Exploration of rice protein hydrolysates and peptides with special reference to antioxidant potential: Computational derived approaches for bio-activity determination

Trends in Food Science and Technology

Volumn 80, Issue , 2018, Pages 61-70

  Rani, Sapna ^a   Pooja, Km ^b   Pal, Gaurav Kumar ^c  

^a NATIONAL DAIRY RESEARCH INSTITUTE   (India)

^b CH CHARAN SINGH UNIVERSITY   (India)

^c MEERUT INSTITUTE OF ENGINEERING AND TECHNOLOGY   (India)

Author keywords

Bioactive rice derived peptides; Computational approaches; Functional food products; Protein hydrolysates; Rice processing by products

Indexed keywords

ANTIOXIDANTS; BIOCHEMISTRY; BIOTECHNOLOGY; HYDROLYSIS; PEPTIDES; PLANTS (BOTANY);

ANTI-OXIDANT ACTIVITIES; ANTIOXIDANT POTENTIAL; BIOTECHNOLOGICAL APPLICATIONS; COMPUTATIONAL APPROACH; NUTRACEUTICAL PRODUCTS; PROTEIN HYDROLYSATE; RICE PROTEIN HYDROLYSATES; THERAPEUTIC POTENTIALS;

FUNCTIONAL FOOD;

EID: 85051408392     PISSN: 09242244     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tifs.2018.07.013     Document Type: Review

References (76)

