggers mainly S thiolations in the cytoplasmic proteomes of Bacillus subtilis and Staphylococcus aureus. J Bacteriol 191: 7520-7530.
    • (2009) J Bacteriol , vol.191 , pp. 7520-7530
    • Pöther, D.C.1    Liebeke, M.2    Hochgräfe, F.3    Antelmann, H.4    Becher, D.5    Lalk, M.6
  • 56
    • 55449096123 scopus 로고    scopus 로고
    • Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology
    • Puchałka, J., Oberhardt, M.A., Godinho, M., Bielecka, A., Regenhardt, D., Timmis, K.N., etal. (2008) Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology. PLoS Comput Biol 4: e1000210.
    • (2008) PLoS Comput Biol , vol.4
    • Puchałka, J.1    Oberhardt, M.A.2    Godinho, M.3    Bielecka, A.4    Regenhardt, D.5    Timmis, K.N.6
  • 57
    • 63749099765 scopus 로고    scopus 로고
    • Responses of Pseudomonas to small toxic molecules by a mosaic of domains
    • Ramos, J.L., Krell, T., Daniels, C., Segura, A., and Duque, E. (2009) Responses of Pseudomonas to small toxic molecules by a mosaic of domains. Curr Opin Microbiol 12: 215-220.
    • (2009) Curr Opin Microbiol , vol.12 , pp. 215-220
    • Ramos, J.L.1    Krell, T.2    Daniels, C.3    Segura, A.4    Duque, E.5
  • 58
    • 0037199968 scopus 로고    scopus 로고
    • Hierarchical organization of modularity in metabolic networks
    • Ravasz, E., Somera, A.L., Mongru, D.A., Oltvai, Z.N., and Barabási, A.L. (2002) Hierarchical organization of modularity in metabolic networks. Science 297: 1551-1555.
    • (2002) Science , vol.297 , pp. 1551-1555
    • Ravasz, E.1    Somera, A.L.2    Mongru, D.A.3    Oltvai, Z.N.4    Barabási, A.L.5
  • 59
    • 84868332152 scopus 로고    scopus 로고
    • Mutational analysis of the pentose phosphate and Entner-Doudoroff pathways in Gluconobacter oxydans reveals improved growth of a Δedd Δeda mutant on mannitol
    • Richhardt, J., Bringer, S., and Bott, M. (2012) Mutational analysis of the pentose phosphate and Entner-Doudoroff pathways in Gluconobacter oxydans reveals improved growth of a Δedd Δeda mutant on mannitol. Appl Environ Microbiol 78: 6975-6986.
    • (2012) Appl Environ Microbiol , vol.78 , pp. 6975-6986
    • Richhardt, J.1    Bringer, S.2    Bott, M.3
  • 60
    • 0029795209 scopus 로고    scopus 로고
    • Evolution of carbohydrate metabolic pathways
    • Romano, A.H., and Conway, T. (1996) Evolution of carbohydrate metabolic pathways. Res Microbiol 147: 448-455.
    • (1996) Res Microbiol , vol.147 , pp. 448-455
    • Romano, A.H.1    Conway, T.2
  • 61
    • 0035748547 scopus 로고    scopus 로고
    • The biochemical properties and phylogenies of phosphofructokinases from extremophiles
    • Ronimus, R.S., and Morgan, H.W. (2001) The biochemical properties and phylogenies of phosphofructokinases from extremophiles. Extremophiles 5: 357-373.
    • (2001) Extremophiles , vol.5 , pp. 357-373
    • Ronimus, R.S.1    Morgan, H.W.2
  • 63
    • 79959310042 scopus 로고    scopus 로고
    • Novel metabolic pathways in Archaea
    • Sato, T., and Atomi, H. (2011) Novel metabolic pathways in Archaea. Curr Opin Microbiol 14: 307-314.
    • (2011) Curr Opin Microbiol , vol.14 , pp. 307-314
    • Sato, T.1    Atomi, H.2
  • 65
    • 0030972707 scopus 로고    scopus 로고
    • Catabolism of d-glucose by Pseudomonas putida U occurs via extracellular transformation into d-gluconic acid and induction of a specific gluconate transport system
    • Schleissner, C., Reglero, A., and Luengo, J.M. (1997) Catabolism of d-glucose by Pseudomonas putida U occurs via extracellular transformation into d-gluconic acid and induction of a specific gluconate transport system. Microbiology 143: 1595-1603.
    • (1997) Microbiology , vol.143 , pp. 1595-1603
    • Schleissner, C.1    Reglero, A.2    Luengo, J.M.3
  • 66
    • 0033995794 scopus 로고    scopus 로고
    • Sulfur metabolism in Escherichia coli and related bacteria: facts and fiction
    • Sekowska, A., Kung, H.F., and Danchin, A. (2000) Sulfur metabolism in Escherichia coli and related bacteria: facts and fiction. J Mol Microbiol Biotechnol 2: 145-177.
