-
1
-
-
0013394889
-
Mechanisms of alternative pre-messenger RNA splicing
-
Black, D. L. Mechanisms of alternative pre-messenger RNA splicing. Annu. Rev. Biochem. 72, 291-336 (2003).
-
(2003)
Annu. Rev. Biochem.
, vol.72
, pp. 291-336
-
-
Black, D.L.1
-
2
-
-
60349104299
-
The spliceosome: Design principles of a dynamic RNP machine
-
Wahl, M. C., Will, C. L. & Luhrmann, R. The spliceosome: design principles of a dynamic RNP machine. Cell 136, 701-718 (2009).
-
(2009)
Cell
, vol.136
, pp. 701-718
-
-
Wahl, M.C.1
Will, C.L.2
Luhrmann, R.3
-
3
-
-
0030696675
-
The splicing factor BBP interacts specifically with the pre-mRNA branchpoint sequence UACUAAC
-
Berglund, J. A., Chua, K., Abovich, N., Reed, R. & Rosbash, M. The splicing factor BBP interacts specifically with the pre-mRNA branchpoint sequence UACUAAC. Cell 89, 781-787 (1997).
-
(1997)
Cell
, vol.89
, pp. 781-787
-
-
Berglund, J.A.1
Chua, K.2
Abovich, N.3
Reed, R.4
Rosbash, M.5
-
4
-
-
0024408832
-
Identification purification, and biochemical characterization of U2 small nuclear ribonucleoprotein auxiliary factor
-
Zamore, P. D. & Green, M. R. Identification, purification, and biochemical characterization of U2 small nuclear ribonucleoprotein auxiliary factor. Proc. Natl Acad. Sci. USA 86, 9243-9247 (1989).
-
(1989)
Proc. Natl Acad. Sci. USA
, vol.86
, pp. 9243-9247
-
-
Zamore, P.D.1
Green, M.R.2
-
5
-
-
0024747748
-
Mammalian U2 snRNP has a sequence-specific RNA-binding activity
-
Nelson, K. K. & Green, M. R. Mammalian U2 snRNP has a sequence-specific RNA-binding activity. Genes D e v. 3, 1562-1571 (1989).
-
(1989)
Genes D e V.
, vol.3
, pp. 1562-1571
-
-
Nelson, K.K.1
Green, M.R.2
-
6
-
-
0033835333
-
Sorting out the complexity of SR protein functions
-
Graveley, B. R. Sorting out the complexity of SR protein functions. RNA 6, 1197-1211 (2000).
-
(2000)
RNA
, vol.6
, pp. 1197-1211
-
-
Graveley, B.R.1
-
7
-
-
0033152209
-
Determinants of SR protein specificity
-
Tacke, R. & Manley, J. L. Determinants of SR protein specificity. Curr. Opin. Cell Biol. 11, 358-362 (1999).
-
(1999)
Curr. Opin. Cell Biol.
, vol.11
, pp. 358-362
-
-
Tacke, R.1
Manley, J.L.2
-
8
-
-
58249093940
-
The SR protein family of splicing factors: Master regulators of gene expression
-
Long, J. C. & Caceres, J. F. The SR protein family of splicing factors: master regulators of gene expression. Biochem. J. 417, 15-27 (2009).
-
(2009)
Biochem. J.
, vol.417
, pp. 15-27
-
-
Long, J.C.1
Caceres, J.F.2
-
9
-
-
0034256020
-
Alternative pre-mRNA splicing: The logic of combinatorial control
-
Smith, C. W. & Valcarcel, J. Alternative pre-mRNA splicing: the logic of combinatorial control. Trends Biochem. Sci. 25, 381-388 (2000).
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 381-388
-
-
Smith, C.W.1
Valcarcel, J.2
-
10
-
-
0036512117
-
Messenger-RNA-binding proteins and the messages they carry
-
Dreyfuss, G., Kim, V. N. & Kataoka, N. Messenger-RNA-binding proteins and the messages they carry. Nature Rev. Mol. Cell Biol. 3, 195-205 (2002).
-
(2002)
Nature Rev. Mol. Cell Biol.
, vol.3
, pp. 195-205
-
-
Dreyfuss, G.1
Kim, V.N.2
Kataoka, N.3
-
11
-
-
33749056769
-
An RNA map predicting Nova-dependent splicing regulation
-
Ule, J. et al. An RNA map predicting Nova-dependent splicing regulation. Nature 444, 580-586 (2006).
-
(2006)
Nature
, vol.444
, pp. 580-586
-
-
Ule, J.1
-
12
-
-
21244469877
-
Intronic CA-repeat and CA-rich elements: A new class of regulators of mammalian alternative splicing
-
Hui, J. et al. Intronic CA-repeat and CA-rich elements: a new class of regulators of mammalian alternative splicing. EMBO J. 24, 1988-1998 (2005).
-
(1988)
EMBO J.
, vol.24
, pp. 2005
-
-
Hui, J.1
-
13
-
-
59649107040
-
An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells
-
Yeo, G. W. et al. An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells. Nature Struct. Mol. Biol. 16, 130-137 (2009).
-
(2009)
Nature Struct. Mol. Biol.
, vol.16
, pp. 130-137
-
-
Yeo, G.W.1
-
14
-
-
50249176008
-
HnRNP H and hnRNP F complex with Fox2 to silence fibroblast growth factor receptor 2 exon IIIc
-
Mauger, D. M., Lin, C. & Garcia-Blanco, M. A. hnRNP H and hnRNP F complex with Fox2 to silence fibroblast growth factor receptor 2 exon IIIc. Mol. Cell. Biol. 28, 5403-5419 (2008).
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 5403-5419
-
-
Mauger, D.M.1
Lin, C.2
Garcia-Blanco, M.A.3
-
15
-
-
33749515475
-
An exonic splicing silencer represses spliceosome assembly after ATP-dependent exon recognition
-
House, A. E. & Lynch, K. W. An exonic splicing silencer represses spliceosome assembly after ATP-dependent exon recognition. Nature Struct. Mol. Biol. 13, 937-944 (2006).
-
(2006)
Nature Struct. Mol. Biol.
, vol.13
, pp. 937-944
-
-
House, A.E.1
Lynch, K.W.2
-
16
-
-
38849187162
-
Polypyrimidine tract binding protein controls the transition from exon definition to an intron defined spliceosome
-
Sharma, S., Kohlstaedt, L. A., Damianov, A., Rio, D. C. & Black, D. L. Polypyrimidine tract binding protein controls the transition from exon definition to an intron defined spliceosome. Nature Struct. Mol. Biol. 15, 183-191 (2008)
-
(2008)
Nature Struct. Mol. Biol.
, vol.15
, pp. 183-191
-
-
Sharma, S.1
Kohlstaedt, L.A.2
Damianov, A.3
Rio, D.C.4
Black, D.L.5
-
17
-
-
70350569859
-
-
note
-
This study shows that PTB inhibits Src exon N1 inclusion by preventing the transition from an exon-definition to an intron-definition complex and analyses the protein composition of different complexes.
-
-
-
-
18
-
-
0037013146
-
Splicing regulation at the second catalytic step by Sex-lethal involves 3′ splice site recognition by SPF45
-
Lallena, M. J., Chalmers, K. J., Llamazares, S., Lamond, A. I. & Valcarcel, J. Splicing regulation at the second catalytic step by Sex-lethal involves 3′ splice site recognition by SPF45. Cell 109, 285-296 (2002).
-
(2002)
Cell
, vol.109
, pp. 285-296
-
-
Lallena, M.J.1
Chalmers, K.J.2
Llamazares, S.3
Lamond, A.I.4
Valcarcel, J.5
-
19
-
-
30044441988
-
The human SWI/SNF subunit Brm is a regulator of alternative splicing
-
Batsche, E., Yaniv, M. & Muchardt, C. The human SWI/SNF subunit Brm is a regulator of alternative splicing. Nature Struct. Mol. Biol. 13, 22-29 (2006).
-
(2006)
Nature Struct. Mol. Biol.
, vol.13
, pp. 22-29
-
-
Batsche, E.1
Yaniv, M.2
Muchardt, C.3
-
20
-
-
33750596100
-
RNA polymerase II C-terminal domain mediates regulation of alternative splicing by SRp20
-
de la Mata, M. & Kornblihtt, A. R. RNA polymerase II C-terminal domain mediates regulation of alternative splicing by SRp20. Nature Struct. Mol. Biol. 13, 973-980 (2006).
-
(2006)
Nature Struct. Mol. Biol.
, vol.13
, pp. 973-980
-
-
De La Mata, M.1
Kornblihtt, A.R.2
-
21
-
-
36249027156
-
Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing
-
Sims, R. J. 3rd et al. Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing. Mol. Cell 28, 665-676 (2007).
-
(2007)
Mol. Cell
, vol.28
, pp. 665-676
-
-
Sims Iii, R.J.1
-
22
-
-
49449116959
-
The splicing factor SC35 has an active role in transcriptional elongation
-
Lin, S., Coutinho-Mansfield, G., Wang, D., Pandit, S. & Fu, X. D. The splicing factor SC35 has an active role in transcriptional elongation. Nature Struct. Mol. Biol. 15, 819-826 (2008).
