메뉴 건너뛰기




Volumn 49, Issue 2, 2006, Pages 582-599

Trisubstituted acridines as G-quadruplex telomere targeting agents. Effects of extensions of the 3,6- and 9-side chains on quadruplex binding, telomerase activity, and cell proliferation

Author keywords

[No Author keywords available]

Indexed keywords

3,6 [4 (PYRROLIDIN 1 YL)BUTANAMIDO] 9 [4' (N,N DIMETHYLAMINO)ANILINO]ACRIDINE; 3,6 BIS[3 (PYRROLIDIN 1 YL)PROPIONAMIDO] 9 [4' [2'' (PYRROLIDIN 1YL)ACETAMIDO]ANILINO]ACRIDINE; 3,6 BIS[3 (PYRROLIDIN 1 YL)PROPIONAMIDO] 9 [4' [3'' (PYRROLIDIN 1 YL)BUTANAMIDO]ANILINO]ACRIDINE; 3,6 BIS[3 (PYRROLIDIN 1 YL)PROPIONAMIDO] 9 [4' [3'' (PYRROLIDIN 1 YL)PROPANAMIDO]ANILINO]ACRIDINE; 3,6 BIS[4 (PYRROLIDIN 1 YL)BUTANAMIDO] 9 [4' [3'' (PYRROLIDIN 1 YL)PROPANAMIDO]ANILINO]ACRIDINE; 3,6 BIS[4 (PYRROLIDIN 1 YL)HEXANAMIDO] 9 [4' [3'' (PYRROLIDIN 1YL)PROPANAMIDO]ANILINO]ACRIDINE; 3,6 BIS[5 (PYRROLIDIN 1 YL)HEXANAMIDO] 9 [4' (N,N DIMETHYLAMINO)ANILINO]ACRIDINE; 3,6 BIS[5 (PYRROLIDIN 1 YL)PENTANAMIDO] 9 [4' (N,N DIMETHYLAMINO)ANILINO]ACRIDINE; 3,6 BIS[5 (PYRROLIDIN 1 YL)PENTANAMIDO] 9 [4' [3'' (PYRROLIDIN 1 YL)PROPANAMIDO]ANILINO]ACRIDINE; ACRIDINE DERIVATIVE; G QUADRUPLEX TELOMERE TARGETING AGENT; TELOMERASE; UNCLASSIFIED DRUG;

EID: 31544446381     PISSN: 00222623     EISSN: None     Source Type: Journal    
DOI: 10.1021/jm050555a     Document Type: Article
Times cited : (193)

References (99)
  • 1
    • 0034597794 scopus 로고    scopus 로고
    • Telomere states and cell fates
    • Blackburn, E. H. Telomere states and cell fates. Nature 2000, 480, 53-56.
    • (2000) Nature , vol.480 , pp. 53-56
    • Blackburn, E.H.1
  • 2
    • 0035929353 scopus 로고    scopus 로고
    • Switching and signaling at the telomere
    • Blackburn, B. H. Switching and signaling at the telomere. Cell 2001, 106, 661-673.
    • (2001) Cell , vol.106 , pp. 661-673
    • Blackburn, B.H.1
  • 3
    • 0037192462 scopus 로고    scopus 로고
    • Senescence induced by altered telomere state, not telomere loss
    • Karlseder, J.; Smogorzewska, A.; de Lange, T. Senescence induced by altered telomere state, not telomere loss. Science 2002, 295, 2446-2449.
    • (2002) Science , vol.295 , pp. 2446-2449
    • Karlseder, J.1    Smogorzewska, A.2    De Lange, T.3
  • 4
    • 10944240539 scopus 로고    scopus 로고
    • Telosome - A mammalian telomere associated complex formed by multiple telomeric proteins
    • Liu, D.; O'Connor, M. S.; Qin, J.; Songyang, Z. Telosome-A mammalian telomere associated complex formed by multiple telomeric proteins. J. Biol. Chem. 2004, 270, 51338-51342.
    • (2004) J. Biol. Chem. , vol.270 , pp. 51338-51342
    • Liu, D.1    O'Connor, M.S.2    Qin, J.3    Songyang, Z.4
  • 5
    • 2042429168 scopus 로고    scopus 로고
    • Regulation of telomerase by telomeric proteins
    • (a) Smogorzewska, A.; de Lange, T. Regulation of telomerase by telomeric proteins. Annu. Rev. Biochem. 2004, 73, 177-208.
    • (2004) Annu. Rev. Biochem. , vol.73 , pp. 177-208
    • Smogorzewska, A.1    De Lange, T.2
  • 6
    • 24944460598 scopus 로고    scopus 로고
    • Shelterin: The protein complex that shapes and safeguards human telomeres
    • (b) de Lange, T. Shelterin: The protein complex that shapes and safeguards human telomeres. Genes Dev. 2005, 19, 2100-2110.
    • (2005) Genes Dev. , vol.19 , pp. 2100-2110
    • De Lange, T.1
  • 7
    • 0037457987 scopus 로고    scopus 로고
    • Evidence that exposure of the telomere 3′ overhang sequence induces senescence
    • Li, G. Z.; Eller, M. S.; Firoozubadi, R.; Gilchrest, B. A. Evidence that exposure of the telomere 3′ overhang sequence induces senescence. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 527-531.
