-
1
-
-
0001358686
-
Etude genetique d'un bacteriophage tempere d'Echerichia coli. I. Le systeme genetique du bacteriophage lambda
-
Jacob F, Wollman E. 1954. Etude genetique d'un bacteriophage tempere d'Echerichia coli. I. Le systeme genetique du bacteriophage lambda. Ann Inst Pasteur 87:653-674
-
(1954)
Ann Inst Pasteur
, vol.87
, pp. 653-674
-
-
Jacob, F.1
Wollman, E.2
-
2
-
-
0000662394
-
A genetic study of the temperate coliphage
-
Kaiser AD. 1955. A genetic study of the temperate coliphage. Virology 1:424-443
-
(1955)
Virology
, vol.1
, pp. 424-443
-
-
Kaiser, A.D.1
-
3
-
-
40549083336
-
Involvement of DNA replication in phage lambda Red-mediated homologous recombination
-
Poteete AR. 2008. Involvement of DNA replication in phage lambda Red-mediated homologous recombination. Mol Microbiol 68:66-74
-
(2008)
Mol Microbiol
, vol.68
, pp. 66-74
-
-
Poteete, A.R.1
-
4
-
-
52449087794
-
Rapid allelic exchange in enterohemorrhagic Escherichia coli (EHEC) and other E. coli using lambda red recombination
-
Unit5A.2
-
Savage PJ, Leong JM, Murphy KC. 2006. Rapid allelic exchange in enterohemorrhagic Escherichia coli (EHEC) and other E. coli using lambda red recombination. Curr ProtocMicrobiol Chapter 5:Unit5A.2. doi:10.1002/9780471729259.mc05a02s00
-
(2006)
Curr ProtocMicrobiol Chapter
, vol.5
-
-
Savage, P.J.1
Leong, J.M.2
Murphy, K.C.3
-
5
-
-
33847654324
-
Recombineering: in vivo genetic engineering in E. coli, S. enterica, and beyond
-
Sawitzke JA, Thomason LC, Costantino N, Bubunenko M, Datta S, Court DL. 2007. Recombineering: in vivo genetic engineering in E. coli, S. enterica, and beyond. Methods Enzymol 421:171-199
-
(2007)
Methods Enzymol
, vol.421
, pp. 171-199
-
-
Sawitzke, J.A.1
Thomason, L.C.2
Costantino, N.3
Bubunenko, M.4
Datta, S.5
Court, D.L.6
-
6
-
-
59849119654
-
Recombineering: a homologous recombination-based method of genetic engineering
-
Sharan SK, Thomason LC, Kuznetsov SG, Court DL. 2009. Recombineering: a homologous recombination-based method of genetic engineering. Nat Protoc 4:206-223
-
(2009)
Nat Protoc
, vol.4
, pp. 206-223
-
-
Sharan, S.K.1
Thomason, L.C.2
Kuznetsov, S.G.3
Court, D.L.4
-
7
-
-
39849093502
-
Recombineering: genetic engineering in bacteria using homologous recombination
-
Unit 1.16
-
Thomason L, Court DL, Bubunenko M, Costantino N, Wilson H, Datta S, Oppenheim A. 2007. Recombineering: genetic engineering in bacteria using homologous recombination. Curr Protoc Mol Biol Chapter 1:Unit 1.16. doi:10.1002/0471142727.mb0116s78
-
(2007)
Curr Protoc Mol Biol Chapter
, vol.1
-
-
Thomason, L.1
Court, D.L.2
Bubunenko, M.3
Costantino, N.4
Wilson, H.5
Datta, S.6
Oppenheim, A.7
-
8
-
-
0000880652
-
Isolation and characterization of recombination-deficient mutants of Escherichia coli K12
-
Clark AJ, Margulies AD. 1965. Isolation and characterization of recombination-deficient mutants of Escherichia coli K12. Proc Natl Acad Sci USA 53:451-459
-
(1965)
Proc Natl Acad Sci USA
, vol.53
, pp. 451-459
-
-
Clark, A.J.1
Margulies, A.D.2
-
9
-
-
84982362869
-
Behavoir of some episomal elements in a recombination-deficient mutant of Escherichia coli
-
Takano T. 1966. Behavoir of some episomal elements in a recombination-deficient mutant of Escherichia coli. Jpn J Microbiol 10:201-210
-
(1966)
Jpn J Microbiol
, vol.10
, pp. 201-210
-
-
Takano, T.1
-
10
-
-
0013956325
-
Properties of four mutants of Escherichia coli defective in genetic recombination
-
van de Putte P, Zwenk H, Rorsch A. 1966. Properties of four mutants of Escherichia coli defective in genetic recombination. Mutat Res 3:381-392
-
(1966)
Mutat Res
, vol.3
, pp. 381-392
-
-
van de Putte, P.1
Zwenk, H.2
Rorsch, A.3
-
11
-
-
0014079741
-
Behavior of lambda bacteriophage in a recombination deficienct strain of Escherichia coli
-
Brooks K, Clark AJ. 1967. Behavior of lambda bacteriophage in a recombination deficienct strain of Escherichia coli. J Virol 1:283-293
-
(1967)
J Virol
, vol.1
, pp. 283-293
-
-
Brooks, K.1
Clark, A.J.2
-
12
-
-
0014139374
-
Deletions and functions of the center of the f80-l phage genome. Evidence for a phage function promoting genetic recombination
-
Franklin NC. 1967. Deletions and functions of the center of the f80-l phage genome. Evidence for a phage function promoting genetic recombination. Genetics 57:301-318
-
(1967)
Genetics
, vol.57
, pp. 301-318
-
-
Franklin, N.C.1
-
13
-
-
0014413862
-
Mutants of bacteriophage ? defective for vegetative genetic recombination
-
Echols H, Gingery R. 1968. Mutants of bacteriophage ? defective for vegetative genetic recombination. J Mol Biol 34:239-249
-
(1968)
J Mol Biol
, vol.34
, pp. 239-249
-
-
Echols, H.1
Gingery, R.2
-
14
-
-
0014413867
-
Recombination in bacteriophage lambda. I. Mutants deficient in general recombination
-
Signer ER, Weil J. 1968. Recombination in bacteriophage lambda. I. Mutants deficient in general recombination. J Mol Biol 34:261-271
-
(1968)
J Mol Biol
, vol.34
, pp. 261-271
-
-
Signer, E.R.1
Weil, J.2
-
15
-
-
0002153666
-
The role of recombination in the growth of bacteriophage ?. I. The Gamma gene
-
In Hershey AD (ed), Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
Zissler J, Singer E, Schaefer F. 1971. The role of recombination in the growth of bacteriophage ?. I. The Gamma gene, p 455-468. In Hershey AD (ed), The Bacteriophage Lambda. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
(1971)
The Bacteriophage Lambda
, pp. 455-468
-
-
Zissler, J.1
Singer, E.2
Schaefer, F.3
-
16
-
-
0015914828
-
Replication of bacteriophage ? DNA dependent on the function of host and viral genes. I. Interaction of red, gam and rec
-
Enquist LW, Skalka A. 1973. Replication of bacteriophage ? DNA dependent on the function of host and viral genes. I. Interaction of red, gam and rec. J Mol Biol 75:185-212
-
(1973)
J Mol Biol
, vol.75
, pp. 185-212
-
-
Enquist, L.W.1
Skalka, A.2
-
17
-
-
0016754097
-
The gamma protein specified by bacteriophage gamma. Structure and inhibitory activity for the recBC enzyme of Escherichia coli
-
Karu AE, Sakaki Y, Echols H, Linn S. 1975. The gamma protein specified by bacteriophage gamma. Structure and inhibitory activity for the recBC enzyme of Escherichia coli. J Biol Chem 250:7377-7387
-
(1975)
J Biol Chem
, vol.250
, pp. 7377-7387
-
-
Karu, A.E.1
Sakaki, Y.2
Echols, H.3
Linn, S.4
-
18
-
-
84912246058
-
Transformation and transduction of Escherichia coli: the nature of recombinants formed by Rec, RecF, and lambda Red
-
In Grell RF (ed), Plenum Press, New York, NY
-
Wackernagel W, Radding CM. 1974. Transformation and transduction of Escherichia coli: the nature of recombinants formed by Rec, RecF, and lambda Red, p 111-122. In Grell RF (ed), Mechanisms in Recombination. Plenum Press, New York, NY
-
(1974)
Mechanisms in Recombination
, pp. 111-122
-
-
Wackernagel, W.1
Radding, C.M.2
-
19
-
-
0003386216
-
Transduction of recB2 host is promoted by lambda red+ function
-
In Grell RF (ed), Plenum Press, New York, NY
-
Weisberg RA, Sternberg N. 1974. Transduction of recB2 host is promoted by lambda red+ function, p 107-109. In Grell RF (ed), Mechanisms in Recombination. Plenum Press, New York, NY
-
(1974)
Mechanisms in Recombination
, pp. 107-109
-
-
Weisberg, R.A.1
Sternberg, N.2
-
20
-
-
0032715175
-
Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda
-
Kuzminov A. 1999. Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda. Microbiol Mol Biol Rev 63:751-813
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 751-813
-
-
Kuzminov, A.1
-
21
-
-
0017878169
-
Red-mediated recombination of phage lambda in a recA-recB-host
-
Stahl FW, Stahl MM, Malone RE. 1978. Red-mediated recombination of phage lambda in a recA-recB-host. Mol Gen Genet 159:207-211
-
(1978)
Mol Gen Genet
, vol.159
, pp. 207-211
-
-
Stahl, F.W.1
Stahl, M.M.2
Malone, R.E.3
-
22
-
-
0024077339
-
Activation of recF-dependent recombination in Escherichia coli by bacteriophage lambda-and P22-encoded functions
-
Poteete AR, Volkert MR. 1988. Activation of recF-dependent recombination in Escherichia coli by bacteriophage lambda-and P22-encoded functions. J Bacteriol 170:4379-4381
-
(1988)
J Bacteriol
, vol.170
, pp. 4379-4381
-
-
Poteete, A.R.1
Volkert, M.R.2
-
23
-
-
0031924072
-
Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli
-
Murphy KC. 1998. Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli. J Bacteriol 180:2063-2071
-
(1998)
J Bacteriol
, vol.180
, pp. 2063-2071
-
-
Murphy, K.C.1
-
24
-
-
0016795188
-
Recombination-deficient deletions in bacteriophage ? and their interactions with Chi mutations
-
Henderson D, Weil J. 1975. Recombination-deficient deletions in bacteriophage ? and their interactions with Chi mutations. Genetics 79:143-174
-
(1975)
Genetics
, vol.79
, pp. 143-174
-
-
Henderson, D.1
Weil, J.2
-
25
-
-
0016198522
-
Rec-mediated recombinational hot spot activity in bacteriophage lambda. II. A mutation which causes hot spot activity
-
Lam ST, Stahl MM, McMilin KD, Stahl FW. 1974. Rec-mediated recombinational hot spot activity in bacteriophage lambda. II. A mutation which causes hot spot activity. Genetics 77:425-433
-
(1974)
Genetics
, vol.77
, pp. 425-433
-
-
Lam, S.T.1
Stahl, M.M.2
McMilin, K.D.3
Stahl, F.W.4
-
26
-
-
0016809728
-
Rec-mediated recombinational hot spot activity in bacteriophage lambda. IV. Effect of heterology on Chistimulated crossing over
-
Stahl FW, Stahl MM. 1975. Rec-mediated recombinational hot spot activity in bacteriophage lambda. IV. Effect of heterology on Chistimulated crossing over. Mol Gen Genet 140:29-37
-
(1975)
Mol Gen Genet
, vol.140
, pp. 29-37
-
-
Stahl, F.W.1
Stahl, M.M.2
-
28
-
-
0028566106
-
Chi and the RecBCD enzyme of Escherichia coli
-
Myers RS, Stahl FW. 1994. Chi and the RecBCD enzyme of Escherichia coli. Annu Rev Genet 28:49-70
-
(1994)
Annu Rev Genet
, vol.28
, pp. 49-70
-
-
Myers, R.S.1
Stahl, F.W.2
-
29
-
-
0027511858
-
The recombination hotspot c is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme
-
Dixon DA, Kowalczykowski SC. 1993. The recombination hotspot c is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme. Cell 73:87-96
-
(1993)
Cell
, vol.73
, pp. 87-96
-
-
Dixon, D.A.1
Kowalczykowski, S.C.2
-
30
-
-
0029038312
-
Role of Escherichia coli recombination hotspot, c, in recABCD-dependent homologous pairing
-
Dixon DA, Kowalczykowski SC. 1995. Role of Escherichia coli recombination hotspot, c, in recABCD-dependent homologous pairing. J Biol Chem 270:16360-16370
-
(1995)
J Biol Chem
, vol.270
, pp. 16360-16370
-
-
Dixon, D.A.1
Kowalczykowski, S.C.2
-
31
-
-
0019158176
-
Unwinding and rewinding of DNA by the RecBC enzyme
-
Taylor AF, Smith GR. 1980. Unwinding and rewinding of DNA by the RecBC enzyme. Cell 22:447-457
-
(1980)
Cell
, vol.22
, pp. 447-457
-
-
Taylor, A.F.1
Smith, G.R.2
-
32
-
-
0033578824
-
A single mutation, RecB(D1080A,) eliminates RecA protein loading but not Chi recognition by RecBCD enzyme