1. Agyei, D., Danquah, M.K., Industrial-scale manufacturing of pharmaceutical-grade bioactive peptides. Biotechnology Advances 29:3 (2011), 272–277.
2. Agyei, D., Tsopmo, A., Udenigwe, C.C., Bioinformatics and peptidomics approaches to the discovery and analysis of food-derived bioactive peptides. Analytical and Bioanalytical Chemistry 410:15 (2018), 3463–3472 https://doi.org/10.1007/s00216-018-0974-1.
3. Altschul, S.F., Madden, T.L., Schäffer, A.A., Zhang, J., Zhang, Z., Miller, W., et al. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Research 25:17 (1997), 3389–3402.
4. Altschul, S.F., Wootton, J.C., Gertz, E.M., Agarwala, R., Morgulis, A., Schäffer, A.A., et al. Protein database searches using compositionally adjusted substitution matrices. FEBS Journal 272:20 (2005), 5101–5109 https://doi.org/10.1111/j.1742-4658.2005.04945.x.
5. Amagliani, L., O'Regan, J., Kelly, A.L., O'Mahony, J.A., Composition and protein profile analysis of rice protein ingredients. Journal of Food Composition and Analysis 59 (2017), 18–26.
6. Amagliani, L., O'Regan, J., Kelly, A.L., O'Mahony, J.A., The composition, extraction, functionality and applications of rice proteins: A review. Trends in Food Science & Technology 64 (2017), 1–12.
7. Anal, A.K., Noomhorm, A., Vongsawasdi, P., Protein hydrolysates and bioactive peptides from seafood and crustacean waste: Their extraction, bioactive properties and industrial perspectives. Marine proteins and Peptides: Biological Activities and Applications, 2013, 709–735.
8. Arsa, S., Theerakulkait, C., Preparation, aroma characteristics and volatile compounds of flavorings from enzymatic hydrolyzed rice bran protein concentrate. Journal of the Science of Food and Agriculture 98:12 (2018), 4479–4487 https://doi.org/10.1002/jsfa.8972.
9. Carrasco-Castilla, J., Hernández-Álvarez, A.J., Jiménez-Martínez, C., Gutiérrez-López, G.F., Dávila-Ortiz, G., Use of proteomics and peptidomics methods in food bioactive peptide science and engineering. Food Engineering Reviews 4:4 (2012), 224–243.
10. Chandi, G.K., Sogi, D.S., Functional properties of rice bran protein concentrates. Journal of Food Engineering 79:2 (2007), 592–597.
11. Chang, Y.-W., Alli, I., In silico assessment: Suggested homology of chickpea (Cicer arietinum L.) legumin and prediction of ACE-inhibitory peptides from chickpea proteins using BLAST and BIOPEP analyses. Food Research International 49:1 (2012), 477–486.
12. Cheetangdee, N., Benjakul, S., Antioxidant activities of rice bran protein hydrolysates in bulk oil and oil-in-water emulsion. Journal of the Science of Food and Agriculture 95:7 (2015), 1461–1468.
13. Chen, J., Liu, S., Ye, R., Cai, G., Ji, B., Wu, Y., Angiotensin-I converting enzyme (ACE) inhibitory tripeptides from rice protein hydrolysate: Purification and characterization. Journal of Functional Foods 5:4 (2013), 1684–1692.
14. Dei Piu, L., Tassoni, A., Serrazanetti, D.I., Ferri, M., Babini, E., Tagliazucchi, D., et al. Exploitation of starch industry liquid by-product to produce bioactive peptides from rice hydrolyzed proteins. Food Chemistry 155 (2014), 199–206.
15. Dimitrov, I., Bangov, I., Flower, D.R., Doytchinova, I., AllerTOP v. 2-a server for in silico prediction of allergens. Journal of Molecular Modeling 20:6 (2014), 1–6.
16. Fabian, C., Ju, Y.-H., A review on rice bran protein: Its properties and extraction methods. Critical Reviews in Food Science and Nutrition 51:9 (2011), 816–827.
17. Fang, Y., Chen, X., Luo, P., Pei, F., Kimatu, B.M., Liu, K., et al. The correlation between in vitro antioxidant activity and immunomodulatory activity of enzymatic hydrolysates from selenium-enriched rice protein. Journal of Food Science 82:2 (2017), 517–522.
18. Fu, Y., Wu, W., Zhu, M., Xiao, Z., In silico assessment of the potential of patatin as a precursor of bioactive peptides. Journal of Food Biochemistry 40:3 (2016), 366–370.
19. Fu, Y., Young, J.F., Løkke, M.M., Lametsch, R., Aluko, R.E., Therkildsen, M., Revalorisation of bovine collagen as a potential precursor of angiotensin I-converting enzyme (ACE) inhibitory peptides based on in silico and in vitro protein digestions. Journal of Functional Foods 24 (2016), 196–206.