    • (2003) Proc. Natl. Acad. Sci. U.S.A. , vol.100 , pp. 527-531
    • Li, G.Z.1    Eller, M.S.2    Firoozubadi, R.3    Gilchrest, B.A.4
  • 9
    • 0034647836 scopus 로고    scopus 로고
    • Transient expression of human telomerase extends the life span of normal human fibroblasts
    • Steinert, S.; Shay, J. W.; Wright, W. E. Transient expression of human telomerase extends the life span of normal human fibroblasts. Biochem. Biophys. Res. Commun. 2000, 273, 1095-1098.
    • (2000) Biochem. Biophys. Res. Commun. , vol.273 , pp. 1095-1098
    • Steinert, S.1    Shay, J.W.2    Wright, W.E.3
  • 10
    • 0026523228 scopus 로고
    • Telomere shortening associated with chromosome instability is arrested in immortal cells which express telomerase activity
    • Counter, C. M.; Avilion, A. A.; LeFeuvre, C. E.; Stewart, N. G.; Greider, C. W.; Harley, C. B.; Bacchetti, S. Telomere shortening associated with chromosome instability is arrested in immortal cells which express telomerase activity. EMBO J. 1992, 11, 1921-1929.
    • (1992) EMBO J. , vol.11 , pp. 1921-1929
    • Counter, C.M.1    Avilion, A.A.2    LeFeuvre, C.E.3    Stewart, N.G.4    Greider, C.W.5    Harley, C.B.6    Bacchetti, S.7
  • 11
    • 0035812845 scopus 로고    scopus 로고
    • The shortest telomere, not average telomere length, is critical for cell viability und chromosome stability
    • Hemann, M. T.; Strong, M. A.; Hao, L. Y.; Greider, C. W. The shortest telomere, not average telomere length, is critical for cell viability und chromosome stability. Cell 2001, 107, 67-77.
    • (2001) Cell , vol.107 , pp. 67-77
    • Hemann, M.T.1    Strong, M.A.2    Hao, L.Y.3    Greider, C.W.4
  • 15
    • 0031010342 scopus 로고    scopus 로고
    • A survey of telomerase activity in human cancer
    • Shay, J. W.; Bacchetti, S. A survey of telomerase activity in human cancer. Eur. J Cancer 1997, 33, 787-791.
    • (1997) Eur. J. Cancer , vol.33 , pp. 787-791
    • Shay, J.W.1    Bacchetti, S.2
  • 17
    • 0036562687 scopus 로고    scopus 로고
    • Telomere maintenance as a target for anticancer drug discovery
    • Neidle, S.; Parkinson, G. Telomere maintenance as a target for anticancer drug discovery. Nat. Rev. Drug Discovery 2002, 1, 383-393.
    • (2002) Nat. Rev. Drug Discovery , vol.1 , pp. 383-393
    • Neidle, S.1    Parkinson, G.2
  • 19
    • 0037142071 scopus 로고    scopus 로고
    • Crystal structure of parallel quadruplexes from human telomeric DNA
    • Parkinson, G. N.; Lee, M. P.; Neidle, S. Crystal structure of parallel quadruplexes from human telomeric DNA. Nature 2002, 417, 876-880.
    • (2002) Nature , vol.417 , pp. 876-880
    • Parkinson, G.N.1    Lee, M.P.2    Neidle, S.3
  • 22
    • 0034760505 scopus 로고    scopus 로고
    • Potent inhibition of telomerase by small-molecule pentacyclic neridines capable of interacting with G-quadruplexes
    • Gowan, S. M.; Heald, R.; Stevens, M. F.; Kelland, L. R. Potent inhibition of telomerase by small-molecule pentacyclic neridines capable of interacting with G-quadruplexes. Mol. Pharm. 2001, 60, 981-988.
    • (2001) Mol. Pharm. , vol.60 , pp. 981-988
    • Gowan, S.M.1    Heald, R.2    Stevens, M.F.3    Kelland, L.R.4
  • 24
    • 0037070575 scopus 로고    scopus 로고
    • Telomestatin, a potent telomerase inhibitor that interacts quite specifically with the human telomeric intramolecular G-quadruplex
    • Kim, M. Y.; Vankayulapati, H.; Shin-Ya, K.; Wierzba, K.; Hurley, L. H. Telomestatin, a potent telomerase inhibitor that interacts quite specifically with the human telomeric intramolecular G-quadruplex. J. Am. Chem. Soc. 2002, 124, 2098-2099.
    • (2002) J. Am. Chem. Soc. , vol.124 , pp. 2098-2099
    • Kim, M.Y.1    Vankayulapati, H.2    Shin-Ya, K.3    Wierzba, K.4    Hurley, L.H.5
  • 25
    • 0036241599 scopus 로고    scopus 로고
    • A G-quadruplex-interactive potent small-molecule inhibitor of telomerase exhibiting in vitro and in vivo antitumor activity
    • Gowan, S. M.; Harrison, R. J.; Patterson, L.; Valenti, M.; Read, M. A.; Neidle, S.; Kelland, L. R. A G-quadruplex-interactive potent small-molecule inhibitor of telomerase exhibiting in vitro and in vivo antitumor activity. Mol. Pharm. 2002, 61, 1154-1162.
