-
1
-
-
84901033525
-
Principles and properties of eukaryotic mRNPs
-
1:CAS:528:DC%2BC2cXoslyls7o%3D 24856220
-
Mitchell SF, Parker R. Principles and properties of eukaryotic mRNPs. Mol Cell. 2014;54:547-58.
-
(2014)
Mol Cell
, vol.54
, pp. 547-558
-
-
Mitchell, S.F.1
Parker, R.2
-
2
-
-
84875229872
-
How cells get the message: Dynamic assembly and function of mRNA-protein complexes
-
23478349
-
Müller-McNicoll M, Neugebauer KM. How cells get the message: dynamic assembly and function of mRNA-protein complexes. Nat Rev Genet. 2013;14:275-87.
-
(2013)
Nat Rev Genet
, vol.14
, pp. 275-287
-
-
Müller-McNicoll, M.1
Neugebauer, K.M.2
-
4
-
-
33749054403
-
Splicing regulation in neurologic disease
-
1:CAS:528:DC%2BD28XhtFensbfF 17015229
-
Licatalosi DD, Darnell RB. Splicing regulation in neurologic disease. Neuron. 2006;52:93-101.
-
(2006)
Neuron
, vol.52
, pp. 93-101
-
-
Licatalosi, D.D.1
Darnell, R.B.2
-
5
-
-
84954395859
-
RNA-binding proteins, multifaceted translational regulators in cancer
-
Wurth L, Gebauer F. RNA-binding proteins, multifaceted translational regulators in cancer. Biochim Biophys Acta. 1849;2015:881-6.
-
(1849)
Biochim Biophys Acta
, vol.2015
, pp. 881-886
-
-
Wurth, L.1
Gebauer, F.2
-
6
-
-
84943357016
-
The human RBPome: From genes and proteins to human disease
-
1:CAS:528:DC%2BC2MXos1elu7s%3D 25982388
-
Neelamraju Y, Hashemikhabir S, Janga SC. The human RBPome: From genes and proteins to human disease. J Proteomics. 2015;127(Pt A):61-70.
-
(2015)
J Proteomics
, vol.127
, pp. 61-70
-
-
Neelamraju, Y.1
Hashemikhabir, S.2
Janga, S.C.3
-
7
-
-
84876806808
-
RNA-binding proteins in Mendelian disease
-
1:CAS:528:DC%2BC3sXis1Onu7c%3D 23415593
-
Castello A, Fischer B, Hentze MW, Preiss T. RNA-binding proteins in Mendelian disease. Trends Genet. 2013;29:318-27.
-
(2013)
Trends Genet
, vol.29
, pp. 318-327
-
-
Castello, A.1
Fischer, B.2
Hentze, M.W.3
Preiss, T.4
-
8
-
-
34249316905
-
RNA-binding proteins: Modular design for efficient function
-
1:CAS:528:DC%2BD2sXlsFOhsLs%3D 17473849
-
Lunde BM, Moore C, Varani G. RNA-binding proteins: modular design for efficient function. Nat Rev Mol Cell Biol. 2007;8:479-90.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 479-490
-
-
Lunde, B.M.1
Moore, C.2
Varani, G.3
-
9
-
-
84921461125
-
KH-RNA interactions: Back in the groove
-
1:CAS:528:DC%2BC2MXht1Ogs70%3D 25625331
-
Nicastro G, Taylor IA, Ramos A. KH-RNA interactions: back in the groove. Curr Opin Struct Biol. 2015;30:63-70.
-
(2015)
Curr Opin Struct Biol
, vol.30
, pp. 63-70
-
-
Nicastro, G.1
Taylor, I.A.2
Ramos, A.3
-
10
-
-
84868521191
-
From structure to function of rna binding domains
-
[Internet]. Austin (TX): Landes Bioscience
-
Cléry A, Allain FH-T. From structure to function of rna binding domains. In: Madame Curie Bioscience Database [Internet]. Austin (TX): Landes Bioscience; 2000-2013. http://www.ncbi.nlm.nih.gov/books/NBK63528/.
-
(2000)
Madame Curie Bioscience Database
-
-
Cléry, A.1
Allain, F.H.-T.2
-
11
-
-
84874671928
-
Structural basis for viral 5'-PPP-RNA recognition by human IFIT proteins
-
1:CAS:528:DC%2BC3sXhtFShurg%3D 23334420
-
Abbas YM, Pichlmair A, Górna MW, Superti-Furga G, Nagar B. Structural basis for viral 5'-PPP-RNA recognition by human IFIT proteins. Nature. 2013;494:60-4.
-
(2013)
Nature
, vol.494
, pp. 60-64
-
-
Abbas, Y.M.1
Pichlmair, A.2
Górna, M.W.3
Superti-Furga, G.4
Nagar, B.5
-
12
-
-
84922277120
-
A census of human RNA-binding proteins
-
1:CAS:528:DC%2BC2cXhvVGksLfI 25365966
-
Gerstberger S, Hafner M, Tuschl T. A census of human RNA-binding proteins. Nat Rev Genet. 2014;15:829-45.
-
(2014)
Nat Rev Genet
, vol.15
, pp. 829-845
-
-
Gerstberger, S.1
Hafner, M.2
Tuschl, T.3
-
13
-
-
84949310063
-
The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs
-
Beckmann BM, Horos R, Fischer B, Castello A, Eichelbaum K, Alleaume A-M, et al. The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs. Nat Commun. 2015;6:10127.
-
(2015)
Nat Commun
, vol.6
, pp. 10127
-
-
Beckmann, B.M.1
Horos, R.2
Fischer, B.3
Castello, A.4
Eichelbaum, K.5
Alleaume, A.-M.6
-
14
-
-
0036529621
-
Comparative genomics and evolution of proteins involved in RNA metabolism
-
1:CAS:528:DC%2BD38XjtFOkur8%3D 11917006 101826
-
Anantharaman V, Koonin EV, Aravind L. Comparative genomics and evolution of proteins involved in RNA metabolism. Nucleic Acids Res. 2002;30:1427-64.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 1427-1464
-
-
Anantharaman, V.1
Koonin, E.V.2
Aravind, L.3
-
15
-
-
54949148332
-
Diverse RNA-binding proteins interact with functionally related sets of rnas, suggesting an extensive regulatory system
-
18959479 2573929
-
Hogan DJ, Riordan DP, Gerber AP, Herschlag D, Brown PO. Diverse RNA-binding proteins interact with functionally related sets of rnas, suggesting an extensive regulatory system. PLoS Biol. 2008;6:e255.
-
(2008)
PLoS Biol
, vol.6
, pp. e255
-
-
Hogan, D.J.1
Riordan, D.P.2
Gerber, A.P.3
Herschlag, D.4
Brown, P.O.5
-
16
-
-
50949102412
-
Systemic iron homeostasis and the iron-responsive element/iron-regulatory protein (IRE/IRP) regulatory network
-
1:CAS:528:DC%2BD1cXhtV2isLzN 18489257
-
Muckenthaler MU, Galy B, Hentze MW. Systemic iron homeostasis and the iron-responsive element/iron-regulatory protein (IRE/IRP) regulatory network. Annu Rev Nutr. 2008;28:197-213.
-
(2008)
Annu Rev Nutr
, vol.28
, pp. 197-213
-
-
Muckenthaler, M.U.1
Galy, B.2
Hentze, M.W.3
-
17
-
-
33845865301
-
Structure of dual function iron regulatory protein 1 complexed with ferritin IRE-RNA
-
Walden WE, Selezneva AI, Dupuy J, Volbeda A, Fontecilla Camps JC, Theil EC, et al. Structure of dual function iron regulatory protein 1 complexed with ferritin IRE-RNA. Science. 2006;314:1903-8.
-
(2006)
Science
, vol.314
, pp. 1903-1908
-
-
Walden, W.E.1
Selezneva, A.I.2
Dupuy, J.3
Volbeda, A.4
Fontecilla Camps, J.C.5
Theil, E.C.6
-
18
-
-
25444486174
-
Structure of PTB bound to RNA: Specific binding and implications for splicing regulation
-
Oberstrass FC, Auweter SD, Erat M, Hargous Y, Henning A, Wenter P, Reymond L, Amir-Ahmady B, Pitsch S, Black DL, Allain FH-T. Structure of PTB bound to RNA: specific binding and implications for splicing regulation. Science. 2005;309:2054-7.
-
(2005)
Science
, vol.309
, pp. 2054-2057
-
-
Oberstrass, F.C.1
Auweter, S.D.2
Erat, M.3
Hargous, Y.4
Henning, A.5
Wenter, P.6
Reymond, L.7
Amir-Ahmady, B.8
Pitsch, S.9
Black, D.L.10
Allain, F.H.-T.11
-
19
-
-
0030595187
-
Interaction of U2AF65 RS region with pre-mRNA branch point and promotion of base pairing with U2 snRNA
-
8781232 corrected
-
Valcárcel J, Gaur RK, Singh R, Green MR. Interaction of U2AF65 RS region with pre-mRNA branch point and promotion of base pairing with U2 snRNA [corrected. Science. 1996;273:1706-9.
-
(1996)
Science
, vol.273
, pp. 1706-1709
-
-
Valcárcel, J.1
Gaur, R.K.2
Singh, R.3
Green, M.R.4
-
20
-
-
0026740718
-
Primary structure and binding activity of the hnRNP U protein: Binding RNA through RGG box
-
1:CAS:528:DyaK3sXisV2qtb0%3D 1628625 556741
-
Kiledjian M, Dreyfuss G. Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box. EMBO J. 1992;11:2655-64.
-
(1992)
EMBO J
, vol.11
, pp. 2655-2664
-
-
Kiledjian, M.1
Dreyfuss, G.2
-
21
-
-
33847768609
-
Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions
-
Xie H, Vucetic S, Iakoucheva LM, Oldfield CJ, Dunker AK, Uversky VN, et al. Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions. J Proteome Res. 2007;6:1882-98.
-
(2007)
J Proteome Res
, vol.6
, pp. 1882-1898
-
-
Xie, H.1
Vucetic, S.2
Iakoucheva, L.M.3
Oldfield, C.J.4
Dunker, A.K.5
Uversky, V.N.6
-
23
-
-
77958594113
-
Proteome-wide search reveals unexpected RNA-binding proteins in Saccharomyces cerevisiae
-
20844764 2937035
-
Tsvetanova NG, Klass DM, Salzman J, Brown PO. Proteome-wide search reveals unexpected RNA-binding proteins in Saccharomyces cerevisiae. PLoS One. 2010;5:e12671.
-
(2010)
PLoS One
, vol.5
-
-
Tsvetanova, N.G.1
Klass, D.M.2
Salzman, J.3
Brown, P.O.4
-
24
-
-
78649736872
-
A screen for RNA-binding proteins in yeast indicates dual functions for many enzymes
-
1:CAS:528:DC%2BC3MXhtVSjurc%3D 21124907 2988813
-
Scherrer T, Mittal N, Janga SC, Gerber AP. A screen for RNA-binding proteins in yeast indicates dual functions for many enzymes. PLoS One. 2010;5:e15499.
-
(2010)
PLoS One
, vol.5
-
-
Scherrer, T.1
Mittal, N.2
Janga, S.C.3
Gerber, A.P.4
-
25
-
-
84861969926
-
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins
-
1:CAS:528:DC%2BC38XotVWhtrk%3D 22658674
-
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell. 2012;149:1393-406.
-
(2012)
Cell
, vol.149
, pp. 1393-1406
-
-
Castello, A.1
Fischer, B.2
Eichelbaum, K.3
Horos, R.4
Beckmann, B.M.5
Strein, C.6
Davey, N.E.7
Humphreys, D.T.8
Preiss, T.9
Steinmetz, L.M.10
Krijgsveld, J.11
Hentze, M.W.12
-
26
-
-
84861997955
-
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts
-
Baltz AG, Munschauer M, Schwanhäusser B, Vasile A, Murakawa Y, Schueler M, et al. The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol Cell. 2012;46:674-90.
-
(2012)
Mol Cell
, vol.46
, pp. 674-690
-
-
Baltz, A.G.1
Munschauer, M.2
Schwanhäusser, B.3
Vasile, A.4
Murakawa, Y.5
Schueler, M.6
-
27
-
-
84883741725
-
The RNA-binding protein repertoire of embryonic stem cells
-
1:CAS:528:DC%2BC3sXht1Whs77P 23912277
-
Kwon SC, Yi H, Eichelbaum K, Föhr S, Fischer B, You KT, Castello A, Krijgsveld J, Hentze MW, Kim VN. The RNA-binding protein repertoire of embryonic stem cells. Nat Struct Mol Biol. 2013;20:1122-30.
-
(2013)
Nat Struct Mol Biol
, vol.20
, pp. 1122-1130
-
-
Kwon, S.C.1
Yi, H.2
Eichelbaum, K.3
Föhr, S.4
Fischer, B.5
You, K.T.6
Castello, A.7
Krijgsveld, J.8
Hentze, M.W.9
Kim, V.N.10
-
28
-
-
75349085408
-
The SR protein family
-
Epub 2009 Oct 27. PMID: 19857271
-
Shepard PJ, Hertel KJ. The SR protein family. Genome Biol. 2009;10(10):242. doi: 10.1186/gb-2009-10-10-242. Epub 2009 Oct 27. PMID: 19857271.
-
(2009)
Genome Biol
, vol.10
, Issue.10
, pp. 242
-
-
Shepard, P.J.1
Hertel, K.J.2
-
29
-
-
58249093940
-
The SR protein family of splicing factors: Master regulators of gene expression
-
PMID:19061484
-
Long JC, Caceres JF. The SR protein family of splicing factors: master regulators of gene expression. Biochem J. 2009;417(1):15-27. doi: 10.1042/BJ20081501. PMID:19061484.
-
(2009)
Biochem J
, vol.417
, Issue.1
, pp. 15-27
-
-
Long, J.C.1
Caceres, J.F.2
-
30
-
-
84916640509
-
The RNAissance family: SR proteins as multifaceted regulators of gene expression
-
1:CAS:528:DC%2BC2cXitFSnsLbO 25155147 4268343
-
Howard JM, Sanford JR. The RNAissance family: SR proteins as multifaceted regulators of gene expression. Wiley Interdiscip Rev RNA. 2015;6:93-110.
-
(2015)
Wiley Interdiscip Rev RNA
, vol.6
, pp. 93-110
-
-
Howard, J.M.1
Sanford, J.R.2
-
31
-
-
67649671966
-
SR proteins in vertical integration of gene expression from transcription to RNA processing to translation
-
1:CAS:528:DC%2BD1MXps1ejs7c%3D 19595711 2744344
-
Zhong XY, Wang P, Han J, Rosenfeld MG, Fu XD. SR proteins in vertical integration of gene expression from transcription to RNA processing to translation. Mol Cell. 2009;35:1-10.
-
(2009)
Mol Cell
, vol.35
, pp. 1-10
-
-
Zhong, X.Y.1
Wang, P.2
Han, J.3
Rosenfeld, M.G.4
Fu, X.D.5
-
32
-
-
70350569286
-
Mechanisms of alternative splicing regulation: Insights from molecular and genomics approaches
-
1:CAS:528:DC%2BD1MXhtFGrsL%2FP 19773805 2958924
-
Chen M, Manley JL. Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches. Nat Rev Mol Cell Biol. 2009;10:741-54.
-
(2009)
Nat Rev Mol Cell Biol
, vol.10
, pp. 741-754
-
-
Chen, M.1
Manley, J.L.2
-
33
-
-
14744290800
-
RS domains contact the pre-mRNA throughout spliceosome assembly
-
1:CAS:528:DC%2BD2MXitVejur4%3D 15752982
-
Hertel KJ, Graveley BR. RS domains contact the pre-mRNA throughout spliceosome assembly. Trends Biochem Sci. 2005;30:115-8.
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 115-118
-
-
Hertel, K.J.1
Graveley, B.R.2
-
34
-
-
0032538791
-
A systematic analysis of the factors that determine the strength of pre-mRNA splicing enhancers
-
1:CAS:528:DyaK1cXnvF2jtL0%3D 9822617 1171020
-
Graveley BR, Hertel KJ, Maniatis T. A systematic analysis of the factors that determine the strength of pre-mRNA splicing enhancers. EMBO J. 1998;17:6747-56.
-
(1998)
EMBO J
, vol.17
, pp. 6747-6756
-
-
Graveley, B.R.1
Hertel, K.J.2
Maniatis, T.3
-
35
-
-
31544433157
-
Serine/arginine-rich splicing factors belong to a class of intrinsically disordered proteins
-
1:CAS:528:DC%2BD28Xmsl2mtQ%3D%3D 16407336 1326245
-
Haynes C, Iakoucheva LM. Serine/arginine-rich splicing factors belong to a class of intrinsically disordered proteins. Nucleic Acids Res. 2006;34:305-12.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 305-312
-
-
Haynes, C.1
Iakoucheva, L.M.2
-
36
-
-
84889565658
-
Phosphorylation drives a dynamic switch in serine/arginine-rich proteins
-
1:CAS:528:DC%2BC3sXhslWmsbfO 24183573
-
Xiang S, Gapsys V, Kim H-Y, Bessonov S, Hsiao H-H, Möhlmann S, Klaukien V, Ficner R, Becker S, Urlaub H, Lührmann R, de Groot B, Zweckstetter M. Phosphorylation drives a dynamic switch in serine/arginine-rich proteins. Structure. 2013;21:2162-74.
-
(2013)
Structure
, vol.21
, pp. 2162-2174
-
-
Xiang, S.1
Gapsys, V.2
Kim, H.-Y.3
Bessonov, S.4
Hsiao, H.-H.5
Möhlmann, S.6
Klaukien, V.7
Ficner, R.8
Becker, S.9
Urlaub, H.10
Lührmann, R.11
De Groot, B.12
Zweckstetter, M.13
-
37
-
-
1242316952
-
Arginine-serine-rich domains bound at splicing enhancers contact the branchpoint to promote prespliceosome assembly
-
PMID:14967144
-
Shen H, Kan JLC, Green MR. Arginine-serine-rich domains bound at splicing enhancers contact the branchpoint to promote prespliceosome assembly. Mol Cell. 2004;13(3):367-76. PMID:14967144.