20. Galanakis, C.M., Recovery of high added-value components from food wastes: Conventional, emerging technologies and commercialized applications. Trends in Food Science & Technology 26:2 (2012), 68–87.
21. Galanakis, C.M., Emerging technologies for the production of nutraceuticals from agricultural by-products: A viewpoint of opportunities and challenges. Food and Bioproducts Processing 91:4 (2013), 575–579.
22. Gasteiger, E., Hoogland, C., Gattiker, A., Duvaud, S., Wilkins, M.R., Appel, R.D., et al. Protein identification and analysis tools on the ExPASy server. 2005, Springer Retrieved from http://link.springer.com/protocol/10.1385/1-59259-890-0.
23. Guo, L., Harnedy, P.A., Li, B., Hou, H., Zhang, Z., Zhao, X., et al. Food protein-derived chelating peptides: Biofunctional ingredients for dietary mineral bioavailability enhancement. Trends in Food Science & Technology 37:2 (2014), 92–105 https://doi.org/10.1016/j.tifs.2014.02.007.
24. Gupta, S., Kapoor, P., Chaudhary, K., Gautam, A., Kumar, R., Consortium, O.S.D.D., et al. In silico approach for predicting toxicity of peptides and proteins. PLoS One, 8(9), 2013, e73957 https://doi.org/10.1371/journal.pone.0073957.
25. Harnedy, P.A., FitzGerald, R.J., Bioactive peptides from marine processing waste and shellfish: A review. Journal of Functional Foods 4:1 (2012), 6–24.
26. Hellberg, S., Sjoestroem, M., Skagerberg, B., Wold, S., Peptide quantitative structure-activity relationships, a multivariate approach. Journal of Medicinal Chemistry 30:7 (1987), 1126–1135.
27. Iwaniak, A., Minkiewicz, P., Darewicz, M., Hrynkiewicz, M., Food protein-originating peptides as tastants-Physiological, technological, sensory, and bioinformatic approaches. Food Research International 89 (2016), 27–38.
28. Iwaniak, A., Minkiewicz, P., Darewicz, M., Protasiewicz, M., Mogut, D., Chemometrics and cheminformatics in the analysis of biologically active peptides from food sources. Journal of Functional Foods 16 (2015), 334–351.
29. Iwaniak, A., Minkiewicz, P., Darewicz, M., Sieniawski, K., Starowicz, P., BIOPEP database of sensory peptides and amino acids. Food Research International 85 (2016), 155–161.
30. Kim, S.-K., Wijesekara, I., Development and biological activities of marine-derived bioactive peptides: A review. Journal of Functional Foods 2:1 (2010), 1–9.
31. Korhonen, H., Pihlanto, A., Bioactive peptides: Production and functionality. International Dairy Journal 16:9 (2006), 945–960.
32. Lafarga, T., O'Connor, P., Hayes, M., Identification of novel dipeptidyl peptidase-IV and angiotensin-I-converting enzyme inhibitory peptides from meat proteins using in silico analysis. Peptides 59 (2014), 53–62.
33. Liu, Y., Wang, Z., Li, H., Liang, M., Yang, L., In vitro antioxidant activity of rice protein affected by alkaline degree and gastrointestinal protease digestion. Journal of the Science of Food and Agriculture 96:15 (2016), 4940–4950.
34. Liu, K., Zhao, Y., Chen, F., Fang, Y., Purification and identification of Se-containing antioxidative peptides from enzymatic hydrolysates of Se-enriched brown rice protein. Food Chemistry 187 (2015), 424–430.
35. López-Barrios, L., Gutiérrez-Uribe, J.A., Serna-Saldívar, S.O., Bioactive peptides and hydrolysates from pulses and their potential use as functional ingredients. Journal of Food Science 79:3 (2014), R273–R283.
36. Minkiewicz, P., Dziuba, J., Iwaniak, A., Dziuba, M., Darewicz, M., BIOPEP database and other programs for processing bioactive peptide sequences. Journal of AOAC International 91:4 (2008), 965–980.
37. Minkiewicz, P., Dziuba, J., Michalska, J., Bovine meat proteins as potential precursors of biologically active peptides - a computational study based on the BIOPEP database. Food Science and Technology International 17:1 (2011), 39–45 https://doi.org/10.1177/1082013210368461.
38. Mohan, A., Rajendran, S.R., He, Q.S., Bazinet, L., Udenigwe, C.C., Encapsulation of food protein hydrolysates and peptides: A review. RSC Advances 5:97 (2015), 79270–79278.
39. Mooney, C., Haslam, N.J., Holton, T.A., Pollastri, G., Shields, D.C., PeptideLocator: Prediction of bioactive peptides in protein sequences. Bioinformatics 29:9 (2013), 1120–1126 https://doi.org/10.1093/bioinformatics/btt103.