    • (2002) Mol. Pharm. , vol.61 , pp. 1154-1162
    • Gowan, S.M.1    Harrison, R.J.2    Patterson, L.3    Valenti, M.4    Read, M.A.5    Neidle, S.6    Kelland, L.R.7
  • 26
    • 6944239985 scopus 로고    scopus 로고
    • Biological Activity of the G-quadruplex ligand RHPS4 (3,11-diflouro-6,8, 13-trimethyl-8H-quino[4,3,2-kl] acridinium methosulfate) is associated with telomere capping alteration
    • (a) Leonetti, C.; Amodei, S.; D'Angelo, C.; Rizzo, A.; Benassi, B.; Antonelli, A.; Elli, R.; Stevens, M. F. G.; D'Inealci, M.; Zupi, G.; Birocecio, A. Biological Activity of the G-quadruplex ligand RHPS4 (3,11-diflouro-6,8,13- trimethyl-8H-quino[4,3,2-kl] acridinium methosulfate) is associated with telomere capping alteration. Mol. Pharm. 2004, 66, 1138-1146.
    • (2004) Mol. Pharm. , vol.66 , pp. 1138-1146
    • Leonetti, C.1    Amodei, S.2    D'Angelo, C.3    Rizzo, A.4    Benassi, B.5    Antonelli, A.6    Elli, R.7    Stevens, M.F.G.8    D'Inealci, M.9    Zupi, G.10    Birocecio, A.11
  • 28
    • 20944447769 scopus 로고    scopus 로고
    • Apoptosis related to telomere instability and cell cycle alterations in human giolma cells treated by new highly selective G-quadruplex ligands
    • (c) Pennarun, G.; Granotier, C.; Gauthier, L. R.; Gomez, D.; Hoffschir, F.; Mandine, E.; Riou, J.-F.; Mergny, J.-L.; Mailliet, P.; Boussin, F. Apoptosis related to telomere instability and cell cycle alterations in human giolma cells treated by new highly selective G-quadruplex ligands. Oncogene 2005, 24, 2917-2928.
    • (2005) Oncogene , vol.24 , pp. 2917-2928
    • Pennarun, G.1    Granotier, C.2    Gauthier, L.R.3    Gomez, D.4    Hoffschir, F.5    Mandine, E.6    Riou, J.-F.7    Mergny, J.-L.8    Mailliet, P.9    Boussin, F.10
  • 30
    • 12844265975 scopus 로고    scopus 로고
    • Structure of human POT1 bound to telomeric single-stranded DNA provides a model for chromosome end-protection
    • Lei, M.; Podell, E. R.; Cech, T. R. Structure of human POT1 bound to telomeric single-stranded DNA provides a model for chromosome end-protection. Nature Struct. Mol. Biol. 2004, 11, 1223-1229.
    • (2004) Nature Struct. Mol. Biol. , vol.11 , pp. 1223-1229
    • Lei, M.1    Podell, E.R.2    Cech, T.R.3
  • 32
    • 0035844082 scopus 로고    scopus 로고
    • Pot1, the putative telomere end-binding protein in fission yeast and humans
    • (a) Baumann, P.; Cech, T. R. Pot1, the putative telomere end-binding protein in fission yeast and humans. Science 2001, 292, 1171-1175.
    • (2001) Science , vol.292 , pp. 1171-1175
    • Baumann, P.1    Cech, T.R.2
  • 33
    • 23344451160 scopus 로고    scopus 로고
    • Minium POT1 disrupts telomeric G-quadruplexes allowing telomerase extension in vitro
    • (b) Zaug, A. J.; Podell, E. R.; Cech, T. R. Minium POT1 disrupts telomeric G-quadruplexes allowing telomerase extension in vitro. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 10864-10869.
    • (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 10864-10869
    • Zaug, A.J.1    Podell, E.R.2    Cech, T.R.3
  • 35
    • 7444237059 scopus 로고    scopus 로고
    • A G-quadruplex telomere targeting agent produces p16-associated senescence and chromosomal fusions in human prostate cancer cells
    • Incles, C. M.; Schultes, C. M.; Kempski, H.; Kochler, H.; Kelland, L. R.; Neidle, S. A G-quadruplex telomere targeting agent produces p16-associated senescence and chromosomal fusions in human prostate cancer cells. Mol. Cancer Ther. 2004, 3, 1201-1206.
    • (2004) Mol. Cancer Ther. , vol.3 , pp. 1201-1206
    • Incles, C.M.1    Schultes, C.M.2    Kempski, H.3    Kochler, H.4    Kelland, L.R.5    Neidle, S.6
  • 36
    • 0032538453 scopus 로고    scopus 로고
    • The Bloom's syndrome helicase unwinds G4 DNA
    • Sun, H.; Karow, J. K.; Hickson, I. D.; Maizels, N. The Bloom's syndrome helicase unwinds G4 DNA. J. Biol. Chem. 1998, 273, 27587-27592.