-
Anderson DG, Churchill JJ, Kowalczykowski SC. 1999. A single mutation, RecB(D1080A,) eliminates RecA protein loading but not Chi recognition by RecBCD enzyme. J Biol Chem 274:27139-27144
-
(1999)
J Biol Chem
, vol.274
, pp. 27139-27144
-
-
Anderson, D.G.1
Churchill, J.J.2
Kowalczykowski, S.C.3
-
33
-
-
0031444642
-
The translocating RecBCD enzyme stimulates recombination by directing RecA protein onto ssDNA in a chi-regulated manner
-
Anderson DG, Kowalczykowski SC. 1997. The translocating RecBCD enzyme stimulates recombination by directing RecA protein onto ssDNA in a chi-regulated manner. Cell 90:77-86
-
(1997)
Cell
, vol.90
, pp. 77-86
-
-
Anderson, D.G.1
Kowalczykowski, S.C.2
-
34
-
-
0034697325
-
Facilitated loading of RecA protein is essential to recombination by RecBCD enzyme
-
Arnold DA, Kowalczykowski SC. 2000. Facilitated loading of RecA protein is essential to recombination by RecBCD enzyme. J Biol Chem 275:12261-12265
-
(2000)
J Biol Chem
, vol.275
, pp. 12261-12265
-
-
Arnold, D.A.1
Kowalczykowski, S.C.2
-
35
-
-
0032570022
-
Recombination in phage lambda: one geneticist's historical perspective
-
Stahl FW. 1998. Recombination in phage lambda: one geneticist's historical perspective. Gene 223:95-102
-
(1998)
Gene
, vol.223
, pp. 95-102
-
-
Stahl, F.W.1
-
36
-
-
0030930989
-
Gene replacement with linear DNA fragments in wild type Escherichia coli: enhancement by chi sites
-
Dabert P, Smith GR. 1997. Gene replacement with linear DNA fragments in wild type Escherichia coli: enhancement by chi sites. Genetics 145:877-889
-
(1997)
Genetics
, vol.145
, pp. 877-889
-
-
Dabert, P.1
Smith, G.R.2
-
37
-
-
0031929601
-
Identification of the lactococcal exonuclease/recombinase and its modulation by the putative Chi sequence
-
El Karoui M, Ehrlich D, Gruss A. 1998. Identification of the lactococcal exonuclease/recombinase and its modulation by the putative Chi sequence. Proc Natl Acad Sci USA 95:626-631
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 626-631
-
-
El Karoui, M.1
Ehrlich, D.2
Gruss, A.3
-
38
-
-
78651140282
-
The effect of lysogenic induction on the deoxyribonucleases of Escherichia coli K12-lambda. I. Appearance of a new exonuclease activity
-
Korn D, Weissbach A. 1963. The effect of lysogenic induction on the deoxyribonucleases of Escherichia coli K12-lambda. I. Appearance of a new exonuclease activity. J Biol Chem 238:3390-3394
-
(1963)
J Biol Chem
, vol.238
, pp. 3390-3394
-
-
Korn, D.1
Weissbach, A.2
-
39
-
-
78651162156
-
Purification and properties of a deoxyribonucleic acid exonuclease associated with the formation of phage 434
-
Korn D, Weissbach A. 1964. Purification and properties of a deoxyribonucleic acid exonuclease associated with the formation of phage 434. J Biol Chem 239:3849-3857
-
(1964)
J Biol Chem
, vol.239
, pp. 3849-3857
-
-
Korn, D.1
Weissbach, A.2
-
40
-
-
10344223137
-
Nuclease activity in defective lysogens of phage lambda
-
Radding CM. 1964. Nuclease activity in defective lysogens of phage lambda. Biochem Biophys Res Commun 15:8-12
-
(1964)
Biochem Biophys Res Commun
, vol.15
, pp. 8-12
-
-
Radding, C.M.1
-
41
-
-
0014216084
-
An exonuclease induced by bacteriophage lambda. II. Nature of the enzymatic reaction
-
Little JW. 1967. An exonuclease induced by bacteriophage lambda. II. Nature of the enzymatic reaction. J Biol Chem 242:679-686
-
(1967)
J Biol Chem
, vol.242
, pp. 679-686
-
-
Little, J.W.1
-
42
-
-
0014216121
-
An exonuclease induced by bacteriophage lambda. I. Preparation of the crystalline enzyme
-
Little JW, Lehman IR, Kaiser AD. 1967. An exonuclease induced by bacteriophage lambda. I. Preparation of the crystalline enzyme. J Biol Chem 242:672-678
-
(1967)
J Biol Chem
, vol.242
, pp. 672-678
-
-
Little, J.W.1
Lehman, I.R.2
Kaiser, A.D.3
-
43
-
-
0015239451
-
The role of exonuclease and beta protein of phage lambda in genetic recombination. II. Substrate specificity and the mode of action of lambda exonuclease
-
Carter DM, Radding CM. 1971. The role of exonuclease and beta protein of phage lambda in genetic recombination. II. Substrate specificity and the mode of action of lambda exonuclease. J Biol Chem 246:2502-2512
-
(1971)
J Biol Chem
, vol.246
, pp. 2502-2512
-
-
Carter, D.M.1
Radding, C.M.2
-
44
-
-
0014466441
-
Nonessential functions of bacteriophage lambda
-
Manly KF, Signer ER, Radding CM. 1969. Nonessential functions of bacteriophage lambda. Virology 37:177-188
-
(1969)
Virology
, vol.37
, pp. 177-188
-
-
Manly, K.F.1
Signer, E.R.2
Radding, C.M.3
-
45
-
-
0014966270
-
The role of exonuclease and beta protein of bacteriophage lambda in genetic recombination. I. Effects of red mutants on protein structure
-
Radding CM. 1970. The role of exonuclease and beta protein of bacteriophage lambda in genetic recombination. I. Effects of red mutants on protein structure. J Mol Biol 52:491-499
-
(1970)
J Mol Biol
, vol.52
, pp. 491-499
-
-
Radding, C.M.1
-
46
-
-
0014966263
-
Properties of recombination-deficient mutants of bacteriophage lambda
-
Shulman MJ, Hallick LM, Echols H, Signer ER. 1970. Properties of recombination-deficient mutants of bacteriophage lambda. J Mol Biol 52:501-520
-
(1970)
J Mol Biol
, vol.52
, pp. 501-520
-
-
Shulman, M.J.1
Hallick, L.M.2
Echols, H.3
Signer, E.R.4
-
47
-
-
0016705074
-
The specificity of lambda exonuclease. Interactions with single-stranded DNA
-
Sriprakash KS, Lundh N, Huh M-O, Radding CM. 1975. The specificity of lambda exonuclease. Interactions with single-stranded DNA. J Biol Chem 250:5438-5445
-
(1975)
J Biol Chem
, vol.250
, pp. 5438-5445
-
-
Sriprakash, K.S.1
Lundh, N.2
Huh, M.-O.3
Radding, C.M.4
-
48
-
-
0015212269
-
Mechanism for the action of lambda exonuclease in genetic recombination
-
Cassuto E, Radding CM. 1971. Mechanism for the action of lambda exonuclease in genetic recombination. Nat New Biol 229: 13-16
-
(1971)
Nat New Biol
, vol.229
, pp. 13-16
-
-
Cassuto, E.1
Radding, C.M.2
-
49
-
-
0033178687
-
Characterization of the interaction of lambda exonuclease with the ends of DNA
-
Mitsis PG, Kwagh JG. 1999. Characterization of the interaction of lambda exonuclease with the ends of DNA. Nucleic Acids Res 27:3057-3063
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 3057-3063
-
-
Mitsis, P.G.1
Kwagh, J.G.2
-
50
-
-
0141534308
-
Sequencedependent pausing of single lambda exonuclease molecules
-
Perkins TT, Dalal RV, Mitsis PG, Block SM. 2003. Sequencedependent pausing of single lambda exonuclease molecules. Science 301:1914-1918
-
(2003)
Science
, vol.301
, pp. 1914-1918
-
-
Perkins, T.T.1
Dalal, R.V.2
Mitsis, P.G.3
Block, S.M.4
-
52
-
-
0030881051
-
Toroidal structure of lambdaexonuclease
-
Kovall R, Matthews BW. 1997. Toroidal structure of lambdaexonuclease. Science 277:1824-1827
-
(1997)
Science
, vol.277
, pp. 1824-1827
-
-
Kovall, R.1
Matthews, B.W.2
-
53
-
-
79961050090
-
Crystal structures of lambda exonuclease in complex with DNA suggest an electrostatic ratchet mechanism for processivity
-
Zhang J, McCabe KA, Bell CE. 2011. Crystal structures of lambda exonuclease in complex with DNA suggest an electrostatic ratchet mechanism for processivity. Proc Natl Acad Sci USA 108:11872-11877
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 11872-11877
-
-
Zhang, J.1
McCabe, K.A.2
Bell, C.E.3
-
54
-
-
65149086817
-
Crystal structure of E. coli RecE protein reveals a toroidal tetramer for processing doublestranded DNA breaks
-
Zhang J, Xing X, Herr AB, Bell CE. 2009. Crystal structure of E. coli RecE protein reveals a toroidal tetramer for processing doublestranded DNA breaks. Structure 17:690-702
-
(2009)
Structure
, vol.17
, pp. 690-702
-
-
Zhang, J.1
Xing, X.2
Herr, A.B.3
Bell, C.E.4
-
55
-
-
0033105094
-
Conserved domains in DNA repair proteins and evolution of repair systems
-
Aravind L, Walker DR, Koonin EV. 1999. Conserved domains in DNA repair proteins and evolution of repair systems. Nucleic Acids Res 27:1223-1242
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1223-1242
-
-
Aravind, L.1
Walker, D.R.2
Koonin, E.V.3
-
56
-
-
0013924499
-
Regulation of lambda exonuclease. I. Properties of lambda exonuclease purified from lysogens of lambda T11 and wild type
-
Radding CM. 1966. Regulation of lambda exonuclease. I. Properties of lambda exonuclease purified from lysogens of lambda T11 and wild type. J Mol Biol 18:235-250
-
(1966)
J Mol Biol
, vol.18
, pp. 235-250
-
-
Radding, C.M.1
-
57
-
-
0013925415
-
Regulation of lambda exonuclease. II. Joint regulation of exonuclease and a new lambda antigen
-
Radding CM, Shreffler DC. 1966. Regulation of lambda exonuclease. II. Joint regulation of exonuclease and a new lambda antigen. J Mol Biol 18:251-261
-
(1966)
J Mol Biol
, vol.18
, pp. 251-261
-
-
Radding, C.M.1
Shreffler, D.C.2
-
59
-
-
0019854161
-
Beta protein of bacteriophage lambda promotes renaturation of DNA
-
Kmiec E, Holloman WK. 1981. Beta protein of bacteriophage lambda promotes renaturation of DNA. J Biol Chem 256:12636-12639
-
(1981)
J Biol Chem
, vol.256
, pp. 12636-12639
-
-
Kmiec, E.1
Holloman, W.K.2
-
60
-
-
0022912797
-
The homologous recombination system of phage lambda. Pairing activities of beta protein
-
Muniyappa K, Radding CM. 1986. The homologous recombination system of phage lambda. Pairing activities of beta protein. J Biol Chem 261:7472-7478
-
(1986)
J Biol Chem
, vol.261
, pp. 7472-7478
-
-
Muniyappa, K.1
Radding, C.M.2
-
61
-
-
0032489495
-
The beta protein of phage lambda binds preferentially to an intermediate in DNA renaturation
-
Karakousis G, Ye N, Li Z, Chiu SK, Reddy G, Radding CM. 1998. The beta protein of phage lambda binds preferentially to an intermediate in DNA renaturation. J Mol Biol 276:721-731
-
(1998)
J Mol Biol
, vol.276
, pp. 721-731
-
-
Karakousis, G.1
Ye, N.2
Li, Z.3
Chiu, S.K.4
Reddy, G.5
Radding, C.M.6
-
62
-
-
0028343501
-
Homologous pairing and strand exchange promoted by the Escherichia coli RecT protein
-
Hall SD, Kolodner RD. 1994. Homologous pairing and strand exchange promoted by the Escherichia coli RecT protein. Proc Natl Acad Sci USA 91:3205-3209
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 3205-3209
-
-
Hall, S.D.1
Kolodner, R.D.2
-
63
-
-
9144244444
-
Classification and evolutionary history of the single-strand annealing proteins, RecT, Redbeta, ERF and RAD52
-
Iyer LM, Koonin EV, Aravind L. 2002. Classification and evolutionary history of the single-strand annealing proteins, RecT, Redbeta, ERF and RAD52. BMC Genomics 3:8. doi:10.1186/1471-2164-3-8
-
(2002)
BMC Genomics
, vol.3
, pp. 8
-
-
Iyer, L.M.1
Koonin, E.V.2
Aravind, L.3
-
64
-
-
0021112867
-
Domain structure and quaternary organization of the bacteriophage P22 Erf protein
-
Poteete AR, Sauer RT, Hendrix RW. 1983. Domain structure and quaternary organization of the bacteriophage P22 Erf protein. J Mol Biol 171:401-418
-
(1983)
J Mol Biol
, vol.171
, pp. 401-418
-
-
Poteete, A.R.1