-
(2004)
Mol Cell
, vol.13
, Issue.3
, pp. 367-376
-
-
Shen, H.1
Kan, J.L.C.2
Green, M.R.3
-
38
-
-
8644268780
-
A pathway of sequential arginine-serine-rich domain-splicing signal interactions during mammalian spliceosome assembly
-
1:CAS:528:DC%2BD2cXhtVWhtr7F 15525510
-
Shen H, Green MR. A pathway of sequential arginine-serine-rich domain-splicing signal interactions during mammalian spliceosome assembly. Mol Cell. 2004;16:363-73.
-
(2004)
Mol Cell
, vol.16
, pp. 363-373
-
-
Shen, H.1
Green, M.R.2
-
39
-
-
34447130937
-
RS domain-splicing signal interactions in splicing of U12-type and U2-type introns
-
1:CAS:528:DC%2BD2sXnt1Kgs74%3D 17603499
-
Shen H, Green MR. RS domain-splicing signal interactions in splicing of U12-type and U2-type introns. Nat Struct Mol Biol. 2007;14:597-603.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 597-603
-
-
Shen, H.1
Green, M.R.2
-
40
-
-
84940094447
-
Intra-domain cross-talk regulates serine-arginine protein kinase 1-dependent phosphorylation and splicing function of transformer 2β1
-
1:CAS:528:DC%2BC2MXhtFGns73F 26013829
-
Jamros MA, Aubol BE, Keshwani MM, Zhang Z, Stamm S, Adams JA. Intra-domain cross-talk regulates serine-arginine protein kinase 1-dependent phosphorylation and splicing function of transformer 2β1. J Biol Chem. 2015;290:17269-81.
-
(2015)
J Biol Chem
, vol.290
, pp. 17269-17281
-
-
Jamros, M.A.1
Aubol, B.E.2
Keshwani, M.M.3
Zhang, Z.4
Stamm, S.5
Adams, J.A.6
-
41
-
-
1242339597
-
A protein interaction domain contacts RNA in the prespliceosome
-
1:CAS:528:DC%2BD2cXhs1Cgtro%3D 14967137
-
Graveley BR. A protein interaction domain contacts RNA in the prespliceosome. Mol Cell. 2004;13:302-4.
-
(2004)
Mol Cell
, vol.13
, pp. 302-304
-
-
Graveley, B.R.1
-
42
-
-
0035675137
-
A genome-wide survey of RS domain proteins
-
1:CAS:528:DC%2BD38Xht1ehug%3D%3D 11780626 1370209
-
Boucher L, Ouzounis CA, Enright AJ, Blencowe BJ. A genome-wide survey of RS domain proteins. RNA. 2001;7:1693-701.
-
(2001)
RNA
, vol.7
, pp. 1693-1701
-
-
Boucher, L.1
Ouzounis, C.A.2
Enright, A.J.3
Blencowe, B.J.4
-
43
-
-
84898940142
-
NKAP is a novel RS-related protein that interacts with RNA and RNA binding proteins
-
1:CAS:528:DC%2BC2cXktlertrw%3D 24353314 3950704
-
Burgute BD, Peche VS, Steckelberg A-L, Glöckner G, Gaßen B, Gehring NH, Noegel AA. NKAP is a novel RS-related protein that interacts with RNA and RNA binding proteins. Nucleic Acids Res. 2014;42:3177-93.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 3177-3193
-
-
Burgute, B.D.1
Peche, V.S.2
Steckelberg, A.-L.3
Glöckner, G.4
Gaßen, B.5
Gehring, N.H.6
Noegel, A.A.7
-
44
-
-
0141868917
-
Identification of a nuclear protein that promotes NF-kappaB activation
-
1:CAS:528:DC%2BD3sXnvVylt7o%3D 14550261
-
Chen D, Li Z, Yang Q, Zhang J, Zhai Z, Shu H-B. Identification of a nuclear protein that promotes NF-kappaB activation. Biochem Biophys Res Commun. 2003;310:720-4.
-
(2003)
Biochem Biophys Res Commun
, vol.310
, pp. 720-724
-
-
Chen, D.1
Li, Z.2
Yang, Q.3
Zhang, J.4
Zhai, Z.5
Shu, H.-B.6
-
45
-
-
67349217871
-
NKAP is a transcriptional repressor of notch signaling and is required for T cell development
-
1:CAS:528:DC%2BD1MXosVCksLo%3D 19409814 2777751
-
Pajerowski AG, Nguyen C, Aghajanian H, Shapiro MJ, Shapiro VS. NKAP is a transcriptional repressor of notch signaling and is required for T cell development. Immunity. 2009;30:696-707.
-
(2009)
Immunity
, vol.30
, pp. 696-707
-
-
Pajerowski, A.G.1
Nguyen, C.2
Aghajanian, H.3
Shapiro, M.J.4
Shapiro, V.S.5
-
46
-
-
60049100937
-
Multiple nucleic acid binding sites and intrinsic disorder of severe acute respiratory syndrome coronavirus nucleocapsid protein: Implications for ribonucleocapsid protein packaging
-
1:CAS:528:DC%2BD1MXit1Khurg%3D 19052082 2643731
-
Chang C-K, Hsu Y-L, Chang Y-H, Chao F-A, Wu M-C, Huang Y-S, Hu C-K, Huang T-H. Multiple nucleic acid binding sites and intrinsic disorder of severe acute respiratory syndrome coronavirus nucleocapsid protein: implications for ribonucleocapsid protein packaging. J Virol. 2009;83:2255-64.
-
(2009)
J Virol
, vol.83
, pp. 2255-2264
-
-
Chang, C.-K.1
Hsu, Y.-L.2
Chang, Y.-H.3
Chao, F.-A.4
Wu, M.-C.5
Huang, Y.-S.6
Hu, C.-K.7
Huang, T.-H.8
-
48
-
-
0033801353
-
SAF-Box, a conserved protein domain that specifically recognizes scaffold attachment region DNA
-
1:CAS:528:DC%2BD3cXnt1aitr0%3D 11003645 86301
-
Kipp M, Göhring F, Ostendorp T, van Drunen CM, van Driel R, Przybylski M, Fackelmayer FO. SAF-Box, a conserved protein domain that specifically recognizes scaffold attachment region DNA. Mol Cell Biol. 2000;20:7480-9.
-
(2000)
Mol Cell Biol
, vol.20
, pp. 7480-7489
-
-
Kipp, M.1
Göhring, F.2
Ostendorp, T.3
Van Drunen, C.M.4
Van Driel, R.5
Przybylski, M.6
Fackelmayer, F.O.7
-
49
-
-
0034161452
-
SAP - A putative DNA-binding motif involved in chromosomal organization
-
1:CAS:528:DC%2BD3cXhsFOisrs%3D 10694879
-
Aravind L, Koonin EV. SAP - a putative DNA-binding motif involved in chromosomal organization. Trends Biochem Sci. 2000;25:112-4.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 112-114
-
-
Aravind, L.1
Koonin, E.V.2
-
50
-
-
0026737332
-
Characterization of SAF-A, a novel nuclear DNA binding protein from HeLa cells with high affinity for nuclear matrix/scaffold attachment DNA elements
-
1:CAS:528:DyaK3sXhtF2itL4%3D 1324173 556878
-
Romig H, Fackelmayer FO, Renz A, Ramsperger U, Richter A. Characterization of SAF-A, a novel nuclear DNA binding protein from HeLa cells with high affinity for nuclear matrix/scaffold attachment DNA elements. EMBO J. 1992;11:3431-40.
-
(1992)
EMBO J
, vol.11
, pp. 3431-3440
-
-
Romig, H.1
Fackelmayer, F.O.2
Renz, A.3
Ramsperger, U.4
Richter, A.5
-
51
-
-
84862807502
-
Nuclear matrix factor hnRNP U/SAF-A exerts a global control of alternative splicing by regulating U2 snRNP maturation
-
Xiao R, Tang P, Yang B, Huang J, Zhou Y, Shao C, Li H, Sun H, Zhang Y, Fu X-D. Nuclear matrix factor hnRNP U/SAF-A exerts a global control of alternative splicing by regulating U2 snRNP maturation. Mol Cell. 2012;45:656-68.
-
(2012)
Mol Cell
, vol.45
, pp. 656-668
-
-
Xiao, R.1
Tang, P.2
Yang, B.3
Huang, J.4
Zhou, Y.5
Shao, C.6
Li, H.7
Sun, H.8
Zhang, Y.9
Fu, X.-D.10
-
52
-
-
77956607961
-
The matrix protein hnRNP U is required for chromosomal localization of Xist RNA
-
1:CAS:528:DC%2BC3cXhtFGht7rO 20833368
-
Hasegawa Y, Brockdorff N, Kawano S, Tsutui K, Tsutui K, Nakagawa S. The matrix protein hnRNP U is required for chromosomal localization of Xist RNA. Dev Cell. 2010;19:469-76.
-
(2010)
Dev Cell
, vol.19
, pp. 469-476
-
-
Hasegawa, Y.1
Brockdorff, N.2
Kawano, S.3
Tsutui, K.4
Tsutui, K.5
Nakagawa, S.6
-
53
-
-
84923356612
-
Long noncoding RNA PANDA and scaffold-attachment-factor SAFA control senescence entry and exit
-
25406515 4263151
-
Puvvula PK, Desetty RD, Pineau P, Marchio A, Moon A, Dejean A, Bischof O. Long noncoding RNA PANDA and scaffold-attachment-factor SAFA control senescence entry and exit. Nat Commun. 2014;5:5323.
-
(2014)
Nat Commun
, vol.5
, pp. 5323
-
-
Puvvula, P.K.1
Desetty, R.D.2
Pineau, P.3
Marchio, A.4
Moon, A.5
Dejean, A.6
Bischof, O.7
-
54
-
-
33751094078
-
The solution structure of REF2-I reveals interdomain interactions and regions involved in binding mRNA export factors and RNA
-
1:CAS:528:DC%2BD28XhtFygsL%2FJ 17000901 1624900
-
Golovanov AP, Hautbergue GM, Tintaru AM, Lian L-Y, Wilson SA. The solution structure of REF2-I reveals interdomain interactions and regions involved in binding mRNA export factors and RNA. RNA. 2006;12:1933-48.
-
(2006)
RNA
, vol.12
, pp. 1933-1948
-
-
Golovanov, A.P.1
Hautbergue, G.M.2
Tintaru, A.M.3
Lian, L.-Y.4
Wilson, S.A.5
-
55
-
-
42449134403
-
Mutually exclusive interactions drive handover of mRNA from export adaptors to TAP
-
1:CAS:528:DC%2BD1cXksVCru78%3D 18364396 2278192
-
Hautbergue GM, Hung M-L, Golovanov AP, Lian L-Y, Wilson SA. Mutually exclusive interactions drive handover of mRNA from export adaptors to TAP. Proc Natl Acad Sci U S A. 2008;105:5154-9.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 5154-5159
-
-
Hautbergue, G.M.1
Hung, M.-L.2
Golovanov, A.P.3
Lian, L.-Y.4
Wilson, S.A.5
-
56
-
-
0033119628
-
TAP binds to the constitutive transport element (CTE) through a novel RNA-binding motif that is sufficient to promote CTE-dependent RNA export from the nucleus
-
1:CAS:528:DyaK1MXivVyks7g%3D 10202158 1171280
-
Braun IC, Rohrbach E, Schmitt C, Izaurralde E. TAP binds to the constitutive transport element (CTE) through a novel RNA-binding motif that is sufficient to promote CTE-dependent RNA export from the nucleus. EMBO J. 1999;18:1953-65.
-
(1999)
EMBO J
, vol.18
, pp. 1953-1965
-
-
Braun, I.C.1
Rohrbach, E.2
Schmitt, C.3
Izaurralde, E.4
-
57
-
-
0033625090
-
REF, an evolutionary conserved family of hnRNP-like proteins, interacts with TAP/Mex67p and participates in mRNA nuclear export
-
1:CAS:528:DC%2BD3cXivFyjsLY%3D 10786854 1369944
-
Stutz F, Bachi A, Doerks T, Braun IC, Séraphin B, Wilm M, Bork P, Izaurralde E. REF, an evolutionary conserved family of hnRNP-like proteins, interacts with TAP/Mex67p and participates in mRNA nuclear export. RNA. 2000;6:638-50.
-
(2000)
RNA
, vol.6
, pp. 638-650
-
-
Stutz, F.1
Bachi, A.2
Doerks, T.3
Braun, I.C.4
Séraphin, B.5
Wilm, M.6
Bork, P.7
Izaurralde, E.8
-
58
-
-
84899019877
-
A versatile assay for RNA-binding proteins in living cells
-
1:CAS:528:DC%2BC2cXotVSgsbs%3D 24664470 3988573
-
Strein C, Alleaume A-M, Rothbauer U, Hentze MW, Castello A. A versatile assay for RNA-binding proteins in living cells. RNA. 2014;20:721-31.
-
(2014)
RNA
, vol.20
, pp. 721-731
-
-
Strein, C.1
Alleaume, A.-M.2
Rothbauer, U.3
Hentze, M.W.4
Castello, A.5
-
59
-
-
0034971040
-
The yeast hnRNP-Like proteins Yra1p and Yra2p participate in mRNA export through interaction with Mex67p
-
1:CAS:528:DC%2BD3MXksVOrt78%3D 11390651 87083
-
Zenklusen D, Vinciguerra P, Strahm Y, Stutz F. The yeast hnRNP-Like proteins Yra1p and Yra2p participate in mRNA export through interaction with Mex67p. Mol Cell Biol. 2001;21:4219-32.
-
(2001)
Mol Cell Biol
, vol.21
, pp. 4219-4232
-
-
Zenklusen, D.1
Vinciguerra, P.2
Strahm, Y.3
Stutz, F.4
-
60
-
-
0035970063
-
REF proteins mediate the export of spliced and unspliced mRNAs from the nucleus
-
1:CAS:528:DC%2BD3MXht1SmsLo%3D 11158589 14703
-
Rodrigues JP, Rode M, Gatfield D, Blencowe BJ, Carmo-Fonseca M, Izaurralde E. REF proteins mediate the export of spliced and unspliced mRNAs from the nucleus. Proc Natl Acad Sci U S A. 2001;98:1030-5.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 1030-1035
-
-
Rodrigues, J.P.1
Rode, M.2
Gatfield, D.3
Blencowe, B.J.4
Carmo-Fonseca, M.5
Izaurralde, E.6
-
61
-
-
84930383069
-
Fragile X mental retardation protein: A paradigm for translational control by RNA-binding proteins
-
1:CAS:528:DC%2BC2MXjt1ShsLY%3D 25701550
-
Chen E, Joseph S. Fragile X mental retardation protein: A paradigm for translational control by RNA-binding proteins. Biochimie. 2015;114:147-54.
-
(2015)
Biochimie
, vol.114
, pp. 147-154
-
-
Chen, E.1
Joseph, S.2
-
62
-
-
70349974168
-
The state of synapses in fragile X syndrome
-
1:CAS:528:DC%2BD1MXht1yltrvM 19325170 2762019
-
Pfeiffer BE, Huber KM. The state of synapses in fragile X syndrome. Neuroscientist. 2009;15:549-67.
-
(2009)
Neuroscientist
, vol.15
, pp. 549-567
-
-
Pfeiffer, B.E.1
Huber, K.M.2
-
64
-
-
0025905795
-
Identification of a gene (FMR-1) containing a CGG repeat coincident with a breakpoint cluster region exhibiting length variation in fragile X syndrome
-
1:CAS:528:DyaK38Xht1ahur4%3D 1710175
-
Verkerk AJ, Pieretti M, Sutcliffe JS, Fu YH, Kuhl DP, Pizzuti A, Reiner O, Richards S, Victoria MF, Zhang FP. Identification of a gene (FMR-1) containing a CGG repeat coincident with a breakpoint cluster region exhibiting length variation in fragile X syndrome. Cell. 1991;65:905-14.
-
(1991)
Cell
, vol.65
, pp. 905-914
-
-
Verkerk, A.J.1
Pieretti, M.2
Sutcliffe, J.S.3
Fu, Y.H.4
Kuhl, D.P.5
Pizzuti, A.6
Reiner, O.7
Richards, S.8
Victoria, M.F.9
Zhang, F.P.10
-
65
-
-
0027509234
-
A point mutation in the FMR-1 gene associated with fragile X mental retardation
-
8490650
-
De Boulle K, Verkerk AJ, Reyniers E, Vits L, Hendrickx J, Van Roy B, Van den Bos F, de Graaff E, Oostra BA, Willems PJ. A point mutation in the FMR-1 gene associated with fragile X mental retardation. Nat Genet. 1993;3:31-5.
-
(1993)
Nat Genet
, vol.3
, pp. 31-35
-
-
De Boulle, K.1
Verkerk, A.J.2
Reyniers, E.3
Vits, L.4
Hendrickx, J.5
Van Roy, B.6
Van Den Bos, F.7
De Graaff, E.8
Oostra, B.A.9
Willems, P.J.10
-
66
-
-
84923257346
-
Fragile X mental retardation protein: From autism to neurodegenerative disease
-
25729352 4325920
-
Wang H. Fragile X mental retardation protein: from autism to neurodegenerative disease. Front Cell Neurosci. 2015;9:43.
-
(2015)
Front Cell Neurosci
, vol.9
, pp. 43
-
-
Wang, H.1
-
67
-
-
18044379515
-
Microarray identification of FMRP-associated brain mRNAs and altered mRNA translational profiles in fragile X syndrome
-
1:CAS:528:DC%2BD3MXovVCnsL4%3D 11719188
-
Brown V, Jin P, Ceman S, Darnell JC, O'Donnell WT, Tenenbaum SA, Jin X, Feng Y, Wilkinson KD, Keene JD, Darnell RB, Warren ST. Microarray identification of FMRP-associated brain mRNAs and altered mRNA translational profiles in fragile X syndrome. Cell. 2001;107:477-87.
-
(2001)
Cell
, vol.107
, pp. 477-487
-
-
Brown, V.1
Jin, P.2
Ceman, S.3
Darnell, J.C.4
O'Donnell, W.T.5
Tenenbaum, S.A.6
Jin, X.7
Feng, Y.8
Wilkinson, K.D.9
Keene, J.D.10
Darnell, R.B.11
Warren, S.T.12
-
68
-
-
0035900649
-
Fragile X mental retardation protein targets G quartet mRNAs important for neuronal function
-
1:CAS:528:DC%2BD3MXovVCnsL0%3D 11719189
-
Darnell JC, Jensen KB, Jin P, Brown V, Warren ST, Darnell RB. Fragile X mental retardation protein targets G quartet mRNAs important for neuronal function. Cell. 2001;107:489-99.