    • (1998) J. Biol. Chem. , vol.273 , pp. 27587-27592
    • Sun, H.1    Karow, J.K.2    Hickson, I.D.3    Maizels, N.4
  • 37
    • 0037175018 scopus 로고    scopus 로고
    • Telomere-binding protein TRF2 binds to and stimulates the Werner and Bloom syndrome helicases
    • Opresko, P. L.; Von Kobbe, C.; Laine, J. P.; Harrigan, J.; Hickson, I. D.; Bohr, V. A. Telomere-binding protein TRF2 binds to and stimulates the Werner and Bloom syndrome helicases. J. Biol. Chem. 2002, 277, 41110-41119.
    • (2002) J. Biol. Chem. , vol.277 , pp. 41110-41119
    • Opresko, P.L.1    Von Kobbe, C.2    Laine, J.P.3    Harrigan, J.4    Hickson, I.D.5    Bohr, V.A.6
  • 38
    • 0035909817 scopus 로고    scopus 로고
    • Inhibition of the Bloom's and Werner's syndrome helicases by G-quadruplex interacting ligands
    • Li, J. L.; Harrison, R. J.; Reszka, A. P.; Brosh, R. M., Jr.; Bohr, V. A.; Neidle, S.; Hickson, I. D. Inhibition of the Bloom's and Werner's syndrome helicases by G-quadruplex interacting ligands. Biochemistry 2001, 40, 15194-15202.
    • (2001) Biochemistry , vol.40 , pp. 15194-15202
    • Li, J.L.1    Harrison, R.J.2    Reszka, A.P.3    Brosh Jr., R.M.4    Bohr, V.A.5    Neidle, S.6    Hickson, I.D.7
  • 39
    • 13944272246 scopus 로고    scopus 로고
    • The G-quadruplex-interactive molecule BRACO-19 inhibits tumor growth, consistent with telomere targeting and interference with telomerase function
    • Burger, A. M.; Dai, F.; Schultes, C. M.; Reszka, A. P.; Moore, M. J.; Double, J. A.; Neidle, S. The G-quadruplex-interactive molecule BRACO-19 inhibits tumor growth, consistent with telomere targeting and interference with telomerase function. Cancer Res. 2005, 65, 1489-1496.
    • (2005) Cancer Res. , vol.65 , pp. 1489-1496
    • Burger, A.M.1    Dai, F.2    Schultes, C.M.3    Reszka, A.P.4    Moore, M.J.5    Double, J.A.6    Neidle, S.7
  • 40
    • 0037289331 scopus 로고    scopus 로고
    • Telomerase inhibitors: A new option for chemotherapy
    • Chen, Z.; Corey, D. R. Telomerase inhibitors: A new option for chemotherapy. Adv. Cancer Res. 2003, 87, 31-58.
    • (2003) Adv. Cancer Res. , vol.87 , pp. 31-58
    • Chen, Z.1    Corey, D.R.2
  • 41
    • 0036782884 scopus 로고    scopus 로고
    • Telomerase: A target for cancer therapeutics
    • Shay, J. W.; Wright, W. E. Telomerase: A target for cancer therapeutics. Cancer Cell 2002, 2, 257-265.
    • (2002) Cancer Cell , vol.2 , pp. 257-265
    • Shay, J.W.1    Wright, W.E.2
  • 43
    • 18044391665 scopus 로고    scopus 로고
    • Overcoming the immortality of tumour cells by telomere and telomerase based cancer therapeutics - Current status and future prospects
    • (b) Kelland, L. R. Overcoming the immortality of tumour cells by telomere and telomerase based cancer therapeutics-Current status and future prospects. Eur. J. Cancer 2005, 41, 971-979.
    • (2005) Eur. J. Cancer , vol.41 , pp. 971-979
    • Kelland, L.R.1
  • 45
    • 3142748255 scopus 로고    scopus 로고
    • Synthesis, biophysical and biological evaluation of 3,6-bis- amidoacridines with extended 9-anilino substituents as potent G-qundruplex-binding telomerase inhibitors
    • Schultes, C. M.; Guyen, B.; Cuesta, J.; Neidle, S. Synthesis, biophysical and biological evaluation of 3,6-bis-amidoacridines with extended 9-anilino substituents as potent G-qundruplex-binding telomerase inhibitors. Bioorg. Med. Chem. Lett. 2004, 14, 4347-4351.
    • (2004) Bioorg. Med. Chem. Lett. , vol.14 , pp. 4347-4351
    • Schultes, C.M.1    Guyen, B.2    Cuesta, J.3    Neidle, S.4
  • 47
    • 7044267399 scopus 로고
    • The synthesis of certain acridine compounds
    • Matsumura, K. The synthesis of certain acridine compounds. J. Am. Chem. Soc. 1929, 51, 816-820.
    • (1929) J. Am. Chem. Soc. , vol.51 , pp. 816-820
    • Matsumura, K.1
  • 48
    • 0028360131 scopus 로고
    • Synthesis and in vitro evaluation of 9-anilino-3,6-diaminoacridines active against a multidrug-resistant strain of the malaria parasite Plasmodium falciparum
    • Gamage, S. A.; Tepsiri, N.; Wilairut, P.; Wojeik, S. J.; Figgitt, D. P.; Ralph, R. K.; Denny, W. A. Synthesis and in vitro evaluation of 9-anilino-3,6-diaminoacridines active against a multidrug-resistant strain of the malaria parasite Plasmodium falciparum. J. Med. Chem. 1994, 37, 1486-1494.