Sauer, R.T.2
Hendrix, R.W.3
-
65
-
-
0023644575
-
Localization of a DNA-binding determinant in the bacteriophage P22 Erf protein
-
Murphy KC, Casey L, Yannoutsos N, Poteete AR, Hendrix RW. 1987. Localization of a DNA-binding determinant in the bacteriophage P22 Erf protein. J Mol Biol 194:105-117
-
(1987)
J Mol Biol
, vol.194
, pp. 105-117
-
-
Murphy, K.C.1
Casey, L.2
Yannoutsos, N.3
Poteete, A.R.4
Hendrix, R.W.5
-
66
-
-
33748745569
-
Domain structure and DNA binding regions of beta protein from bacteriophage lambda
-
Wu Z, Xing X, Bohl CE, Wisler JW, Dalton JT, Bell CE. 2006. Domain structure and DNA binding regions of beta protein from bacteriophage lambda. J Biol Chem 281:25205-25214
-
(2006)
J Biol Chem
, vol.281
, pp. 25205-25214
-
-
Wu, Z.1
Xing, X.2
Bohl, C.E.3
Wisler, J.W.4
Dalton, J.T.5
Bell, C.E.6
-
67
-
-
0027385391
-
Formation of linear plasmid multimers promoted by the phage lambda Red-system in lon mutants of Escherichia coli
-
Mythili E, Muniyappa K. 1993. Formation of linear plasmid multimers promoted by the phage lambda Red-system in lon mutants of Escherichia coli. J Gen Microbiol 139:2387-2397
-
(1993)
J Gen Microbiol
, vol.139
, pp. 2387-2397
-
-
Mythili, E.1
Muniyappa, K.2
-
68
-
-
0033551177
-
Rings and filaments of beta protein from bacteriophage lambda suggest a superfamily of recombination proteins
-
Passy SI, Yu X, Li Z, Radding CM, Egelman EH. 1999. Rings and filaments of beta protein from bacteriophage lambda suggest a superfamily of recombination proteins. Proc Natl Acad Sci USA 96:4279-4284
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 4279-4284
-
-
Passy, S.I.1
Yu, X.2
Li, Z.3
Radding, C.M.4
Egelman, E.H.5
-
69
-
-
67651164996
-
Conformational adaptability of Redbeta during DNA annealing and implications for its structural relationship with Rad52
-
Erler A, Wegmann S, Elie-Caille C, Bradshaw CR, Maresca M, Seidel R, Habermann B, Muller DJ, Stewart AF. 2009. Conformational adaptability of Redbeta during DNA annealing and implications for its structural relationship with Rad52. J Mol Biol 391:586-598
-
(2009)
J Mol Biol
, vol.391
, pp. 586-598
-
-
Erler, A.1
Wegmann, S.2
Elie-Caille, C.3
Bradshaw, C.R.4
Maresca, M.5
Seidel, R.6
Habermann, B.7
Muller, D.J.8
Stewart, A.F.9
-
70
-
-
0031902872
-
Rad52 forms ring structures and co-operates with RPA in singlestrand DNA annealing
-
Shinohara A, Shinohara M, Ohta T, Matsuda S, Ogawa T. 1998. Rad52 forms ring structures and co-operates with RPA in singlestrand DNA annealing. Genes Cells 3:145-156
-
(1998)
Genes Cells
, vol.3
, pp. 145-156
-
-
Shinohara, A.1
Shinohara, M.2
Ohta, T.3
Matsuda, S.4
Ogawa, T.5
-
71
-
-
0037108889
-
Structure of the single-strand annealing domain of human RAD52 protein
-
Singleton MR, Wentzell LM, Liu Y, West SC, Wigley DB. 2002. Structure of the single-strand annealing domain of human RAD52 protein. Proc Natl Acad Sci USA 99:13492-13497
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 13492-13497
-
-
Singleton, M.R.1
Wentzell, L.M.2
Liu, Y.3
West, S.C.4
Wigley, D.B.5
-
72
-
-
0034704903
-
The human Rad52 protein exists as a heptameric ring
-
Stasiak AZ, Larquet E, Stasiak A, Muller S, Engel A, Van Dyck E, West SC, Egelman EH. 2000. The human Rad52 protein exists as a heptameric ring. Curr Biol 10:337-340
-
(2000)
Curr Biol
, vol.10
, pp. 337-340
-
-
Stasiak, A.Z.1
Larquet, E.2
Stasiak, A.3
Muller, S.4
Engel, A.5
Van Dyck, E.6
West, S.C.7
Egelman, E.H.8
-
73
-
-
0029563182
-
Electron microscopic visualization of RecT protein and its complexes with DNA
-
Thresher RJ, Makhov AM, Hall SD, Kolodner R, Griffith JD. 1995. Electron microscopic visualization of RecT protein and its complexes with DNA. J Mol Biol 254:364-371
-
(1995)
J Mol Biol
, vol.254
, pp. 364-371
-
-
Thresher, R.J.1
Makhov, A.M.2
Hall, S.D.3
Kolodner, R.4
Griffith, J.D.5
-
74
-
-
0032489359
-
The beta protein of phage lambda promotes strand exchange
-
Li Z, Karakousis G, Chiu SK, Reddy G, Radding CM. 1998. The beta protein of phage lambda promotes strand exchange. J Mol Biol 276:733-744
-
(1998)
J Mol Biol
, vol.276
, pp. 733-744
-
-
Li, Z.1
Karakousis, G.2
Chiu, S.K.3
Reddy, G.4
Radding, C.M.5
-
75
-
-
33847778234
-
Motoring along with the bacterial RecA protein
-
Cox MM. 2007. Motoring along with the bacterial RecA protein. Nat Rev Mol Cell Biol 8:127-138
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 127-138
-
-
Cox, M.M.1
-
76
-
-
0030633568
-
RecA protein: structure, function, and role in recombinational DNA repair
-
Roca AI, Cox MM. 1997. RecA protein: structure, function, and role in recombinational DNA repair. Prog Nucleic Acid Res Mol Biol 56:129-223
-
(1997)
Prog Nucleic Acid Res Mol Biol
, vol.56
, pp. 129-223
-
-
Roca, A.I.1
Cox, M.M.2
-
77
-
-
10344259670
-
Strand invasion promoted by recombination protein beta of coliphage lambda
-
Rybalchenko N, Golub EI, Bi B, Radding CM. 2004. Strand invasion promoted by recombination protein beta of coliphage lambda. Proc Natl Acad Sci USA 101:17056-17060
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 17056-17060
-
-
Rybalchenko, N.1
Golub, E.I.2
Bi, B.3
Radding, C.M.4
-
78
-
-
4644225318
-
Exchange ofDNAbase pairs that coincides with recognition of homology promoted by E. coli RecA protein
-
Folta-Stogniew E, O'Malley S, Gupta R, Anderson KS, Radding CM. 2004. Exchange ofDNAbase pairs that coincides with recognition of homology promoted by E. coli RecA protein. Mol Cell 15:965-975
-
(2004)
Mol Cell
, vol.15
, pp. 965-975
-
-
Folta-Stogniew, E.1
O'Malley, S.2
Gupta, R.3
Anderson, K.S.4
Radding, C.M.5
-
79
-
-
0033231554
-
Rapid exchange of A:T base pairs is essential for recognition of DNA homology by human Rad51 recombination protein
-
Gupta RC, Folta-Stogniew E, O'Malley S, Takahashi M, Radding CM. 1999. Rapid exchange of A:T base pairs is essential for recognition of DNA homology by human Rad51 recombination protein. Mol Cell 4:705-714
-
(1999)
Mol Cell
, vol.4
, pp. 705-714
-
-
Gupta, R.C.1
Folta-Stogniew, E.2
O'Malley, S.3
Takahashi, M.4
Radding, C.M.5
-
80
-
-
0033555531
-
Human Rad51 protein can form homologous joints in the absence of net strand exchange
-
Gupta RC, Folta-Stogniew E, Radding CM. 1999. Human Rad51 protein can form homologous joints in the absence of net strand exchange. J Biol Chem 274:1248-1256
-
(1999)
J Biol Chem
, vol.274
, pp. 1248-1256
-
-
Gupta, R.C.1
Folta-Stogniew, E.2
Radding, C.M.3
-
81
-
-
0023069449
-
Enzymes of general recombination
-
Cox M, Lehman IR. 1987. Enzymes of general recombination. Annu Rev Biochem 56:229-262
-
(1987)
Annu Rev Biochem
, vol.56
, pp. 229-262
-
-
Cox, M.1
Lehman, I.R.2
-
82
-
-
0021215606
-
Mechanism of the concerted action of RecA protein and helix destabilizing proteins in homologous recombination
-
Muniyappa K, Shaner SL, Tang SS, Radding CM. 1984. Mechanism of the concerted action of RecA protein and helix destabilizing proteins in homologous recombination. Proc Natl Acad Sci USA 81:2757-2761
-
(1984)
Proc Natl Acad Sci USA
, vol.81
, pp. 2757-2761
-
-
Muniyappa, K.1
Shaner, S.L.2
Tang, S.S.3
Radding, C.M.4
-
83
-
-
34447290425
-
The crystal structure of lambda-Gam protein suggests a model for RecBCD inhibition
-
Court R, Cook N, Saikrishnan K, Wigley D. 2007. The crystal structure of lambda-Gam protein suggests a model for RecBCD inhibition. J Mol Biol 371:25-33
-
(2007)
J Mol Biol
, vol.371
, pp. 25-33
-
-
Court, R.1
Cook, N.2
Saikrishnan, K.3
Wigley, D.4
-
84
-
-
34447098490
-
The lambda Gam protein inhibits RecBCD binding to dsDNA ends
-
Murphy KC. 2007. The lambda Gam protein inhibits RecBCD binding to dsDNA ends. J Mol Biol 371:19-24
-
(2007)
J Mol Biol
, vol.371
, pp. 19-24
-
-
Murphy, K.C.1
-
85
-
-
0017759642
-
Protection of parental T4 DNA from a restriction exonuclease by the product of gene 2
-
Oliver DB, Goldberg EB. 1977. Protection of parental T4 DNA from a restriction exonuclease by the product of gene 2. J Mol Biol 116:877-881
-
(1977)
J Mol Biol
, vol.116
, pp. 877-881
-
-
Oliver, D.B.1
Goldberg, E.B.2
-
86
-
-
0027992123
-
Biochemical characterization of P22 phagemodified Escherichia coli RecBCD enzyme
-
Murphy KC. 1994. Biochemical characterization of P22 phagemodified Escherichia coli RecBCD enzyme. J Biol Chem 269:22507-22516
-
(1994)
J Biol Chem
, vol.269
, pp. 22507-22516
-
-
Murphy, K.C.1
-
87
-
-
0034681305
-
Bacteriophage P22 Abc2 protein binds to RecC increases the 5' strand nicking activity of RecBCD and together with lambda bet, promotes Chi-independent recombination
-
Murphy KC. 2000. Bacteriophage P22 Abc2 protein binds to RecC increases the 5' strand nicking activity of RecBCD and together with lambda bet, promotes Chi-independent recombination. J Mol Biol 296:385-401
-
(2000)
J Mol Biol
, vol.296
, pp. 385-401
-
-
Murphy, K.C.1
-
88
-
-
0027453082
-
Properties of Escherichia coli expressing bacteriophage P22 Abc (Anti-RecBCD) proteins, including inhibition of Chi activity
-
Murphy KC, Lewis LJ. 1993. Properties of Escherichia coli expressing bacteriophage P22 Abc (Anti-RecBCD) proteins, including inhibition of Chi activity. J Bacteriol 175:1756-1766
-
(1993)
J Bacteriol
, vol.175
, pp. 1756-1766
-
-
Murphy, K.C.1
Lewis, L.J.2
-
89
-
-
0025925181
-
Lambda Gam protein inhibits the helicase and chi-stimulated recombination activities of Escherichia coli RecBCD enzyme
-
Murphy KC. 1991. Lambda Gam protein inhibits the helicase and chi-stimulated recombination activities of Escherichia coli RecBCD enzyme. J Bacteriol 173:5808-5821
-
(1991)
J Bacteriol
, vol.173
, pp. 5808-5821
-
-
Murphy, K.C.1
-
90
-
-
0027228174
-
In vivo studies on the interaction of RecBCD enzyme and lambda Gam protein
-
Marsic N, Roje S, Stojiljkovic I, Salaj-Smic E, Trgovcevic Z. 1993. In vivo studies on the interaction of RecBCD enzyme and lambda Gam protein. J Bacteriol 175:4738-4743
-
(1993)
J Bacteriol
, vol.175
, pp. 4738-4743
-
-
Marsic, N.1
Roje, S.2
Stojiljkovic, I.3
Salaj-Smic, E.4
Trgovcevic, Z.5
-
91
-
-
0022461414
-
Selective inhibition of Escherichia coli recBC activities by plasmid-encoded GamS function of phage lambda
-
Friedman SA, Hays JB. 1986. Selective inhibition of Escherichia coli recBC activities by plasmid-encoded GamS function of phage lambda. Gene 43:255-263
-
(1986)
Gene
, vol.43
, pp. 255-263
-
-
Friedman, S.A.1
Hays, J.B.2
-
92
-
-
0035844990
-
Cell toxicity caused by products of the p(L) operon of bacteriophage lambda
-
Sergueev K, Yu D, Austin S, Court D. 2001. Cell toxicity caused by products of the p(L) operon of bacteriophage lambda. Gene 272:227-235
-
(2001)
Gene
, vol.272
, pp. 227-235
-
-
Sergueev, K.1
Yu, D.2
Austin, S.3
Court, D.4
-
93
-
-
0015044799
-
Involvement of recombination genes in growth and viability of Escherichia coli K-12
-
Capaldo-Kimball F, Barbour SD. 1971. Involvement of recombination genes in growth and viability of Escherichia coli K-12. J Bacteriol 106:204-212
-
(1971)