-
(2001)
Cell
, vol.107
, pp. 489-499
-
-
Darnell, J.C.1
Jensen, K.B.2
Jin, P.3
Brown, V.4
Warren, S.T.5
Darnell, R.B.6
-
69
-
-
0035801393
-
The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif
-
1:CAS:528:DC%2BD3MXnt1CmtLg%3D 11532944 125594
-
Schaeffer C, Bardoni B, Mandel JL, Ehresmann B, Ehresmann C, Moine H. The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif. EMBO J. 2001;20:4803-13.
-
(2001)
EMBO J
, vol.20
, pp. 4803-4813
-
-
Schaeffer, C.1
Bardoni, B.2
Mandel, J.L.3
Ehresmann, B.4
Ehresmann, C.5
Moine, H.6
-
70
-
-
0141631894
-
G-quartet-dependent recognition between the FMRP RGG box and RNA
-
1:CAS:528:DC%2BD3sXnslGhu70%3D 13130134 1370484
-
Ramos A, Hollingworth D, Pastore A. G-quartet-dependent recognition between the FMRP RGG box and RNA. RNA. 2003;9:1198-207.
-
(2003)
RNA
, vol.9
, pp. 1198-1207
-
-
Ramos, A.1
Hollingworth, D.2
Pastore, A.3
-
71
-
-
33745858693
-
Thermodynamics of the fragile X mental retardation protein RGG box interactions with G quartet forming RNA
-
1:CAS:528:DC%2BD28XlsFGmsL0%3D 16819831
-
Zanotti KJ, Lackey PE, Evans GL, Mihailescu M-R. Thermodynamics of the fragile X mental retardation protein RGG box interactions with G quartet forming RNA. Biochemistry. 2006;45:8319-30.
-
(2006)
Biochemistry
, vol.45
, pp. 8319-8330
-
-
Zanotti, K.J.1
Lackey, P.E.2
Evans, G.L.3
Mihailescu, M.-R.4
-
72
-
-
34548726219
-
Interactions of the G quartet forming semaphorin 3 F RNA with the RGG box domain of the fragile X protein family
-
1:CAS:528:DC%2BD2sXht1ygtb7P 17693432 2018618
-
Menon L, Mihailescu M-R. Interactions of the G quartet forming semaphorin 3 F RNA with the RGG box domain of the fragile X protein family. Nucleic Acids Res. 2007;35:5379-92.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 5379-5392
-
-
Menon, L.1
Mihailescu, M.-R.2
-
73
-
-
47949115691
-
Fragile X mental retardation protein interactions with the microtubule associated protein 1B RNA
-
1:CAS:528:DC%2BD1cXpsVyit7o%3D 18579868 2491469
-
Menon L, Mader SA, Mihailescu M-R. Fragile X mental retardation protein interactions with the microtubule associated protein 1B RNA. RNA. 2008;14:1644-55.
-
(2008)
RNA
, vol.14
, pp. 1644-1655
-
-
Menon, L.1
Mader, S.A.2
Mihailescu, M.-R.3
-
74
-
-
50849092487
-
The G-quartet containing FMRP binding site in FMR1 mRNA is a potent exonic splicing enhancer
-
1:CAS:528:DC%2BD1cXhtVGkt7zE 18653529 2528169
-
Didiot M-C, Tian Z, Schaeffer C, Subramanian M, Mandel J-L, Moine H. The G-quartet containing FMRP binding site in FMR1 mRNA is a potent exonic splicing enhancer. Nucleic Acids Res. 2008;36:4902-12.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4902-4912
-
-
Didiot, M.-C.1
Tian, Z.2
Schaeffer, C.3
Subramanian, M.4
Mandel, J.-L.5
Moine, H.6
-
75
-
-
56349139112
-
Fragile X mental retardation protein recognition of G quadruplex structure per se is sufficient for high affinity binding to RNA
-
1:CAS:528:DC%2BD1cXhtlOhtb%2FO 19396385
-
Bole M, Menon L, Mihailescu M-R. Fragile X mental retardation protein recognition of G quadruplex structure per se is sufficient for high affinity binding to RNA. Mol Biosyst. 2008;4:1212-9.
-
(2008)
Mol Biosyst
, vol.4
, pp. 1212-1219
-
-
Bole, M.1
Menon, L.2
Mihailescu, M.-R.3
-
76
-
-
77952539696
-
Arginines of the RGG box regulate FMRP association with polyribosomes and mRNA
-
1:CAS:528:DC%2BC3cXjs1Gksrk%3D 20064924 2838539
-
Blackwell E, Zhang X, Ceman S. Arginines of the RGG box regulate FMRP association with polyribosomes and mRNA. Hum Mol Genet. 2010;19:1314-23.
-
(2010)
Hum Mol Genet
, vol.19
, pp. 1314-1323
-
-
Blackwell, E.1
Zhang, X.2
Ceman, S.3
-
77
-
-
84923565310
-
FMRP interacts with G-quadruplex structures in the 3'-UTR of its dendritic target Shank1 mRNA
-
25692235 4615183
-
Zhang Y, Gaetano CM, Williams KR, Bassell GJ, Mihailescu M-R. FMRP interacts with G-quadruplex structures in the 3'-UTR of its dendritic target Shank1 mRNA. RNA Biol. 2014;11:1364-74.
-
(2014)
RNA Biol
, vol.11
, pp. 1364-1374
-
-
Zhang, Y.1
Gaetano, C.M.2
Williams, K.R.3
Bassell, G.J.4
Mihailescu, M.-R.5
-
78
-
-
79960052785
-
Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction
-
1:CAS:528:DC%2BC3MXntV2ru7c%3D 21642970 3130835
-
Phan AT, Kuryavyi V, Darnell JC, Serganov A, Majumdar A, Ilin S, Raslin T, Polonskaia A, Chen C, Clain D, Darnell RB, Patel DJ. Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction. Nat Struct Mol Biol. 2011;18:796-804.
-
(2011)
Nat Struct Mol Biol
, vol.18
, pp. 796-804
-
-
Phan, A.T.1
Kuryavyi, V.2
Darnell, J.C.3
Serganov, A.4
Majumdar, A.5
Ilin, S.6
Raslin, T.7
Polonskaia, A.8
Chen, C.9
Clain, D.10
Darnell, R.B.11
Patel, D.J.12
-
79
-
-
79960779323
-
FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism
-
1:CAS:528:DC%2BC3MXptleksbo%3D 21784246 3232425
-
Darnell JC, Van Driesche SJ, Zhang C, Hung KYS, Mele A, Fraser CE, Stone EF, Chen C, Fak JJ, Chi SW, Licatalosi DD, Richter JD, Darnell RB. FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism. Cell. 2011;146:247-61.
-
(2011)
Cell
, vol.146
, pp. 247-261
-
-
Darnell, J.C.1
Van Driesche, S.J.2
Zhang, C.3
Hung, K.Y.S.4
Mele, A.5
Fraser, C.E.6
Stone, E.F.7
Chen, C.8
Fak, J.J.9
Chi, S.W.10
Licatalosi, D.D.11
Richter, J.D.12
Darnell, R.B.13
-
80
-
-
84871413198
-
FMRP targets distinct mRNA sequence elements to regulate protein expression
-
Ascano M, Mukherjee N, Bandaru P, Miller JB, Nusbaum JD, Corcoran DL, et al. FMRP targets distinct mRNA sequence elements to regulate protein expression. Nature. 2012;492:382-6.
-
(2012)
Nature
, vol.492
, pp. 382-386
-
-
Ascano, M.1
Mukherjee, N.2
Bandaru, P.3
Miller, J.B.4
Nusbaum, J.D.5
Corcoran, D.L.6
-
81
-
-
84961288478
-
Relating sequence encoded information to form and function of intrinsically disordered proteins
-
1:CAS:528:DC%2BC2MXlsFemsLk%3D 25863585
-
Das RK, Ruff KM, Pappu RV. Relating sequence encoded information to form and function of intrinsically disordered proteins. Curr Opin Struct Biol. 2015;32:102-12.
-
(2015)
Curr Opin Struct Biol
, vol.32
, pp. 102-112
-
-
Das, R.K.1
Ruff, K.M.2
Pappu, R.V.3
-
82
-
-
28344450939
-
Arginine-rich motifs present multiple interfaces for specific binding by RNA
-
1:CAS:528:DC%2BD2MXhtlWnu7rM 16314457 1370873
-
Bayer TS, Booth LN, Knudsen SM, Ellington AD. Arginine-rich motifs present multiple interfaces for specific binding by RNA. RNA. 2005;11:1848-57.
-
(2005)
RNA
, vol.11
, pp. 1848-1857
-
-
Bayer, T.S.1
Booth, L.N.2
Knudsen, S.M.3
Ellington, A.D.4
-
83
-
-
81755180766
-
The control of HIV transcription: Keeping RNA polymerase II on track
-
1:CAS:528:DC%2BC3MXhsV2msrzM 22100159 3478145
-
Ott M, Geyer M, Zhou Q. The control of HIV transcription: keeping RNA polymerase II on track. Cell Host Microbe. 2011;10:426-35.
-
(2011)
Cell Host Microbe
, vol.10
, pp. 426-435
-
-
Ott, M.1
Geyer, M.2
Zhou, Q.3
-
84
-
-
0028902911
-
Structural studies of HIV-1 Tat protein
-
1:CAS:528:DyaK2MXltVGhu7c%3D 7723010
-
Bayer P, Kraft M, Ejchart A, Westendorp M, Frank R, Rösch P. Structural studies of HIV-1 Tat protein. J Mol Biol. 1995;247:529-35.
-
(1995)
J Mol Biol
, vol.247
, pp. 529-535
-
-
Bayer, P.1
Kraft, M.2
Ejchart, A.3
Westendorp, M.4
Frank, R.5
Rösch, P.6
-
85
-
-
0026035854
-
Analysis of arginine-rich peptides from the HIV Tat protein reveals unusual features of RNA-protein recognition
-
1:CAS:528:DyaK3MXhtFOhsL0%3D 1899841
-
Calnan BJ, Biancalana S, Hudson D, Frankel AD. Analysis of arginine-rich peptides from the HIV Tat protein reveals unusual features of RNA-protein recognition. Genes Dev. 1991;5:201-10.
-
(1991)
Genes Dev
, vol.5
, pp. 201-210
-
-
Calnan, B.J.1
Biancalana, S.2
Hudson, D.3
Frankel, A.D.4
-
86
-
-
0029014899
-
Interaction of human immunodeficiency virus type 1 Tat-derived peptides with TAR RNA
-
1:CAS:528:DyaK2MXmsVehsr4%3D 7612630
-
Long KS, Crothers DM. Interaction of human immunodeficiency virus type 1 Tat-derived peptides with TAR RNA. Biochemistry. 1995;34:8885-95.
-
(1995)
Biochemistry
, vol.34
, pp. 8885-8895
-
-
Long, K.S.1
Crothers, D.M.2
-
87
-
-
0028864394
-
The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein
-
1:CAS:528:DyaK2MXovFGisb0%3D 7563092
-
Aboul-ela F, Karn J, Varani G. The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein. J Mol Biol. 1995;253:313-32.
-
(1995)
J Mol Biol
, vol.253
, pp. 313-332
-
-
Aboul-Ela, F.1
Karn, J.2
Varani, G.3
-
88
-
-
0026350074
-
Arginine-mediated RNA recognition: The arginine fork
-
1:CAS:528:DyaK3MXlslOku7w%3D 1709522
-
Calnan BJ, Tidor B, Biancalana S, Hudson D, Frankel AD. Arginine-mediated RNA recognition: the arginine fork. Science. 1991;252:1167-71.
-
(1991)
Science
, vol.252
, pp. 1167-1171
-
-
Calnan, B.J.1
Tidor, B.2
Biancalana, S.3
Hudson, D.4
Frankel, A.D.5
-
89
-
-
18744375732
-
A single intermolecular contact mediates intramolecular stabilization of both RNA and protein
-
1:CAS:528:DC%2BD2MXksVKgurk%3D 15857951 1100766
-
Calabro V, Daugherty MD, Frankel AD. A single intermolecular contact mediates intramolecular stabilization of both RNA and protein. Proc Natl Acad Sci U S A. 2005;102:6849-54.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 6849-6854
-
-
Calabro, V.1
Daugherty, M.D.2
Frankel, A.D.3
-
90
-
-
0027476547
-
Electrostatic interactions modulate the RNA-binding and transactivation specificities of the human immunodeficiency virus and simian immunodeficiency virus Tat proteins
-
1:CAS:528:DyaK3sXhvVOmtrY%3D 8434019 45916
-
Tao J, Frankel AD. Electrostatic interactions modulate the RNA-binding and transactivation specificities of the human immunodeficiency virus and simian immunodeficiency virus Tat proteins. Proc Natl Acad Sci U S A. 1993;90:1571-5.
-
(1993)
Proc Natl Acad Sci U S A
, vol.90
, pp. 1571-1575
-
-
Tao, J.1
Frankel, A.D.2
-
91
-
-
0028858599
-
Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex
-
1:CAS:528:DyaK2MXpsVyktLc%3D 7502045
-
Puglisi JD, Chen L, Blanchard S, Frankel AD. Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex. Science. 1995;270:1200-3.
-
(1995)
Science
, vol.270
, pp. 1200-1203
-
-
Puglisi, J.D.1
Chen, L.2
Blanchard, S.3
Frankel, A.D.4
-
92
-
-
0033634797
-
An RNA-binding chameleon
-
1:CAS:528:DC%2BD3cXosV2mtrw%3D 11106746
-
Smith CA, Calabro V, Frankel AD. An RNA-binding chameleon. Mol Cell. 2000;6:1067-76.
-
(2000)
Mol Cell
, vol.6
, pp. 1067-1076
-
-
Smith, C.A.1
Calabro, V.2
Frankel, A.D.3
-
93
-
-
0032911885
-
The arginine-rich domains present in human immunodeficiency virus type 1 Tat and Rev function as direct importin beta-dependent nuclear localization signals
-
1:CAS:528:DyaK1MXhtVKhtrg%3D 9891055 116050
-
Truant R, Cullen BR. The arginine-rich domains present in human immunodeficiency virus type 1 Tat and Rev function as direct importin beta-dependent nuclear localization signals. Mol Cell Biol. 1999;19:1210-7.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 1210-1217
-
-
Truant, R.1
Cullen, B.R.2
-
94
-
-
84897959539
-
Life of psi: How full-length HIV-1 RNAs become packaged genomes in the viral particles
-
24530126
-
Kuzembayeva M, Dilley K, Sardo L, Hu W-S. Life of psi: how full-length HIV-1 RNAs become packaged genomes in the viral particles. Virology. 2014;454-455:362-70.
-
(2014)
Virology
, vol.454-455
, pp. 362-370
-
-
Kuzembayeva, M.1
Dilley, K.2
Sardo, L.3
Hu, W.-S.4
-
95
-
-
84934969594
-
HIV Rev assembly on the rev response element (RRE): A structural perspective
-
1:CAS:528:DC%2BC2MXhslOqt77J 26075509 4488727
-
Rausch JW, Le Grice SFJ. HIV Rev assembly on the rev response element (RRE): a structural perspective. Viruses. 2015;7:3053-75.
-
(2015)
Viruses
, vol.7
, pp. 3053-3075
-
-
Rausch, J.W.1
Le Grice, S.F.J.2
-
96
-
-
84883034327
-
The arginine-rich RNA-binding motif of HIV-1 Rev is intrinsically disordered and folds upon RRE binding
-
1:CAS:528:DC%2BC3sXhtlWju7zF 23972852 3752131
-
Casu F, Duggan BM, Hennig M. The arginine-rich RNA-binding motif of HIV-1 Rev is intrinsically disordered and folds upon RRE binding. Biophys J. 2013;105:1004-17.
-
(2013)
Biophys J
, vol.105
, pp. 1004-1017
-
-
Casu, F.1
Duggan, B.M.2
Hennig, M.3
-
97
-
-
0027251792
-
RNA recognition by an isolated alpha helix
-
1:CAS:528:DyaK3sXks1Crs7s%3D 7684657
-
Tan R, Chen L, Buettner JA, Hudson D, Frankel AD. RNA recognition by an isolated alpha helix. Cell. 1993;73:1031-40.
-
(1993)
Cell
, vol.73
, pp. 1031-1040
-
-
Tan, R.1
Chen, L.2
Buettner, J.A.3
Hudson, D.4
Frankel, A.D.5
-
98
-
-
0028596537
-
Costabilization of peptide and RNA structure in an HIV Rev peptide-RRE complex
-
1:CAS:528:DyaK2MXitFGrsb0%3D 7981219
-
Tan R, Frankel AD. Costabilization of peptide and RNA structure in an HIV Rev peptide-RRE complex. Biochemistry. 1994;33:14579-85.
-
(1994)
Biochemistry
, vol.33
, pp. 14579-14585
-
-
Tan, R.1
Frankel, A.D.2
-
99
-
-
0029784592
-
Alpha helix-RNA major groove recognition in an HIV-1 rev peptide-RRE RNA complex
-
1:CAS:528:DyaK28Xls1WqsLg%3D 8703216
-
Battiste JL, Mao H, Rao NS, Tan R, Muhandiram DR, Kay LE, Frankel AD, Williamson JR. Alpha helix-RNA major groove recognition in an HIV-1 rev peptide-RRE RNA complex. Science. 1996;273:1547-51.
-
(1996)
Science
, vol.273
, pp. 1547-1551
-
-
Battiste, J.L.1
Mao, H.2
Rao, N.S.3
Tan, R.4
Muhandiram, D.R.5
Kay, L.E.6
Frankel, A.D.7
Williamson, J.R.8
-
100
-
-
11144259344
-
Retention of conformational flexibility in HIV-1 Rev-RNA complexes
-
1:CAS:528:DC%2BD2cXhtVegtLnM 15610009
-
Wilkinson TA, Zhu L, Hu W, Chen Y. Retention of conformational flexibility in HIV-1 Rev-RNA complexes. Biochemistry. 2004;43:16153-60.