-
(2008)
Nature Struct. Mol. Biol.
, vol.15
, pp. 819-826
-
-
Lin, S.1
Coutinho-Mansfield, G.2
Wang, D.3
Pandit, S.4
Fu, X.D.5
-
23
-
-
54049093628
-
Promoter-driven splicing regulation in fission yeast
-
Moldon, A. et al. Promoter-driven splicing regulation in fission yeast. Nature 455, 997-1000 (2008).
-
(2008)
Nature
, vol.455
, pp. 997-1000
-
-
Moldon, A.1
-
24
-
-
0035252410
-
Alternative splicing: Increasing diversity in the proteomic world
-
Graveley, B. R. Alternative splicing: increasing diversity in the proteomic world. Trends Genet. 17, 100-107 (2001)
-
(2001)
Trends Genet
, vol.17
, pp. 100-107
-
-
Graveley, B.R.1
-
25
-
-
70350568699
-
-
Blencowe, B. J. & Graveley, B. R. (eds) Springer, the Netherlands
-
Blencowe, B. J. & Graveley, B. R. (eds) Alternative Splicing in the Postgenomic Era. (Springer, the Netherlands, 2007).
-
(2007)
Alternative Splicing in the Postgenomic Era
-
-
-
26
-
-
0034906754
-
Alternative RNA splicing in the nervous system
-
Grabowski, P. J. & Black, D. L. Alternative RNA splicing in the nervous system. Prog. Neurobiol. 65, 289-308 (2001).
-
(2001)
Prog. Neurobiol
, vol.65
, pp. 289-308
-
-
Grabowski, P.J.1
Black, D.L.2
-
27
-
-
8644278829
-
Identification of alternative splicing regulators by RNA interference in Drosophila
-
Park, J. W., Parisky, K., Celotto, A. M., Reenan, R. A. & Graveley, B. R. Identification of alternative splicing regulators by RNA interference in Drosophila. Proc. Natl Acad. Sci. USA 101, 15974-15979 (2004).
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 15974-15979
-
-
Park, J.W.1
Parisky, K.2
Celotto, A.M.3
Reenan, R.A.4
Graveley, B.R.5
-
28
-
-
43049168361
-
SMN deficiency causes tissue-specific perturbations in the repertoire of snRNAs and widespread defects in splicing
-
Zhang, Z. et al. SMN deficiency causes tissue-specific perturbations in the repertoire of snRNAs and widespread defects in splicing. Cell 133, 585-600 (2008).
-
(2008)
Cell
, vol.133
, pp. 585-600
-
-
Zhang, Z.1
-
29
-
-
33745899048
-
Alternative splicing: New insights from global analyses
-
Blencowe, B. J. Alternative splicing: new insights from global analyses. Cell 126, 37-47 (2006).
-
(2006)
Cell
, vol.126
, pp. 37-47
-
-
Blencowe, B.J.1
-
30
-
-
56549101959
-
Alternative isoform regulation in human tissue transcriptomes
-
Wang, E. T. et al. Alternative isoform regulation in human tissue transcriptomes. Nature 456, 470-476 (2008).
-
(2008)
Nature
, vol.456
, pp. 470-476
-
-
Wang, E.T.1
-
31
-
-
56749098074
-
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
-
Pan, Q., Shai, O., Lee, L. J., Frey, B. J. & Blencowe, B. J. Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing. Nature Genet. 40, 1413-1415 (2008).
-
(2008)
Nature Genet.
, vol.40
, pp. 1413-1415
-
-
Pan, Q.1
Shai, O.2
Lee, L.J.3
Frey, B.J.4
Blencowe, B.J.5
-
32
-
-
56749164864
-
Expression of 24,426 human alternative splicing events and predicted cis regulation in 48 tissues and cell lines
-
Castle, J. C. et al. Expression of 24,426 human alternative splicing events and predicted cis regulation in 48 tissues and cell lines. Nature Genet. 40, 1416-1425 (2008).
-
(2008)
Nature Genet.
, vol.40
, pp. 1416-1425
-
-
Castle, J.C.1
-
33
-
-
47649124124
-
A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome
-
Sultan, M. et al. A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. Science 321, 956-960 (2008).
-
(2008)
Science
, vol.321
, pp. 956-960
-
-
Sultan, M.1
-
34
-
-
0030473462
-
Architectural limits on split genes
-
Sterner, D. A., Carlo, T. & Berget, S. M. Architectural limits on split genes. Proc. Natl Acad. Sci. USA 93, 15081-15085 (1996).
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 15081-15085
-
-
Sterner, D.A.1
Carlo, T.2
Berget, S.M.3
-
35
-
-
0028895417
-
Exon recognition in vertebrate splicing
-
Berget, S. M. Exon recognition in vertebrate splicing. J. Biol. Chem. 270, 2411-2414 (1995).
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 2411-2414
-
-
Berget, S.M.1
-
36
-
-
4143078172
-
Commitment to splice site pairing coincides with A complex formation
-
Lim, S. R. & Hertel, K. J. Commitment to splice site pairing coincides with A complex formation. Mol. Cell 15, 477-483 (2004).
-
(2004)
Mol. Cell
, vol.15
, pp. 477-483
-
-
Lim, S.R.1
Hertel, K.J.2
-
37
-
-
59449100357
-
Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex
-
Kotlajich, M. V., Crabb, T. L. & Hertel, K. J. Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex. Mol. Cell. Biol. 29, 1072-1082 (2009).
-
(2009)
Mol. Cell. Biol.
, vol.29
, pp. 1072-1082
-
-
Kotlajich, M.V.1
Crabb, T.L.2
Hertel, K.J.3
-
38
-
-
0032740121
-
Identification of a bidirectional splicing enhancer: Differential involvement of SR proteins in 5′ or 3′ splice site activation
-
Bourgeois, C. F., Popielarz, M., Hildwein, G. & Stevenin, J. Identification of a bidirectional splicing enhancer: differential involvement of SR proteins in 5′ or 3′ splice site activation. Mol. Cell. Biol. 19, 7347-7356 (1999).
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 7347-7356
-
-
Bourgeois, C.F.1
Popielarz, M.2
Hildwein, G.3
Stevenin, J.4
-
39
-
-
0029665533
-
The splicing factor U2AF35 mediates critical protein-protein interactions in constitutive and enhancer-dependent splicing
-
Zuo, P. & Maniatis, T. The splicing factor U2AF35 mediates critical protein-protein interactions in constitutive and enhancer-dependent splicing. Genes Dev. 10, 1356-1368 (1996).
-
(1996)
Genes Dev.
, vol.10
, pp. 1356-1368
-
-
Zuo, P.1
Maniatis, T.2
-
40
-
-
53549089314
-
Phosphorylation switches the general splicing repressor SRp38 to a sequence-specific activator
-
Feng, Y., Chen, M. & Manley, J. L. Phosphorylation switches the general splicing repressor SRp38 to a sequence-specific activator. Nature Struct. Mol. Biol. 15, 1040-1048 (2008).
-
(2008)
Nature Struct. Mol. Biol.
, vol.15
, pp. 1040-1048
-
-
Feng, Y.1
Chen, M.2
Manley, J.L.3
-
41
-
-
0034743627
-
The role of U2AF35 and U2AF65 in enhancer-dependent splicing
-
Graveley, B. R., Hertel, K. J. & Maniatis, T. The role of U2AF35 and U2AF65 in enhancer-dependent splicing. RNA 7, 806-818 (2001).
-
(2001)
RNA
, vol.7
, pp. 806-818
-
-
Graveley, B.R.1
Hertel, K.J.2
Maniatis, T.3
-
42
-
-
0028289188
-
Protein-protein interactions and 5′-splice-site recognition in mammalian mRNA precursors
-
Kohtz, J. D. et al. Protein-protein interactions and 5′-splice-site recognition in mammalian mRNA precursors. Nature 368, 119-124 (1994).
-
(1994)
Nature
, vol.368
, pp. 119-124
-
-
Kohtz, J.D.1
-
43
-
-
0027137934
-
Specific interactions between proteins implicated in splice site selection and regulated alternative splicing
-
Wu, J. Y. & Maniatis, T. Specific interactions between proteins implicated in splice site selection and regulated alternative splicing. Cell 75, 1061-1070 (1993).
-
(1993)
Cell
, vol.75
, pp. 1061-1070
-
-
Wu, J.Y.1
Maniatis, T.2
-
44
-
-
0031042396
-
Phosphorylation of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing
-
Xiao, S. H. & Manley, J. L. Phosphorylation of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing. Genes Dev. 11, 334-344 (1997).
-
(1997)
Genes Dev.
, vol.11
, pp. 334-344
-
-
Xiao, S.H.1
Manley, J.L.2
-
45
-
-
33750053338
-
In vivo requirement of the small subunit of U2AF for recognition of a weak 3′ splice site
-
Pacheco, T. R., Coelho, M. B., Desterro, J. M., Mollet, I. & Carmo-Fonseca, M. In vivo requirement of the small subunit of U2AF for recognition of a weak 3′ splice site. Mol. Cell. Biol. 26, 8183-8190 (2006).