J Bacteriol
, vol.106
, pp. 204-212
-
-
Capaldo-Kimball, F.1
Barbour, S.D.2
-
94
-
-
0037398332
-
Chromosomal lesion suppression and removal in Escherichia coli via linear DNA degradation
-
Miranda A, Kuzminov A. 2003. Chromosomal lesion suppression and removal in Escherichia coli via linear DNA degradation. Genetics 163:1255-1271
-
(2003)
Genetics
, vol.163
, pp. 1255-1271
-
-
Miranda, A.1
Kuzminov, A.2
-
95
-
-
0016524793
-
Lambda bacteriophage gene produces and X-ray sensitivity of Escherichia coli: comparison of reddependent and gam-dependent radioresistance
-
Trogovcevic Z, Rupp WD. 1975. Lambda bacteriophage gene produces and X-ray sensitivity of Escherichia coli: comparison of reddependent and gam-dependent radioresistance. J Bacteriol 123:212-221
-
(1975)
J Bacteriol
, vol.123
, pp. 212-221
-
-
Trogovcevic, Z.1
Rupp, W.D.2
-
96
-
-
0001302945
-
Chromosome brekage accompanying genetic recombination in bacteriophage
-
Meselson M, Weigle JJ. 1961. Chromosome brekage accompanying genetic recombination in bacteriophage. Proc Natl Acad Sci USA 47:857-868
-
(1961)
Proc Natl Acad Sci USA
, vol.47
, pp. 857-868
-
-
Meselson, M.1
Weigle, J.J.2
-
98
-
-
0028533799
-
The return of copy-choice in DNA recombination
-
Tang RS. 1994. The return of copy-choice in DNA recombination. Bioessays 16:785-788
-
(1994)
Bioessays
, vol.16
, pp. 785-788
-
-
Tang, R.S.1
-
99
-
-
0000672539
-
On the mechanism of genetic recombination between DNA molecules
-
Meselson M. 1964. On the mechanism of genetic recombination between DNA molecules. J Mol Biol 9:734-745
-
(1964)
J Mol Biol
, vol.9
, pp. 734-745
-
-
Meselson, M.1
-
100
-
-
0345195590
-
Recombination in bacteriophage lambda I. Exchange of DNA promoted by phage and bacterial recombination mechanisms
-
Hershey ADE (ed),. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
Kellenberger-Gujer G, Weisberg RA. 1971. Recombination in bacteriophage lambda I. Exchange of DNA promoted by phage and bacterial recombination mechanisms. In Hershey ADE (ed), The Bacteriophage Lambda. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
(1971)
The Bacteriophage Lambda
-
-
Kellenberger-Gujer, G.1
Weisberg, R.A.2
-
101
-
-
0015457788
-
An enhancing role for DNA synthesis in formation of bacteriophage lambda recombinants
-
Stahl FW, McMilin KD, Stahl MM, Nozu Y. 1972. An enhancing role for DNA synthesis in formation of bacteriophage lambda recombinants. Proc Natl Acad Sci USA 69:3598-3601
-
(1972)
Proc Natl Acad Sci USA
, vol.69
, pp. 3598-3601
-
-
Stahl, F.W.1
McMilin, K.D.2
Stahl, M.M.3
Nozu, Y.4
-
102
-
-
0002486388
-
DNA synthesis associated with recombination, I. Recombination in a conditional DNA-negative host
-
In Hershey ADE (ed), Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
Stahl FW, Stahl MM. 1971. DNA synthesis associated with recombination, I. Recombination in a conditional DNA-negative host, p 431-442. In Hershey ADE (ed), The Bacteriophage Lambda. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
(1971)
The Bacteriophage Lambda
, pp. 431-442
-
-
Stahl, F.W.1
Stahl, M.M.2
-
103
-
-
0015506008
-
Maturation and recombination of bacteriophage lambda DNA molecules in the absence of DNA duplication
-
McMilin KD, Russo VE. 1972. Maturation and recombination of bacteriophage lambda DNA molecules in the absence of DNA duplication. J Mol Biol 68:49-55
-
(1972)
J Mol Biol
, vol.68
, pp. 49-55
-
-
McMilin, K.D.1
Russo, V.E.2
-
104
-
-
0015505998
-
A role for recombination in the production of "free-loader" lambda bacteriophage particles
-
Stahl FW, McMilin KD, Stahl MM, Malone RE, Nozu Y, Russo VE. 1972. A role for recombination in the production of "free-loader" lambda bacteriophage particles. J Mol Biol 68:57-67
-
(1972)
J Mol Biol
, vol.68
, pp. 57-67
-
-
Stahl, F.W.1
McMilin, K.D.2
Stahl, M.M.3
Malone, R.E.4
Nozu, Y.5
Russo, V.E.6
-
105
-
-
0004178319
-
DNA synthesis associated with recombination, II. Recombination between repressed chromosomes
-
In Hershey AD (ed), Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
Stahl FW, Stahl MM. 1971. DNA synthesis associated with recombination, II. Recombination between repressed chromosomes, p 443-453. In Hershey AD (ed), The Bacteriophage Lambda. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
(1971)
The Bacteriophage Lambda
, pp. 443-453
-
-
Stahl, F.W.1
Stahl, M.M.2
-
106
-
-
0016149059
-
The distribution of crossovers along unreplicated lambda bacteriophage chromosomes
-
Stahl FW, McMilin KD, Stahl MM, Crasemann JM, Lam S. 1974. The distribution of crossovers along unreplicated lambda bacteriophage chromosomes. Genetics 77:395-408
-
(1974)
Genetics
, vol.77
, pp. 395-408
-
-
Stahl, F.W.1
McMilin, K.D.2
Stahl, M.M.3
Crasemann, J.M.4
Lam, S.5
-
107
-
-
0022429101
-
In phage ?, cos is a recombinator in the Red pathway
-
Stahl FW, Kobayashi I, Stahl MM. 1985. In phage ?, cos is a recombinator in the Red pathway. J Mol Biol 181:199-209
-
(1985)
J Mol Biol
, vol.181
, pp. 199-209
-
-
Stahl, F.W.1
Kobayashi, I.2
Stahl, M.M.3
-
108
-
-
0020365304
-
Distance from cohesive end site cos determines the replication requirement for recombination in phage lambda
-
Stahl FW, Kobayashi I, Stahl MM. 1982. Distance from cohesive end site cos determines the replication requirement for recombination in phage lambda. Proc Natl Acad Sci USA 79:6318-6321
-
(1982)
Proc Natl Acad Sci USA
, vol.79
, pp. 6318-6321
-
-
Stahl, F.W.1
Kobayashi, I.2
Stahl, M.M.3
-
109
-
-
0022719370
-
DNA synthesis at the site of a Redmediated exchange in phage lambda
-
Stahl FW, Stahl MM. 1986. DNA synthesis at the site of a Redmediated exchange in phage lambda. Genetics 113:1-12
-
(1986)
Genetics
, vol.113
, pp. 1-12
-
-
Stahl, F.W.1
Stahl, M.M.2
-
110
-
-
0023427520
-
Evidence that the normal route of replication-allowed Red-mediated recombination involves double-chain ends
-
Thaler DS, Stahl MM, Stahl FW. 1987. Evidence that the normal route of replication-allowed Red-mediated recombination involves double-chain ends. EMBO J 6:3171-3176
-
(1987)
EMBO J
, vol.6
, pp. 3171-3176
-
-
Thaler, D.S.1
Stahl, M.M.2
Stahl, F.W.3
-
111
-
-
0023391330
-
Tests of the doublestrand-break repair model for red-mediated recombination of phage lambda and plasmid lambda dv
-
Thaler DS, Stahl MM, Stahl FW. 1987. Tests of the doublestrand-break repair model for red-mediated recombination of phage lambda and plasmid lambda dv. Genetics 116:501-511
-
(1987)
Genetics
, vol.116
, pp. 501-511
-
-
Thaler, D.S.1
Stahl, M.M.2
Stahl, F.W.3
-
112
-
-
0027282018
-
Efficient double-strand breakstimulated recombination promoted by the general recombination systems of phages ? and P22
-
Poteete AR, Fenton AC. 1993. Efficient double-strand breakstimulated recombination promoted by the general recombination systems of phages ? and P22. Genetics 134:1013-1021
-
(1993)
Genetics
, vol.134
, pp. 1013-1021
-
-
Poteete, A.R.1
Fenton, A.C.2
-
114
-
-
0002050661
-
A replicator's view of recombination (and repair)
-
In Grell RF (ed), Plenum Press, New York, NY
-
Skalka A. 1974. A replicator's view of recombination (and repair), p 421-432. In Grell RF (ed), Mechanisms in Genetic Recombination. Plenum Press, New York, NY
-
(1974)
Mechanisms in Genetic Recombination
, pp. 421-432
-
-
Skalka, A.1
-
115
-
-
0028102267
-
Biochemistry of homologous recombination in Escherichia coli
-
Kowalczykowski SC, Dixon DA, Eggleston AK, Lauer SD, Rehrauer WM. 1994. Biochemistry of homologous recombination in Escherichia coli. Mic Rev 58:401-465
-
(1994)
Mic Rev
, vol.58
, pp. 401-465
-
-
Kowalczykowski, S.C.1
Dixon, D.A.2
Eggleston, A.K.3
Lauer, S.D.4
Rehrauer, W.M.5
-
116
-
-
1942507939
-
Modulation of DNA repair and recombination by the bacteriophage lambda Orf function in Escherichia coli K-12
-
Poteete AR. 2004. Modulation of DNA repair and recombination by the bacteriophage lambda Orf function in Escherichia coli K-12. J Bacteriol 186:2699-2707
-
(2004)
J Bacteriol
, vol.186
, pp. 2699-2707
-
-
Poteete, A.R.1
-
117
-
-
0030704661
-
Annealing vs. invasion in phage lambda recombination
-
Stahl MM, Thomason L, Poteete AR, Tarkowski T, Kuzminov A, Stahl FW. 1997. Annealing vs. invasion in phage lambda recombination. Genetics 147:961-977
-
(1997)
Genetics
, vol.147
, pp. 961-977
-
-
Stahl, M.M.1
Thomason, L.2
Poteete, A.R.3
Tarkowski, T.4
Kuzminov, A.5
Stahl, F.W.6
-
118
-
-
0015962096
-
Phage lambda's generalized recombination system. Study of the intracellular DNA pool during lytic infection
-
Wilkins AS, Mistry J. 1974. Phage lambda's generalized recombination system. Study of the intracellular DNA pool during lytic infection. Mol Gen Genet 129:275-293
-
(1974)
Mol Gen Genet
, vol.129
, pp. 275-293
-
-
Wilkins, A.S.1
Mistry, J.2
-
119
-
-
0015829993
-
Transfection by halfmolecules and inverted molecules of ? DNA: requirement for exo and b-promoted recombination
-
Wackernagel W, Radding CM. 1973. Transfection by halfmolecules and inverted molecules of ? DNA: requirement for exo and b-promoted recombination. Virology 52:425-432
-
(1973)
Virology
, vol.52
, pp. 425-432
-
-
Wackernagel, W.1
Radding, C.M.2
-
120
-
-
84860778298
-
Full-length RecE enhances linear-linear homologous recombination and facilitates direct cloning for bioprospecting
-
Fu J, Bian X, Hu S, Wang H, Huang F, Seibert PM, Plaza A, Xia L, Muller R, Stewart AF, Zhang Y. 2012. Full-length RecE enhances linear-linear homologous recombination and facilitates direct cloning for bioprospecting. Nat Biotechnol 30:440-446
-
(2012)
Nat Biotechnol
, vol.30
, pp. 440-446
-
-
Fu, J.1
Bian, X.2
Hu, S.3
Wang, H.4
Huang, F.5
Seibert, P.M.6
Plaza, A.7
Xia, L.8
Muller, R.9
Stewart, A.F.10
Zhang, Y.11
-
121
-
-
38849190026
-
Efficient point mutagenesis in mycobacteria using single-stranded DNA recombineering: characterization of antimycobacterial drug targets
-
van Kessel JC, Hatfull GF. 2008. Efficient point mutagenesis in mycobacteria using single-stranded DNA recombineering: characterization of antimycobacterial drug targets. Mol Microbiol 67:1094-1107
-
(2008)
Mol Microbiol
, vol.67
, pp. 1094-1107
-
-
van Kessel, J.C.1
Hatfull, G.F.2
-
122
-
-
0035902579
-
DNA replication meets genetic exchange: chromosomal damage and its repair by homologous recombination
-
Kuzminov A. 2001. DNA replication meets genetic exchange: chromosomal damage and its repair by homologous recombination. Proc Natl Acad Sci USA 98:8461-8468
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8461-8468
-
-
Kuzminov, A.1
-
123
-
-
0035902459
-
Break-induced replication: a review and an example in budding yeast
-
Kraus E, Leung WY, Haber JE. 2001. Break-induced replication: a review and an example in budding yeast. Proc Natl Acad Sci USA 98:8255-8262
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8255-8262
-
-
Kraus, E.1
Leung, W.Y.2
Haber, J.E.3
-
124
-
-
42449130956
-
Break-induced replication: what is it and what is it for?