-
(2004)
Biochemistry
, vol.43
, pp. 16153-16160
-
-
Wilkinson, T.A.1
Zhu, L.2
Hu, W.3
Chen, Y.4
-
101
-
-
52049106911
-
A solution to limited genomic capacity: Using adaptable binding surfaces to assemble the functional HIV Rev oligomer on RNA
-
1:CAS:528:DC%2BD1cXht1amsb7K 18922466 2651398
-
Daugherty MD, D'Orso I, Frankel AD. A solution to limited genomic capacity: using adaptable binding surfaces to assemble the functional HIV Rev oligomer on RNA. Mol Cell. 2008;31:824-34.
-
(2008)
Mol Cell
, vol.31
, pp. 824-834
-
-
Daugherty, M.D.1
D'Orso, I.2
Frankel, A.D.3
-
102
-
-
85003292782
-
RNA-directed remodeling of the HIV-1 protein Rev orchestrates assembly of the Rev-Rev response element complex
-
25486594
-
Jayaraman B, Crosby DC, Homer C, Ribeiro I, Mavor D, Frankel AD. RNA-directed remodeling of the HIV-1 protein Rev orchestrates assembly of the Rev-Rev response element complex. Elife. 2014;3:e04120.
-
(2014)
Elife
, vol.3
-
-
Jayaraman, B.1
Crosby, D.C.2
Homer, C.3
Ribeiro, I.4
Mavor, D.5
Frankel, A.D.6
-
103
-
-
84911486811
-
RNA-guided assembly of Rev-RRE nuclear export complexes
-
25163983 4142337
-
Bai Y, Tambe A, Zhou K, Doudna JA. RNA-guided assembly of Rev-RRE nuclear export complexes. Elife. 2014;3:e03656.
-
(2014)
Elife
, vol.3
-
-
Bai, Y.1
Tambe, A.2
Zhou, K.3
Doudna, J.A.4
-
104
-
-
0033200399
-
RNA architecture dictates the conformations of a bound peptide
-
1:CAS:528:DyaK1MXmtFaqtbY%3D 10467126
-
Ye X, Gorin A, Frederick R, Hu W, Majumdar A, Xu W, McLendon G, Ellington A, Patel DJ. RNA architecture dictates the conformations of a bound peptide. Chem Biol. 1999;6:657-69.
-
(1999)
Chem Biol
, vol.6
, pp. 657-669
-
-
Ye, X.1
Gorin, A.2
Frederick, R.3
Hu, W.4
Majumdar, A.5
Xu, W.6
McLendon, G.7
Ellington, A.8
Patel, D.J.9
-
105
-
-
0029868515
-
Selection of RNA-binding peptides in vivo
-
1:CAS:528:DyaK28Xhs1GnsLk%3D 8600395
-
Harada K, Martin SS, Frankel AD. Selection of RNA-binding peptides in vivo. Nature. 1996;380:175-9.
-
(1996)
Nature
, vol.380
, pp. 175-179
-
-
Harada, K.1
Martin, S.S.2
Frankel, A.D.3
-
106
-
-
0032516079
-
A novel glutamine-RNA interaction identified by screening libraries in mammalian cells
-
1:CAS:528:DyaK1cXis1OhtLg%3D 9539722 22474
-
Tan R, Frankel AD. A novel glutamine-RNA interaction identified by screening libraries in mammalian cells. Proc Natl Acad Sci U S A. 1998;95:4247-52.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 4247-4252
-
-
Tan, R.1
Frankel, A.D.2
-
107
-
-
0030726778
-
Molding a peptide into an RNA site by in vivo peptide evolution
-
1:CAS:528:DyaK2sXntFSms74%3D 9342332 23646
-
Harada K, Martin SS, Tan R, Frankel AD. Molding a peptide into an RNA site by in vivo peptide evolution. Proc Natl Acad Sci U S A. 1997;94:11887-92.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 11887-11892
-
-
Harada, K.1
Martin, S.S.2
Tan, R.3
Frankel, A.D.4
-
108
-
-
24044528558
-
Evolvability of the mode of peptide binding by an RNA
-
1:CAS:528:DC%2BD2MXpvVKgsrc%3D 16043495 1370820
-
Iwazaki T, Li X, Harada K. Evolvability of the mode of peptide binding by an RNA. RNA. 2005;11:1364-73.
-
(2005)
RNA
, vol.11
, pp. 1364-1373
-
-
Iwazaki, T.1
Li, X.2
Harada, K.3
-
109
-
-
84860390193
-
PAPD5, a noncanonical poly(A) polymerase with an unusual RNA-binding motif
-
1:CAS:528:DC%2BC3MXhtFSqtLvJ 21788334 3162338
-
Rammelt C, Bilen B, Zavolan M, Keller W. PAPD5, a noncanonical poly(A) polymerase with an unusual RNA-binding motif. RNA. 2011;17:1737-46.
-
(2011)
RNA
, vol.17
, pp. 1737-1746
-
-
Rammelt, C.1
Bilen, B.2
Zavolan, M.3
Keller, W.4
-
110
-
-
75949116417
-
Polyadenylation and degradation of incomplete RNA polymerase I transcripts in mammalian cells
-
1:CAS:528:DC%2BC3cXisFejtg%3D%3D 20062005 2828747
-
Shcherbik N, Wang M, Lapik YR, Srivastava L, Pestov DG. Polyadenylation and degradation of incomplete RNA polymerase I transcripts in mammalian cells. EMBO Rep. 2010;11:106-11.
-
(2010)
EMBO Rep
, vol.11
, pp. 106-111
-
-
Shcherbik, N.1
Wang, M.2
Lapik, Y.R.3
Srivastava, L.4
Pestov, D.G.5
-
111
-
-
82655179905
-
Intrinsically disordered regions as affinity tuners in protein-DNA interactions
-
1:CAS:528:DC%2BC3MXhsFKgsrfE 21918774
-
Vuzman D, Levy Y. Intrinsically disordered regions as affinity tuners in protein-DNA interactions. Mol Biosyst. 2012;8:47-57.
-
(2012)
Mol Biosyst
, vol.8
, pp. 47-57
-
-
Vuzman, D.1
Levy, Y.2
-
112
-
-
0034255123
-
Speeding molecular recognition by using the folding funnel: The fly-casting mechanism
-
1:CAS:528:DC%2BD3cXls12ltLY%3D 10908673 16787
-
Shoemaker BA, Portman JJ, Wolynes PG. Speeding molecular recognition by using the folding funnel: the fly-casting mechanism. Proc Natl Acad Sci U S A. 2000;97:8868-73.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 8868-8873
-
-
Shoemaker, B.A.1
Portman, J.J.2
Wolynes, P.G.3
-
113
-
-
77649266958
-
Capillarity theory for the fly-casting mechanism
-
1:CAS:528:DC%2BC3cXis1ClsLc%3D 20133683 2840330
-
Trizac E, Levy Y, Wolynes PG. Capillarity theory for the fly-casting mechanism. Proc Natl Acad Sci U S A. 2010;107:2746-50.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 2746-2750
-
-
Trizac, E.1
Levy, Y.2
Wolynes, P.G.3
-
114
-
-
0036656143
-
How to get from A to B: Strategies for analysing protein motion on DNA
-
1:CAS:528:DC%2BD38Xlt1emsbk%3D 12122472
-
Halford SE, Szczelkun MD. How to get from A to B: strategies for analysing protein motion on DNA. Eur Biophys J. 2002;31:257-67.
-
(2002)
Eur Biophys J
, vol.31
, pp. 257-267
-
-
Halford, S.E.1
Szczelkun, M.D.2
-
115
-
-
34249932435
-
Probing transcription factor dynamics at the single-molecule level in a living cell
-
1:CAS:528:DC%2BD2sXls1KisbY%3D 17525339 2853898
-
Elf J, Li GW, Xie XS. Probing transcription factor dynamics at the single-molecule level in a living cell. Science. 2007;316:1191-4.
-
(2007)
Science
, vol.316
, pp. 1191-1194
-
-
Elf, J.1
Li, G.W.2
Xie, X.S.3
-
116
-
-
33750078971
-
NMR structural and kinetic characterization of a homeodomain diffusing and hopping on nonspecific DNA
-
1:CAS:528:DC%2BD28XhtFais73O 17008406 1622777
-
Iwahara J, Zweckstetter M, Clore GM. NMR structural and kinetic characterization of a homeodomain diffusing and hopping on nonspecific DNA. Proc Natl Acad Sci U S A. 2006;103:15062-7.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 15062-15067
-
-
Iwahara, J.1
Zweckstetter, M.2
Clore, G.M.3
-
117
-
-
27644460480
-
Measurement of the contributions of 1D and 3D pathways to the translocation of a protein along DNA
-
1:CAS:528:DC%2BD2MXht1Wru7bK 16243975 1262116
-
Gowers DM, Wilson GG, Halford SE. Measurement of the contributions of 1D and 3D pathways to the translocation of a protein along DNA. Proc Natl Acad Sci U S A. 2005;102:15883-8.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 15883-15888
-
-
Gowers, D.M.1
Wilson, G.G.2
Halford, S.E.3
-
118
-
-
78650453629
-
DNA search efficiency is modulated by charge composition and distribution in the intrinsically disordered tail
-
1:CAS:528:DC%2BC3cXhsFyrsbbP 21078959 3000266
-
Vuzman D, Levy Y. DNA search efficiency is modulated by charge composition and distribution in the intrinsically disordered tail. Proc Natl Acad Sci U S A. 2010;107:21004-9.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 21004-21009
-
-
Vuzman, D.1
Levy, Y.2
-
119
-
-
33749014926
-
The extended arms of DNA-binding domains: A tale of tails
-
1:CAS:528:DC%2BD28XhtVagtrrO 16920361
-
Crane-Robinson C, Dragan AI, Privalov PL. The extended arms of DNA-binding domains: a tale of tails. Trends Biochem Sci. 2006;31:547-52.
-
(2006)
Trends Biochem Sci
, vol.31
, pp. 547-552
-
-
Crane-Robinson, C.1
Dragan, A.I.2
Privalov, P.L.3
-
120
-
-
33751436653
-
What drives proteins into the major or minor grooves of DNA?
-
1:CAS:528:DC%2BD28Xht1KnsrvM 17055530 1934558
-
Privalov PL, Dragan AI, Crane-Robinson C, Breslauer KJ, Remeta DP, Minetti CASA. What drives proteins into the major or minor grooves of DNA? J Mol Biol. 2007;365:1-9.
-
(2007)
J Mol Biol
, vol.365
, pp. 1-9
-
-
Privalov, P.L.1
Dragan, A.I.2
Crane-Robinson, C.3
Breslauer, K.J.4
Remeta, D.P.5
Minetti, C.A.S.A.6
-
121
-
-
0030764158
-
The solution structure of an HMG-I(Y)-DNA complex defines a new architectural minor groove binding motif
-
1:CAS:528:DyaK2sXltlWgsb0%3D 9253416
-
Huth JR, Bewley CA, Nissen MS, Evans JN, Reeves R, Gronenborn AM, Clore GM. The solution structure of an HMG-I(Y)-DNA complex defines a new architectural minor groove binding motif. Nat Struct Biol. 1997;4:657-65.
-
(1997)
Nat Struct Biol
, vol.4
, pp. 657-665
-
-
Huth, J.R.1
Bewley, C.A.2
Nissen, M.S.3
Evans, J.N.4
Reeves, R.5
Gronenborn, A.M.6
Clore, G.M.7
-
122
-
-
0032190230
-
AT-hook motifs identified in a wide variety of DNA-binding proteins
-
1:CAS:528:DyaK1cXmslygs7k%3D 9742243 147871
-
Aravind L, Landsman D. AT-hook motifs identified in a wide variety of DNA-binding proteins. Nucleic Acids Res. 1998;26:4413-21.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 4413-4421
-
-
Aravind, L.1
Landsman, D.2
-
123
-
-
34848851109
-
HMGA1a: Sequence-specific RNA-binding factor causing sporadic Alzheimer's disease-linked exon skipping of presenilin-2 pre-mRNA
-
1:CAS:528:DC%2BD2sXht1ersLzL 17903177
-
Manabe T, Ohe K, Katayama T, Matsuzaki S, Yanagita T, Okuda H, Bando Y, Imaizumi K, Reeves R, Tohyama M, Mayeda A. HMGA1a: sequence-specific RNA-binding factor causing sporadic Alzheimer's disease-linked exon skipping of presenilin-2 pre-mRNA. Genes Cells. 2007;12:1179-91.
-
(2007)
Genes Cells
, vol.12
, pp. 1179-1191
-
-
Manabe, T.1
Ohe, K.2
Katayama, T.3
Matsuzaki, S.4
Yanagita, T.5
Okuda, H.6
Bando, Y.7
Imaizumi, K.8
Reeves, R.9
Tohyama, M.10
Mayeda, A.11
-
124
-
-
79953714587
-
7SK small nuclear RNA directly affects HMGA1 function in transcription regulation
-
1:CAS:528:DC%2BC3MXjvFehsLs%3D 21087998 3064786
-
Eilebrecht S, Brysbaert G, Wegert T, Urlaub H, Benecke B-J, Benecke A. 7SK small nuclear RNA directly affects HMGA1 function in transcription regulation. Nucleic Acids Res. 2011;39:2057-72.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 2057-2072
-
-
Eilebrecht, S.1
Brysbaert, G.2
Wegert, T.3
Urlaub, H.4
Benecke, B.-J.5
Benecke, A.6
-
125
-
-
84874959786
-
HMGA1 directly interacts with TAR to modulate basal and Tat-dependent HIV transcription
-
1:CAS:528:DC%2BC2cXjtler 23392246 3672287
-
Eilebrecht S, Wilhelm E, Benecke B-J, Bell B, Benecke AG. HMGA1 directly interacts with TAR to modulate basal and Tat-dependent HIV transcription. RNA Biol. 2013;10:436-44.
-
(2013)
RNA Biol
, vol.10
, pp. 436-444
-
-
Eilebrecht, S.1
Wilhelm, E.2
Benecke, B.-J.3
Bell, B.4
Benecke, A.G.5
-
126
-
-
85016376759
-
RNA-Mediated Regulation of HMGA1 Function
-
1:CAS:528:DC%2BC2MXhtFymur%2FE
-
Benecke AG, Eilebrecht S. RNA-Mediated Regulation of HMGA1 Function. Biogeosciences. 2015;5:943-57.
-
(2015)
Biogeosciences
, vol.5
, pp. 943-957
-
-
Benecke, A.G.1
Eilebrecht, S.2
-
127
-
-
84944448338
-
The extended AT-hook is a novel RNA binding motif
-
26156556 4615771
-
Filarsky M, Zillner K, Araya I, Villar-Garea A, Merkl R, Längst G, Németh A. The extended AT-hook is a novel RNA binding motif. RNA Biol. 2015;12:864-76.
-
(2015)
RNA Biol
, vol.12
, pp. 864-876
-
-
Filarsky, M.1
Zillner, K.2
Araya, I.3
Villar-Garea, A.4
Merkl, R.5
Längst, G.6
Németh, A.7
-
128
-
-
79952723337
-
Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes
-
1:CAS:528:DC%2BC3MXjvFWlt7s%3D 21368180 3060270
-
Brangwynne CP, Mitchison TJ, Hyman AA. Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes. Proc Natl Acad Sci U S A. 2011;108:4334-9.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 4334-4339
-
-
Brangwynne, C.P.1
Mitchison, T.J.2
Hyman, A.A.3
-
129
-
-
79960285739
-
Beyond stereospecificity: Liquids and mesoscale organization of cytoplasm
-
1:CAS:528:DC%2BC3MXptVSrurg%3D 21763600
-
Hyman AA, Brangwynne CP. Beyond stereospecificity: liquids and mesoscale organization of cytoplasm. Dev Cell. 2011;21:14-6.
-
(2011)
Dev Cell
, vol.21
, pp. 14-16
-
-
Hyman, A.A.1
Brangwynne, C.P.2
-
130
-
-
84923878820
-
Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles
-
Nott TJ, Petsalaki E, Farber P, Jervis D, Fussner E, Plochowietz A, Craggs TD, Bazett-Jones DP, Pawson T, Forman-Kay JD, Baldwin AJ. Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles. Mol Cell. 2015;57:936-47.
-
(2015)
Mol Cell
, vol.57
, pp. 936-947
-
-
Nott, T.J.1
Petsalaki, E.2
Farber, P.3
Jervis, D.4
Fussner, E.5
Plochowietz, A.6
Craggs, T.D.7
Bazett-Jones, D.P.8
Pawson, T.9
Forman-Kay, J.D.10
Baldwin, A.J.11
-
131
-
-
84861964894
-
Getting RNA and protein in phase
-
1:CAS:528:DC%2BC38XosVaqtbg%3D 22682242
-
Weber SC, Brangwynne CP. Getting RNA and protein in phase. Cell. 2012;149:1188-91.
-
(2012)
Cell
, vol.149
, pp. 1188-1191
-
-
Weber, S.C.1
Brangwynne, C.P.2
-
132
-
-
84922390086
-
Liquid-liquid phase separation in biology
-
1:CAS:528:DC%2BC2cXitVeit7vL 25288112
-
Hyman AA, Weber CA, Jülicher F. Liquid-liquid phase separation in biology. Annu Rev Cell Dev Biol. 2014;30:39-58.
-
(2014)
Annu Rev Cell Dev Biol
, vol.30
, pp. 39-58
-
-
Hyman, A.A.1
Weber, C.A.2
Jülicher, F.3
-
133
-
-
79551530753
-
Cytoplasmic mRNP granules at a glance
-
1:CAS:528:DC%2BC3MXisFOqurc%3D 21242308 3021993
-
Erickson SL, Lykke-Andersen J. Cytoplasmic mRNP granules at a glance. J Cell Sci. 2011;124:293-7.
-
(2011)
J Cell Sci
, vol.124
, pp. 293-297
-
-
Erickson, S.L.1
Lykke-Andersen, J.2
-
134
-
-
84870596004
-
Drosophila patterning is established by differential association of mRNAs with P bodies
-
1:CAS:528:DC%2BC38Xhslags77I 23178881 4066581
-
Weil TT, Parton RM, Herpers B, Soetaert J, Veenendaal T, Xanthakis D, Dobbie IM, Halstead JM, Hayashi R, Rabouille C, Davis I. Drosophila patterning is established by differential association of mRNAs with P bodies. Nat Cell Biol. 2012;14:1305-13.