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 8183-8190
-
-
Pacheco, T.R.1
Coelho, M.B.2
Desterro, J.M.3
Mollet, I.4
Carmo-Fonseca, M.5
-
46
-
-
0035846545
-
Multiple interactions between SRm160 and SR family proteins in enhancer-dependent splicing and development of C. elegans
-
Longman, D. et al. Multiple interactions between SRm160 and SR family proteins in enhancer-dependent splicing and development of C. elegans. Curr. Biol. 11, 1923-1933 (2001).
-
(2001)
Curr. Biol.
, vol.11
, pp. 1923-1933
-
-
Longman, D.1
-
47
-
-
0033984807
-
The SRm160/300 splicing coactivator subunits
-
Blencowe, B. J. et al. The SRm160/300 splicing coactivator subunits. RNA 6, 111-120 (2000).
-
(2000)
RNA
, vol.6
, pp. 111-120
-
-
Blencowe, B.J.1
-
48
-
-
0032914520
-
Functions of SR and Tra2 proteins in pre-mRNA splicing regulation
-
Tacke, R. & Manley, J. L. Functions of SR and Tra2 proteins in pre-mRNA splicing regulation. Proc. Soc. Exp. Biol. Med. 220, 59-63 (1999).
-
(1999)
Proc. Soc. Exp. Biol. Med.
, vol.220
, pp. 59-63
-
-
Tacke, R.1
Manley, J.L.2
-
49
-
-
23744492690
-
Regulation of Fas alternative splicing by antagonistic effects of TIA-1 and PTB on exon definition
-
Izquierdo, J. M. et al. Regulation of Fas alternative splicing by antagonistic effects of TIA-1 and PTB on exon definition. Mol. Cell 19, 475-484 (2005).
-
(2005)
Mol. Cell
, vol.19
, pp. 475-484
-
-
Izquierdo, J.M.1
-
50
-
-
0037121924
-
The splicing regulator TIA-1 interacts with U1-C to promote U1 snRNP recruitment to 5′ splice sites
-
Forch, P., Puig, O., Martinez, C., Seraphin, B. & Valcarcel, J. The splicing regulator TIA-1 interacts with U1-C to promote U1 snRNP recruitment to 5′ splice sites. EMBO J. 21, 6882-6892 (2002).
-
(2002)
EMBO J.
, vol.21
, pp. 6882-6892
-
-
Forch, P.1
Puig, O.2
Martinez, C.3
Seraphin, B.4
Valcarcel, J.5
-
51
-
-
38949098164
-
Signal-regulated pre-mRNA occupancy by the general splicing factor U2AF
-
Tisserant, A. & Konig, H. Signal-regulated pre-mRNA occupancy by the general splicing factor U2AF. PLoS ONE 3, e1418 (2008).
-
(2008)
PLoS ONE
, vol.3
-
-
Tisserant, A.1
Konig, H.2
-
52
-
-
0032561190
-
Oncoprotein TLS interacts with serine-arginine proteins involved in RNA splicing
-
DOI 10.1074/jbc.273.43.27761
-
Yang, L., Embree, L. J., Tsai, S. & Hickstein, D. D. Oncoprotein TLS interacts with serine-arginine proteins involved in RNA splicing. J. Biol. Chem. 273, 27761-27764 (1998). (Pubitemid 28496059)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.43
, pp. 27761-27764
-
-
Yang, L.1
Embree, L.J.2
Tsai, S.3
Hickstein, D.D.4
-
53
-
-
0032713422
-
And characterization of two neural-salient serine/arginine-rich (NSSR) proteins involved in the regulation of alternative splicing in neurones
-
Komatsu, M., Kominami, E., Arahata, K. & Tsukahara, T. Cloning and characterization of two neural-salient serine/arginine-rich (NSSR) proteins involved in the regulation of alternative splicing in neurones. Genes Cells 4, 593-606 (1999).
-
(1999)
Genes Cells
, vol.4
, pp. 593-606
-
-
Komatsu, M.1
Kominami, E.2
Arahata, K.3
Cloning, T.T.4
-
54
-
-
0035966063
-
Serine-arginine (SR) protein-like factors that antagonize authentic SR proteins and regulate alternative splicing
-
Cowper, A. E., Caceres, J. F., Mayeda, A. & Screaton, G. R. Serine-arginine (SR) protein-like factors that antagonize authentic SR proteins and regulate alternative splicing. J. Biol. Chem. 276, 48908-48914 (2001).
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 48908-48914
-
-
Cowper, A.E.1
Caceres, J.F.2
Mayeda, A.3
Screaton, G.R.4
-
55
-
-
0036848091
-
The SR protein SRp38 represses splicing in M phase cells
-
Shin, C. & Manley, J. L. The SR protein SRp38 represses splicing in M phase cells. Cell 111, 407-417 (2002).
-
(2002)
Cell
, vol.111
, pp. 407-417
-
-
Shin, C.1
Manley, J.L.2
-
56
-
-
1142310938
-
Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock
-
Shin, C., Feng, Y. & Manley, J. L. Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock. Nature 427, 553-558 (2004).
-
(2004)
Nature
, vol.427
, pp. 553-558
-
-
Shin, C.1
Feng, Y.2
Manley, J.L.3
-
57
-
-
0025346111
-
Purification and characterization of pre-mRNA splicing factor SF2 from HeLa cells
-
Krainer, A. R., Conway, G. C. & Kozak, D. Purification and characterization of pre-mRNA splicing factor SF2 from HeLa cells. Genes Dev. 4, 1158-1171 (1990).
-
(1990)
Genes Dev.
, vol.4
, pp. 1158-1171
-
-
Krainer, A.R.1
Conway, G.C.2
Kozak, D.3
-
58
-
-
0029055472
-
Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins
-
Singh, R., Valcarcel, J. & Green, M. R. Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins. Science 268, 1173-1176 (1995).
-
(1995)
Science
, vol.268
, pp. 1173-1176
-
-
Singh, R.1
Valcarcel, J.2
Green, M.R.3
-
59
-
-
32344437827
-
Novel modes of splicing repression by PTB
-
Spellman, R. & Smith, C. W. Novel modes of splicing repression by PTB. Trends Biochem. Sci. 31, 73-76 (2006).
-
(2006)
Trends Biochem. Sci.
, vol.31
, pp. 73-76
-
-
Spellman, R.1
Smith, C.W.2
-
60
-
-
33845225902
-
The polypyrimidine tract binding protein (PTB) represses splicing of exon 6B from the β-tropomyosin pre-mRNA by directly interfering with the binding of the U2AF65 subunit
-
Sauliere, J., Sureau, A., Expert-Bezancon, A. & Marie, J. The polypyrimidine tract binding protein (PTB) represses splicing of exon 6B from the β-tropomyosin pre-mRNA by directly interfering with the binding of the U2AF65 subunit. Mol. Cell. Biol. 26, 8755-8769 (2006).
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 8755-8769
-
-
Sauliere, J.1
Sureau, A.2
Expert-Bezancon, A.3
Marie, J.4
-
61
-
-
0035886048
-
The hnRNP A1 protein regulates HIV-1 tat splicing via a novel intron silencer element
-
Tange, T. O., Damgaard, C. K., Guth, S., Valcarcel, J. & Kjems, J. The hnRNP A1 protein regulates HIV-1 tat splicing via a novel intron silencer element. EMBO J. 20, 5748-5758 (2001).
-
(2001)
EMBO J.
, vol.20
, pp. 5748-5758
-
-
Tange, T.O.1
Damgaard, C.K.2
Guth, S.3
Valcarcel, J.4
Kjems, J.5
-
62
-
-
50249117753
-
Repression of prespliceosome complex formation at two distinct steps by Fox-1/ Fox-2 proteins
-
Zhou, H. L. & Lou, H. Repression of prespliceosome complex formation at two distinct steps by Fox-1/ Fox-2 proteins. Mol. Cell. Biol. 28, 5507-5516 (2008).
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 5507-5516
-
-
Zhou, H.L.1
Lou, H.2
-
63
-
-
38949098620
-
Regulation of neuron-specific alternative splicing of neurofibromatosis type 1 pre-mRNA
-
Zhu, H., Hinman, M. N., Hasman, R. A., Mehta, P. & Lou, H. Regulation of neuron-specific alternative splicing of neurofibromatosis type 1 pre-mRNA. Mol. Cell. Biol. 28, 1240-1251 (2008).
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 1240-1251
-
-
Zhu, H.1
Hinman, M.N.2
Hasman, R.A.3
Mehta, P.4
Lou, H.5
-
64
-
-
0041665176
-
A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy
-
Kashima, T. & Manley, J. L. A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy. Nature Genet. 34, 460-463 (2003).
-
(2003)
Nature Genet.
, vol.34
, pp. 460-463
-
-
Kashima, T.1
Manley, J.L.2
-
65
-
-
62549087007
-
Differential 3′ splice site recognition of SMN1 and SMN2 transcripts by U2AF and U2 snRNP
-
Martins de Araujo, M., Bonnal, S., Hastings, M. L., Krainer, A. R. & Valcarcel, J. Differential 3′ splice site recognition of SMN1 and SMN2 transcripts by U2AF and U2 snRNP. RNA 15, 515-523 (2009).