    • (2000) J Mol Microbiol Biotechnol , vol.2 , pp. 145-177
    • Sekowska, A.1    Kung, H.F.2    Danchin, A.3
  • 67
    • 34548563918 scopus 로고    scopus 로고
    • Oxidative stress evokes a metabolic adaptation that favors increased NADPH synthesis and decreased NADH production in Pseudomonas fluorescens
    • Singh, R., Mailloux, R.J., Puiseux-Dao, S., and Appanna, V.D. (2007) Oxidative stress evokes a metabolic adaptation that favors increased NADPH synthesis and decreased NADH production in Pseudomonas fluorescens. J Bacteriol 189: 6665-6675.
    • (2007) J Bacteriol , vol.189 , pp. 6665-6675
    • Singh, R.1    Mailloux, R.J.2    Puiseux-Dao, S.3    Appanna, V.D.4
  • 68
    • 77954714441 scopus 로고    scopus 로고
    • In silico genome-scale metabolic analysis of Pseudomonas putida KT2440 for polyhydroxyalkanoate synthesis, degradation of aromatics and anaerobic survival
    • Sohn, S.B., Kim, T.Y., Park, J.M., and Lee, S.Y. (2010) In silico genome-scale metabolic analysis of Pseudomonas putida KT2440 for polyhydroxyalkanoate synthesis, degradation of aromatics and anaerobic survival. Biotechnol J 5: 739-750.
    • (2010) Biotechnol J , vol.5 , pp. 739-750
    • Sohn, S.B.1    Kim, T.Y.2    Park, J.M.3    Lee, S.Y.4
  • 69
    • 0028884775 scopus 로고
    • Genetics of pentose-phosphate pathway enzymes of Escherichia coli K-12
    • Sprenger, G.A. (1995) Genetics of pentose-phosphate pathway enzymes of Escherichia coli K-12. Arch Microbiol 164: 324-330.
    • (1995) Arch Microbiol , vol.164 , pp. 324-330
    • Sprenger, G.A.1
  • 70
    • 0022534455 scopus 로고
    • Expression of the Escherichia coli pfkA gene in Alcaligenes eutrophus and in other Gram-negative bacteria
    • Steinbüchel, A. (1986) Expression of the Escherichia coli pfkA gene in Alcaligenes eutrophus and in other Gram-negative bacteria. J Bacteriol 166: 319-327.
    • (1986) J Bacteriol , vol.166 , pp. 319-327
    • Steinbüchel, A.1
  • 71
    • 0025789755 scopus 로고
    • Bacteriophage-mediated generalized transduction in Escherichia coli and Salmonella typhimurium
    • Sternberg, N.L., and Maurer, R. (1991) Bacteriophage-mediated generalized transduction in Escherichia coli and Salmonella typhimurium. Methods Enzymol 204: 18-43.
    • (1991) Methods Enzymol , vol.204 , pp. 18-43
    • Sternberg, N.L.1    Maurer, R.2
  • 75
    • 0015813923 scopus 로고
    • Glucolysis in Pseudomonas putida: physiological role of alternative routes from the analysis of defective mutants
    • Vicente, M., and Cánovas, J.L. (1973a) Glucolysis in Pseudomonas putida: physiological role of alternative routes from the analysis of defective mutants. J Bacteriol 116: 908-914.
    • (1973) J Bacteriol , vol.116 , pp. 908-914
    • Vicente, M.1    Cánovas, J.L.2
  • 76
    • 0015892003 scopus 로고
    • Regulation of the glucolytic enzymes in Pseudomonas putida
    • Vicente, M., and Cánovas, J.L. (1973b) Regulation of the glucolytic enzymes in Pseudomonas putida. Arch Microbiol 93: 53-64.
    • (1973) Arch Microbiol , vol.93 , pp. 53-64
    • Vicente, M.1    Cánovas, J.L.2
  • 77
    • 0014748743 scopus 로고
    • Effect of the thiol-oxidizing agent diamide on the growth of Escherichia coli
    • Wax, R., Rosenberg, E., Kosower, N.S., and Kosower, E.M. (1970) Effect of the thiol-oxidizing agent diamide on the growth of Escherichia coli. J Bacteriol 101: 1092-1093.
    • (1970) J Bacteriol , vol.101 , pp. 1092-1093
    • Wax, R.1    Rosenberg, E.2    Kosower, N.S.3    Kosower, E.M.4
  • 78
    • 37549068090 scopus 로고    scopus 로고
    • +/NADPH in cellular functions and cell death: regulation and biological consequences
    • +/NADPH in cellular functions and cell death: regulation and biological consequences. Antioxid Redox Signal 10: 179-206.
    • (2008) Antioxid Redox Signal , vol.10 , pp. 179-206
    • Ying, W.1


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