-
(2012)
Nat Cell Biol
, vol.14
, pp. 1305-1313
-
-
Weil, T.T.1
Parton, R.M.2
Herpers, B.3
Soetaert, J.4
Veenendaal, T.5
Xanthakis, D.6
Dobbie, I.M.7
Halstead, J.M.8
Hayashi, R.9
Rabouille, C.10
Davis, I.11
-
135
-
-
84955625345
-
ATPase-modulated stress granules contain a diverse proteome and substructure
-
1:CAS:528:DC%2BC28XhtFSjsr0%3D 26777405
-
Jain S, Wheeler JR, Walters RW, Agrawal A, Barsic A, Parker R. ATPase-modulated stress granules contain a diverse proteome and substructure. Cell. 2016;164:487-98.
-
(2016)
Cell
, vol.164
, pp. 487-498
-
-
Jain, S.1
Wheeler, J.R.2
Walters, R.W.3
Agrawal, A.4
Barsic, A.5
Parker, R.6
-
136
-
-
84944884978
-
Formation and maturation of phase-separated liquid droplets by RNA-binding proteins
-
1:CAS:528:DC%2BC2MXhsFKqsbzM 26412307
-
Lin Y, Protter DSW, Rosen MK, Parker R. Formation and maturation of phase-separated liquid droplets by RNA-binding proteins. Mol Cell. 2015;60:208-19.
-
(2015)
Mol Cell
, vol.60
, pp. 208-219
-
-
Lin, Y.1
Protter, D.S.W.2
Rosen, M.K.3
Parker, R.4
-
137
-
-
84920847059
-
MRNP granules. Assembly, function, and connections with disease
-
25531407 4615263
-
Buchan JR. mRNP granules. Assembly, function, and connections with disease. RNA Biol. 2014;11:1019-30.
-
(2014)
RNA Biol
, vol.11
, pp. 1019-1030
-
-
Buchan, J.R.1
-
138
-
-
84882801549
-
Altered ribostasis: RNA-protein granules in degenerative disorders
-
1:CAS:528:DC%2BC3sXht1yhsr%2FE 23953108
-
Ramaswami M, Taylor JP, Parker R. Altered ribostasis: RNA-protein granules in degenerative disorders. Cell. 2013;154:727-36.
-
(2013)
Cell
, vol.154
, pp. 727-736
-
-
Ramaswami, M.1
Taylor, J.P.2
Parker, R.3
-
139
-
-
84860872161
-
Cell-free formation of RNA granules: Low complexity sequence domains form dynamic fibers within hydrogels
-
Kato M, Han TW, Xie S, Shi K, Du X, Wu LC, et al. Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell. 2012;149:753-67.
-
(2012)
Cell
, vol.149
, pp. 753-767
-
-
Kato, M.1
Han, T.W.2
Xie, S.3
Shi, K.4
Du, X.5
Wu, L.C.6
-
140
-
-
84860863700
-
Cell-free formation of RNA granules: Bound RNAs identify features and components of cellular assemblies
-
Han TW, Kato M, Xie S, Wu LC, Mirzaei H, Pei J, et al. Cell-free formation of RNA granules: bound RNAs identify features and components of cellular assemblies. Cell. 2012;149:768-79.
-
(2012)
Cell
, vol.149
, pp. 768-779
-
-
Han, T.W.1
Kato, M.2
Xie, S.3
Wu, L.C.4
Mirzaei, H.5
Pei, J.6
-
141
-
-
84918825645
-
Intrinsically disordered proteins as crucial constituents of cellular aqueous two phase systems and coacervates
-
1:CAS:528:DC%2BC2cXitValtbzO 25436423
-
Uversky VN, Kuznetsova IM, Turoverov KK, Zaslavsky B. Intrinsically disordered proteins as crucial constituents of cellular aqueous two phase systems and coacervates. FEBS Lett. 2015;589:15-22.
-
(2015)
FEBS Lett
, vol.589
, pp. 15-22
-
-
Uversky, V.N.1
Kuznetsova, I.M.2
Turoverov, K.K.3
Zaslavsky, B.4
-
142
-
-
84930960021
-
The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics
-
1:CAS:528:DC%2BC2MXovV2rsLk%3D 26015579 4466716
-
Elbaum-Garfinkle S, Kim Y, Szczepaniak K, Chen CC-H, Eckmann CR, Myong S, Brangwynne CP. The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics. Proc Natl Acad Sci U S A. 2015;112:7189-94.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 7189-7194
-
-
Elbaum-Garfinkle, S.1
Kim, Y.2
Szczepaniak, K.3
Chen, C.C.-H.4
Eckmann, C.R.5
Myong, S.6
Brangwynne, C.P.7
-
143
-
-
84879534460
-
Protein aggregation behavior regulates cyclin transcript localization and cell-cycle control
-
1:CAS:528:DC%2BC3sXpsV2ntrY%3D 23769973 4113091
-
Lee C, Zhang H, Baker AE, Occhipinti P, Borsuk ME, Gladfelter AS. Protein aggregation behavior regulates cyclin transcript localization and cell-cycle control. Dev Cell. 2013;25:572-84.
-
(2013)
Dev Cell
, vol.25
, pp. 572-584
-
-
Lee, C.1
Zhang, H.2
Baker, A.E.3
Occhipinti, P.4
Borsuk, M.E.5
Gladfelter, A.S.6
-
144
-
-
84862151933
-
The tip of the iceberg: RNA-binding proteins with prion-like domains in neurodegenerative disease
-
1:CAS:528:DC%2BC38Xot1ymsr8%3D 22445064 3372647
-
King OD, Gitler AD, Shorter J. The tip of the iceberg: RNA-binding proteins with prion-like domains in neurodegenerative disease. Brain Res. 2012;1462:61-80.
-
(2012)
Brain Res
, vol.1462
, pp. 61-80
-
-
King, O.D.1
Gitler, A.D.2
Shorter, J.3
-
145
-
-
63049091236
-
A systematic survey identifies prions and illuminates sequence features of prionogenic proteins
-
1:CAS:528:DC%2BD1MXls1Srs7w%3D 19345193 2683788
-
Alberti S, Halfmann R, King O, Kapila A, Lindquist S. A systematic survey identifies prions and illuminates sequence features of prionogenic proteins. Cell. 2009;137:146-58.
-
(2009)
Cell
, vol.137
, pp. 146-158
-
-
Alberti, S.1
Halfmann, R.2
King, O.3
Kapila, A.4
Lindquist, S.5
-
146
-
-
50249131374
-
A role for Q/N-rich aggregation-prone regions in P-body localization
-
1:CAS:528:DC%2BD1cXhtVCltb7P 18611963 2680509
-
Reijns MAM, Alexander RD, Spiller MP, Beggs JD. A role for Q/N-rich aggregation-prone regions in P-body localization. J Cell Sci. 2008;121:2463-72.
-
(2008)
J Cell Sci
, vol.121
, pp. 2463-2472
-
-
Reijns, M.A.M.1
Alexander, R.D.2
Spiller, M.P.3
Beggs, J.D.4
-
147
-
-
84940503517
-
Promiscuous interactions and protein disaggregases determine the material state of stress-inducible RNP granules
-
26238190
-
Kroschwald S, Maharana S, Mateju D, Malinovska L, Nüske E, Poser I, Richter D, Alberti S. Promiscuous interactions and protein disaggregases determine the material state of stress-inducible RNP granules. Elife. 2015;4:e06807.
-
(2015)
Elife
, vol.4
-
-
Kroschwald, S.1
Maharana, S.2
Mateju, D.3
Malinovska, L.4
Nüske, E.5
Poser, I.6
Richter, D.7
Alberti, S.8
-
148
-
-
84944884155
-
RNA Controls polyq protein phase transitions
-
Zhang H, Elbaum-Garfinkle S, Langdon EM, Taylor N, Occhipinti P, Bridges AA, et al. RNA Controls polyq protein phase transitions. Mol Cell. 2015;60:220-30.
-
(2015)
Mol Cell
, vol.60
, pp. 220-230
-
-
Zhang, H.1
Elbaum-Garfinkle, S.2
Langdon, E.M.3
Taylor, N.4
Occhipinti, P.5
Bridges, A.A.6
-
149
-
-
72149095755
-
Eukaryotic stress granules: The ins and outs of translation
-
1:CAS:528:DC%2BC3cXhslaqsrs%3D 20064460 2813218
-
Buchan JR, Parker R. Eukaryotic stress granules: the ins and outs of translation. Mol Cell. 2009;36:932-41.
-
(2009)
Mol Cell
, vol.36
, pp. 932-941
-
-
Buchan, J.R.1
Parker, R.2
-
151
-
-
77953295286
-
Arginine methylation of REF/ALY promotes efficient handover of mRNA to TAP/NXF1
-
1:CAS:528:DC%2BC3cXntVCltb4%3D 20129943 2879514
-
Hung M-L, Hautbergue GM, Snijders APL, Dickman MJ, Wilson SA. Arginine methylation of REF/ALY promotes efficient handover of mRNA to TAP/NXF1. Nucleic Acids Res. 2010;38:3351-61.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 3351-3361
-
-
Hung, M.-L.1
Hautbergue, G.M.2
Snijders, A.P.L.3
Dickman, M.J.4
Wilson, S.A.5
-
152
-
-
29644436341
-
Identification and characterization of the methyl arginines in the fragile X mental retardation protein Fmrp
-
1:CAS:528:DC%2BD2MXhtlChsrvO 16319129
-
Stetler A, Winograd C, Sayegh J, Cheever A, Patton E, Zhang X, Clarke S, Ceman S. Identification and characterization of the methyl arginines in the fragile X mental retardation protein Fmrp. Hum Mol Genet. 2006;15:87-96.
-
(2006)
Hum Mol Genet
, vol.15
, pp. 87-96
-
-
Stetler, A.1
Winograd, C.2
Sayegh, J.3
Cheever, A.4
Patton, E.5
Zhang, X.6
Clarke, S.7
Ceman, S.8
-
153
-
-
58149375911
-
Effects of asymmetric arginine dimethylation on RNA-binding peptides
-
1:CAS:528:DC%2BD1cXhsV2ls7bP 18924194
-
Hyun S, Jeong S, Yu J. Effects of asymmetric arginine dimethylation on RNA-binding peptides. Chembiochem. 2008;9:2790-2.
-
(2008)
Chembiochem
, vol.9
, pp. 2790-2792
-
-
Hyun, S.1
Jeong, S.2
Yu, J.3
-
155
-
-
84907221451
-
Poly-dipeptides encoded by the C9orf72 repeats bind nucleoli, impede RNA biogenesis, and kill cells
-
1:CAS:528:DC%2BC2cXhsVGhtbzM 25081482 4459787
-
Kwon I, Xiang S, Kato M, Wu L, Theodoropoulos P, Wang T, Kim J, Yun J, Xie Y, McKnight SL. Poly-dipeptides encoded by the C9orf72 repeats bind nucleoli, impede RNA biogenesis, and kill cells. Science. 2014;345:1139-45.
-
(2014)
Science
, vol.345
, pp. 1139-1145
-
-
Kwon, I.1
Xiang, S.2
Kato, M.3
Wu, L.4
Theodoropoulos, P.5
Wang, T.6
Kim, J.7
Yun, J.8
Xie, Y.9
McKnight, S.L.10
-
156
-
-
84926529027
-
Regulation of RNA granule dynamics by phosphorylation of serine-rich, intrinsically disordered proteins in C. elegans
-
25535836
-
Wang JT, Smith J, Chen B-C, Schmidt H, Rasoloson D, Paix A, Lambrus BG, Calidas D, Betzig E, Seydoux G. Regulation of RNA granule dynamics by phosphorylation of serine-rich, intrinsically disordered proteins in C. elegans. Elife. 2014;3:e04591.
-
(2014)
Elife
, vol.3
-
-
Wang, J.T.1
Smith, J.2
Chen, B.-C.3
Schmidt, H.4
Rasoloson, D.5
Paix, A.6
Lambrus, B.G.7
Calidas, D.8
Betzig, E.9
Seydoux, G.10
-
157
-
-
33744814686
-
Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms
-
1:CAS:528:DC%2BD28XlvFCht78%3D 16717195 1482503
-
Romero PR, Zaidi S, Fang YY, Uversky VN, Radivojac P, Oldfield CJ, Cortese MS, Sickmeier M, LeGall T, Obradovic Z, Dunker AK. Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms. Proc Natl Acad Sci U S A. 2006;103:8390-5.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 8390-8395
-
-
Romero, P.R.1
Zaidi, S.2
Fang, Y.Y.3
Uversky, V.N.4
Radivojac, P.5
Oldfield, C.J.6
Cortese, M.S.7
Sickmeier, M.8
LeGall, T.9
Obradovic, Z.10
Dunker, A.K.11
-
158
-
-
84862992463
-
Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks
-
Buljan M, Chalancon G, Eustermann S, Wagner GP, Fuxreiter M, Bateman A, et al. Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks. Mol Cel. 2012;46:871-83.
-
(2012)
Mol Cel
, vol.46
, pp. 871-883
-
-
Buljan, M.1
Chalancon, G.2
Eustermann, S.3
Wagner, G.P.4
Fuxreiter, M.5
Bateman, A.6
-
159
-
-
84863928687
-
Linear motifs confer functional diversity onto splice variants
-
1:CAS:528:DC%2BC38Xht1Kjs7rF 22638587 3424572
-
Weatheritt RJ, Davey NE, Gibson TJ. Linear motifs confer functional diversity onto splice variants. Nucleic Acids Res. 2012;40:7123-31.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 7123-7131
-
-
Weatheritt, R.J.1
Davey, N.E.2
Gibson, T.J.3
-
160
-
-
0036293284
-
Species-specific and isoform-specific RNA binding of human and mouse fragile X mental retardation proteins
-
1:CAS:528:DC%2BD38Xis1ygu74%3D 11944923
-
Denman RB, Sung YJ. Species-specific and isoform-specific RNA binding of human and mouse fragile X mental retardation proteins. Biochem Biophys Res Commun. 2002;292:1063-9.
-
(2002)
Biochem Biophys Res Commun
, vol.292
, pp. 1063-1069
-
-
Denman, R.B.1
Sung, Y.J.2
-
161
-
-
80054026347
-
A new regulatory function of the region proximal to the RGG box in the fragile X mental retardation protein
-
1:CAS:528:DC%2BC3MXhsVSrurvK 21868366 3172185
-
Blackwell E, Ceman S. A new regulatory function of the region proximal to the RGG box in the fragile X mental retardation protein. J Cell Sci. 2011;124:3060-5.
-
(2011)
J Cell Sci
, vol.124
, pp. 3060-3065
-
-
Blackwell, E.1
Ceman, S.2
-
162
-
-
33748664178
-
Alternative splicing modulates protein arginine methyltransferase-dependent methylation of fragile X syndrome mental retardation protein
-
1:CAS:528:DC%2BD28Xnsl2rsbY%3D 16922515
-
Dolzhanskaya N, Merz G, Denman RB. Alternative splicing modulates protein arginine methyltransferase-dependent methylation of fragile X syndrome mental retardation protein. Biochemistry. 2006;45:10385-93.
-
(2006)
Biochemistry
, vol.45
, pp. 10385-10393
-
-
Dolzhanskaya, N.1
Merz, G.2
Denman, R.B.3
-
163
-
-
0030051618
-
Alternative splicing of exon 14 determines nuclear or cytoplasmic localisation of fmr1 protein isoforms
-
1:CAS:528:DyaK28XltFSiuw%3D%3D 8789445
-
Sittler A, Devys D, Weber C, Mandel JL. Alternative splicing of exon 14 determines nuclear or cytoplasmic localisation of fmr1 protein isoforms. Hum Mol Genet. 1996;5:95-102.
-
(1996)
Hum Mol Genet
, vol.5
, pp. 95-102
-
-
Sittler, A.1
Devys, D.2
Weber, C.3
Mandel, J.L.4
-
164
-
-
84905385616
-
RNA granule assembly and disassembly modulated by nuclear factor associated with double-stranded RNA 2 and nuclear factor 45
-
1:CAS:528:DC%2BC2cXht1SksbzK 24920670 4110319
-
Shiina N, Nakayama K. RNA granule assembly and disassembly modulated by nuclear factor associated with double-stranded RNA 2 and nuclear factor 45. J Biol Chem. 2014;289:21163-80.
-
(2014)
J Biol Chem
, vol.289
, pp. 21163-21180
-
-
Shiina, N.1
Nakayama, K.2
-
165
-
-
0036803243
-
Intrinsically unstructured proteins
-
1:CAS:528:DC%2BD38XnsVWqsbo%3D 12368089
-
Tompa P. Intrinsically unstructured proteins. Trends Biochem Sci. 2002;27:527-33.
-
(2002)
Trends Biochem Sci
, vol.27
, pp. 527-533
-
-
Tompa, P.1
-
166
-
-
84903957093
-
Pathological unfoldomics of uncontrolled chaos: Intrinsically disordered proteins and human diseases
-
Uversky VN, Davé V, Iakoucheva LM, Malaney P, Metallo SJ, Pathak RR, et al. Pathological unfoldomics of uncontrolled chaos: intrinsically disordered proteins and human diseases. Chem Rev. 2014;114:6844-79.
-
(2014)
Chem Rev
, vol.114
, pp. 6844-6879
-
-
Uversky, V.N.1
Davé, V.2
Iakoucheva, L.M.3
Malaney, P.4
Metallo, S.J.5
Pathak, R.R.6
-
167
-
-
84902446852
-
Short linear motifs: Ubiquitous and functionally diverse protein interaction modules directing cell regulation
-
24926813
-
Van Roey K, Uyar B, Weatheritt RJ, Dinkel H, Seiler M, Budd A, Gibson TJ, Davey NE. Short linear motifs: ubiquitous and functionally diverse protein interaction modules directing cell regulation. Chem Rev. 2014;114:6733-78.
-
(2014)
Chem Rev
, vol.114
, pp. 6733-6778
-
-
Van Roey, K.1
Uyar, B.2
Weatheritt, R.J.3
Dinkel, H.4
Seiler, M.5
Budd, A.6
Gibson, T.J.7
Davey, N.E.8
-
168
-
-
84904469894
-
A million peptide motifs for the molecular biologist
-
1:CAS:528:DC%2BC2cXhtF2jsrvE
-
Tompa P, Davey NE, Gibson TJ, Babu MM. A million peptide motifs for the molecular biologist. Mol Cel. 2014;55:161-9.