-
(2009)
RNA
, vol.15
, pp. 515-523
-
-
Martins De Araujo, M.1
Bonnal, S.2
Hastings, M.L.3
Krainer, A.R.4
Valcarcel, J.5
-
66
-
-
23744484618
-
Polypyrimidine tract binding protein blocks the 5′ splice site-dependent assembly of U2AF and the prespliceosomal e complex
-
Sharma, S., Falick, A. M. & Black, D. L. Polypyrimidine tract binding protein blocks the 5′ splice site-dependent assembly of U2AF and the prespliceosomal E complex. Mol. Cell 19, 485-496 (2005).
-
(2005)
Mol. Cell
, vol.19
, pp. 485-496
-
-
Sharma, S.1
Falick, A.M.2
Black, D.L.3
-
67
-
-
0036849108
-
HnRNP A1 controls HIV-1 mRNA splicing through cooperative binding to intron and exon splicing silencers in the context of a conserved secondary structure
-
Damgaard, C. K., Tange, T. O. & Kjems, J. hnRNP A1 controls HIV-1 mRNA splicing through cooperative binding to intron and exon splicing silencers in the context of a conserved secondary structure. RNA 8, 1401-1415 (2002).
-
(2002)
RNA
, vol.8
, pp. 1401-1415
-
-
Damgaard, C.K.1
Tange, T.O.2
Kjems, J.3
-
68
-
-
0036674179
-
High-affinity hnRNP A1 binding sites and duplex-forming inverted repeats have similar effects on 5′ splice site selection in support of a common looping out and repression mechanism
-
Nasim, F. U., Hutchison, S., Cordeau, M. & Chabot, B. High-affinity hnRNP A1 binding sites and duplex-forming inverted repeats have similar effects on 5′ splice site selection in support of a common looping out and repression mechanism. RNA 8, 1078-1089 (2002).
-
(2002)
RNA
, vol.8
, pp. 1078-1089
-
-
Nasim, F.U.1
Hutchison, S.2
Cordeau, M.3
Chabot, B.4
-
69
-
-
0037119437
-
Distinct sets of adjacent heterogeneous nuclear ribonucleoprotein (hnRNP) A1/A2 binding sites control 5′ splice site selection in the hnRNP A1 mRNA precursor
-
Hutchison, S., LeBel, C., Blanchette, M. & Chabot, B. Distinct sets of adjacent heterogeneous nuclear ribonucleoprotein (hnRNP) A1/A2 binding sites control 5′ splice site selection in the hnRNP A1 mRNA precursor. J. Biol. Chem. 277, 29745-29752 (2002).
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 29745-29752
-
-
Hutchison, S.1
Lebel, C.2
Blanchette, M.3
Chabot, B.4
-
70
-
-
36248987806
-
HnRNP A1 functions with specificity in repression of SMN2 exon 7 splicing
-
Kashima, T., Rao, N., David, C. J. & Manley, J. L. hnRNP A1 functions with specificity in repression of SMN2 exon 7 splicing. Hum. Mol. Genet. 16, 3149-3159 (2007).
-
(2007)
Hum. Mol. Genet.
, vol.16
, pp. 3149-3159
-
-
Kashima, T.1
Rao, N.2
David, C.J.3
Manley, J.L.4
-
71
-
-
33847665554
-
An intronic element contributes to splicing repression in spinal muscular atrophy
-
Kashima, T., Rao, N. & Manley, J. L. An intronic element contributes to splicing repression in spinal muscular atrophy. Proc. Natl Acad. Sci. USA 104, 3426-3431 (2007).
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 3426-3431
-
-
Kashima, T.1
Rao, N.2
Manley, J.L.3
-
72
-
-
0033634948
-
Multisite RNA binding and release of polypyrimidine tract binding protein during the regulation of c-src neural-specific splicing
-
Chou, M. Y., Underwood, J. G., Nikolic, J., Luu, M. H. & Black, D. L. Multisite RNA binding and release of polypyrimidine tract binding protein during the regulation of c-src neural-specific splicing. Mol. Cell 5, 949-957 (2000).
-
(2000)
Mol. Cell
, vol.5
, pp. 949-957
-
-
Chou, M.Y.1
Underwood, J.G.2
Nikolic, J.3
Luu, M.H.4
Black, D.L.5
-
73
-
-
0027151934
-
Modulation of exon skipping and inclusion by heterogeneous nuclear ribonucleoprotein A1 and pre-mRNA splicing factor SF2/ASF
-
Mayeda, A., Helfman, D. M. & Krainer, A. R. Modulation of exon skipping and inclusion by heterogeneous nuclear ribonucleoprotein A1 and pre-mRNA splicing factor SF2/ASF. Mol. Cell. Biol. 13, 2993-3001 (1993).
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 2993-3001
-
-
Mayeda, A.1
Helfman, D.M.2
Krainer, A.R.3
-
74
-
-
1642372088
-
SC35 and heterogeneous nuclear ribonucleoprotein A/B proteins bind to a juxtaposed exonic splicing enhancer/exonic splicing silencer element to regulate HIV-1 tat exon 2 splicing
-
Zahler, A. M., Damgaard, C. K., Kjems, J. & Caputi, M. SC35 and heterogeneous nuclear ribonucleoprotein A/B proteins bind to a juxtaposed exonic splicing enhancer/exonic splicing silencer element to regulate HIV-1 tat exon 2 splicing. J. Biol. Chem. 279, 10077-10084 (2004).
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 10077-10084
-
-
Zahler, A.M.1
Damgaard, C.K.2
Kjems, J.3
Caputi, M.4
-
75
-
-
0034671932
-
Pre-mRNA splicing in the absence of an SR protein RS domain
-
Zhu, J. & Krainer, A. R. Pre-mRNA splicing in the absence of an SR protein RS domain. Genes Dev. 14, 3166-3178 (2000).
-
(2000)
Genes Dev.
, vol.14
, pp. 3166-3178
-
-
Zhu, J.1
Krainer, A.R.2
-
76
-
-
33845213293
-
Activation of α-tropomyosin exon 2 is regulated by the SR protein 9G8 and heterogeneous nuclear ribonucleoproteins H and F.
-
Crawford, J. B. & Patton, J. G. Activation of α-tropomyosin exon 2 is regulated by the SR protein 9G8 and heterogeneous nuclear ribonucleoproteins H and F. Mol. Cell. Biol. 26, 8791-8802 (2006).
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 8791-8802
-
-
Crawford, J.B.1
Patton, J.G.2
-
77
-
-
4644256654
-
HnRNP A1 and the SR proteins ASF/SF2 and SC35 have antagonistic functions in splicing of β-tropomyosin exon 6B
-
Expert-Bezancon, A. et al. hnRNP A1 and the SR proteins ASF/SF2 and SC35 have antagonistic functions in splicing of β-tropomyosin exon 6B. J. Biol. Chem. 279, 38249-38259 (2004).
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 38249-38259
-
-
Expert-Bezancon, A.1
-
78
-
-
0036203307
-
Dynamic antagonism between ETR-3 and PTB regulates cell type-specific alternative splicing
-
Charlet, B. N., Logan, P., Singh, G. & Cooper, T. A. Dynamic antagonism between ETR-3 and PTB regulates cell type-specific alternative splicing. Mol. Cell 9, 649-658 (2002).
-
(2002)
Mol. Cell
, vol.9
, pp. 649-658
-
-
Charlet, B.N.1
Logan, P.2
Singh, G.3
Cooper, T.A.4
-
79
-
-
60549097502
-
Genome-wide analysis of alternative pre-mRNA splicing and RNA-binding specificities of the Drosophila hnRNP A/B family members
-
Blanchette, M. et al. Genome-wide analysis of alternative pre-mRNA splicing and RNA-binding specificities of the Drosophila hnRNP A/B family members. Mol. Cell 33, 438-449 (2009).
-
(2009)
Mol. Cell
, vol.33
, pp. 438-449
-
-
Blanchette, M.1
-
80
-
-
38649129366
-
Diverse roles of hnRNP L in mammalian mRNA processing: A combined microarray and RNAi analysis
-
Hung, L. H. et al. Diverse roles of hnRNP L in mammalian mRNA processing: a combined microarray and RNAi analysis. RNA 14, 284-296 (2008).
-
(2008)
RNA
, vol.14
, pp. 284-296
-
-
Hung, L.H.1
-
81
-
-
56549105330
-
HITS-CLIP yields genome-wide insights into brain alternative RNA processing
-
Licatalosi, D. D. et al. HITS-CLIP yields genome-wide insights into brain alternative RNA processing. Nature 456, 464-469 (2008).
-
(2008)
Nature
, vol.456
, pp. 464-469
-
-
Licatalosi, D.D.1
-
82
-
-
18444362088
-
Nova autoregulation reveals dual functions in neuronal splicing
-
Dredge, B. K., Stefani, G., Engelhard, C. C. & Darnell, R. B. Nova autoregulation reveals dual functions in neuronal splicing. EMBO J. 24, 1608-1620 (2005).