40. Mooney, C., Haslam, N.J., Pollastri, G., Shields, D.C., Towards the improved discovery and design of functional peptides: Common features of diverse classes permit generalized prediction of bioactivity. PLoS One, 7(10), 2012, e45012 https://doi.org/10.1371/journal.pone.0045012.
41. Najafian, L., Babji, A.S., A review of fish-derived antioxidant and antimicrobial peptides: Their production, assessment, and applications. Peptides 33:1 (2012), 178–185.
42. Nongonierma, A.B., FitzGerald, R.J., An in silico model to predict the potential of dietary proteins as sources of dipeptidyl peptidase IV (DPP-IV) inhibitory peptides. Food Chemistry 165 (2014), 489–498.
43. Nongonierma, A.B., Mooney, C., Shields, D.C., FitzGerald, R.J., In silico approaches to predict the potential of milk protein-derived peptides as dipeptidyl peptidase IV (DPP-IV) inhibitors. Peptides 57 (2014), 43–51.
44. Pal, G.K., Suresh, P.V., Sustainable valorisation of seafood by-products: Recovery of collagen and development of collagen-based novel functional food ingredients. Innovative Food Science & Emerging Technologies 37:Part B (2016), 201–215 https://doi.org/10.1016/j.ifset.2016.03.015.
45. Pal, G.K., Suresh, P.V., Physico-chemical characteristics and fibril-forming capacity of carp swim bladder collagens and exploration of their potential bioactive peptides by in silico approaches. International Journal of Biological Macromolecules 101 (2017), 304–313.
46. Phongthai, S., D'Amico, S., Schoenlechner, R., Homthawornchoo, W., Rawdkuen, S., Fractionation and antioxidant properties of rice bran protein hydrolysates stimulated by in vitro gastrointestinal digestion. Food Chemistry 240 (2018), 156–164.
47. Phongthai, S., Lim, S.-T., Rawdkuen, S., Optimization of microwave-assisted extraction of rice bran protein and its hydrolysates properties. Journal of Cereal Science 70 (2016), 146–154.
48. Pooja, K., Rani, S., Physico-chemical, sensory and toxicity characteristics of dipeptidyl peptidase-iv inhibitory peptides from rice bran-derived globulin using computational approaches. International Journal of Peptide Research and Therapeutics 23:4 (2017), 519–529.
49. Pooja, K., Rani, S., Prakash, B., In silico approaches towards exploration of rice bran proteins derived angiotensin-I-converting enzyme inhibitory peptides. International Journal of Food Properties 20 (2017), 2178–2191 https://doi.org/10.1080/10942912.2017.1368552.
50. Pripp, A.H., Isaksson, T., Stepaniak, L., Sørhaug, T., Ardö Y., Quantitative structure activity relationship modelling of peptides and proteins as a tool in food science. Trends in Food Science & Technology 16:11 (2005), 484–494.
51. Rani, S., Pooja, K., Elucidation of structural and functional characteristics of collagenase from Pseudomonas aeruginosa. Process Biochemistry 64 (2018), 116–123 https://doi.org/10.1016/j.procbio.2017.09.029.
52. Rani, S., Pooja, K., Kumar, G., Exploration of potential angiotensin converting enzyme inhibitory peptides generated from enzymatic hydrolysis of goat milk proteins. Biocatalysis and Agricultural Biotechnology 11 (2017), 83–88 https://doi.org/10.1016/j.bcab.2017.06.008.
53. Samaranayaka, A.G., Li-Chan, E.C., Food-derived peptidic antioxidants: A review of their production, assessment, and potential applications. Journal of Functional Foods 3:4 (2011), 229–254.
54. Selamassakul, O., Laohakunjit, N., Kerdchoechuen, O., Ratanakhanokchai, K., A novel multi-biofunctional protein from brown rice hydrolysed by endo/endo-exoproteases. Food & Function 7:6 (2016), 2635–2644.
55. Senaphan, K., Sangartit, W., Pakdeechote, P., Kukongviriyapan, V., Pannangpetch, P., Thawornchinsombut, S., et al. Rice bran protein hydrolysates reduce arterial stiffening, vascular remodeling and oxidative stress in rats fed a high-carbohydrate and high-fat diet. European Journal of Nutrition 57:1 (2018), 219–230.
56. Sereewatthanawut, I., Prapintip, S., Watchiraruji, K., Goto, M., Sasaki, M., Shotipruk, A., Extraction of protein and amino acids from deoiled rice bran by subcritical water hydrolysis. Bioresource Technology 99:3 (2008), 555–561.