    • (1994) J. Med. Chem. , vol.37 , pp. 1486-1494
    • Gamage, S.A.1    Tepsiri, N.2    Wilairut, P.3    Wojeik, S.J.4    Figgitt, D.P.5    Ralph, R.K.6    Denny, W.A.7
  • 49
    • 0040164390 scopus 로고    scopus 로고
    • Nanosecond molecular dynamics simulations of parallel and antiparallel guanine quadruplex DNA molecules
    • Spackova, N.; Berger, I.; Sponer, J. Nanosecond molecular dynamics simulations of parallel and antiparallel guanine quadruplex DNA molecules. J. Am. Chem. Soc. 1999, 121, 5519-5534.
    • (1999) J. Am. Chem. Soc. , vol.121 , pp. 5519-5534
    • Spackova, N.1    Berger, I.2    Sponer, J.3
  • 50
    • 0034836422 scopus 로고    scopus 로고
    • Structural dynamics and cation interactions of DNA quadruplex molecules containing mixed guanine/cytosine quartets revealed by large-scale MD simulations
    • Spackova, N.; Berger, I.; Sponer, I. Structural dynamics and cation interactions of DNA quadruplex molecules containing mixed guanine/cytosine quartets revealed by large-scale MD simulations. J. Am. Chem. Soc. 2001, 123, 3295-3307.
    • (2001) J. Am. Chem. Soc. , vol.123 , pp. 3295-3307
    • Spackova, N.1    Berger, I.2    Sponer, I.3
  • 51
    • 3042734385 scopus 로고    scopus 로고
    • Molecular dynamics simulations of guanine quadruplex loops: Advances and force field limitations
    • Fadrna, E.; Spackova, N.; Stefl, R.; Koca, I.; Cheatham, T. E.; Sponer, J. Molecular dynamics simulations of guanine quadruplex loops: Advances and force field limitations. Biophys. J. 2004, 87, 227-242.
    • (2004) Biophys. J. , vol.87 , pp. 227-242
    • Fadrna, E.1    Spackova, N.2    Stefl, R.3    Koca, I.4    Cheatham, T.E.5    Sponer, J.6
  • 55
    • 0036860225 scopus 로고    scopus 로고
    • Replicative senescence and senescence-like state induced in cancer-derived cells
    • Hwang, E. S. Replicative senescence and senescence-like state induced in cancer-derived cells. Mech. Aging Dev. 2002, 123, 1681-1694.
    • (2002) Mech. Aging Dev. , vol.123 , pp. 1681-1694
    • Hwang, E.S.1
  • 56
    • 0036815596 scopus 로고    scopus 로고
    • Tumor senescence as a determinant of drug response in vivo
    • Roninson, I. B. Tumor senescence as a determinant of drug response in vivo. Drug Resistance Updates 2002, 5, 204-208.
    • (2002) Drug Resistance Updates , vol.5 , pp. 204-208
    • Roninson, I.B.1
  • 57
    • 0035736138 scopus 로고    scopus 로고
    • If not apoptosis, then what? Treatment-induced senescence and mitotic catastrophe in tumor cells
    • Roninson, I. B.; Brande, E. V.; Chang, B. D. If not apoptosis, then what? Treatment-induced senescence and mitotic catastrophe in tumor cells. Drug Resistance Updates 2001, 4, 303-313.
    • (2001) Drug Resistance Updates , vol.4 , pp. 303-313
    • Roninson, I.B.1    Brande, E.V.2    Chang, B.D.3
  • 58
    • 2342568938 scopus 로고    scopus 로고
    • Synthesis and evaluation of analogues of 10H-indolo[3,2-b]quinoline as G-quadruplex stabilising ligands and potential inhibitors of the enzyme telomerase
    • Guyen, B.; Schultes, C. M.; Hazel, P.; Mann, J.; Neidle, S. Synthesis and evaluation of analogues of 10H-indolo[3,2-b]quinoline as G-quadruplex stabilising ligands and potential inhibitors of the enzyme telomerase. Org. Biomol. Chem. 2004, 2, 981-988.
    • (2004) Org. Biomol. Chem. , vol.2 , pp. 981-988
    • Guyen, B.1    Schultes, C.M.2    Hazel, P.3    Mann, J.4    Neidle, S.5
  • 61
    • 3042671689 scopus 로고    scopus 로고
    • Influence of loop size on the stability of intramolecular DNA quadruplexes
    • Risitano, A.; Fox, K. R. Influence of loop size on the stability of intramolecular DNA quadruplexes. Nucleic Acids Res. 2004, 32, 2598-2606.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 2598-2606
    • Risitano, A.1    Fox, K.R.2
  • 62
    • 0042823487 scopus 로고    scopus 로고
    • Formation pathways of a guanine-quadruplex DNA revealed by molecular dynamics and thermodynamic analysis of the substates
    • Stefl, R.; Cheatham, T. E.; Spackova, N.; Fadrna, E.; Berger, I.; Koca, J.; Sponer, J. Formation pathways of a guanine-quadruplex DNA revealed by molecular dynamics and thermodynamic analysis of the substates. Biophys. J. 2003, 85, 1787-1804.