-
(2005)
EMBO J.
, vol.24
, pp. 1608-1620
-
-
Dredge, B.K.1
Stefani, G.2
Engelhard, C.C.3
Darnell, R.B.4
-
83
-
-
33244483620
-
Intronic binding sites for hnRNP A/B and hnRNP F/H proteins stimulate pre-mRNA splicing
-
Martinez-Contreras, R. et al. Intronic binding sites for hnRNP A/B and hnRNP F/H proteins stimulate pre-mRNA splicing. PLoS Biol. 4, e21 (2006).
-
(2006)
PLoS Biol.
, vol.4
-
-
Martinez-Contreras, R.1
-
84
-
-
42449098125
-
Splicing regulation: From a parts list of regulatory elements to an integrated splicing code
-
Wang, Z. & Burge, C. B. Splicing regulation: from a parts list of regulatory elements to an integrated splicing code. RNA 14, 802-813 (2008).
-
(2008)
RNA
, vol.14
, pp. 802-813
-
-
Wang, Z.1
Burge, C.B.2
-
85
-
-
0038382977
-
Nova regulates GABAA receptor y2 alternative splicing via a distal downstream UCAU-rich intronic splicing enhancer
-
Dredge, B. K. & Darnell, R. B. Nova regulates GABAA receptor y2 alternative splicing via a distal downstream UCAU-rich intronic splicing enhancer. Mol. Cell. Biol. 23, 4687-4700 (2003).
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 4687-4700
-
-
Dredge, B.K.1
Darnell, R.B.2
-
86
-
-
34250313662
-
Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes
-
Schaub, M. C, Lopez, S. R. & Caputi, M. Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes. J. Biol. Chem. 282, 13617-13626 (2007).
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 13617-13626
-
-
Schaub, M.C.1
Lopez, S.R.2
Caputi, M.3
-
87
-
-
0035941211
-
Determination of the RNA binding specificity of the heterogeneous nuclear ribonucleoprotein (hnRNP) H/H/F/2H9 family
-
Caputi, M. & Zahler, A. M. Determination of the RNA binding specificity of the heterogeneous nuclear ribonucleoprotein (hnRNP) H/H/F/2H9 family. J. Biol. Chem. 276, 43850-43859 (2001).
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 43850-43859
-
-
Caputi, M.1
Zahler, A.M.2
-
88
-
-
54849438715
-
Identification of nuclear and cytoplasmic mRNA targets for the shuttling protein SF2/ASF
-
Sanford, J. R. et al. Identification of nuclear and cytoplasmic mRNA targets for the shuttling protein SF2/ASF. PLoS ONE 3, e3369 (2008).
-
(2008)
PLoS ONE
, vol.3
-
-
Sanford, J.R.1
-
89
-
-
61849139645
-
Splicing factor SFRS1 recognizes a functionally diverse landscape of RNA transcripts
-
Sanford, J. R. et al. Splicing factor SFRS1 recognizes a functionally diverse landscape of RNA transcripts. Genome Res. 19, 381-394 (2009).
-
(2009)
Genome Res.
, vol.19
, pp. 381-394
-
-
Sanford, J.R.1
-
90
-
-
26244435561
-
Mutually exclusive splicing of the insect Dscam pre-mRNA directed by competing intronic RNA secondary structures
-
Graveley, B. R. Mutually exclusive splicing of the insect Dscam pre-mRNA directed by competing intronic RNA secondary structures. Cell 123, 65-73 (2005).
-
(2005)
Cell
, vol.123
, pp. 65-73
-
-
Graveley, B.R.1
-
91
-
-
36849015934
-
A regulator of Dscam mutually exclusive splicing fidelity. Nature Struct
-
Olson, S. et al. A regulator of Dscam mutually exclusive splicing fidelity. Nature Struct. Mol. Biol. 14, 1134-1140 (2007).
-
(2007)
Mol. Biol.
, vol.14
, pp. 1134-1140
-
-
Olson, S.1
-
92
-
-
0033591225
-
5' splice site mutations in tau associated with the inherited dementia FTDP-17 affect a stem-loop structure that regulates alternative splicing of exon 10
-
Grover, A. et al. 5' splice site mutations in tau associated with the inherited dementia FTDP-17 affect a stem-loop structure that regulates alternative splicing of exon 10. J. Biol. Chem. 274, 15134-15143 (1999).
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 15134-15143
-
-
Grover, A.1
-
93
-
-
37349056702
-
Pre-mRNA secondary structures influence exon recognition
-
Hiller, M., Zhang, Z., Backofen, R. & Stamm, S. Pre-mRNA secondary structures influence exon recognition. PLoS Genet. 3, e204 (2007).
-
(2007)
PLoS Genet.
, vol.3
-
-
Hiller, M.1
Zhang, Z.2
Backofen, R.3
Stamm, S.4
-
94
-
-
51449107580
-
P68 RNA helicase (DDX5) alters activity of cis-and trans-acting factors of the alternative splicing of H-Ras
-
Camats, M., Guil, S., Kokolo, M. & Bach-Elias, M. P68 RNA helicase (DDX5) alters activity of cis-and trans-acting factors of the alternative splicing of H-Ras. PLoS ONE 3, e2926 (2008).
-
(2008)
PLoS ONE
, vol.3
-
-
Camats, M.1
Guil, S.2
Kokolo, M.3
Bach-Elias, M.4
-
95
-
-
0026770679
-
In vivo splicing of the beta tropomyosin pre-mRNA: A role for branch point and donor site competition
-
Libri, D., Balvay, L. & Fiszman, M. Y. In vivo splicing of the beta tropomyosin pre-mRNA: a role for branch point and donor site competition. Mol. Cell. Biol. 12, 3204-32 15 (1992).
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 3204-3215
-
-
Libri, D.1
Balvay, L.2
Fiszman, M.Y.3
-
96
-
-
58049217240
-
Riboswitch RNAs: Using RNA to sense cellular metabolism
-
Henkin, T. M. Riboswitch RNAs: using RNA to sense cellular metabolism. Genes Dev. 22, 3383-3390 (2008).
-
(2008)
Genes Dev.
, vol.22
, pp. 3383-3390
-
-
Henkin . T, M.1
-
97
-
-
34249278470
-
Control of alternative RNA splicing and gene expression by eukaryotic riboswitches
-
Cheah, M. T., Wachter, A., Sudarsan, N. & Breaker, R. R. Control of alternative RNA splicing and gene expression by eukaryotic riboswitches. Nature 447, 497-500 (2007).
-
(2007)
Nature
, vol.447
, pp. 497-500
-
-
Cheah, M.T.1
Wachter, A.2
Sudarsan, N.3
Breaker, R.R.4
-
99
-
-
30844442607
-
The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C
-
Kishore, S. & Stamm, S. The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C. Science 311, 230-232 (2006).
-
(2006)
Science
, vol.311
, pp. 230-232
-
-
Kishore, S.1
Stamm, S.2
-
100
-
-
57649231776
-
Dynamic regulation of alternative splicing by silencers that modulate 5' splice site competition
-
Yu, Y et al. Dynamic regulation of alternative splicing by silencers that modulate 5' splice site competition. Cell 135, 1224-1236 (2008).
-
(2008)
Cell
, vol.135
, pp. 1224-1236
-
-
Yu, Y.1
-
101
-
-
34547212309
-
The microRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing
-
Makeyev, E. V., Zhang, J., Carrasco, M. A. & Maniatis, T. The microRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing. Mol. Cell 27, 435-448 (2007).
-
(2007)
Mol. Cell
, vol.27
, pp. 435-448
-
-
Makeyev, E.V.1
Zhang, J.2
Carrasco, M.A.3
Maniatis, T.4
-
102
-
-
34347384211
-
A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons
-
Boutz, P. L. et al. A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons. Genes Dev. 21, 1636-1652 (2007)
-
(2007)
Genes Dev.
, vol.21
, pp. 1636-1652
-
-
Boutz, P.L.1
-
103
-
-
70350569858
-
-
note
-
Using sirNA and microarray analysis, the authors show that the PTB-to-nPTB switch provides a post-transcriptional mechanism that is important for programming neuronal differentiation.
-
-
-
-
104
-
-
34347378276
-
PTB/nPTB switch: A post-transcriptional mechanism for programming neuronal differentiation
-
Coutinho-Mansfield, G. C., Xue, Y., Zhang, Y. & Fu, X. D. PTB/nPTB switch: a post-transcriptional mechanism for programming neuronal differentiation. Genes Dev. 21, 1573-1577 (2007).
-
(2007)
Genes Dev.
, vol.21
, pp. 1573-1577
-
-
Coutinho-Mansfield, G.C.1
Xue, Y.2
Zhang, Y.3
Fu, X.D.4
-
105
-
-
34547205013
-
Crossregulation and functional redundancy between the splicing regulator PTB and its paralogs nPTB and ROD1
-
Spellman, R., Llorian, M. & Smith, C. W. Crossregulation and functional redundancy between the splicing regulator PTB and its paralogs nPTB and ROD1. Mol. Cell 27, 420-434 (2007).