-
Llorente B, Smith CE, Symington LS. 2008. Break-induced replication: what is it and what is it for? Cell Cycle 7:859-864
-
(2008)
Cell Cycle
, vol.7
, pp. 859-864
-
-
Llorente, B.1
Smith, C.E.2
Symington, L.S.3
-
125
-
-
0032426554
-
Recombination and recombination-dependent DNA replication in bacteriophage T4
-
Mosig G. 1998. Recombination and recombination-dependent DNA replication in bacteriophage T4. Annu Rev Genet 32:379-413
-
(1998)
Annu Rev Genet
, vol.32
, pp. 379-413
-
-
Mosig, G.1
-
126
-
-
0025816222
-
Mechanisms of deletion formation in Escherichia coli plasmids. II. Deletions mediated by short direct repeats
-
Mazin AV, Kuzminov AV, Dianov GL, Salganik RI. 1991. Mechanisms of deletion formation in Escherichia coli plasmids. II. Deletions mediated by short direct repeats. Mol Gen Genet 228:209-214
-
(1991)
Mol Gen Genet
, vol.228
, pp. 209-214
-
-
Mazin, A.V.1
Kuzminov, A.V.2
Dianov, G.L.3
Salganik, R.I.4
-
127
-
-
78649531872
-
Initiation of bacteriophage T4 DNA replication and replication fork dynamics: a review in the Virology Journal series on bacteriophage T4 and its relatives
-
Kreuzer KN, Brister JR. 2010. Initiation of bacteriophage T4 DNA replication and replication fork dynamics: a review in the Virology Journal series on bacteriophage T4 and its relatives. Virol J 7:358. doi:10.1186/1743-422X-7-358
-
(2010)
Virol J
, vol.7
, pp. 358
-
-
Kreuzer, K.N.1
Brister, J.R.2
-
128
-
-
0020536611
-
Studies on the replication of Escherichia coli phage lambda DNA. I. The kinetics of DNA replication and requirements for the generation of rolling circles
-
Better M, Freifelder D. 1983. Studies on the replication of Escherichia coli phage lambda DNA. I. The kinetics of DNA replication and requirements for the generation of rolling circles. Virology 126:168-182
-
(1983)
Virology
, vol.126
, pp. 168-182
-
-
Better, M.1
Freifelder, D.2
-
129
-
-
0021355708
-
Lambda red-dependent growth and recombination of phage P22
-
Poteete AR, Fenton AC. 1984. Lambda red-dependent growth and recombination of phage P22. Virology 134:161-167
-
(1984)
Virology
, vol.134
, pp. 161-167
-
-
Poteete, A.R.1
Fenton, A.C.2
-
130
-
-
0026567307
-
Phage lambda has an analog of Escherichia coli recO, recR and recF genes
-
Sawitzke JA, Stahl FW. 1992. Phage lambda has an analog of Escherichia coli recO, recR and recF genes. Genetics 130:7-16
-
(1992)
Genetics
, vol.130
, pp. 7-16
-
-
Sawitzke, J.A.1
Stahl, F.W.2
-
131
-
-
0028046470
-
The phage lambda orf gene encodes a trans-acting factor that suppresses Escherichia coli recO, recR, and recF mutations for recombination of lambda but not of E. coli
-
Sawitzke JA, Stahl FW. 1994. The phage lambda orf gene encodes a trans-acting factor that suppresses Escherichia coli recO, recR, and recF mutations for recombination of lambda but not of E. coli. J Bacteriol 176:6730-6737
-
(1994)
J Bacteriol
, vol.176
, pp. 6730-6737
-
-
Sawitzke, J.A.1
Stahl, F.W.2
-
132
-
-
0030856710
-
Roles for lambda Orf and Escherichia coli RecO, RecR and RecF in lambda recombination
-
Sawitzke JA, Stahl FW. 1997. Roles for lambda Orf and Escherichia coli RecO, RecR and RecF in lambda recombination. Genetics 147:357-369
-
(1997)
Genetics
, vol.147
, pp. 357-369
-
-
Sawitzke, J.A.1
Stahl, F.W.2
-
133
-
-
0036237997
-
Gene products encoded in the ninR region of phage lambda participate in Red-mediated recombination
-
Tarkowski TA, Mooney D, Thomason LC, Stahl FW. 2002. Gene products encoded in the ninR region of phage lambda participate in Red-mediated recombination. Genes Cells 7:351-363
-
(2002)
Genes Cells
, vol.7
, pp. 351-363
-
-
Tarkowski, T.A.1
Mooney, D.2
Thomason, L.C.3
Stahl, F.W.4
-
134
-
-
0021351070
-
Suppression of Escherichia coli recF mutations by recA-linked srfA mutations
-
Volkert MR, Hartke MA. 1984. Suppression of Escherichia coli recF mutations by recA-linked srfA mutations. J Bacteriol 157:498-506
-
(1984)
J Bacteriol
, vol.157
, pp. 498-506
-
-
Volkert, M.R.1
Hartke, M.A.2
-
135
-
-
0029907890
-
Interactions of RecF protein with RecO, RecR, and single-stranded DNA binding proteins reveal roles for the RecF-RecO-RecR complex in DNA repair and recombination
-
Hegde SP, Qin MH, Li XH, Atkinson MA, Clark AJ, Rajagopalan M, Madiraju MV. 1996. Interactions of RecF protein with RecO, RecR, and single-stranded DNA binding proteins reveal roles for the RecF-RecO-RecR complex in DNA repair and recombination. Proc Natl Acad Sci USA 93:14468-14473
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 14468-14473
-
-
Hegde, S.P.1
Qin, M.H.2
Li, X.H.3
Atkinson, M.A.4
Clark, A.J.5
Rajagopalan, M.6
Madiraju, M.V.7
-
136
-
-
0027238208
-
Biochemical interaction of the Escherichia coli RecF, RecO, and RecR proteins with RecA protein and single-stranded DNA binding protein
-
Umezu K, Chi NW, Kolodner RD. 1993. Biochemical interaction of the Escherichia coli RecF, RecO, and RecR proteins with RecA protein and single-stranded DNA binding protein. Proc Natl Acad Sci USA 90:3875-3879
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 3875-3879
-
-
Umezu, K.1
Chi, N.W.2
Kolodner, R.D.3
-
137
-
-
0028034452
-
Protein interactions in genetic recombination in Escherichia coli. Interactions involving RecO and RecR overcome the inhibition of RecA by single-stranded DNAbinding protein
-
Umezu K, Kolodner RD. 1994. Protein interactions in genetic recombination in Escherichia coli. Interactions involving RecO and RecR overcome the inhibition of RecA by single-stranded DNAbinding protein. J Biol Chem 269:30005-30013
-
(1994)
J Biol Chem
, vol.269
, pp. 30005-30013
-
-
Umezu, K.1
Kolodner, R.D.2
-
138
-
-
0037126613
-
The RecOR proteins modulate RecA protein function at 5' ends of single-stranded DNA
-
Bork JM, Cox MM, Inman RB. 2001. The RecOR proteins modulate RecA protein function at 5' ends of single-stranded DNA. EMBO J 20:7313-7322
-
(2001)
EMBO J
, vol.20
, pp. 7313-7322
-
-
Bork, J.M.1
Cox, M.M.2
Inman, R.B.3
-
139
-
-
0038392868
-
RecFOR proteins load RecA protein onto gapped DNA to accelerate DNA strand exchange: a universal step of recombinational repair
-
Morimatsu K, Kowalczykowski SC. 2003. RecFOR proteins load RecA protein onto gapped DNA to accelerate DNA strand exchange: a universal step of recombinational repair. Mol Cell 11:1337-1347
-
(2003)
Mol Cell
, vol.11
, pp. 1337-1347
-
-
Morimatsu, K.1
Kowalczykowski, S.C.2
-
140
-
-
0022539788
-
Synthesis of linear plasmid multimers in Escherichia coli K-12
-
Cohen A, Clark AJ. 1986. Synthesis of linear plasmid multimers in Escherichia coli K-12. J Bacteriol 167:327-335
-
(1986)
J Bacteriol
, vol.167
, pp. 327-335
-
-
Cohen, A.1
Clark, A.J.2
-
141
-
-
0024355467
-
Plasmid-mediated lethality and plasmid multimer formation in an Escherichia coli recBC sbcBC mutant. Involvement of RecF recombination pathway genes
-
Kusano K, Nakayama K, Nakayama H. 1989. Plasmid-mediated lethality and plasmid multimer formation in an Escherichia coli recBC sbcBC mutant. Involvement of RecF recombination pathway genes. J Mol Biol 209:623-634
-
(1989)
J Mol Biol
, vol.209
, pp. 623-634
-
-
Kusano, K.1
Nakayama, K.2
Nakayama, H.3
-
142
-
-
23844469446
-
Functional similarities between phage lambda Orf and Escherichia coli RecFOR in initiation of genetic exchange
-
Maxwell KL, Reed P, Zhang RG, Beasley S, Walmsley AR, Curtis FA, Joachimiak A, Edwards AM, Sharples GJ. 2005. Functional similarities between phage lambda Orf and Escherichia coli RecFOR in initiation of genetic exchange. Proc Natl Acad Sci USA 102:11260-11265
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 11260-11265
-
-
Maxwell, K.L.1
Reed, P.2
Zhang, R.G.3
Beasley, S.4
Walmsley, A.R.5
Curtis, F.A.6
Joachimiak, A.7
Edwards, A.M.8
Sharples, G.J.9
-
143
-
-
34147224324
-
The single-stranded DNA-binding protein of Escherichia coli
-
Meyer RR, Laine PS. 1990. The single-stranded DNA-binding protein of Escherichia coli. Microbiol Rev 54:342-380
-
(1990)
Microbiol Rev
, vol.54
, pp. 342-380
-
-
Meyer, R.R.1
Laine, P.S.2
-
144
-
-
79952145471
-
The C-terminus of the phage lambda Orf recombinase is involved in DNA binding
-
Curtis FA, Reed P, Wilson LA, Bowers LY, Yeo RP, Sanderson JM, Walmsley AR, Sharples GJ. 2011. The C-terminus of the phage lambda Orf recombinase is involved in DNA binding. J Mol Recognit 24:333-340
-
(2011)
J Mol Recognit
, vol.24
, pp. 333-340
-
-
Curtis, F.A.1
Reed, P.2
Wilson, L.A.3
Bowers, L.Y.4
Yeo, R.P.5
Sanderson, J.M.6
Walmsley, A.R.7
Sharples, G.J.8
-
145
-
-
54349118941
-
SSB as an organizer/mobilizer of genome maintenance complexes
-
Shereda RD, Kozlov AG, Lohman TM, Cox MM, Keck JL. 2008. SSB as an organizer/mobilizer of genome maintenance complexes. Crit Rev Biochem Mol Biol 43:289-318
-
(2008)
Crit Rev Biochem Mol Biol
, vol.43
, pp. 289-318
-
-
Shereda, R.D.1
Kozlov, A.G.2
Lohman, T.M.3
Cox, M.M.4
Keck, J.L.5
-
146
-
-
0000248223
-
Phage lambda's accessory genes
-
In Hendrix RW, Roberts JW, Stahl FW, Weisberg RA (ed), Cold Spring Harbor, Cold Spring Harbor, NY
-
Court D, Oppenheim AB. 1983. Phage lambda's accessory genes, p 251-277. In Hendrix RW, Roberts JW, Stahl FW, Weisberg RA (ed), Lambda II. Cold Spring Harbor, Cold Spring Harbor, NY
-
(1983)
Lambda II
, pp. 251-277
-
-
Court, D.1
Oppenheim, A.B.2
-
147
-
-
0023461426
-
Efficient RecABC-dependent, homologous recombination between coliphage lambda and plasmids requires a phage ninR region gene
-
Hollifield WC, Kaplan EN, Huang HV. 1987. Efficient RecABC-dependent, homologous recombination between coliphage lambda and plasmids requires a phage ninR region gene. Mol Gen Genet 210:248-255
-
(1987)
Mol Gen Genet
, vol.210
, pp. 248-255
-
-
Hollifield, W.C.1
Kaplan, E.N.2
Huang, H.V.3
-
148
-
-
0029871788
-
Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82
-
Mahdi AA, Sharples GJ, Mandal TN, Lloyd RG. 1996. Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82. J Mol Biol 257:561-573
-
(1996)
J Mol Biol
, vol.257
, pp. 561-573
-
-
Mahdi, A.A.1
Sharples, G.J.2
Mandal, T.N.3
Lloyd, R.G.4
-
149
-
-
0036330895
-
Recombinationpromoting activity of the bacteriophage lambda Rap protein in Escherichia coli K-12
-
Poteete AR, Fenton AC, Wang HR. 2002. Recombinationpromoting activity of the bacteriophage lambda Rap protein in Escherichia coli K-12. J Bacteriol 184:4626-4629