-
(2014)
Mol Cel
, vol.55
, pp. 161-169
-
-
Tompa, P.1
Davey, N.E.2
Gibson, T.J.3
Babu, M.M.4
-
169
-
-
80053441923
-
Dynamic protein-DNA recognition: Beyond what can be seen
-
1:CAS:528:DC%2BC3MXhtVagsLnI 21620710
-
Fuxreiter M, Simon I, Bondos S. Dynamic protein-DNA recognition: beyond what can be seen. Trends Biochem Sci. 2011;36:415-23.
-
(2011)
Trends Biochem Sci
, vol.36
, pp. 415-423
-
-
Fuxreiter, M.1
Simon, I.2
Bondos, S.3
-
170
-
-
82655175469
-
Roles of intrinsic disorder in protein-nucleic acid interactions
-
1:CAS:528:DC%2BC3MXhsFKgsrbE 21874205 3600845
-
Dyson HJ. Roles of intrinsic disorder in protein-nucleic acid interactions. Mol Biosyst. 2012;8:97-104.
-
(2012)
Mol Biosyst
, vol.8
, pp. 97-104
-
-
Dyson, H.J.1
-
171
-
-
0032749078
-
Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm
-
1:CAS:528:DyaK1MXms12rtbw%3D 10550212
-
Wright PE, Dyson HJ. Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm. J Mol Biol. 1999;293:321-31.
-
(1999)
J Mol Biol
, vol.293
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
172
-
-
14844342815
-
The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins
-
15769473
-
Dosztányi Z, Csizmók V, Tompa P, Simon I. The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins. J Mol Biol. 2005;347:827-39.
-
(2005)
J Mol Biol
, vol.347
, pp. 827-839
-
-
Dosztányi, Z.1
Csizmók, V.2
Tompa, P.3
Simon, I.4
-
173
-
-
19944427655
-
ASF/SF2-regulated CaMKIIdelta alternative splicing temporally reprograms excitation-contraction coupling in cardiac muscle
-
1:CAS:528:DC%2BD2MXot1ChtQ%3D%3D 15652482
-
Xu X, Yang D, Ding J-H, Wang W, Chu P-H, Dalton ND, Wang H-Y, Bermingham JR, Ye Z, Liu F, Rosenfeld MG, Manley JL, Ross J, Chen J, Xiao R-P, Cheng H, Fu X-D. ASF/SF2-regulated CaMKIIdelta alternative splicing temporally reprograms excitation-contraction coupling in cardiac muscle. Cell. 2005;120:59-72.
-
(2005)
Cell
, vol.120
, pp. 59-72
-
-
Xu, X.1
Yang, D.2
Ding, J.-H.3
Wang, W.4
Chu, P.-H.5
Dalton, N.D.6
Wang, H.-Y.7
Bermingham, J.R.8
Ye, Z.9
Liu, F.10
Rosenfeld, M.G.11
Manley, J.L.12
Ross, J.13
Chen, J.14
Xiao, R.-P.15
Cheng, H.16
Fu, X.-D.17
-
174
-
-
0025827463
-
Primary structure of the human splicing factor ASF reveals similarities with Drosophila regulators
-
1:CAS:528:DyaK38Xls1GjsL8%3D 1855257
-
Ge H, Zuo P, Manley JL. Primary structure of the human splicing factor ASF reveals similarities with Drosophila regulators. Cell. 1991;66:373-82.
-
(1991)
Cell
, vol.66
, pp. 373-382
-
-
Ge, H.1
Zuo, P.2
Manley, J.L.3
-
175
-
-
2642616195
-
SAF-B protein couples transcription and pre-mRNA splicing to SAR/MAR elements
-
Nayler O, Strätling W, Bourquin JP, Stagljar I, Lindemann L, Jasper H, et al. SAF-B protein couples transcription and pre-mRNA splicing to SAR/MAR elements. Nucleic Acids Res. 1998;26:3542-9.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 3542-3549
-
-
Nayler, O.1
Strätling, W.2
Bourquin, J.P.3
Stagljar, I.4
Lindemann, L.5
Jasper, H.6
-
176
-
-
79955691547
-
The RNA polymerase II C-terminal domain promotes splicing activation through recruitment of a U2AF65-Prp19 complex
-
1:CAS:528:DC%2BC3MXlvFyqtbY%3D 21536736 3084030
-
David CJ, Boyne AR, Millhouse SR, Manley JL. The RNA polymerase II C-terminal domain promotes splicing activation through recruitment of a U2AF65-Prp19 complex. Genes Dev. 2011;25:972-83.
-
(2011)
Genes Dev
, vol.25
, pp. 972-983
-
-
David, C.J.1
Boyne, A.R.2
Millhouse, S.R.3
Manley, J.L.4
-
177
-
-
31544478849
-
Modular organization of SARS coronavirus nucleocapsid protein
-
1:CAS:528:DC%2BD28XntV2ht7w%3D 16228284
-
Chang C-K, Sue S-C, Yu T-H, Hsieh C-M, Tsai C-K, Chiang Y-C, Lee S-J, Hsiao H-H, Wu W-J, Chang W-L, Lin C-H, Huang T-H. Modular organization of SARS coronavirus nucleocapsid protein. J Biomed Sci. 2006;13:59-72.
-
(2006)
J Biomed Sci
, vol.13
, pp. 59-72
-
-
Chang, C.-K.1
Sue, S.-C.2
Yu, T.-H.3
Hsieh, C.-M.4
Tsai, C.-K.5
Chiang, Y.-C.6
Lee, S.-J.7
Hsiao, H.-H.8
Wu, W.-J.9
Chang, W.-L.10
Lin, C.-H.11
Huang, T.-H.12
-
178
-
-
84895733747
-
Competitive and cooperative interactions mediate RNA transfer from herpesvirus saimiri ORF57 to the mammalian export adaptor ALYREF
-
24550725 3923783
-
Tunnicliffe RB, Hautbergue GM, Wilson SA, Kalra P, Golovanov AP. Competitive and cooperative interactions mediate RNA transfer from herpesvirus saimiri ORF57 to the mammalian export adaptor ALYREF. PLoS Pathog. 2014;10:e1003907.
-
(2014)
PLoS Pathog
, vol.10
-
-
Tunnicliffe, R.B.1
Hautbergue, G.M.2
Wilson, S.A.3
Kalra, P.4
Golovanov, A.P.5
-
179
-
-
84941360204
-
Aven recognition of RNA G-quadruplexes regulates translation of the mixed lineage leukemia protooncogenes
-
PMID:26267306
-
Thandapani P, Song J, Gandin V, Cai Y, Rouleau SG, Garant J-M, Boisvert F-M, Yu Z, Perreault J-P, Topisirovic I, Richard S. Aven recognition of RNA G-quadruplexes regulates translation of the mixed lineage leukemia protooncogenes. Elife. 2015;4. doi: 10.7554/eLife.06234. PMID:26267306.
-
(2015)
Elife
, pp. 4
-
-
Thandapani, P.1
Song, J.2
Gandin, V.3
Cai, Y.4
Rouleau, S.G.5
Garant, J.-M.6
Boisvert, F.-M.7
Yu, Z.8
Perreault, J.-P.9
Topisirovic, I.10
Richard, S.11
-
180
-
-
0042786842
-
Expression of the mouse Aven gene during spermatogenesis, analyzed by subtraction screening using Mvh-knockout mice
-
1:CAS:528:DC%2BD3sXntVGiurc%3D 12971998
-
Ina S, Tsunekawa N, Nakamura A, Noce T. Expression of the mouse Aven gene during spermatogenesis, analyzed by subtraction screening using Mvh-knockout mice. Gene Expr Patterns. 2003;3:635-8.
-
(2003)
Gene Expr Patterns
, vol.3
, pp. 635-638
-
-
Ina, S.1
Tsunekawa, N.2
Nakamura, A.3
Noce, T.4
-
181
-
-
33947210861
-
Distinct structural features of caprin-1 mediate its interaction with G3BP-1 and its induction of phosphorylation of eukaryotic translation initiation factor 2alpha, entry to cytoplasmic stress granules, and selective interaction with a subset of mRNAs
-
1:CAS:528:DC%2BD2sXjsVSrt70%3D 17210633 1820512
-
Solomon S, Xu Y, Wang B, David MD, Schubert P, Kennedy D, Schrader JW. Distinct structural features of caprin-1 mediate its interaction with G3BP-1 and its induction of phosphorylation of eukaryotic translation initiation factor 2alpha, entry to cytoplasmic stress granules, and selective interaction with a subset of mRNAs. Mol Cell Biol. 2007;27:2324-42.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 2324-2342
-
-
Solomon, S.1
Xu, Y.2
Wang, B.3
David, M.D.4
Schubert, P.5
Kennedy, D.6
Schrader, J.W.7
-
182
-
-
18244395316
-
A novel RNA-binding protein in neuronal RNA granules: Regulatory machinery for local translation
-
1:CAS:528:DC%2BD2MXktFKgtLg%3D 15858068
-
Shiina N, Shinkura K, Tokunaga M. A novel RNA-binding protein in neuronal RNA granules: regulatory machinery for local translation. J Neurosci. 2005;25:4420-34.
-
(2005)
J Neurosci
, vol.25
, pp. 4420-4434
-
-
Shiina, N.1
Shinkura, K.2
Tokunaga, M.3
-
183
-
-
79952520900
-
Identification of Ewing's sarcoma protein as a G-quadruplex DNA- and RNA-binding protein
-
1:CAS:528:DC%2BC3MXjslKju74%3D 21244633
-
Takahama K, Kino K, Arai S, Kurokawa R, Oyoshi T. Identification of Ewing's sarcoma protein as a G-quadruplex DNA- and RNA-binding protein. FEBS J. 2011;278:988-98.
-
(2011)
FEBS J
, vol.278
, pp. 988-998
-
-
Takahama, K.1
Kino, K.2
Arai, S.3
Kurokawa, R.4
Oyoshi, T.5
-
184
-
-
77953699543
-
Identification of a self-association domain in the Ewing's sarcoma protein: A novel function for arginine-glycine-glycine rich motifs?
-
1:CAS:528:DC%2BC3cXmslSlsrk%3D 20211855 2912030
-
Shaw DJ, Morse R, Todd AG, Eggleton P, Lorson CL, Young PJ. Identification of a self-association domain in the Ewing's sarcoma protein: a novel function for arginine-glycine-glycine rich motifs? J Biochem. 2010;147:885-93.
-
(2010)
J Biochem
, vol.147
, pp. 885-893
-
-
Shaw, D.J.1
Morse, R.2
Todd, A.G.3
Eggleton, P.4
Lorson, C.L.5
Young, P.J.6
-
185
-
-
0035378344
-
Exposure on cell surface and extensive arginine methylation of ewing sarcoma (EWS) protein
-
1:CAS:528:DC%2BD3MXkt12ktrY%3D 11278906
-
Belyanskaya LL, Gehrig PM, Gehring H. Exposure on cell surface and extensive arginine methylation of ewing sarcoma (EWS) protein. J Biol Chem. 2001;276:18681-7.
-
(2001)
J Biol Chem
, vol.276
, pp. 18681-18687
-
-
Belyanskaya, L.L.1
Gehrig, P.M.2
Gehring, H.3
-
186
-
-
0042063647
-
Expression and subcellular localization of Ewing sarcoma (EWS) protein is affected by the methylation process
-
1:CAS:528:DC%2BD3sXmt1ehu78%3D 12915128
-
Belyanskaya LL, Delattre O, Gehring H. Expression and subcellular localization of Ewing sarcoma (EWS) protein is affected by the methylation process. Exp Cell Res. 2003;288:374-81.
-
(2003)
Exp Cell Res
, vol.288
, pp. 374-381
-
-
Belyanskaya, L.L.1
Delattre, O.2
Gehring, H.3
-
187
-
-
14644437074
-
Transcriptional down-regulation through nuclear exclusion of EWS methylated by PRMT1
-
1:CAS:528:DC%2BD2MXhslCgurc%3D 15737635
-
Araya N, Hiraga H, Kako K, Arao Y, Kato S, Fukamizu A. Transcriptional down-regulation through nuclear exclusion of EWS methylated by PRMT1. Biochem Biophys Res Commun. 2005;329:653-60.
-
(2005)
Biochem Biophys Res Commun
, vol.329
, pp. 653-660
-
-
Araya, N.1
Hiraga, H.2
Kako, K.3
Arao, Y.4
Kato, S.5
Fukamizu, A.6
-
188
-
-
84942856104
-
Crystal structure reveals specific recognition of a G-quadruplex RNA by a β-turn in the RGG motif of FMRP
-
1:CAS:528:DC%2BC2MXhsV2lt73M 26374839 4593078
-
Vasilyev N, Polonskaia A, Darnell JC, Darnell RB, Patel DJ, Serganov A. Crystal structure reveals specific recognition of a G-quadruplex RNA by a β-turn in the RGG motif of FMRP. Proc Natl Acad Sci U S A. 2015;112:E5391-400.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. E5391-E5400
-
-
Vasilyev, N.1
Polonskaia, A.2
Darnell, J.C.3
Darnell, R.B.4
Patel, D.J.5
Serganov, A.6
-
189
-
-
4644366904
-
The C terminus of fragile X mental retardation protein interacts with the multi-domain Ran-binding protein in the microtubule-organising centre
-
1:CAS:528:DC%2BD2cXnslKqtL8%3D 15381419
-
Menon RP, Gibson TJ, Pastore A. The C terminus of fragile X mental retardation protein interacts with the multi-domain Ran-binding protein in the microtubule-organising centre. J Mol Biol. 2004;343:43-53.
-
(2004)
J Mol Biol
, vol.343
, pp. 43-53
-
-
Menon, R.P.1
Gibson, T.J.2
Pastore, A.3
-
190
-
-
84929584026
-
Position-specific binding of FUS to nascent RNA regulates mRNA length
-
1:CAS:528:DC%2BC2MXhtVGhsbvL 25995189 4441052
-
Masuda A, Takeda J-I, Okuno T, Okamoto T, Ohkawara B, Ito M, Ishigaki S, Sobue G, Ohno K. Position-specific binding of FUS to nascent RNA regulates mRNA length. Genes Dev. 2015;29:1045-57.
-
(2015)
Genes Dev
, vol.29
, pp. 1045-1057
-
-
Masuda, A.1
Takeda, J.-I.2
Okuno, T.3
Okamoto, T.4
Ohkawara, B.5
Ito, M.6
Ishigaki, S.7
Sobue, G.8
Ohno, K.9
-
191
-
-
84875421844
-
FUS regulates genes coding for RNA-binding proteins in neurons by binding to their highly conserved introns
-
1:CAS:528:DC%2BC3sXltVyqurw%3D 23389473 3677260
-
Nakaya T, Alexiou P, Maragkakis M, Chang A, Mourelatos Z. FUS regulates genes coding for RNA-binding proteins in neurons by binding to their highly conserved introns. RNA. 2013;19:498-509.
-
(2013)
RNA
, vol.19
, pp. 498-509
-
-
Nakaya, T.1
Alexiou, P.2
Maragkakis, M.3
Chang, A.4
Mourelatos, Z.5
-
192
-
-
84889820285
-
Specific binding of modified RGG domain in TLS/FUS to G-quadruplex RNA: Tyrosines in RGG domain recognize 2'-OH of the riboses of loops in G-quadruplex
-
1:CAS:528:DC%2BC3sXhvVShs7fE 24251952
-
Takahama K, Oyoshi T. Specific binding of modified RGG domain in TLS/FUS to G-quadruplex RNA: tyrosines in RGG domain recognize 2'-OH of the riboses of loops in G-quadruplex. J Am Chem Soc. 2013;135:18016-9.
-
(2013)
J Am Chem Soc
, vol.135
, pp. 18016-18019
-
-
Takahama, K.1
Oyoshi, T.2
-
193
-
-
0038000050
-
Detection of arginine dimethylated peptides by parallel precursor ion scanning mass spectrometry in positive ion mode
-
1:CAS:528:DC%2BD3sXkt1Cltr0%3D 12964758
-
Rappsilber J, Friesen WJ, Paushkin S, Dreyfuss G, Mann M. Detection of arginine dimethylated peptides by parallel precursor ion scanning mass spectrometry in positive ion mode. Anal Chem. 2003;75:3107-14.
-
(2003)
Anal Chem
, vol.75
, pp. 3107-3114
-
-
Rappsilber, J.1
Friesen, W.J.2
Paushkin, S.3
Dreyfuss, G.4
Mann, M.5
-
194
-
-
0029795035
-
The RGG box motif of the herpes simplex virus ICP27 protein mediates an RNA-binding activity and determines in vivo methylation
-
1:CAS:528:DyaK28Xmt1Glsbc%3D 8892862 190811
-
Mears WE, Rice SA. The RGG box motif of the herpes simplex virus ICP27 protein mediates an RNA-binding activity and determines in vivo methylation. J Virol. 1996;70:7445-53.
-
(1996)
J Virol
, vol.70
, pp. 7445-7453
-
-
Mears, W.E.1
Rice, S.A.2
-
195
-
-
66149151820
-
Arginine methylation of the ICP27 RGG box regulates ICP27 export and is required for efficient herpes simplex virus 1 replication
-
1:CAS:528:DC%2BD1MXmtlGlur0%3D 19321610 2681963
-
Souki SK, Gershon PD, Sandri-Goldin RM. Arginine methylation of the ICP27 RGG box regulates ICP27 export and is required for efficient herpes simplex virus 1 replication. J Virol. 2009;83:5309-20.
-
(2009)
J Virol
, vol.83
, pp. 5309-5320
-
-
Souki, S.K.1
Gershon, P.D.2
Sandri-Goldin, R.M.3
-
196
-
-
77953313233
-
Three arginine residues within the RGG box are crucial for ICP27 binding to herpes simplex virus 1 GC-rich sequences and for efficient viral RNA export
-
1:CAS:528:DC%2BC3cXptVehtb4%3D 20410270 2903288
-
Corbin-Lickfett KA, Souki SK, Cocco MJ, Sandri-Goldin RM. Three arginine residues within the RGG box are crucial for ICP27 binding to herpes simplex virus 1 GC-rich sequences and for efficient viral RNA export. J Virol. 2010;84:6367-76.