-
(2007)
Mol. Cell
, vol.27
, pp. 420-434
-
-
Spellman, R.1
Llorian, M.2
Smith, C.W.3
-
106
-
-
11144320747
-
Structural and functional analysis of essential pre-mRNA splicing factor Prp19p
-
Ohi, M. D. et al. Structural and functional analysis of essential pre-mRNA splicing factor Prp19p. Mol. Cell. Biol. 25, 451-460 (2005).
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 451-460
-
-
Ohi, M.D.1
-
107
-
-
42249093677
-
Isolation of an active step i spliceosome and composition of its RNP core
-
Bessonov, S., Anokhina, M., Will, C. L., Urlaub, H. & Luhrmann, R. Isolation of an active step I spliceosome and composition of its RNP core. Nature 452, 846-850 (2008).
-
(2008)
Nature
, vol.452
, pp. 846-850
-
-
Bessonov, S.1
Anokhina, M.2
Will, C.L.3
Urlaub, H.4
Luhrmann, R.5
-
108
-
-
0033022124
-
The SRm160/300 splicing coactivator is required for exon-enhancer function
-
Eldridge, A. G., Li, Y., Sharp, P. A. & Blencowe, B. J. The SRm160/300 splicing coactivator is required for exon-enhancer function. Proc. Natl Acad. Sci. USA 96, 6125-6130 (1999).
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 6125-6130
-
-
Eldridge, A.G.1
Li, Y.2
Sharp, P.A.3
Blencowe, B.J.4
-
109
-
-
0033755837
-
LUCA15, a putative tumour suppressor gene encoding an RNA-binding nuclear protein, is down-regulated in ras-transformed Rat-1 cells
-
Edamatsu, H., Kaziro, Y. & Itoh, H. LUCA15, a putative tumour suppressor gene encoding an RNA-binding nuclear protein, is down-regulated in ras-transformed Rat-1 cells. Genes Cells 5, 849-858 (2000).
-
(2000)
Genes Cells
, vol.5
, pp. 849-858
-
-
Edamatsu, H.1
Kaziro, Y.2
Itoh, H.3
-
110
-
-
0036792645
-
Candidate tumour suppressor LUCA-15 can regulate multiple apoptotic pathways
-
Mourtada-Maarabouni, M., Sutherland, L. C. & Williams, G. T. Candidate tumour suppressor LUCA-15 can regulate multiple apoptotic pathways. Apoptosis 7, 421-432 (2002).
-
(2002)
Apoptosis
, vol.7
, pp. 421-432
-
-
Mourtada-Maarabouni, M.1
Sutherland, L.C.2
Williams, G.T.3
-
111
-
-
53149145051
-
RBM5/Luca-15/H37 regulates Fas alternative splice site pairing after exon definition
-
Bonnal, S. et al. RBM5/Luca-15/H37 regulates Fas alternative splice site pairing after exon definition. Mol. Cell 32, 81-95 (2008).
-
(2008)
Mol. Cell
, vol.32
, pp. 81-95
-
-
Bonnal, S.1
-
112
-
-
30044440197
-
Chromatin transcript elongation and alternative splicing
-
Kornblihtt, A. R. Chromatin, transcript elongation and alternative splicing. Nature Struct. Mol. Biol. 13, 5-7 (2006).
-
(2006)
Nature Struct. Mol. Biol.
, vol.13
, pp. 5-7
-
-
Kornblihtt, A.R.1
-
113
-
-
34250363024
-
SR proteins function in coupling RNAP II transcription to pre-mRNA splicing
-
Das, R. et al. SR proteins function in coupling RNAP II transcription to pre-mRNA splicing. Mol. Cell 26, 867-881 (2007).
-
(2007)
Mol. Cell
, vol.26
, pp. 867-881
-
-
Das, R.1
-
114
-
-
1442281514
-
Differential recruitment of nuclear receptor coactivators may determine alternative RNA splice site choice in target genes
-
Auboeuf, D. et al. Differential recruitment of nuclear receptor coactivators may determine alternative RNA splice site choice in target genes. Proc. Natl Acad. Sci. USA 101, 2270-2274 (2004).
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 2270-2274
-
-
Auboeuf, D.1
-
115
-
-
0033180615
-
Coupling of transcription with alternative splicing: RNA pol II promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer
-
Cramer, P. et al. Coupling of transcription with alternative splicing: RNA pol II promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer. Mol. Cell 4, 251-258 (1999).
-
(1999)
Mol. Cell
, vol.4
, pp. 251-258
-
-
Cramer, P.1
-
116
-
-
0033638283
-
Direct coupling of transcription and mRNA processing through the thermogenic coactivator PGC-1
-
Monsalve, M. et al. Direct coupling of transcription and mRNA processing through the thermogenic coactivator PGC-1. Mol. Cell 6, 307-316 (2000).
-
(2000)
Mol. Cell
, vol.6
, pp. 307-316
-
-
Monsalve, M.1
-
117
-
-
0141888375
-
A slow RNA polymerase II affects alternative splicing in vivo
-
de la Mata, M. et al. A slow RNA polymerase II affects alternative splicing in vivo. Mol. Cell 12, 525-532 (2003).
-
(2003)
Mol. Cell
, vol.12
, pp. 525-532
-
-
De La Mata, M.1
-
118
-
-
65549147264
-
DNA damage regulates alternative splicing through inhibition of RNA polymerase II elongation
-
Munoz, M. J. et al. DNA damage regulates alternative splicing through inhibition of RNA polymerase II elongation. Cell 137, 708-720 (2009).
-
(2009)
Cell
, vol.137
, pp. 708-720
-
-
Munoz, M.J.1
-
119
-
-
33751090746
-
Phosphorylation and functions of the RNA polymerase II CTD
-
Phatnani, H. P. & Greenleaf, A. L. Phosphorylation and functions of the RNA polymerase II CTD. Genes Dev. 20, 2922-2936 (2006).
-
(2006)
Genes Dev.
, vol.20
, pp. 2922-2936
-
-
Phatnani, H.P.1
Greenleaf, A.L.2
-
120
-
-
0036052014
-
CTD phosphatase: Role in RNA polymerase II cycling and the regulation of transcript elongation. Prog. Nucleic Acid Res
-
Lin, P. S., Marshall, N. F. & Dahmus, M. E. CTD phosphatase: role in RNA polymerase II cycling and the regulation of transcript elongation. Prog. Nucleic Acid Res. Mol. Biol. 72, 333-365 (2002).
-
(2002)
Mol. Biol.
, vol.72
, pp. 333-365
-
-
Lin, P.S.1
Marshall, N.F.2
Dahmus, M.E.3
-
121
-
-
38949133822
-
The search for alternative splicing regulators: New approaches offer a path to a splicing code
-
David, C. J. & Manley, J. L. The search for alternative splicing regulators: new approaches offer a path to a splicing code. Genes Dev. 22, 279-285 (2008).
-
(2008)
Genes Dev.
, vol.22
, pp. 279-285
-
-
David, C.J.1
Manley, J.L.2
-
122
-
-
38949110702
-
STAR family RNA-binding protein ASD-2 regulates developmental switching of mutually exclusive alternative splicing in vivo
-
Ohno, G., Hagiwara, M. & Kuroyanagi, H. STAR family RNA-binding protein ASD-2 regulates developmental switching of mutually exclusive alternative splicing in vivo. Genes Dev. 22, 360-374 (2008).
-
(2008)
Genes Dev.
, vol.22
, pp. 360-374
-
-
Ohno, G.1
Hagiwara, M.2
Kuroyanagi, H.3
-
123
-
-
35548940665
-
Neuronal regulation of alternative pre-mRNA splicing
-
Li, Q., Lee, J. A. & Black, D. L. Neuronal regulation of alternative pre-mRNA splicing. Nature Rev. Neurosci. 8, 819-831 (2007).
-
(2007)
Nature Rev. Neurosci.
, vol.8
, pp. 819-831
-
-
Li, Q.1
Lee, J.A.2
Black, D.L.3
-
124
-
-
23044431574
-
Nova regulates brain-specific splicing to shape the synapse
-
Ule, J. et al. Nova regulates brain-specific splicing to shape the synapse. Nature Genet. 37, 844-852 (2005).
-
(2005)
Nature Genet.
, vol.37
, pp. 844-852
-
-
Ule, J.1
-
125
-
-
0036212521
-
Role of HuD and other RNA-binding proteins in neural development and plasticity
-
Perrone-Bizzozero, N. & Bolognani, F. Role of HuD and other RNA-binding proteins in neural development and plasticity. J. Neurosci. Res. 68, 121-126 (2002).
-
(2002)
J. Neurosci. Res.
, vol.68
, pp. 121-126
-
-
Perrone-Bizzozero, N.1
Bolognani, F.2
-
126
-
-
33845380816
-
A nuclear function of Hu proteins as neuron-specific alternative RNA processing regulators
-
Zhu, H., Hasman, R. A., Barron, V. A., Luo, G. & Lou, H. A nuclear function of Hu proteins as neuron-specific alternative RNA processing regulators. Mol. Biol. Cell 17, 5105-5114 (2006).
