Molecular dynamics simulations of G-DNA and perspectives on the simulation of nucleic acid structures

Methods

Volumn 57, Issue 1, 2012, Pages 25-39

  Šponer, Jiří ^a,b   Cang, Xiaohui ^c   Cheatham, Thomas E ^d  

^a INSTITUTE OF BIOPHYSICS   (Czech Republic)

^b MASARYK UNIVERSITY   (Czech Republic)

^c SHANGHAI INSTITUTE OF MATERIA MEDICA   (China)

^d UNIVERSITY OF UTAH   (United States)

Author keywords

DNA ligand binding; Force field development; Force field limitations; Guanine quadruplex; Molecular dynamics simulations

Indexed keywords

DNA; GUANINE; ION; RNA;

ENTROPY; MOLECULAR DYNAMICS; NUCLEAR MAGNETIC RESONANCE; NUCLEIC ACID STRUCTURE; PRIORITY JOURNAL; PROTEIN DEGRADATION; REVIEW; SIMULATION; TELOMERE;

DNA; G-QUADRUPLEXES; GUANINE; HYDROGEN BONDING; LIGANDS; MOLECULAR DYNAMICS SIMULATION; NUCLEIC ACID CONFORMATION; RNA; SOLVENTS; TELOMERE;

EID: 84865084480     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2012.04.005     Document Type: Review

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