-
(2002)
J Bacteriol
, vol.184
, pp. 4626-4629
-
-
Poteete, A.R.1
Fenton, A.C.2
Wang, H.R.3
-
150
-
-
0020807942
-
Replacement and amplification of bacterial genes with sequences altered in vitro
-
Gutterson NI, Koshland DE, Jr. 1983. Replacement and amplification of bacterial genes with sequences altered in vitro. Proc Natl Acad Sci USA 80:4894-4898
-
(1983)
Proc Natl Acad Sci USA
, vol.80
, pp. 4894-4898
-
-
Gutterson, N.I.1
Koshland, D.E.2
-
151
-
-
0021136417
-
Construction and characterization of an Escherichia coli strain with a uncI mutation
-
Gay NJ. 1984. Construction and characterization of an Escherichia coli strain with a uncI mutation. J Bacteriol 158:820-825
-
(1984)
J Bacteriol
, vol.158
, pp. 820-825
-
-
Gay, N.J.1
-
152
-
-
0024340114
-
New method for generating deletions and gene replacements in Escherichia coli
-
Hamilton CM, Aldea M, Washburn BK, Babitzke P, Kushner SR. 1989. New method for generating deletions and gene replacements in Escherichia coli. J Bacteriol 171:4617-4622
-
(1989)
J Bacteriol
, vol.171
, pp. 4617-4622
-
-
Hamilton, C.M.1
Aldea, M.2
Washburn, B.K.3
Babitzke, P.4
Kushner, S.R.5
-
153
-
-
0027244750
-
Simple phage-based system for generating allele replacements in Escherichia coli
-
Slater S, Maurer R. 1993. Simple phage-based system for generating allele replacements in Escherichia coli. J Bacteriol 175:4260-4262
-
(1993)
J Bacteriol
, vol.175
, pp. 4260-4262
-
-
Slater, S.1
Maurer, R.2
-
154
-
-
0021150756
-
Deletion of an essential gene in Escherichia coli by site-specific recombination with linear DNA fragments
-
Jasin M, Schimmel P. 1984. Deletion of an essential gene in Escherichia coli by site-specific recombination with linear DNA fragments. J Bacteriol 159:783-786
-
(1984)
J Bacteriol
, vol.159
, pp. 783-786
-
-
Jasin, M.1
Schimmel, P.2
-
155
-
-
0021059966
-
Insertion mutations in the dam gene of Escherichia coli K-12
-
Marinus MG, Carraway M, Frey AZ, Brown L, Arraj JA. 1983. Insertion mutations in the dam gene of Escherichia coli K-12. Molec Gen Genet 191:288-289
-
(1983)
Molec Gen Genet
, vol.191
, pp. 288-289
-
-
Marinus, M.G.1
Carraway, M.2
Frey, A.Z.3
Brown, L.4
Arraj, J.A.5
-
156
-
-
0024582080
-
Chromosomal transformation of Escherichia coli recD strains with linearized plasmids
-
Russell CB, Thaler DS, Dahlquist FW. 1989. Chromosomal transformation of Escherichia coli recD strains with linearized plasmids. J Bacteriol 171:2609-2613
-
(1989)
J Bacteriol
, vol.171
, pp. 2609-2613
-
-
Russell, C.B.1
Thaler, D.S.2
Dahlquist, F.W.3
-
157
-
-
0021992336
-
Sitedirected insertion and deletion mutagenesis with cloned fragments in Escherichia coli
-
Winans SC, Elledge SJ, Krueger JH, Walker GC. 1985. Sitedirected insertion and deletion mutagenesis with cloned fragments in Escherichia coli. J Bacteriol 161:1219-1221
-
(1985)
J Bacteriol
, vol.161
, pp. 1219-1221
-
-
Winans, S.C.1
Elledge, S.J.2
Krueger, J.H.3
Walker, G.C.4
-
158
-
-
0028292327
-
Homologous genetic recombination: the pieces begin to fall into place
-
Clark AJ, Sandler SJ. 1994. Homologous genetic recombination: the pieces begin to fall into place. Crit Rev Microbiol 20:125-142
-
(1994)
Crit Rev Microbiol
, vol.20
, pp. 125-142
-
-
Clark, A.J.1
Sandler, S.J.2
-
159
-
-
0014852123
-
Biochemical and genetic studies of recombination proficiency in Escherichia coli. II. Rec+ revertants caused by indirect suppression of recmutations
-
Barbour SD, Nagaishi H, Templin A, Clark AJ. 1970. Biochemical and genetic studies of recombination proficiency in Escherichia coli. II. Rec+ revertants caused by indirect suppression of recmutations. Proc Natl Acad Sci USA 67:128-135
-
(1970)
Proc Natl Acad Sci USA
, vol.67
, pp. 128-135
-
-
Barbour, S.D.1
Nagaishi, H.2
Templin, A.3
Clark, A.J.4
-
160
-
-
0018721473
-
Physical characterisation of the "Rac prophage" in E. coli K12
-
Kaiser K, Murray NE. 1979. Physical characterisation of the "Rac prophage" in E. coli K12. Mol Gen Genet 175:159-174
-
(1979)
Mol Gen Genet
, vol.175
, pp. 159-174
-
-
Kaiser, K.1
Murray, N.E.2
-
161
-
-
0015921544
-
Restoration by the rac locus of recombinant forming ability in recB-and recC-merozygotes of Escherichia coli K-12
-
Low B. 1973. Restoration by the rac locus of recombinant forming ability in recB-and recC-merozygotes of Escherichia coli K-12. Mol Gen Genet 122:119-130
-
(1973)
Mol Gen Genet
, vol.122
, pp. 119-130
-
-
Low, B.1
-
162
-
-
0027376678
-
Genetic and molecular analyses of the C-terminal region of the recE gene from the Rac prophage of Escherichia coli K-12 reveal the recT gene
-
Clark AJ, Sharma V, Brenowitz S, Chu CC, Sandler S, Satin L, Templin A, Berger I, Cohen A. 1993. Genetic and molecular analyses of the C-terminal region of the recE gene from the Rac prophage of Escherichia coli K-12 reveal the recT gene. J Bacteriol 175:7673-7682
-
(1993)
J Bacteriol
, vol.175
, pp. 7673-7682
-
-
Clark, A.J.1
Sharma, V.2
Brenowitz, S.3
Chu, C.C.4
Sandler, S.5
Satin, L.6
Templin, A.7
Berger, I.8
Cohen, A.9
-
163
-
-
0037581065
-
Isolation of exonuclease VIII: the enzyme associated with sbcA indirect suppressor
-
Kushner SR, Nagaishi H, Clark AJ. 1974. Isolation of exonuclease VIII: the enzyme associated with sbcA indirect suppressor. Proc Natl Acad Sci USA 71:3593-3597
-
(1974)
Proc Natl Acad Sci USA
, vol.71
, pp. 3593-3597
-
-
Kushner, S.R.1
Nagaishi, H.2
Clark, A.J.3
-
164
-
-
0015360051
-
Indirect suppression of recB and recC mutations by exonuclease I deficiency
-
Kushner SR, Nagaishi H, Clark AJ. 1972. Indirect suppression of recB and recC mutations by exonuclease I deficiency. Proc Natl Acad Sci USA 69:1366-1370
-
(1972)
Proc Natl Acad Sci USA
, vol.69
, pp. 1366-1370
-
-
Kushner, S.R.1
Nagaishi, H.2
Clark, A.J.3
-
165
-
-
0015406705
-
Genetic analysis of mutations indirectly suppressing recB and recC mutations
-
Templin A, Kushner SR, Clark AJ. 1972. Genetic analysis of mutations indirectly suppressing recB and recC mutations. Genetics 72:105-115
-
(1972)
Genetics
, vol.72
, pp. 105-115
-
-
Templin, A.1
Kushner, S.R.2
Clark, A.J.3
-
166
-
-
0022345185
-
Identification and genetic analysis of sbcC mutations in commonly used recBC sbcB strains of Escherichia coli K-12
-
Lloyd RG, Buckman C. 1985. Identification and genetic analysis of sbcC mutations in commonly used recBC sbcB strains of Escherichia coli K-12. J Bacteriol 164:836-844
-
(1985)
J Bacteriol
, vol.164
, pp. 836-844
-
-
Lloyd, R.G.1
Buckman, C.2
-
167
-
-
0024441953
-
Molecular organization of sbcC, a gene that affects genetic recombination and the viability of DNA palindromes in Escherichia coli K-12
-
Naom IS, Morton SJ, Leach DRF, Lloyd RG. 1989. Molecular organization of sbcC, a gene that affects genetic recombination and the viability of DNA palindromes in Escherichia coli K-12. Nucl Acids Res 17:8033-8045
-
(1989)
Nucl Acids Res
, vol.17
, pp. 8033-8045
-
-
Naom, I.S.1
Morton, S.J.2
Leach, D.R.F.3
Lloyd, R.G.4
-
168
-
-
0030089480
-
The sbcC and sbcD genes of Escherichia coli encode a nuclease involved in palindrome inviability and genetic recombination
-
Connelly JC, Leach DR. 1996. The sbcC and sbcD genes of Escherichia coli encode a nuclease involved in palindrome inviability and genetic recombination. Genes Cells 1:285-291
-
(1996)
Genes Cells
, vol.1
, pp. 285-291
-
-
Connelly, J.C.1
Leach, D.R.2
-
169
-
-
0015817690
-
Genetic analysis of the recF pathway to genetic recombination in Escherichia coli K12: isolation and characterization of mutants
-
Houri Z, Clark AJ. 1973. Genetic analysis of the recF pathway to genetic recombination in Escherichia coli K12: isolation and characterization of mutants. J Mol Biol 80:327-344
-
(1973)
J Mol Biol
, vol.80
, pp. 327-344
-
-
Houri, Z.1
Clark, A.J.2
-
171
-
-
0021962878
-
Genetic recombination of bacterial plasmid DNA: effect of RecF pathway mutations on plasmid recombination in Escherichia coli
-
Kolodner R, Fishel RA, Howard M. 1985. Genetic recombination of bacterial plasmid DNA: effect of RecF pathway mutations on plasmid recombination in Escherichia coli. J Bacteriol 163:1060-1066
-
(1985)
J Bacteriol
, vol.163
, pp. 1060-1066
-
-
Kolodner, R.1
Fishel, R.A.2
Howard, M.3
-
172
-
-
0035902521
-
Participation of recombination proteins in rescue of arrested replication forks in UV-irradiated Escherichia coli need not involve recombination
-
Courcelle J, Hanawalt PC. 2001. Participation of recombination proteins in rescue of arrested replication forks in UV-irradiated Escherichia coli need not involve recombination. Proc Natl Acad Sci USA 98:8196-8202
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8196-8202
-
-
Courcelle, J.1
Hanawalt, P.C.2
-
173
-
-
0035679232
-
Recombinational DNA repair of damaged replication forks in Escherichia coli: questions
-
Cox MM. 2001. Recombinational DNA repair of damaged replication forks in Escherichia coli: questions. Annu Rev Genet 35:53-82
-
(2001)
Annu Rev Genet
, vol.35
, pp. 53-82
-
-
Cox, M.M.1
-
174
-
-
0036267593
-
Replication restart in UV-irradiated Escherichia coli involving pols II, III, V, PriA, RecA and RecFOR proteins
-
Rangarajan S, Woodgate R, Goodman MF. 2002. Replication restart in UV-irradiated Escherichia coli involving pols II, III, V, PriA, RecA and RecFOR proteins. Mol Microbiol 43:617-628
-
(2002)
Mol Microbiol
, vol.43
, pp. 617-628
-
-
Rangarajan, S.1
Woodgate, R.2
Goodman, M.F.3
-
175
-
-
33750479057
-
sbcB15 and DeltasbcB mutations activate two types of recf recombination pathways in Escherichia coli
-
Zahradka K, Simic S, Buljubasic M, Petranovic M, Dermic D, Zahradka D. 2006. sbcB15 and DeltasbcB mutations activate two types of recf recombination pathways in Escherichia coli. J Bacteriol 188:7562-7571
-
(2006)
J Bacteriol
, vol.188
, pp. 7562-7571
-
-
Zahradka, K.1
Simic, S.2
Buljubasic, M.3
Petranovic, M.4
Dermic, D.5
Zahradka, D.6
-
176
-
-
37549057335
-
Effects of singlestrand DNases ExoI, RecJ, ExoVII, and SbcCD on homologous recombination of recBCD+ strains of Escherichia coli and roles of SbcB15 and XonA2 ExoI mutant enzymes
-
Thoms B, Borchers I, Wackernagel W. 2008. Effects of singlestrand DNases ExoI, RecJ, ExoVII, and SbcCD on homologous recombination of recBCD+ strains of Escherichia coli and roles of SbcB15 and XonA2 ExoI mutant enzymes. J Bacteriol 190:179-192