-
(2006)
Mol. Biol. Cell
, vol.17
, pp. 5105-5114
-
-
Zhu, H.1
Hasman, R.A.2
Barron, V.A.3
Luo, G.4
Lou, H.5
-
127
-
-
45249093014
-
Regulation of the ELAV target ewg: Insights from an evolutionary perspective
-
Soller, M., Li, M. & Haussmann, I. U. Regulation of the ELAV target ewg: insights from an evolutionary perspective. Biochem. Soc. Trans. 36, 502-504 (2008).
-
(2008)
Biochem. Soc. Trans.
, vol.36
, pp. 502-504
-
-
Soller, M.1
Li, M.2
Haussmann, I.U.3
-
128
-
-
24344452361
-
A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain
-
McKee, A. E. et al. A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev. Biol. 5, 14 (2005).
-
(2005)
BMC Dev. Biol.
, vol.5
, pp. 14
-
-
McKee, A.E.1
-
129
-
-
13144293035
-
The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen targeted in POMA patients with dementia
-
Yang, Y. Y., Yin, G. L. & Darnell, R. B. The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen targeted in POMA patients with dementia. Proc. Natl Acad. Sci. USA 95, 13254-13259 (1998).
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 13254-13259
-
-
Yang, Y.Y.1
Yin, G.L.2
Darnell, R.B.3
-
130
-
-
61649087689
-
ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing
-
Warzecha, C. C., Sato, T. K., Nabet, B., Hogenesch, J. B. & Carstens, R. P. ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing. Mol. Cell 33, 591-601 (2009).
-
(2009)
Mol. Cell
, vol.33
, pp. 591-601
-
-
Warzecha, C.C.1
Sato, T.K.2
Nabet, B.3
Hogenesch, J.B.4
Carstens, R.P.5
-
131
-
-
12144285753
-
Dilated cardiomyopathy caused by tissue-specific ablation of SC35 in the heart
-
Ding, J. H. et al. Dilated cardiomyopathy caused by tissue-specific ablation of SC35 in the heart. EMBO J. 23, 885-896 (2004).
-
(2004)
EMBO J.
, vol.23
, pp. 885-896
-
-
Ding, J.H.1
-
132
-
-
19944427655
-
ASF/SF2-regulated CaMKIIδ alternative splicing temporally reprograms excitation-contraction coupling in cardiac muscle
-
Xu, X. et al. ASF/SF2-regulated CaMKIIδ alternative splicing temporally reprograms excitation-contraction coupling in cardiac muscle. Cell 120, 59-72 (2005).
-
(2005)
Cell
, vol.120
, pp. 59-72
-
-
Xu, X.1
-
133
-
-
64549159302
-
2+ handling in the embryonic heart
-
Feng, Y. et al. SRp38 regulates alternative splicing and is required for Ca2+ handling in the embryonic heart. Dev. Cell 16, 528-538 (2009).
-
(2009)
Dev. Cell
, vol.16
, pp. 528-538
-
-
Feng, Y.1
-
134
-
-
50849145126
-
Tissue-specific splicing factor gene expression signatures
-
Grosso, A. R. et al. Tissue-specific splicing factor gene expression signatures. Nucleic Acids Res. 36, 4823-4832 (2008).
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 4823-4832
-
-
Grosso, A.R.1
-
135
-
-
33845715579
-
SAP155 binds to ceramide-responsive RNA cis-element 1 and regulates the alternative 5′ splice site selection of Bcl-x pre-mRNA
-
Massiello, A., Roesser, J. R. & Chalfant, C. E. SAP155 binds to ceramide-responsive RNA cis-element 1 and regulates the alternative 5′ splice site selection of Bcl-x pre-mRNA. FASEB J. 20, 1680-1682 (2006).
-
(2006)
FASEB J.
, vol.20
, pp. 1680-1682
-
-
Massiello, A.1
Roesser, J.R.2
Chalfant, C.E.3
-
136
-
-
33749471110
-
35 impairs cell cycle progression and modulates alternative splicing of Cdc25 transcripts
-
Pacheco, T. R., Moita, L. F., Gomes, A. Q., Hacohen, N. & Carmo-Fonseca, M. RNA interference knockdown of hU2AF35 impairs cell cycle progression and modulates alternative splicing of Cdc25 transcripts. Mol. Biol. Cell 17, 4187-4199 (2006).
-
(2006)
Mol. Biol. Cell
, vol.17
, pp. 4187-4199
-
-
Pacheco, T.R.1
Moita, L.F.2
Gomes, A.Q.3
Hacohen, N.4
Carmo-Fonseca, M.5
-
137
-
-
34748855702
-
Rapid transcript-specific changes in splicing in response to environmental stress
-
Pleiss, J. A., Whitworth, G. B., Bergkessel, M. & Guthrie, C. Rapid, transcript-specific changes in splicing in response to environmental stress. Mol. Cell 27, 928-937 (2007).
-
(2007)
Mol. Cell
, vol.27
, pp. 928-937
-
-
Pleiss, J.A.1
Whitworth, G.B.2
Bergkessel, M.3
Guthrie, C.4
-
138
-
-
29144463310
-
Spinal muscular atrophy: A deficiency in a ubiquitous protein; A motor neuron-specific disease
-
Monani, U. R. Spinal muscular atrophy: a deficiency in a ubiquitous protein; a motor neuron-specific disease. Neuron 48, 885-896 (2005).
-
(2005)
Neuron
, vol.48
, pp. 885-896
-
-
Monani, U.R.1
-
139
-
-
41549119007
-
Ribonucleoprotein assembly defects correlate with spinal muscular atrophy severity and preferentially affect a subset of spliceosomal snRNPs
-
Gabanella, F. et al. Ribonucleoprotein assembly defects correlate with spinal muscular atrophy severity and preferentially affect a subset of spliceosomal snRNPs. PLoS ONE 2, e921 (2007).
-
(2007)
PLoS ONE
, vol.2
-
-
Gabanella, F.1
-
140
-
-
4444272979
-
Cell signalling and the control of pre-mRNA splicing
-
Shin, C. & Manley, J. L. Cell signalling and the control of pre-mRNA splicing. Nature Rev. Mol. Cell Biol. 5, 727-738 (2004).
-
(2004)
Nature Rev. Mol. Cell Biol.
, vol.5
, pp. 727-738
-
-
Shin, C.1
Manley, J.L.2
-
141
-
-
34447297332
-
Cellular signals modulate alternative splicing
-
Tarn, W. Y. Cellular signals modulate alternative splicing. J. Biomed. Sci. 14, 517-522 (2007).
-
(2007)
J. Biomed. Sci.
, vol.14
, pp. 517-522
-
-
Tarn, W.Y.1
-
142
-
-
3042836378
-
A molecular link between SR protein dephosphorylation and mRNA export
-
Huang, Y., Yario, T. A. & Steitz, J. A. A molecular link between SR protein dephosphorylation and mRNA export. Proc. Natl Acad. Sci. USA 101, 9666-9670 (2004).
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 9666-9670
-
-
Huang, Y.1
Yario, T.A.2
Steitz, J.A.3
-
143
-
-
0007570010
-
The MKK(3/6)-p38-signaling cascade alters the subcellular distribution of hnRNP A1 and modulates alternative splicing regulation
-
van der Houven van Oordt, W. et al. The MKK(3/6)-p38-signaling cascade alters the subcellular distribution of hnRNP A1 and modulates alternative splicing regulation. J. Cell Biol. 149, 307-316 (2000).
-
(2000)
J. Cell Biol.
, vol.149
, pp. 307-316
-
-
Van Der Houven1
Van Oordt, W.2
-
144
-
-
0035095885
-
ERK phosphorylation drives cytoplasmic accumulation of hnRNP-K and inhibition of mRNA translation
-
Habelhah, H. et al. ERK phosphorylation drives cytoplasmic accumulation of hnRNP-K and inhibition of mRNA translation. Nature Cell Biol. 3, 325-330 (2001).
-
(2001)
Nature Cell Biol.
, vol.3
, pp. 325-330
-
-
Habelhah, H.1
-
145
-
-
0037101633
-
Ischemia induces a translocation of the splicing factor tra2-beta 1 and changes alternative splicing patterns in the brain
-
Daoud, R. et al. Ischemia induces a translocation of the splicing factor tra2-beta 1 and changes alternative splicing patterns in the brain. J. Neurosci. 22, 5889-5899 (2002).
-
(2002)
J. Neurosci.
, vol.22
, pp. 5889-5899
-
-
Daoud, R.1
-
146
-
-
33746516731
-
F. hnRNP A1 relocalization to the stress granules reflects a role in the stress response
-
Guil, S., Long, J. C. & Caceres, J. F. hnRNP A1 relocalization to the stress granules reflects a role in the stress response. Mol. Cell. Biol. 26, 5744-5758 (2006).
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 5744-5758
-
-
Guil, S.1
Long, J.C.2
Caceres, J.3
-
147
-
-
33846268431
-
Phosphorylation by SR kinases regulates the binding of PTB-associated splicing factor (PSF) to the pre-mRNA polypyrimidine tract
-
Huang, C. J., Tang, Z., Lin, R. J. & Tucker, P. W. Phosphorylation by SR kinases regulates the binding of PTB-associated splicing factor (PSF) to the pre-mRNA polypyrimidine tract. FEBS Lett. 581, 223-232 (2007).