57. Sharif, M.K., Butt, M.S., Anjum, F.M., Khan, S.H., Rice bran: A novel functional ingredient. Critical Reviews in Food Science and Nutrition 54:6 (2014), 807–816.
58. Sila, A., Bougatef, A., Antioxidant peptides from marine by-products: Isolation, identification and application in food systems. A review. Journal of Functional Foods 21 (2016), 10–26.
59. Sohail, M., Rakha, A., Butt, M.S., Iqbal, M.J., Rashid, S., Rice bran nutraceutics: A comprehensive review. Critical Reviews in Food Science and Nutrition 57:17 (2017), 3771–3780.
60. Thamnarathip, P., Jangchud, K., Nitisinprasert, S., Vardhanabhuti, B., Identification of peptide molecular weight from rice bran protein hydrolysate with high antioxidant activity. Journal of Cereal Science 69 (2016), 329–335.
61. Udenigwe, C.C., Bioinformatics approaches, prospects and challenges of food bioactive peptide research. Trends in Food Science & Technology 36:2 (2014), 137–143.
62. Udenigwe, C.C., Towards rice bran protein utilization: In silico insight on the role of oryzacystatins in biologically-active peptide production. Food Chemistry 191 (2016), 135–138.
63. Udenigwe, C.C., Aluko, R.E., Food protein-derived bioactive peptides: Production, processing, and potential health benefits. Journal of Food Science 77:1 (2012), R11–R24.
64. Udenigwe, C.C., Gong, M., Wu, S., In silico analysis of the large and small subunits of cereal RuBisCO as precursors of cryptic bioactive peptides. Process Biochemistry 48:11 (2013), 1794–1799.
65. Wang, X., Chen, H., Fu, X., Li, S., Wei, J., A novel antioxidant and ACE inhibitory peptide from rice bran protein: Biochemical characterization and molecular docking study. Lwt-food Science and Technology 75 (2017), 93–99.
66. Wang, Z., Li, H., Liang, M., Yang, L., Glutelin and prolamin, different components of rice protein, exert differently in vitro antioxidant activities. Journal of Cereal Science 72 (2016), 108–116.
67. Wang, Z., Liu, Y., Li, H., Yang, L., Rice proteins, extracted by alkali and α-amylase, differently affect in vitro antioxidant activity. Food Chemistry 206 (2016), 137–145.
68. Wattanasiritham, L., Theerakulkait, C., Wickramasekara, S., Maier, C.S., Stevens, J.F., Isolation and identification of antioxidant peptides from enzymatically hydrolyzed rice bran protein. Food Chemistry 192 (2016), 156–162.
69. Wu, J., Aluko, R.E., Nakai, S., Structural requirements of angiotensin I-converting enzyme inhibitory peptides: Quantitative structure- activity relationship study of di-and tripeptides. Journal of Agricultural and Food Chemistry 54:3 (2006), 732–738.
70. Yan, Q.-J., Huang, L.-H., Sun, Q., Jiang, Z.-Q., Wu, X., Isolation, identification and synthesis of four novel antioxidant peptides from rice residue protein hydrolyzed by multiple proteases. Food Chemistry 179 (2015), 290–295.
71. Zambrowicz, A., Timmer, M., Polanowski, A., Lubec, G., Trziszka, T., Manufacturing of peptides exhibiting biological activity. Amino Acids 44:2 (2013), 315–320.
72. Zhang, H.J., Wang, J., Zhang, B.H., Zhang, H., Antioxidant activities of the fractionated protein hydrolysates from heat stable defatted rice bran. International Journal of Food Science and Technology 49:5 (2014), 1330–1336.
73. Zhang, J., Zhang, H., Wang, L., Guo, X., Wang, X., Yao, H., Isolation and identification of antioxidative peptides from rice endosperm protein enzymatic hydrolysate by consecutive chromatography and MALDI-TOF/TOF MS/MS. Food Chemistry 119:1 (2010), 226–234.
74. Zhao, Q., Selomulya, C., Wang, S., Xiong, H., Chen, X.D., Li, W., et al. Enhancing the oxidative stability of food emulsions with rice dreg protein hydrolysate. Food Research International 48:2 (2012), 876–884.
75. Zhao, Q., Xiong, H., Selomulya, C., Chen, X.D., Zhong, H., Wang, S., et al. Enzymatic hydrolysis of rice dreg protein: Effects of enzyme type on the functional properties and antioxidant activities of recovered proteins. Food Chemistry 134:3 (2012), 1360–1367.
76. Zhou, K., Canning, C., Sun, S., Effects of rice protein hydrolysates prepared by microbial proteases and ultrafiltration on free radicals and meat lipid oxidation. Lwt-food Science and Technology 50:1 (2013), 331–335.