-
(2008)
J Bacteriol
, vol.190
, pp. 179-192
-
-
Thoms, B.1
Borchers, I.2
Wackernagel, W.3
-
177
-
-
0024041533
-
Construction of an Escherichia coli K-12 ada deletion by gene replacement in a recD strain reveals a second methyltransferase that repairs alkylated DNA
-
Shevell DE, Abou-Zamzam AM, Demple B, Walker GC. 1988. Construction of an Escherichia coli K-12 ada deletion by gene replacement in a recD strain reveals a second methyltransferase that repairs alkylated DNA. J Bacteriol 170:3294-3296
-
(1988)
J Bacteriol
, vol.170
, pp. 3294-3296
-
-
Shevell, D.E.1
Abou-Zamzam, A.M.2
Demple, B.3
Walker, G.C.4
-
179
-
-
0014966697
-
A recombination function essential to the growth of bacteriophage P22
-
Botstein D, Matz MJ. 1970. A recombination function essential to the growth of bacteriophage P22. J Mol Biol 54:417-440
-
(1970)
J Mol Biol
, vol.54
, pp. 417-440
-
-
Botstein, D.1
Matz, M.J.2
-
180
-
-
0031006470
-
Single-strand DNA intermediates in phage ?'s Red recombination pathway
-
Hill SA, Stahl MM, Stahl FW. 1997. Single-strand DNA intermediates in phage ?'s Red recombination pathway. Proc Natl Acad Sci USA 94:2951-2956
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 2951-2956
-
-
Hill, S.A.1
Stahl, M.M.2
Stahl, F.W.3
-
181
-
-
0031664853
-
A new logic for DNA engineering using recombination in Escherichia coli
-
Zhang Y, Buchholz F, Muyrers JP, Stewart AF. 1998. A new logic for DNA engineering using recombination in Escherichia coli. Nat Genet 20:123-128
-
(1998)
Nat Genet
, vol.20
, pp. 123-128
-
-
Zhang, Y.1
Buchholz, F.2
Muyrers, J.P.3
Stewart, A.F.4
-
182
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko KA, Wanner BL. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97:6640-6645
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
183
-
-
1942480531
-
Lambda Red-mediated recombinogenic engineering of enterohemorrhagic and enteropathogenic E. coli
-
Murphy KC, Campellone KG. 2003. Lambda Red-mediated recombinogenic engineering of enterohemorrhagic and enteropathogenic E. coli. BMC Mol Biol 4:11. doi:10.1186/1471-2199-4-11
-
(2003)
BMC Mol Biol
, vol.4
, pp. 11
-
-
Murphy, K.C.1
Campellone, K.G.2
-
184
-
-
0034705144
-
An efficient recombination system for chromosome engineering in Escherichia coli
-
Yu D, Ellis HM, Lee EC, Jenkins NA, Copeland NG, Court DL. 2000. An efficient recombination system for chromosome engineering in Escherichia coli. Proc Natl Acad Sci USA 97:5978-5983
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 5978-5983
-
-
Yu, D.1
Ellis, H.M.2
Lee, E.C.3
Jenkins, N.A.4
Copeland, N.G.5
Court, D.L.6
-
185
-
-
0027237665
-
A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae
-
Baudin A, Ozier-Kalogeropoulos O, Denouel A, Lacroute F, Cullen C. 1993. A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae. Nucleic Acid Res 21:3329-3330
-
(1993)
Nucleic Acid Res
, vol.21
, pp. 3329-3330
-
-
Baudin, A.1
Ozier-Kalogeropoulos, O.2
Denouel, A.3
Lacroute, F.4
Cullen, C.5
-
186
-
-
0029042961
-
Gene disruption with PCR products in Saccharomyces cerevisiae
-
Lorenz MC, Muir RS, Lim E, McElver J, Weber SC, Heitman J. 1995. Gene disruption with PCR products in Saccharomyces cerevisiae. Gene 158:113-117
-
(1995)
Gene
, vol.158
, pp. 113-117
-
-
Lorenz, M.C.1
Muir, R.S.2
Lim, E.3
McElver, J.4
Weber, S.C.5
Heitman, J.6
-
187
-
-
0028676232
-
New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae
-
Wach A, Brachat A, Pohlmann R, Philippsen P. 1994. New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae. Yeast 10:1793-1808
-
(1994)
Yeast
, vol.10
, pp. 1793-1808
-
-
Wach, A.1
Brachat, A.2
Pohlmann, R.3
Philippsen, P.4
-
188
-
-
0035810938
-
High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides
-
Ellis HM, Yu D, DiTizio T, Court DL. 2001. High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides. Proc Natl Acad Sci USA 98:6742-6746
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 6742-6746
-
-
Ellis, H.M.1
Yu, D.2
DiTizio, T.3
Court, D.L.4
-
189
-
-
0035487293
-
Recombineering: a powerful new tool for mouse functional genomics
-
Copeland NG, Jenkins NA, Court DL. 2001. Recombineering: a powerful new tool for mouse functional genomics. Nat Rev Genet 2:769-779
-
(2001)
Nat Rev Genet
, vol.2
, pp. 769-779
-
-
Copeland, N.G.1
Jenkins, N.A.2
Court, D.L.3
-
190
-
-
33747333128
-
A set of recombineering plasmids for gram-negative bacteria
-
Datta S, Costantino N, Court DL. 2006. A set of recombineering plasmids for gram-negative bacteria. Gene 379:109-115
-
(2006)
Gene
, vol.379
, pp. 109-115
-
-
Datta, S.1
Costantino, N.2
Court, D.L.3
-
191
-
-
0020575693
-
Cloning structural gene sacB, which codes for exoenzyme levansucrase of Bacillus subtilis: expression of the gene in Escherichia coli
-
Gay P, LeCoq D, Steinmetz M, Ferrari E, Hoch J. 1983. Cloning structural gene sacB, which codes for exoenzyme levansucrase of Bacillus subtilis: expression of the gene in Escherichia coli. J Bacteriol 153:1424-1431
-
(1983)
J Bacteriol
, vol.153
, pp. 1424-1431
-
-
Gay, P.1
LeCoq, D.2
Steinmetz, M.3
Ferrari, E.4
Hoch, J.5
-
192
-
-
0034668869
-
A rapid method for efficient gene replacement in the filamentous fungus Aspergillus nidulans
-
Chaveroche MK, Ghigo JM, d'Enfert C. 2000. A rapid method for efficient gene replacement in the filamentous fungus Aspergillus nidulans. Nucleic Acids Res 28:e97. doi:10.1093/nar/28.22.e97
-
(2000)
Nucleic Acids Res
, vol.28
-
-
Chaveroche, M.K.1
Ghigo, J.M.2
d'Enfert, C.3
-
193
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
-
2006.0008
-
Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H. 2006. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2:2006.0008. doi:10.1038/msb4100050
-
(2006)
Mol Syst Biol
, vol.2
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
Datsenko, K.A.7
Tomita, M.8
Wanner, B.L.9
Mori, H.10
-
194
-
-
68949161807
-
Programming cells by multiplex genome engineering and accelerated evolution
-
Wang HH, Isaacs FJ, Carr PA, Sun ZZ, Xu G, Forest CR, Church GM. 2009. Programming cells by multiplex genome engineering and accelerated evolution. Nature 460:894-898
-
(2009)
Nature
, vol.460
, pp. 894-898
-
-
Wang, H.H.1
Isaacs, F.J.2
Carr, P.A.3
Sun, Z.Z.4
Xu, G.5
Forest, C.R.6
Church, G.M.7
-
195
-
-
79957439984
-
Modified bases enable high-efficiency oligonucleotide-mediated allelic replacement via mismatch repair evasion
-
Wang HH, Xu G, Vonner AJ, Church G. 2011. Modified bases enable high-efficiency oligonucleotide-mediated allelic replacement via mismatch repair evasion. Nucleic Acids Res 39:7336-7347
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 7336-7347
-
-
Wang, H.H.1
Xu, G.2
Vonner, A.J.3
Church, G.4
-
196
-
-
0030571482
-
Characterization of the DNA-binding domain of beta protein, a component of phage lambda red-pathway, by UV catalyzed cross-linking
-
Mythili E, Kumar KA, Muniyappa K. 1996. Characterization of the DNA-binding domain of beta protein, a component of phage lambda red-pathway, by UV catalyzed cross-linking. Gene 182: 81-87
-
(1996)
Gene
, vol.182
, pp. 81-87
-
-
Mythili, E.1
Kumar, K.A.2
Muniyappa, K.3
-
198
-
-
0026704096
-
Strand-specificity in the transformation of yeast with synthetic oligonucleotides
-
Yamamoto T, Moerschell RP, Wakem LP, Komar-Panicucci S, Sherman F. 1992. Strand-specificity in the transformation of yeast with synthetic oligonucleotides. Genetics 131:811-819
-
(1992)
Genetics
, vol.131
, pp. 811-819
-
-
Yamamoto, T.1
Moerschell, R.P.2
Wakem, L.P.3
Komar-Panicucci, S.4
Sherman, F.5
-
199
-
-
0036097061
-
Strand bias in targeted gene repair is influenced by transcriptional activity
-
Liu L, Rice MC, Drury M, Cheng S, Gamper H, Kmiec EB. 2002. Strand bias in targeted gene repair is influenced by transcriptional activity. Mol Cell Biol 22:3852-3863
-
(2002)
Mol Cell Biol
, vol.22
, pp. 3852-3863
-
-
Liu, L.1
Rice, M.C.2
Drury, M.3
Cheng, S.4
Gamper, H.5
Kmiec, E.B.6
-
200
-
-
36949003720
-
Progress and prospects: targeted gene alteration (TGA)
-
Parekh-Olmedo H, Kmiec EB. 2007. Progress and prospects: targeted gene alteration (TGA). Gene Ther 14:1675-1680
-
(2007)
Gene Ther
, vol.14
, pp. 1675-1680
-
-
Parekh-Olmedo, H.1
Kmiec, E.B.2
-
202
-
-
85045497108
-
Mismatch amplification mutation assay (MAMA): application to the c-H-ras gene
-
Cha RS, Zarbl H, Keohavong P, Thilly WG. 1992. Mismatch amplification mutation assay (MAMA): application to the c-H-ras gene. PCR Methods Appl 2:14-20
-
(1992)
PCR Methods Appl
, vol.2
, pp. 14-20
-
-
Cha, R.S.1
Zarbl, H.2
Keohavong, P.3
Thilly, W.G.4
-
203
-
-
0035135652
-
Rapid engineering of bacterial artificial chromosomes using oligonucleotides
-
Swaminathan S, Ellis HM, Waters LS, Yu D, Lee EC, Court DL, Sharan SK. 2001. Rapid engineering of bacterial artificial chromosomes using oligonucleotides. Genesis 29:14-21
-
(2001)
Genesis
, vol.29
, pp. 14-21
-
-
Swaminathan, S.1
Ellis, H.M.2
Waters, L.S.3
Yu, D.4
Lee, E.C.5
Court, D.L.6
Sharan, S.K.7
-
205
-
-
0024596295
-
Methyl-directed DNA mismatch correction
-
Modrich P. 1989. Methyl-directed DNA mismatch correction. J Biol Chem 264:6597-6600
-
(1989)
J Biol Chem
, vol.264
, pp. 6597-6600
-
-
Modrich, P.1
-
206
-
-
0346103663
-
Enhanced levels of lambda Redmediated recombinants in mismatch repair mutants
-
Costantino N, Court DL. 2003. Enhanced levels of lambda Redmediated recombinants in mismatch repair mutants. Proc Natl Acad Sci USA 100:15748-15753
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 15748-15753
-
-
Costantino, N.1
Court, D.L.2
-
207
-
-
0026536644
-
Repair of DNA heteroduplexes containing small heterologous sequences in Escherichia coli
-
Parker BO, Marinus MG. 1992. Repair of DNA heteroduplexes containing small heterologous sequences in Escherichia coli. Proc Natl Acad Sci USA 89:1730-1734
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 1730-1734
-
-
Parker, B.O.1
Marinus, M.G.2
-
208
-
-
0041660878
-
A simple two-step, 'hit and fix' method to generate subtle mutations in BACs using short denatured PCR fragments
-
Yang Y, Sharan SK. 2003. A simple two-step, 'hit and fix' method to generate subtle mutations in BACs using short denatured PCR fragments. Nucleic Acids Res 31:e80. doi:10.1093/nar/gng080