-
(2010)
J Virol
, vol.84
, pp. 6367-6376
-
-
Corbin-Lickfett, K.A.1
Souki, S.K.2
Cocco, M.J.3
Sandri-Goldin, R.M.4
-
197
-
-
84941132049
-
Luzp4 defines a new mRNA export pathway in cancer cells
-
1:CAS:528:DC%2BC2MXhsFait7rF 25662211 4344508
-
Viphakone N, Cumberbatch MG, Livingstone MJ, Heath PR, Dickman MJ, Catto JW, Wilson SA. Luzp4 defines a new mRNA export pathway in cancer cells. Nucleic Acids Res. 2015;43:2353-66.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. 2353-2366
-
-
Viphakone, N.1
Cumberbatch, M.G.2
Livingstone, M.J.3
Heath, P.R.4
Dickman, M.J.5
Catto, J.W.6
Wilson, S.A.7
-
198
-
-
84866055220
-
TREX exposes the RNA-binding domain of Nxf1 to enable mRNA export
-
22893130 3654228
-
Viphakone N, Hautbergue GM, Walsh M, Chang C-T, Holland A, Folco EG, Reed R, Wilson SA. TREX exposes the RNA-binding domain of Nxf1 to enable mRNA export. Nat Commun. 2012;3:1006.
-
(2012)
Nat Commun
, vol.3
, pp. 1006
-
-
Viphakone, N.1
Hautbergue, G.M.2
Walsh, M.3
Chang, C.-T.4
Holland, A.5
Folco, E.G.6
Reed, R.7
Wilson, S.A.8
-
199
-
-
0026660237
-
The glycine-rich domain of nucleolin has an unusual supersecondary structure responsible for its RNA-helix-destabilizing properties
-
1:CAS:528:DyaK38Xhs1ymt7k%3D 1737751
-
Ghisolfi L, Joseph G, Amalric F, Erard M. The glycine-rich domain of nucleolin has an unusual supersecondary structure responsible for its RNA-helix-destabilizing properties. J Biol Chem. 1992;267:2955-9.
-
(1992)
J Biol Chem
, vol.267
, pp. 2955-2959
-
-
Ghisolfi, L.1
Joseph, G.2
Amalric, F.3
Erard, M.4
-
200
-
-
0032563213
-
Nucleolin interacts with several ribosomal proteins through its RGG domain
-
1:CAS:528:DyaK1cXltFGrt7k%3D 9668083
-
Bouvet P, Diaz JJ, Kindbeiter K, Madjar JJ, Amalric F. Nucleolin interacts with several ribosomal proteins through its RGG domain. J Biol Chem. 1998;273:19025-9.
-
(1998)
J Biol Chem
, vol.273
, pp. 19025-19029
-
-
Bouvet, P.1
Diaz, J.J.2
Kindbeiter, K.3
Madjar, J.J.4
Amalric, F.5
-
201
-
-
77958056523
-
Novel domains in the hnRNP G/RBMX protein with distinct roles in RNA binding and targeting nascent transcripts
-
21327109 3035123
-
Kanhoush R, Beenders B, Perrin C, Moreau J, Bellini M, Penrad-Mobayed M. Novel domains in the hnRNP G/RBMX protein with distinct roles in RNA binding and targeting nascent transcripts. Nucleus. 2010;1:109-22.
-
(2010)
Nucleus
, vol.1
, pp. 109-122
-
-
Kanhoush, R.1
Beenders, B.2
Perrin, C.3
Moreau, J.4
Bellini, M.5
Penrad-Mobayed, M.6
-
202
-
-
46949092929
-
Expression cloning in Xenopus identifies RNA-binding proteins as regulators of embryogenesis and Rbmx as necessary for neural and muscle development
-
1:CAS:528:DC%2BD1cXpsVOgsro%3D 18521943 2562419
-
Dichmann DS, Fletcher RB, Harland RM. Expression cloning in Xenopus identifies RNA-binding proteins as regulators of embryogenesis and Rbmx as necessary for neural and muscle development. Dev Dyn. 2008;237:1755-66.
-
(2008)
Dev Dyn
, vol.237
, pp. 1755-1766
-
-
Dichmann, D.S.1
Fletcher, R.B.2
Harland, R.M.3
-
203
-
-
84857781943
-
A genome-wide homologous recombination screen identifies the RNA-binding protein RBMX as a component of the DNA-damage response
-
1:CAS:528:DC%2BC38XisVKkur4%3D 22344029 3290715
-
Adamson B, Smogorzewska A, Sigoillot FD, King RW, Elledge SJ. A genome-wide homologous recombination screen identifies the RNA-binding protein RBMX as a component of the DNA-damage response. Nat Cell Biol. 2012;14:318-28.
-
(2012)
Nat Cell Biol
, vol.14
, pp. 318-328
-
-
Adamson, B.1
Smogorzewska, A.2
Sigoillot, F.D.3
King, R.W.4
Elledge, S.J.5
-
204
-
-
27444433335
-
RBMX gene is essential for brain development in zebrafish
-
1:CAS:528:DC%2BD2MXht1Cru7%2FJ 15895365
-
Tsend-Ayush E, O'Sullivan LA, Grützner FS, Onnebo SMN, Lewis RS, Delbridge ML, Marshall Graves JA, Ward AC. RBMX gene is essential for brain development in zebrafish. Dev Dyn. 2005;234:682-8.
-
(2005)
Dev Dyn
, vol.234
, pp. 682-688
-
-
Tsend-Ayush, E.1
O'Sullivan, L.A.2
Grützner, F.S.3
Onnebo, S.M.N.4
Lewis, R.S.5
Delbridge, M.L.6
Marshall Graves, J.A.7
Ward, A.C.8
-
205
-
-
84941745221
-
The RBMX gene as a candidate for the Shashi X-linked intellectual disability syndrome
-
1:CAS:528:DC%2BC2MXhsFGitLbF 25256757
-
Shashi V, Xie P, Schoch K, Goldstein DB, Howard TD, Berry MN, Schwartz CE, Cronin K, Sliwa S, Allen A, Need AC. The RBMX gene as a candidate for the Shashi X-linked intellectual disability syndrome. Clin Genet. 2015;88:386-90.
-
(2015)
Clin Genet
, vol.88
, pp. 386-390
-
-
Shashi, V.1
Xie, P.2
Schoch, K.3
Goldstein, D.B.4
Howard, T.D.5
Berry, M.N.6
Schwartz, C.E.7
Cronin, K.8
Sliwa, S.9
Allen, A.10
Need, A.C.11
-
206
-
-
0033030985
-
RBMY evolved on the y chromosome from a ubiquitously transcribed X-Y identical gene
-
1:CAS:528:DyaK1MXkt1eqsLk%3D 10391207
-
Mazeyrat S, Saut N, Mattei MG, Mitchell MJ. RBMY evolved on the Y chromosome from a ubiquitously transcribed X-Y identical gene. Nat Genet. 1999;22:224-6.
-
(1999)
Nat Genet
, vol.22
, pp. 224-226
-
-
Mazeyrat, S.1
Saut, N.2
Mattei, M.G.3
Mitchell, M.J.4
-
207
-
-
0028338650
-
Nuclear localization of foamy virus Gag precursor protein
-
1:CAS:528:DyaK2cXlt1Oqu7k%3D 8035493 236435
-
Schliephake AW, Rethwilm A. Nuclear localization of foamy virus Gag precursor protein. J Virol. 1994;68:4946-54.
-
(1994)
J Virol
, vol.68
, pp. 4946-4954
-
-
Schliephake, A.W.1
Rethwilm, A.2
-
208
-
-
0029864543
-
The carboxyl terminus of the human foamy virus Gag protein contains separable nucleic acid binding and nuclear transport domains
-
1:CAS:528:DyaK28XmvVGnurk%3D 8970944 190912
-
Yu SF, Edelmann K, Strong RK, Moebes A, Rethwilm A, Linial ML. The carboxyl terminus of the human foamy virus Gag protein contains separable nucleic acid binding and nuclear transport domains. J Virol. 1996;70:8255-62.
-
(1996)
J Virol
, vol.70
, pp. 8255-8262
-
-
Yu, S.F.1
Edelmann, K.2
Strong, R.K.3
Moebes, A.4
Rethwilm, A.5
Linial, M.L.6
-
209
-
-
84934906249
-
The cooperative function of arginine residues in the Prototype Foamy Virus Gag C-terminus mediates viral and cellular RNA encapsidation
-
25292281 4198681
-
Hamann MV, Mullers E, Reh J, Stanke N, Effantin G, Weissenhorn W, Lindemann D. The cooperative function of arginine residues in the Prototype Foamy Virus Gag C-terminus mediates viral and cellular RNA encapsidation. Retrovirology. 2014;11:87.
-
(2014)
Retrovirology
, vol.11
, pp. 87
-
-
Hamann, M.V.1
Mullers, E.2
Reh, J.3
Stanke, N.4
Effantin, G.5
Weissenhorn, W.6
Lindemann, D.7
-
210
-
-
78951483245
-
Novel Functions of Prototype Foamy Virus Gag Glycine- Arginine-Rich Boxes in Reverse Transcription and Particle Morphogenesis
-
21106749 3028916
-
Mullers E, Uhlig T, Stirnnagel K, Fiebig U, Zentgraf H, Lindemann D. Novel Functions of Prototype Foamy Virus Gag Glycine- Arginine-Rich Boxes in Reverse Transcription and Particle Morphogenesis. J Virol. 2011;85:1452-63.
-
(2011)
J Virol
, vol.85
, pp. 1452-1463
-
-
Mullers, E.1
Uhlig, T.2
Stirnnagel, K.3
Fiebig, U.4
Zentgraf, H.5
Lindemann, D.6
-
211
-
-
84947704157
-
Novel RNA- and FMRP-binding protein TRF2-S regulates axonal mRNA transport and presynaptic plasticity
-
1:CAS:528:DC%2BC2MXhvFWlsbvM 26586091 4673492
-
Zhang P, Abdelmohsen K, Liu Y, Tominaga-Yamanaka K, Yoon J-H, Ioannis G, Martindale JL, Zhang Y, Becker KG, Yang IH, Gorospe M, Mattson MP. Novel RNA- and FMRP-binding protein TRF2-S regulates axonal mRNA transport and presynaptic plasticity. Nat Commun. 2015;6:8888.
-
(2015)
Nat Commun
, vol.6
, pp. 8888
-
-
Zhang, P.1
Abdelmohsen, K.2
Liu, Y.3
Tominaga-Yamanaka, K.4
Yoon, J.-H.5
Ioannis, G.6
Martindale, J.L.7
Zhang, Y.8
Becker, K.G.9
Yang, I.H.10
Gorospe, M.11
Mattson, M.P.12
-
212
-
-
70249132548
-
Arginine methylation regulates telomere length and stability
-
1:CAS:528:DC%2BD1MXhtFCjs73N 19596784 2738278
-
Mitchell TRH, Glenfield K, Jeyanthan K, Zhu X-D. Arginine methylation regulates telomere length and stability. Mol Cell Biol. 2009;29:4918-34.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 4918-4934
-
-
Mitchell, T.R.H.1
Glenfield, K.2
Jeyanthan, K.3
Zhu, X.-D.4
-
213
-
-
68949198783
-
TERRA RNA binding to TRF2 facilitates heterochromatin formation and ORC recruitment at telomeres
-
1:CAS:528:DC%2BD1MXhsVChsrvM 19716786 2749977
-
Deng Z, Norseen J, Wiedmer A, Riethman H, Lieberman PM. TERRA RNA binding to TRF2 facilitates heterochromatin formation and ORC recruitment at telomeres. Mol Cell. 2009;35:403-13.
-
(2009)
Mol Cell
, vol.35
, pp. 403-413
-
-
Deng, Z.1
Norseen, J.2
Wiedmer, A.3
Riethman, H.4
Lieberman, P.M.5
-
214
-
-
80053628559
-
Nontelomeric splice variant of telomere repeat-binding factor 2 maintains neuronal traits by sequestering repressor element 1-silencing transcription factor
-
1:CAS:528:DC%2BC3MXht1KmtbrO 21903926 3182730
-
Zhang P, Casaday-Potts R, Precht P, Jiang H, Liu Y, Pazin MJ, Mattson MP. Nontelomeric splice variant of telomere repeat-binding factor 2 maintains neuronal traits by sequestering repressor element 1-silencing transcription factor. Proc Natl Acad Sci U S A. 2011;108:16434-9.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 16434-16439
-
-
Zhang, P.1
Casaday-Potts, R.2
Precht, P.3
Jiang, H.4
Liu, Y.5
Pazin, M.J.6
Mattson, M.P.7
-
215
-
-
84880059154
-
The nucleic acid-binding domain and translational repression activity of a Xenopus terminal uridylyl transferase
-
1:CAS:528:DC%2BC3sXhtV2rs7fL 23709223 3711335
-
Lapointe CP, Wickens M. The nucleic acid-binding domain and translational repression activity of a Xenopus terminal uridylyl transferase. J Biol Chem. 2013;288:20723-33.
-
(2013)
J Biol Chem
, vol.288
, pp. 20723-20733
-
-
Lapointe, C.P.1
Wickens, M.2
-
216
-
-
0025168740
-
Fragments of the HIV-1 Tat protein specifically bind TAR RNA
-
1:CAS:528:DyaK3MXjvVSqsg%3D%3D 2205002
-
Weeks KM, Ampe C, Schultz SC, Steitz TA, Crothers DM. Fragments of the HIV-1 Tat protein specifically bind TAR RNA. Science. 1990;249:1281-5.
-
(1990)
Science
, vol.249
, pp. 1281-1285
-
-
Weeks, K.M.1
Ampe, C.2
Schultz, S.C.3
Steitz, T.A.4
Crothers, D.M.5
-
217
-
-
0034034727
-
Fitting peptides into the RNA world
-
1:CAS:528:DC%2BD3cXktlyksLw%3D 10851193
-
Frankel AD. Fitting peptides into the RNA world. Curr Opin Struct Biol. 2000;10:332-40.
-
(2000)
Curr Opin Struct Biol
, vol.10
, pp. 332-340
-
-
Frankel, A.D.1
-
218
-
-
0026651395
-
Conformation of the TAR RNA-arginine complex by NMR spectroscopy
-
1:CAS:528:DyaK38XlsVGks74%3D 1621097
-
Puglisi JD, Tan R, Calnan BJ, Frankel AD, Williamson JR. Conformation of the TAR RNA-arginine complex by NMR spectroscopy. Science. 1992;257:76-80.
-
(1992)
Science
, vol.257
, pp. 76-80
-
-
Puglisi, J.D.1
Tan, R.2
Calnan, B.J.3
Frankel, A.D.4
Williamson, J.R.5
-
219
-
-
84878592472
-
Effect of different arginine methylations on the thermodynamics of Tat peptide binding to HIV-1 TAR RNA
-
1:CAS:528:DC%2BC3sXlvVCmurY%3D 23541506
-
Kumar S, Maiti S. Effect of different arginine methylations on the thermodynamics of Tat peptide binding to HIV-1 TAR RNA. Biochimie. 2013;95:1422-31.
-
(2013)
Biochimie
, vol.95
, pp. 1422-1431
-
-
Kumar, S.1
Maiti, S.2
-
220
-
-
34247158278
-
Arginine methylation of the human immunodeficiency virus type 1 Tat protein by PRMT6 negatively affects Tat Interactions with both cyclin T1 and the Tat transactivation region
-
1:CAS:528:DC%2BD2sXksVKksb8%3D 17267505 1866113
-
Xie B, Invernizzi CF, Richard S, Wainberg MA. Arginine methylation of the human immunodeficiency virus type 1 Tat protein by PRMT6 negatively affects Tat Interactions with both cyclin T1 and the Tat transactivation region. J Virol. 2007;81:4226-34.
-
(2007)
J Virol
, vol.81
, pp. 4226-4234
-
-
Xie, B.1
Invernizzi, C.F.2
Richard, S.3
Wainberg, M.A.4
-
221
-
-
0034715791
-
Acetylation of HIV-1 Tat by CBP/P300 increases transcription of integrated HIV-1 genome and enhances binding to core histones
-
1:CAS:528:DC%2BD3cXotVOhu7k%3D 11080476
-
Deng L, La Fuente De C, Fu P, Wang L, Donnelly R, Wade JD, Lambert P, Li H, Lee CG, Kashanchi F. Acetylation of HIV-1 Tat by CBP/P300 increases transcription of integrated HIV-1 genome and enhances binding to core histones. Virology. 2000;277:278-95.
-
(2000)
Virology
, vol.277
, pp. 278-295
-
-
Deng, L.1
De, L.F.C.2
Fu, P.3
Wang, L.4
Donnelly, R.5
Wade, J.D.6
Lambert, P.7
Li, H.8
Lee, C.G.9
Kashanchi, F.10
-
222
-
-
62549135623
-
Tat acetylation modulates assembly of a viral-host RNA-protein transcription complex
-
19223581 2651313
-
D'Orso I, Frankel AD. Tat acetylation modulates assembly of a viral-host RNA-protein transcription complex. Proc Natl Acad Sci U S A. 2009;106:3101-6.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 3101-3106
-
-
D'Orso, I.1
Frankel, A.D.2
-
223
-
-
0042671259
-
Acetylation of Tat defines a cyclinT1-independent step in HIV transactivation
-
Kaehlcke K, Dorr A, Hetzer Egger C, Kiermer V, Henklein P, Schnoelzer M, Loret E, Cole PA, Verdin E, Ott M. Acetylation of Tat defines a cyclinT1-independent step in HIV transactivation. Mol Cel. 2003;12:167-76.