    • (2003) Biophys. J. , vol.85 , pp. 1787-1804
    • Stefl, R.1    Cheatham, T.E.2    Spackova, N.3    Fadrna, E.4    Berger, I.5    Koca, J.6    Sponer, J.7
  • 63
    • 0024787884 scopus 로고
    • Monovalent cation-induced structure of telomeric DNA: The G-quartet model
    • Williamson, J. R.; Raghuraman, M. K.; Cech, T. R. Monovalent cation-induced structure of telomeric DNA: The G-quartet model. Cell 1989, 59, 871-880.
    • (1989) Cell , vol.59 , pp. 871-880
    • Williamson, J.R.1    Raghuraman, M.K.2    Cech, T.R.3
  • 64
    • 0033178271 scopus 로고    scopus 로고
    • The effect of sodium, potassium and ammonium ions on the conformation of the dimeric quadruplex formed by the Oxytricha nova telomere repeat oligonucleotide d(G(4)T(4)G(4))
    • Schultze, P.; Hud, N. V.; Smith, F. W.; Feigon, J. The effect of sodium, potassium and ammonium ions on the conformation of the dimeric quadruplex formed by the Oxytricha nova telomere repeat oligonucleotide d(G(4)T(4)G(4)). Nucleic Acids Res. 1999, 27, 3018-3028.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 3018-3028
    • Schultze, P.1    Hud, N.V.2    Smith, F.W.3    Feigon, J.4
  • 65
    • 0035905416 scopus 로고    scopus 로고
    • Recognition and stabilization of quadruplex DNA by a potent new telomerase inhibitor: NMR studies of the 2:1 complex of a pentacyclic methylacridinium cation with d(TTAGGGT)(4)
    • Gavathiotis, E.; Heald, R. A.; Stevens, M. F.; Searle, M. S. Recognition and Stabilization of quadruplex DNA by a potent new telomerase inhibitor: NMR studies of the 2:1 complex of a pentacyclic methylacridinium cation with d(TTAGGGT)(4). Angew. Chem. Int. Ed. 2001, 40, 4749-4751.
    • (2001) Angew. Chem. Int. Ed. , vol.40 , pp. 4749-4751
    • Gavathiotis, E.1    Heald, R.A.2    Stevens, M.F.3    Searle, M.S.4
  • 66
    • 0020033516 scopus 로고
    • Potential antitumor agents. 36. Quantitative relationships between experimental antitumor activity, toxicity, and structure for the general class of 9-anilinoacridine antitumor agents
    • Denny, W. A.; Cain, B. F.; Atwell, G. J.; Hansch, C.; Panthanunickal. A.; Leo, A. Potential antitumor agents. 36. Quantitative relationships between experimental antitumor activity, toxicity, and structure for the general class of 9-anilinoacridine antitumor agents. J. Mol. Chem. 1982, 25, 276-315.
    • (1982) J. Mol. Chem. , vol.25 , pp. 276-315
    • Denny, W.A.1    Cain, B.F.2    Atwell, G.J.3    Hansch, C.4    Panthanunickal, A.5    Leo, A.6
  • 67
    • 0021084473 scopus 로고
    • Potential antitumor agents. 39. Anilino ring geometry of amsacrine and derivatives: Relationship to DNA binding und antitumor activity
    • Denny, W. A.; Atwell, G. J.; Baguley, B. C. Potential antitumor agents. 39. Anilino ring geometry of amsacrine and derivatives: Relationship to DNA binding und antitumor activity. J. Med. Chem. 1983, 26, 1625-1630.
    • (1983) J. Med. Chem. , vol.26 , pp. 1625-1630
    • Denny, W.A.1    Atwell, G.J.2    Baguley, B.C.3
  • 68
    • 0031755316 scopus 로고    scopus 로고
    • Quantitative structure-activity relationships (QSAR) for 9-anilinoacridines: A comparative analysis
    • Gao, H.; Denny, W. A.; Garg, R.; Hansch, C. Quantitative structure-activity relationships (QSAR) for 9-anilinoacridines: A comparative analysis. Chemico-Biol. Interactions 1998, 116, 157-180.
    • (1998) Chemico-Biol. Interactions , vol.116 , pp. 157-180
    • Gao, H.1    Denny, W.A.2    Garg, R.3    Hansch, C.4
  • 69
    • 0037423728 scopus 로고    scopus 로고
    • Structure of a G-quadruplex-ligand complex
    • Haider, S. M.; Parkinson, G. N.; Neidle, S. Structure of a G-quadruplex-ligand complex. J. Mol. Biol. 2003, 326, 117-25.