-
(2007)
FEBS Lett.
, vol.581
, pp. 223-232
-
-
Huang, C.J.1
Tang, Z.2
Lin, R.J.3
Tucker, P.W.4
-
148
-
-
0031037690
-
Sequence-specific RNA binding by an SR protein requires RS domain phosphorylation: Creation of an SRp40-specific splicing enhancer
-
Tacke, R., Chen, Y. & Manley, J. L. Sequence-specific RNA binding by an SR protein requires RS domain phosphorylation: creation of an SRp40-specific splicing enhancer. Proc. Natl Acad. Sci. USA 94, 1148-1153 (1997).
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 1148-1153
-
-
Tacke, R.1
Chen, Y.2
Manley, J.L.3
-
149
-
-
33847308702
-
Fas-activated serine/ threonine kinase (FAST K) synergizes with TIA-1/TIAR proteins to regulate Fas alternative splicing
-
Izquierdo, J. M. & Valcarcel, J. Fas-activated serine/ threonine kinase (FAST K) synergizes with TIA-1/TIAR proteins to regulate Fas alternative splicing. J. Biol. Chem. 282, 1539-1543 (2007).
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 1539-1543
-
-
Izquierdo, J.M.1
Valcarcel, J.2
-
150
-
-
33947712084
-
The RNA-binding protein Sam68 odulates the alternative splicing of Bcl-x
-
Paronetto, M. P., Achsel, T., Massiello, A., Chalfant, C. E. & Sette, C. The RNA-binding protein Sam68 odulates the alternative splicing of Bcl-x. J. Cell Biol. 176, 929-939 (2007).
-
(2007)
J. Cell Biol.
, vol.176
, pp. 929-939
-
-
Paronetto, M.P.1
Achsel, T.2
Massiello, A.3
Chalfant, C.E.4
Sette, C.5
-
151
-
-
34249654182
-
Relocalization of the polypyrimidine tract-binding protein during PKA-induced neurite growth
-
Ma, S., Liu, G., Sun, Y. & Xie, J. Relocalization of the polypyrimidine tract-binding protein during PKA-induced neurite growth. Biochim. Biophys. Acta 1773, 912-923 (2007).
-
(2007)
Biochim. Biophys. Acta
, vol.1773
, pp. 912-923
-
-
Ma, S.1
Liu, G.2
Sun, Y.3
Xie, J.4
-
152
-
-
0041806593
-
Protein kinase A phosphorylation modulates transport of the polypyrimidine tract-binding protein
-
Xie, J., Lee, J. A., Kress, T. L., Mowry, K. L. & Black, D. L. Protein kinase A phosphorylation modulates transport of the polypyrimidine tract-binding protein. Proc. Natl Acad. Sci. USA 100, 8776-8781 (2003).
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 8776-8781
-
-
Xie, J.1
Lee, J.A.2
Kress, T.L.3
Mowry, K.L.4
Black, D.L.5
-
153
-
-
34948892099
-
A complex signaling pathway regulates SRp38 phosphorylation and pre-mRNA splicing in response to heat shock
-
Shi, Y. & Manley, J. L. A complex signaling pathway regulates SRp38 phosphorylation and pre-mRNA splicing in response to heat shock. Mol. Cell 28, 79-90 (2007).
-
(2007)
Mol. Cell
, vol.28
, pp. 79-90
-
-
Shi, Y.1
Manley, J.L.2
-
154
-
-
0028825490
-
Molecular cloning of NIPP-1, a nuclear inhibitor of protein phosphatase-1, reveals homology with polypeptides involved in RNA processing
-
Van Eynde, A. et al. Molecular cloning of NIPP-1, a nuclear inhibitor of protein phosphatase-1, reveals homology with polypeptides involved in RNA processing. J. Biol. Chem. 270, 28068-28074 (1995).
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 28068-28074
-
-
Van Eynde, A.1
-
155
-
-
0037081563
-
Protein phosphatase 1 targeted in many directions
-
Cohen, P. T. Protein phosphatase 1 targeted in many directions. J. Cell Sci. 11 5, 241-256 (2002).
-
(2002)
J. Cell Sci.
, vol.11
, Issue.5
, pp. 241-256
-
-
Cohen, P.T.1
-
156
-
-
38049061206
-
Alternative splicing: Current perspectives
-
Kim, E., Goren, A. & Ast, G. Alternative splicing: current perspectives. Bioessays 30, 38-47 (2008).
-
(2008)
Bioessays
, vol.30
, pp. 38-47
-
-
Kim, E.1
Goren, A.2
Ast, G.3
-
157
-
-
30344439849
-
Genome-wide prediction of mammalian enhancers based on analysis of transcription-factor binding affinity
-
Hallikas, O. et al. Genome-wide prediction of mammalian enhancers based on analysis of transcription-factor binding affinity. Cell 124, 47-59 (2006).
-
(2006)
Cell
, vol.124
, pp. 47-59
-
-
Hallikas, O.1
-
158
-
-
2942606066
-
Structure and evolution of transcriptional regulatory networks
-
Babu, M. M., Luscombe, N. M., Aravind, L., Gerstein, M. & Teichmann, S. A. Structure and evolution of transcriptional regulatory networks. Curr. Opin. Struct. Biol. 14, 283-291 (2004).
-
(2004)
Curr. Opin. Struct. Biol.
, vol.14
, pp. 283-291
-
-
Babu, M.M.1
Luscombe, N.M.2
Aravind, L.3
Gerstein, M.4
Teichmann, S.A.5
-
159
-
-
0029064220
-
The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities
-
Tacke, R. & Manley, J. L. The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities. EMBO J. 14, 3540-3551 (1995).
-
(1995)
EMBO J.
, vol.14
, pp. 3540-3551
-
-
Tacke, R.1
Manley, J.L.2
-
160
-
-
11144331491
-
Characterization of a U2AF-independent commitment complex (E′) in the mammalian spliceosome assembly pathway
-
Kent, O. A., Ritchie, D. B. & Macmillan, A. M. Characterization of a U2AF-independent commitment complex (E′) in the mammalian spliceosome assembly pathway. Mol. Cell. Biol. 25, 233-240 (2005).
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 233-240
-
-
Kent, O.A.1
Ritchie, D.B.2
MacMillan, A.M.3
-
161
-
-
33745609509
-
RS domains contact splicing signals and promote splicing by a common mechanism in yeast through humans
-
Shen, H. & Green, M. R. RS domains contact splicing signals and promote splicing by a common mechanism in yeast through humans. Genes Dev. 20, 1755-1765 (2006).
-
(2006)
Genes Dev.
, vol.20
, pp. 1755-1765
-
-
Shen, H.1
Green, M.R.2
-
162
-
-
0344211508
-
SR splicing factors serve as adapter proteins for TAP-dependent mRNA export
-
Huang, Y., Gattoni, R., Stevenin, J. & Steitz, J. A. SR splicing factors serve as adapter proteins for TAP-dependent mRNA export. Mol. Cell 11, 837-843 (2003).
-
(2003)
Mol. Cell
, vol.11
, pp. 837-843
-
-
Huang, Y.1
Gattoni, R.2
Stevenin, J.3
Steitz, J.A.4
-
163
-
-
8844219677
-
Involvement of SR proteins in mRNA surveillance
-
Zhang, Z. & Krainer, A. R. Involvement of SR proteins in mRNA surveillance. Mol. Cell 16, 597-607 (2004).
-
(2004)
Mol. Cell
, vol.16
, pp. 597-607
-
-
Zhang, Z.1
Krainer, A.R.2
-
164
-
-
1842632326
-
A novel role for shuttling SR proteins in mRNA translation
-
Sanford, J. R., Gray, N. K., Beckmann, K. & Caceres, J. F. A novel role for shuttling SR proteins in mRNA translation. Genes Dev. 18, 755-768 (2004).
-
(2004)
Genes Dev.
, vol.18
, pp. 755-768
-
-
Sanford, J.R.1
Gray, N.K.2
Beckmann, K.3
Caceres, J.F.4
-
165
-
-
0036544654
-
Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1
-
Cartegni, L. & Krainer, A. R. Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1. Nature Genet. 30, 377-384 (2002).
-
(2002)
Nature Genet.
, vol.30
, pp. 377-384
-
-
Cartegni, L.1
Krainer, A.R.2
-
166
-
-
29244490598
-
Determinants of exon 7 splicing in the spinal muscular atrophy genes
-
Cartegni, L., Hastings, M. L., Calarco, J. A., de Stanchina, E. & Krainer, A. R. Determinants of exon 7 splicing in the spinal muscular atrophy genes, SMN1 and SMN2. Am. J. Hum. Genet. 78, 63-77 (2006).
-
(2006)
SMN1 and SMN2. Am. J. Hum. Genet.
, vol.78
, pp. 63-77
-
-
Cartegni, L.1
Hastings, M.L.2
Calarco, J.A.3
De Stanchina, E.4
Krainer, A.R.5
|