-
(2003)
Mol Cel
, vol.12
, pp. 167-176
-
-
Kaehlcke, K.1
Dorr, A.2
Hetzer Egger, C.3
Kiermer, V.4
Henklein, P.5
Schnoelzer, M.6
Loret, E.7
Cole, P.A.8
Verdin, E.9
Ott, M.10
-
224
-
-
84934907602
-
The HIV-1 Rev response element (RRE) adopts alternative conformations that promote different rates of virus replication
-
1:CAS:528:DC%2BC2MXhsFaisbzK 25855816 4482075
-
Sherpa C, Rausch JW, Le Grice SFJ, Hammarskjold M-L, Rekosh D. The HIV-1 Rev response element (RRE) adopts alternative conformations that promote different rates of virus replication. Nucleic Acids Res. 2015;43:4676-86.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. 4676-4686
-
-
Sherpa, C.1
Rausch, J.W.2
Le Grice, S.F.J.3
Hammarskjold, M.-L.4
Rekosh, D.5
-
225
-
-
0029811379
-
A plant viral coat protein RNA binding consensus sequence contains a crucial arginine
-
1:CAS:528:DyaK28Xmt1ems7c%3D 8890181 452247
-
Ansel-McKinney P, Scott SW, Swanson M, Ge X, Gehrke L. A plant viral coat protein RNA binding consensus sequence contains a crucial arginine. EMBO J. 1996;15:5077-84.
-
(1996)
EMBO J
, vol.15
, pp. 5077-5084
-
-
Ansel-McKinney, P.1
Scott, S.W.2
Swanson, M.3
Ge, X.4
Gehrke, L.5
-
226
-
-
0020360806
-
Proton-magnetic-resonance studies on the coat protein of alfalfa mosaic virus
-
1:CAS:528:DyaL38XkvVOgtL4%3D 6290214
-
Kan JH, Andree PJ, Kouijzer LC, Mellema JE. Proton-magnetic-resonance studies on the coat protein of alfalfa mosaic virus. Eur J Biochem. 1982;126:29-33.
-
(1982)
Eur J Biochem
, vol.126
, pp. 29-33
-
-
Kan, J.H.1
Andree, P.J.2
Kouijzer, L.C.3
Mellema, J.E.4
-
227
-
-
84931287861
-
A novel RNA binding surface of the TAM domain of TIP5/BAZ2A mediates epigenetic regulation of rRNA genes
-
1:CAS:528:DC%2BC2MXhsFaitrbE 25916849 4446428
-
Anosova I, Melnik S, Tripsianes K, Kateb F, Grummt I, Sattler M. A novel RNA binding surface of the TAM domain of TIP5/BAZ2A mediates epigenetic regulation of rRNA genes. Nucleic Acids Res. 2015;43:5208-20.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. 5208-5220
-
-
Anosova, I.1
Melnik, S.2
Tripsianes, K.3
Kateb, F.4
Grummt, I.5
Sattler, M.6
-
228
-
-
84924705911
-
BAZ2A (TIP5) is involved in epigenetic alterations in prostate cancer and its overexpression predicts disease recurrence
-
25485837
-
Gu L, Frommel SC, Oakes CC, Simon R, Grupp K, Gerig CY, Bär D, Robinson MD, Baer C, Weiss M, Gu Z, Schapira M, Kuner R, Sültmann H, Provenzano M, Yaspo M-L, Brors B, Korbel J, Schlomm T, Sauter G, Eils R, Plass C, Santoro R. BAZ2A (TIP5) is involved in epigenetic alterations in prostate cancer and its overexpression predicts disease recurrence. Nat Genet. 2014;47:22-30.
-
(2014)
Nat Genet
, vol.47
, pp. 22-30
-
-
Gu, L.1
Frommel, S.C.2
Oakes, C.C.3
Simon, R.4
Grupp, K.5
Gerig, C.Y.6
Bär, D.7
Robinson, M.D.8
Baer, C.9
Weiss, M.10
Gu, Z.11
Schapira, M.12
Kuner, R.13
Sültmann, H.14
Provenzano, M.15
Yaspo, M.-L.16
Brors, B.17
Korbel, J.18
Schlomm, T.19
Sauter, G.20
Eils, R.21
Plass, C.22
Santoro, R.23
more..
-
229
-
-
84940511517
-
Disease-associated mutation in SRSF2 misregulates splicing by altering RNA-binding affinities
-
Zhang J, Lieu YK, Ali AM, Penson A, Reggio KS, Rabadan R, et al. Disease-associated mutation in SRSF2 misregulates splicing by altering RNA-binding affinities. Proc Natl Acad Sci U S A. 2015;112:E4726-34.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. E4726-E4734
-
-
Zhang, J.1
Lieu, Y.K.2
Ali, A.M.3
Penson, A.4
Reggio, K.S.5
Rabadan, R.6
-
230
-
-
84855343723
-
A syn-anti conformational difference allows SRSF2 to recognize guanines and cytosines equally well
-
1:CAS:528:DC%2BC3MXhtlWlurfP 22002536 3252578
-
Daubner GM, Cléry A, Jayne S, Stevenin J, Allain FH-T. A syn-anti conformational difference allows SRSF2 to recognize guanines and cytosines equally well. EMBO J. 2012;31:162-74.
-
(2012)
EMBO J
, vol.31
, pp. 162-174
-
-
Daubner, G.M.1
Cléry, A.2
Jayne, S.3
Stevenin, J.4
Allain, F.H.-T.5
-
231
-
-
79952324952
-
Structural basis for the dual RNA-recognition modes of human Tra2-β RRM
-
1:CAS:528:DC%2BC3MXis1CitLk%3D 20926394 3045587
-
Tsuda K, Someya T, Kuwasako K, Takahashi M, He F, Unzai S, Inoue M, Harada T, Watanabe S, Terada T, Kobayashi N, Shirouzu M, Kigawa T, Tanaka A, Sugano S, Güntert P, Yokoyama S, Muto Y. Structural basis for the dual RNA-recognition modes of human Tra2-β RRM. Nucleic Acids Res. 2011;39:1538-53.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 1538-1553
-
-
Tsuda, K.1
Someya, T.2
Kuwasako, K.3
Takahashi, M.4
He, F.5
Unzai, S.6
Inoue, M.7
Harada, T.8
Watanabe, S.9
Terada, T.10
Kobayashi, N.11
Shirouzu, M.12
Kigawa, T.13
Tanaka, A.14
Sugano, S.15
Güntert, P.16
Yokoyama, S.17
Muto, Y.18
-
232
-
-
79953805056
-
Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-β1
-
21399644
-
Cléry A, Jayne S, Benderska N, Dominguez C, Stamm S, Allain FH-T. Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-β1. Nat Struct Mol Biol. 2011;18:443-50.
-
(2011)
Nat Struct Mol Biol
, vol.18
, pp. 443-450
-
-
Cléry, A.1
Jayne, S.2
Benderska, N.3
Dominguez, C.4
Stamm, S.5
Allain, F.H.-T.6
-
233
-
-
0031010564
-
Molecular cloning of htra2-beta-1 and htra2-beta-2, two human homologs of tra-2 generated by alternative splicing
-
1:CAS:528:DyaK2sXktlSju7Y%3D 9212162
-
Beil B, Screaton G, Stamm S. Molecular cloning of htra2-beta-1 and htra2-beta-2, two human homologs of tra-2 generated by alternative splicing. DNA Cell Biol. 1997;16:679-90.
-
(1997)
DNA Cell Biol
, vol.16
, pp. 679-690
-
-
Beil, B.1
Screaton, G.2
Stamm, S.3
-
234
-
-
84944907005
-
Phase separation by low complexity domains promotes stress granule assembly and drives pathological fibrillization
-
1:CAS:528:DC%2BC2MXhsFKqtrrF 26406374
-
Molliex A, Temirov J, Lee J, Coughlin M, Kanagaraj AP, Kim HJ, Mittag T, Taylor JP. Phase separation by low complexity domains promotes stress granule assembly and drives pathological fibrillization. Cell. 2015;163:123-33.
-
(2015)
Cell
, vol.163
, pp. 123-133
-
-
Molliex, A.1
Temirov, J.2
Lee, J.3
Coughlin, M.4
Kanagaraj, A.P.5
Kim, H.J.6
Mittag, T.7
Taylor, J.P.8
-
235
-
-
0025756410
-
Interactions of the A1 heterogeneous nuclear ribonucleoprotein and its proteolytic derivative, UP1, with RNA and DNA: Evidence for multiple RNA binding domains and salt-dependent binding mode transitions
-
1:CAS:528:DyaK3MXhtlygur8%3D 1848781
-
Nadler SG, Merrill BM, Roberts WJ, Keating KM, Lisbin MJ, Barnett SF, Wilson SH, Williams KR. Interactions of the A1 heterogeneous nuclear ribonucleoprotein and its proteolytic derivative, UP1, with RNA and DNA: evidence for multiple RNA binding domains and salt-dependent binding mode transitions. Biochemistry. 1991;30:2968-76.
-
(1991)
Biochemistry
, vol.30
, pp. 2968-2976
-
-
Nadler, S.G.1
Merrill, B.M.2
Roberts, W.J.3
Keating, K.M.4
Lisbin, M.J.5
Barnett, S.F.6
Wilson, S.H.7
Williams, K.R.8
-
236
-
-
0028061367
-
Function of conserved domains of hnRNP A1 and other hnRNP A/B proteins
-
1:CAS:528:DyaK2MXktFWjsbo%3D 7957114 395506
-
Mayeda A, Munroe SH, Cáceres JF, Krainer AR. Function of conserved domains of hnRNP A1 and other hnRNP A/B proteins. EMBO J. 1994;13:5483-95.
-
(1994)
EMBO J
, vol.13
, pp. 5483-5495
-
-
Mayeda, A.1
Munroe, S.H.2
Cáceres, J.F.3
Krainer, A.R.4
-
237
-
-
0028963968
-
Nucleo-cytoplasmic distribution of human hnRNP proteins: A search for the targeting domains in hnRNP A1
-
1:CAS:528:DyaK2MXktFSjs70%3D 7769000
-
Weighardt F, Biamonti G, Riva S. Nucleo-cytoplasmic distribution of human hnRNP proteins: a search for the targeting domains in hnRNP A1. J Cell Sci. 1995;108(Pt 2):545-55.
-
(1995)
J Cell Sci
, vol.108
, pp. 545-555
-
-
Weighardt, F.1
Biamonti, G.2
Riva, S.3
-
238
-
-
84904578236
-
APC Is an RNA-binding protein, and its interactome provides a link to neural development and microtubule assembly
-
1:CAS:528:DC%2BC2cXhtFyjtLfK 25036633 4133101
-
Preitner N, Quan J, Nowakowski DW, Hancock ML, Shi J, Tcherkezian J, Young-Pearse TL, Flanagan JG. APC Is an RNA-binding protein, and its interactome provides a link to neural development and microtubule assembly. Cell. 2014;158:368-82.
-
(2014)
Cell
, vol.158
, pp. 368-382
-
-
Preitner, N.1
Quan, J.2
Nowakowski, D.W.3
Hancock, M.L.4
Shi, J.5
Tcherkezian, J.6
Young-Pearse, T.L.7
Flanagan, J.G.8
-
239
-
-
84898854590
-
CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53
-
24696455 4015496
-
Saldaña-Meyer R, González-Buendía E, Guerrero G, Narendra V, Bonasio R, Recillas-Targa F, Reinberg D. CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53. Genes Dev. 2014;28:723-34.
-
(2014)
Genes Dev
, vol.28
, pp. 723-734
-
-
Saldaña-Meyer, R.1
González-Buendía, E.2
Guerrero, G.3
Narendra, V.4
Bonasio, R.5
Recillas-Targa, F.6
Reinberg, D.7
-
240
-
-
49849101215
-
Intrinsic structural disorder of DF31, a drosophilaprotein of chromatin decondensation and remodeling activities
-
18484763
-
Szollosi E, Bokor M, Bodor A, Perczel A, Klement E, Medzihradszky KF, Tompa K, Tompa P. Intrinsic structural disorder of DF31, a drosophilaprotein of chromatin decondensation and remodeling activities. J Proteome Res. 2008;7:2291-9.
-
(2008)
J Proteome Res
, vol.7
, pp. 2291-2299
-
-
Szollosi, E.1
Bokor, M.2
Bodor, A.3
Perczel, A.4
Klement, E.5
Medzihradszky, K.F.6
Tompa, K.7
Tompa, P.8
-
241
-
-
78649807567
-
Phosphorylation of the PRC2 component Ezh2 is cell cycle-regulated and up-regulates its binding to ncRNA
-
1:CAS:528:DC%2BC3cXhsF2jsL3P 21123648 2994035
-
Kaneko S, Li G, Son J, Xu CF, Margueron R, Neubert TA, Reinberg D. Phosphorylation of the PRC2 component Ezh2 is cell cycle-regulated and up-regulates its binding to ncRNA. Genes Dev. 2010;24:2615-20.
-
(2010)
Genes Dev
, vol.24
, pp. 2615-2620
-
-
Kaneko, S.1
Li, G.2
Son, J.3
Xu, C.F.4
Margueron, R.5
Neubert, T.A.6
Reinberg, D.7
-
242
-
-
82755176823
-
Corepressor protein CDYL functions as a molecular bridge between polycomb repressor complex 2 and repressive chromatin mark trimethylated histone lysine 27
-
1:CAS:528:DC%2BC3MXhsFKjsrjP 22009739 3234934
-
Zhang Y, Yang X, Gui B, Xie G, Zhang D, Shang Y, Liang J. Corepressor protein CDYL functions as a molecular bridge between polycomb repressor complex 2 and repressive chromatin mark trimethylated histone lysine 27. J Biol Chem. 2011;286:42414-25.
-
(2011)
J Biol Chem
, vol.286
, pp. 42414-42425
-
-
Zhang, Y.1
Yang, X.2
Gui, B.3
Xie, G.4
Zhang, D.5
Shang, Y.6
Liang, J.7
-
243
-
-
55349109963
-
Polycomb proteins targeted by a short repeat rna to the mouse X chromosome
-
1:CAS:528:DC%2BD1cXht12ltb7M 18974356 2748911
-
Zhao J, Sun BK, Erwin JA, Song JJ, Lee JT. Polycomb proteins targeted by a short repeat rna to the mouse X chromosome. Science. 2008;322:750-6.
-
(2008)
Science
, vol.322
, pp. 750-756
-
-
Zhao, J.1
Sun, B.K.2
Erwin, J.A.3
Song, J.J.4
Lee, J.T.5
-
244
-
-
84916917551
-
Novel RNA-binding protein P311 binds eukaryotic translation initiation factor 3 subunit b (eIF3b) to promote translation of transforming growth factor β1-3 (TGF-β1-3)
-
1:CAS:528:DC%2BC2cXitVClurfM 25336651 4256334
-
Yue MM, Lv K, Meredith SC, Martindale JL, Gorospe M, Schuger L. Novel RNA-binding protein P311 binds eukaryotic translation initiation factor 3 subunit b (eIF3b) to promote translation of transforming growth factor β1-3 (TGF-β1-3). J Biol Chem. 2014;289:33971-83.
-
(2014)
J Biol Chem
, vol.289
, pp. 33971-33983
-
-
Yue, M.M.1
Lv, K.2
Meredith, S.C.3
Martindale, J.L.4
Gorospe, M.5
Schuger, L.6
-
245
-
-
84901295973
-
Identification of novel non-canonical RNA-binding sites in Gemin5 involved in internal initiation of translation
-
Fernandez-Chamorro J, Pineiro D, Gordon JMB, Ramajo J, Francisco-Velilla R, Macias MJ, et al. Identification of novel non-canonical RNA-binding sites in Gemin5 involved in internal initiation of translation. Nucleic Acids Res. 2014;42:5742-54.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 5742-5754
-
-
Fernandez-Chamorro, J.1
Pineiro, D.2
Gordon, J.M.B.3
Ramajo, J.4
Francisco-Velilla, R.5
Macias, M.J.6
-
246
-
-
0035977057
-
RNA Association defines a functionally conserved domain in the nuclear pore protein Nup153
-
1:CAS:528:DC%2BD3MXovFentro%3D 11567018
-
Dimaano C. RNA Association defines a functionally conserved domain in the nuclear pore protein Nup153. J Biol Chem. 2001;276:45349-57.
-
(2001)
J Biol Chem
, vol.276
, pp. 45349-45357
-
-
Dimaano, C.1
-
247
-
-
0347623201
-
The RNA binding domain within the nucleoporin Nup153 associates preferentially with single-stranded RNA
-
1:CAS:528:DC%2BD2cXhsFWnsg%3D%3D 14681581 1370514
-
Ball JR. The RNA binding domain within the nucleoporin Nup153 associates preferentially with single-stranded RNA. RNA. 2004;10:19-27.
-
(2004)
RNA
, vol.10
, pp. 19-27
-
-
Ball, J.R.1
-
248
-
-
84904061720
-
Interactions with RNA direct the Polycomb group protein SCML2 to chromatin where it represses target genes
-
24986859 4074974
-
Bonasio R, Lecona E, Narendra V, Voigt P, Parisi F, Kluger Y, Reinberg D. Interactions with RNA direct the Polycomb group protein SCML2 to chromatin where it represses target genes. Elife. 2014;3:e02637.
-
(2014)
Elife
, vol.3
-
-
Bonasio, R.1
Lecona, E.2
Narendra, V.3
Voigt, P.4
Parisi, F.5
Kluger, Y.6
Reinberg, D.7
-
249
-
-
84941128274
-
RNA-dependent chromatin localization of KDM4D lysine demethylase promotes H3K9me3 demethylation
-
25378304 4245933
-
Zoabi M, Nadar-Ponniah PT, Khoury-Haddad H, Usaj M, Budowski-Tal I, Haran T, Henn A, Mandel-Gutfreund Y, Ayoub N. RNA-dependent chromatin localization of KDM4D lysine demethylase promotes H3K9me3 demethylation. Nucleic Acids Res. 2014;42:13026-38.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 13026-13038
-
-
Zoabi, M.1
Nadar-Ponniah, P.T.2
Khoury-Haddad, H.3
Usaj, M.4
Budowski-Tal, I.5
Haran, T.6
Henn, A.7
Mandel-Gutfreund, Y.8
Ayoub, N.9
-
250
-
-
84946069451
-
UniProt: A hub for protein information
-
Database issue
-
UniProt Consortium: UniProt: a hub for protein information. Nucleic Acids Res 2015, 43(Database issue):D204-12.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. D204-D212
-
-
-
251
-
-
0034201441
-
EMBOSS: The European Molecular Biology Open Software Suite
-
1:CAS:528:DC%2BD3cXjvVygsbs%3D 10827456
-
Rice P, Longden I, Bleasby A: EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 2000, 16:276-277.
-
(2000)
Trends Genet
, vol.16
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
|