    • (2003) J. Mol. Biol. , vol.326 , pp. 117-125
    • Haider, S.M.1    Parkinson, G.N.2    Neidle, S.3
  • 71
    • 0036431913 scopus 로고    scopus 로고
    • Cancer cell dynamics in the presence of telomerase inhibitors: Analysis of in vitro data
    • Sidorov, I. A.; Hirsch, K. S.; Harley, C. B.; Dimitrov, D. S. Cancer cell dynamics in the presence of telomerase inhibitors: Analysis of in vitro data. J. Theor. Biol. 2002, 219, 225-233.
    • (2002) J. Theor. Biol. , vol.219 , pp. 225-233
    • Sidorov, I.A.1    Hirsch, K.S.2    Harley, C.B.3    Dimitrov, D.S.4
  • 72
  • 74
    • 3342972121 scopus 로고    scopus 로고
    • Does a sentinel or a subset of short telomeres determine replicative senescence?
    • Zou, Y.; Sfeir, A.; Gryaznov, S. M.; Shay, J. W.; Wright, W. E. Does a sentinel or a subset of short telomeres determine replicative senescence? Mol. Biol. Cell 2004, 15, 3709-3718.
    • (2004) Mol. Biol. Cell , vol.15 , pp. 3709-3718
    • Zou, Y.1    Sfeir, A.2    Gryaznov, S.M.3    Shay, J.W.4    Wright, W.E.5
  • 75
    • 0037015078 scopus 로고    scopus 로고
    • Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription
    • Siddiqui-Jain, A.; Grand, C. L.; Bearss, D. J.; Hurley, L. H. Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 11593-11598.
    • (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 11593-11598
    • Siddiqui-Jain, A.1    Grand, C.L.2    Bearss, D.J.3    Hurley, L.H.4
  • 76
    • 20144364292 scopus 로고    scopus 로고
    • Prevalence of quadruplexes in the human genome
    • (a) Huppert, J.; Balasubramanian, S. Prevalence of quadruplexes in the human genome. Nucleic Acids Res. 2005, 33, 2908-2916.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 2908-2916
    • Huppert, J.1    Balasubramanian, S.2
  • 77
    • 20144369806 scopus 로고    scopus 로고
    • Highly prevalent putative quadruplex sequence motifs in human DNA
    • (b) Todd, A. K.; Johnston, M.; Neidle, S. Highly prevalent putative quadruplex sequence motifs in human DNA. Nucleic Acids Res. 2005, 33, 2901-2907.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 2901-2907
    • Todd, A.K.1    Johnston, M.2    Neidle, S.3
  • 80
    • 0030743347 scopus 로고    scopus 로고
    • Advances in quantification and characterization of telomerase activity by the telomeric repeat amplification protocol (TRAP)
    • Kim, N. W.; Wu, F. Advances in quantification and characterization of telomerase activity by the telomeric repeat amplification protocol (TRAP). Nucleic Acids Res. 1997, 25, 2595-2597.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 2595-2597
    • Kim, N.W.1    Wu, F.2
  • 81
    • 0036371902 scopus 로고    scopus 로고
    • Standard TRAP assay
    • Double, J. A., Thompson, M. J., Eds.; Humana Press Inc.: Totowa, NJ
    • Burger, A. M. Standard TRAP Assay. In Telomerase and Telomerase: Methods and Protocols; Double, J. A., Thompson, M. J., Eds.; Humana Press Inc.: Totowa, NJ, 2002; pp 109-124.
    • (2002) Telomerase and Telomerase: Methods and Protocols , pp. 109-124
    • Burger, A.M.1
  • 82
    • 0037096736 scopus 로고    scopus 로고
    • Detection of telomerase inhibitors based on G-quadruplex ligands by a modified telomeric repeat amplification protocol assay
    • Gomez, D.; Mergny, J. L.; Riou, J. F. Detection of telomerase inhibitors based on G-quadruplex ligands by a modified telomeric repeat amplification protocol assay. Cancer Res. 2002, 62, 3365-3368.
    • (2002) Cancer Res. , vol.62 , pp. 3365-3368
    • Gomez, D.1    Mergny, J.L.2    Riou, J.F.3
  • 83
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M. M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 1976, 72, 248-254.
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 84
    • 0037571112 scopus 로고    scopus 로고
    • Merck Molecular Force Field. I. Basis, form, scope, parametrization and performance of MMFF94
    • Halgren, T. A. Merck Molecular Force Field. I. Basis, form, scope, parametrization and performance of MMFF94. J. Comput. Chem. 1996, 17, 490-519.
    • (1996) J. Comput. Chem. , vol.17 , pp. 490-519
    • Halgren, T.A.1
  • 85
    • 0001242234 scopus 로고    scopus 로고
    • Merck Molecular Force Field. VII. Characterization of MMFF94, MMFF94s, and other widely available force fields for conformational energies and for intermolecular-interaction energies and geometries
    • Halgren, T. A. Merck Molecular Force Field. VII. Characterization of MMFF94, MMFF94s, and other widely available force fields for conformational energies and for intermolecular-interaction energies and geometries. J. Comput. Chem. 1999, 20, 730-748.
    • (1999) J. Comput. Chem. , vol.20 , pp. 730-748
    • Halgren, T.A.1
  • 86
    • 5544242529 scopus 로고    scopus 로고
    • Merck Molecular Force Field. VI. MMFF94s option for energy minimization studies
    • Halgren, T. A. Merck Molecular Force Field. VI. MMFF94s option for energy minimization studies. J. Comput. Chem. 1999, 20, 720-729.
    • (1999) J. Comput. Chem. , vol.20 , pp. 720-729
    • Halgren, T.A.1
  • 87
    • 33846446220 scopus 로고
    • Restart procedures for the conjugate gradient method
    • Powell, M. J. D. Restart procedures for the conjugate gradient method. Math. Programming 1977, 12, 241-254.
    • (1977) Math. Programming , vol.12 , pp. 241-254
    • Powell, M.J.D.1
  • 88
    • 0001536737 scopus 로고
    • Conformational searching methods for small molecules 2. Genetic algorithm approach
    • Judson, R. S.; Jaeger, E. P.; Treasurywala, A. M.; Peterson, M. L. Conformational searching methods for small molecules 2. Genetic algorithm approach. J. Comput. Chem. 1993, 14, 1407-1414.
    • (1993) J. Comput. Chem. , vol.14 , pp. 1407-1414
    • Judson, R.S.1    Jaeger, E.P.2    Treasurywala, A.M.3    Peterson, M.L.4
  • 89
    • 84913584731 scopus 로고
    • Analysis of the genetic algorithm method of molecular conformation determination
    • McGarrah, D. B.; Judson, R. S. Analysis of the genetic algorithm method of molecular conformation determination. J. Comput. Chem. 1993, 14, 1385-1395.
    • (1993) J. Comput. Chem. , vol.14 , pp. 1385-1395
    • McGarrah, D.B.1    Judson, R.S.2
  • 90
    • 84988115618 scopus 로고
    • Validation of the general purpose Tripos 5.2 force field
    • Clark, M.; Cramer, R. D., III.; van Opdenbosch, N. Validation of the general purpose Tripos 5.2 force field. J. Comput. Chem. 1989, 10, 982-1012.
    • (1989) J. Comput. Chem. , vol.10 , pp. 982-1012
    • Clark, M.1    Cramer III, R.D.2    Van Opdenbosch, N.3
  • 91
    • 0029633186 scopus 로고
    • AMBER, a package of computer programs for applying molecular mechanics, normal-mode analysis, molecular dynamics and tree energy calculations to simulate the structural and energetic properties of molecules
    • Pearlman, D. A.; Case, D. A.; Caldwell, J. W.; Ross, W. S.; Chentham, T. E.; DeBolt, S.; Ferguson, D.; Seibel, G. L.; Kollman, P. A. AMBER, a package of computer programs for applying molecular mechanics, normal-mode analysis, molecular dynamics and tree energy calculations to simulate the structural and energetic properties of molecules. Comput. Phys. Commun. 1995, 91, 1-41.
    • (1995) Comput. Phys. Commun. , vol.91 , pp. 1-41
    • Pearlman, D.A.1    Case, D.A.2    Caldwell, J.W.3    Ross, W.S.4    Chentham, T.E.5    DeBolt, S.6    Ferguson, D.7    Seibel, G.L.8    Kollman, P.A.9
  • 94
    • 0004016501 scopus 로고
    • Comparison of simple potential functions for simulating liquid water
    • Jorgensen, W. L.; Chandrasekbar, J.; Madura, J.; Klein, M. L. Comparison of simple potential functions for simulating liquid water. J. Chem. Phys. 1983, 79, 926-935.
    • (1983) J. Chem. Phys. , vol.79 , pp. 926-935
    • Jorgensen, W.L.1    Chandrasekbar, J.2    Madura, J.3    Klein, M.L.4
  • 95
    • 0001398008 scopus 로고    scopus 로고
    • How well does a restrained electrostatic potential (RESP) model perform in calculating conformational energies of organic and biological molecules?
    • Wang, J.; Cieplak, P.; Kollman, P. A. How well does a restrained electrostatic potential (RESP) model perform in calculating conformational energies of organic and biological molecules? J. Comput. Chem. 2000, 21, 1049-1074.
    • (2000) J. Comput. Chem. , vol.21 , pp. 1049-1074
    • Wang, J.1    Cieplak, P.2    Kollman, P.A.3
  • 97
    • 33846823909 scopus 로고
    • Particle mesh Ewald: An Nlog-(N) method for Ewald sums in large systems
    • Darden, T.; York, D.; Pedersen, L. Particle mesh Ewald: An Nlog-(N) method For Ewald sums in large systems. J. Chem. Phys. 1993, 98, 10089-10092.
    • (1993) J. Chem. Phys. , vol.98 , pp. 10089-10092
    • Darden, T.1    York, D.2    Pedersen, L.3
  • 99
    • 0019779041 scopus 로고
    • Synthesis and evaluation of some stable multisubstrate adducts as specific inhibitors of spermidine synthase
    • Tang, K. C.; Mariuza, R.; Coward, J. K. Synthesis and evaluation of some stable multisubstrate adducts as specific inhibitors of spermidine synthase. J. Med. Chem. 1981, 24, 1277-1284.
    • (1981) J. Med. Chem. , vol.24 , pp. 1277-1284
    • Tang, K.C.1    Mariuza, R.2    Coward, J.K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.