-
(2003)
Nucleic Acids Res
, vol.31
-
-
Yang, Y.1
Sharan, S.K.2
-
209
-
-
84878390744
-
Bacterial DNA polymerases participate in oligonucleotide recombination
-
Li XT, Thomason LC, Sawitzke JA, Costantino N, Court DL. 2013. Bacterial DNA polymerases participate in oligonucleotide recombination. Mol Microbiol 88:906-920
-
(2013)
Mol Microbiol
, vol.88
, pp. 906-920
-
-
Li, X.T.1
Thomason, L.C.2
Sawitzke, J.A.3
Costantino, N.4
Court, D.L.5
-
210
-
-
84879236720
-
Involvement of DNA replication proteins in phage lambda red-mediated homologous recombination
-
Poteete AR. 2013. Involvement of DNA replication proteins in phage lambda red-mediated homologous recombination. PLoS One 8:e67440. doi:10.1371/journal.pone.0067440
-
(2013)
PLoS One
, vol.8
-
-
Poteete, A.R.1
-
211
-
-
0014962991
-
A possible function of DNA polymerase in chromosome replication
-
Kuempel PL, Veomett GE. 1970. A possible function of DNA polymerase in chromosome replication. Biochem Biophys Res Commun 41:973-980
-
(1970)
Biochem Biophys Res Commun
, vol.41
, pp. 973-980
-
-
Kuempel, P.L.1
Veomett, G.E.2
-
212
-
-
0017088047
-
DNA polymerase I: essential replication enzyme
-
Lehman IR, Uyemura DG. 1976. DNA polymerase I: essential replication enzyme. Science 193:963-969
-
(1976)
Science
, vol.193
, pp. 963-969
-
-
Lehman, I.R.1
Uyemura, D.G.2
-
213
-
-
0015184718
-
Slow joining of newly replicated DNA chains in DNA polymerase I-deficient Escherichia coli mutants
-
Okazaki R, Arisawa M, Sugino A. 1971. Slow joining of newly replicated DNA chains in DNA polymerase I-deficient Escherichia coli mutants. Proc Natl Acad Sci USA 68:2954-2957
-
(1971)
Proc Natl Acad Sci USA
, vol.68
, pp. 2954-2957
-
-
Okazaki, R.1
Arisawa, M.2
Sugino, A.3
-
214
-
-
0025122284
-
Processive replication is contingent on the exonuclease subunit of DNA polymerase III holoenzyme
-
Studwell PS, O'Donnell M. 1990. Processive replication is contingent on the exonuclease subunit of DNA polymerase III holoenzyme. J Biol Chem 265:1171-1178
-
(1990)
J Biol Chem
, vol.265
, pp. 1171-1178
-
-
Studwell, P.S.1
O'Donnell, M.2
-
215
-
-
79952002951
-
Probing cellular processes with oligomediated recombination and using the knowledge gained to optimize recombineering
-
Sawitzke JA, Costantino N, Li XT, Thomason LC, Bubunenko M, Court C, Court DL. 2011. Probing cellular processes with oligomediated recombination and using the knowledge gained to optimize recombineering. J Mol Biol 407:45-59
-
(2011)
J Mol Biol
, vol.407
, pp. 45-59
-
-
Sawitzke, J.A.1
Costantino, N.2
Li, X.T.3
Thomason, L.C.4
Bubunenko, M.5
Court, C.6
Court, D.L.7
-
216
-
-
72949112229
-
Oligonucleotide recombination in Gram-negative bacteria
-
Swingle B, Markel E, Costantino N, Bubunenko MG, Cartinhour S, Court DL. 2009. Oligonucleotide recombination in Gram-negative bacteria. Mol Microbiol 75:138-148
-
(2009)
Mol Microbiol
, vol.75
, pp. 138-148
-
-
Swingle, B.1
Markel, E.2
Costantino, N.3
Bubunenko, M.G.4
Cartinhour, S.5
Court, D.L.6
-
217
-
-
33846083163
-
RecA-independent recombination is efficient but limited by exonucleases
-
Dutra BE, Sutera VA, Jr, Lovett ST. 2007. RecA-independent recombination is efficient but limited by exonucleases. Proc Natl Acad Sci USA 104:216-221
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 216-221
-
-
Dutra, B.E.1
Sutera, V.A.2
Lovett, S.T.3
-
218
-
-
79953044456
-
Oligonucleotides stimulate genomic alterations of Legionella pneumophila
-
BryanA, Swanson MS. 2011. Oligonucleotides stimulate genomic alterations of Legionella pneumophila. Mol Microbiol 80:231-247
-
(2011)
Mol Microbiol
, vol.80
, pp. 231-247
-
-
Bryan, A.1
Swanson, M.S.2
-
219
-
-
0346503889
-
Talking about a revolution: the impact of site-specific recombinases on genetic analyses in mice
-
Branda CS, Dymecki SM. 2004. Talking about a revolution: the impact of site-specific recombinases on genetic analyses in mice. Dev Cell 6:7-28
-
(2004)
Dev Cell
, vol.6
, pp. 7-28
-
-
Branda, C.S.1
Dymecki, S.M.2
-
220
-
-
0242475333
-
Cre-lox recombination: Cre-ative tools for plant biotechnology
-
Gilbertson L. 2003. Cre-lox recombination: Cre-ative tools for plant biotechnology. Trends Biotechnol 21:550-555
-
(2003)
Trends Biotechnol
, vol.21
, pp. 550-555
-
-
Gilbertson, L.1
-
221
-
-
77957219734
-
A bacterial model system for chromosomal targeting
-
Huang LC, Wood EA, Cox MM. 1991. A bacterial model system for chromosomal targeting. Nucleic Acids Res 19:443-448
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 443-448
-
-
Huang, L.C.1
Wood, E.A.2
Cox, M.M.3
-
222
-
-
0030883633
-
Convenient and reversible site-specific targeting of exogenous DNA into a bacterial chromosome by use of the FLP recombinase: the FLIRT system
-
Huang LC, Wood EA, Cox MM. 1997. Convenient and reversible site-specific targeting of exogenous DNA into a bacterial chromosome by use of the FLP recombinase: the FLIRT system. J Bacteriol 179:6076-6083
-
(1997)
J Bacteriol
, vol.179
, pp. 6076-6083
-
-
Huang, L.C.1
Wood, E.A.2
Cox, M.M.3
-
224
-
-
0042196461
-
Applications of the Saccharomyces cerevisiae Flp-FRT systemin bacterial genetics
-
Schweizer HP. 2003. Applications of the Saccharomyces cerevisiae Flp-FRT systemin bacterial genetics. JMol Microbiol Biotechnol 5:67-77
-
(2003)
JMol Microbiol Biotechnol
, vol.5
, pp. 67-77
-
-
Schweizer, H.P.1
-
225
-
-
0033650166
-
Application of Cre/loxP in Drosophila. Site-specific recombination and transgene coplacement
-
Siegal ML, Hartl DL. 2000. Application of Cre/loxP in Drosophila. Site-specific recombination and transgene coplacement. Methods Mol Biol 136:487-495
-
(2000)
Methods Mol Biol
, vol.136
, pp. 487-495
-
-
Siegal, M.L.1
Hartl, D.L.2
-
226
-
-
0034059140
-
Cre recombinase: the universal reagent for genome tailoring
-
Nagy A. 2000. Cre recombinase: the universal reagent for genome tailoring. Genesis 26:99-109
-
(2000)
Genesis
, vol.26
, pp. 99-109
-
-
Nagy, A.1
-
227
-
-
84890368234
-
Positive and negative selection using the tetA-sacB cassette: recombineering and P1 transduction in Escherichia coli
-
Li XT, Thomason LC, Sawitzke JA, Costantino N, Court DL. 2013. Positive and negative selection using the tetA-sacB cassette: recombineering and P1 transduction in Escherichia coli. Nucleic Acids Res 41:e204. doi:10.1093/nar/gkt1075
-
(2013)
Nucleic Acids Res
, vol.41
-
-
Li, X.T.1
Thomason, L.C.2
Sawitzke, J.A.3
Costantino, N.4
Court, D.L.5
-
228
-
-
28644449037
-
Efficient and seamless DNA recombineering using a thymidylate synthase A selection system in Escherichia coli
-
Wong QN, Ng VC, Lin MC, Kung HF, Chan D, Huang JD. 2005. Efficient and seamless DNA recombineering using a thymidylate synthase A selection system in Escherichia coli. Nucleic Acids Res 33: e59. doi:10.1093/nar/gni059
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Wong, Q.N.1
Ng, V.C.2
Lin, M.C.3
Kung, H.F.4
Chan, D.5
Huang, J.D.6
-
229
-
-
26644453335
-
Simple and highly efficient BAC recombineering using galK selection
-
Warming S, Costantino N, Court DL, Jenkins NA, Copeland NG. 2005. Simple and highly efficient BAC recombineering using galK selection. Nucleic Acids Res 33:e36. doi:10.1093/nar/gni035
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Warming, S.1
Costantino, N.2
Court, D.L.3
Jenkins, N.A.4
Copeland, N.G.5
-
230
-
-
84857682336
-
Back to BAC: the use of infectious clone technologies for viral mutagenesis
-
Hall RN, Meers J, Fowler E, Mahony T. 2012. Back to BAC: the use of infectious clone technologies for viral mutagenesis. Viruses 4:211-235
-
(2012)
Viruses
, vol.4
, pp. 211-235
-
-
Hall, R.N.1
Meers, J.2
Fowler, E.3
Mahony, T.4
-
231
-
-
78349305027
-
An improved counterselectable marker system for mycobacterial recombination using galK and 2-deoxy-galactose
-
Barkan D, Stallings CL, Glickman MS. 2011. An improved counterselectable marker system for mycobacterial recombination using galK and 2-deoxy-galactose. Gene 470:31-36
-
(2011)
Gene
, vol.470
, pp. 31-36
-
-
Barkan, D.1
Stallings, C.L.2
Glickman, M.S.3
-
232
-
-
43149090031
-
Simple generation of site-directed point mutations in the Escherichia coli chromosome using Red(R)/ET(R) recombination
-
Heermann R, Zeppenfeld T, Jung K. 2008. Simple generation of site-directed point mutations in the Escherichia coli chromosome using Red(R)/ET(R) recombination. Microb Cell Fact 7:14. doi:10.1186/1475-2859-7-14
-
(2008)
Microb Cell Fact
, vol.7
, pp. 14
-
-
Heermann, R.1
Zeppenfeld, T.2
Jung, K.3
-
233
-
-
0035865028
-
Synergy between tetA and rpsL provides high-stringency positive and negative selection in bacterial artificial chromosome vectors
-
Stavropoulos TA, Strathdee CA. 2001. Synergy between tetA and rpsL provides high-stringency positive and negative selection in bacterial artificial chromosome vectors. Genomics 72:99-104
-
(2001)
Genomics
, vol.72
, pp. 99-104
-
-
Stavropoulos, T.A.1
Strathdee, C.A.2
-
234
-
-
0014137931
-
Genetics and physiology of colicin-tolerant mutants of Escherichia coli
-
Nagel de Zwaig R, Luria SE. 1967. Genetics and physiology of colicin-tolerant mutants of Escherichia coli. J Bacteriol 94:1112-1123
-
(1967)
J Bacteriol
, vol.94
, pp. 1112-1123
-
-
Nagel de Zwaig, R.1
Luria, S.E.2
-
235
-
-
38349115643
-
Recombineering with tolC as a selectable/counter-selectable marker: remodeling the rRNA operons of Escherichia coli
-
DeVito JA. 2008. Recombineering with tolC as a selectable/counter-selectable marker: remodeling the rRNA operons of Escherichia coli. Nucleic Acids Res 36:e4. doi:10.1093/nar/gkm1084
-
(2008)
Nucleic Acids Res
, vol.36
-
-
DeVito, J.A.1
-
236
-
-
0028180877
-
pKSS-a second-generation general purpose cloning vector for efficient positive selection of recombinant clones
-
Kast P. 1994. pKSS-a second-generation general purpose cloning vector for efficient positive selection of recombinant clones. Gene 138:109-114
-
(1994)
Gene
, vol.138
, pp. 109-114
-
-
Kast, P.1
-
237
-
-
0026015417
-
Amino acid substrate specificity of Escherichia coli phenylalanyl-tRNA synthetase altered by distinct mutations
-
Kast P, Hennecke H. 1991. Amino acid substrate specificity of Escherichia coli phenylalanyl-tRNA synthetase altered by distinct mutations. J Mol Biol 222:99-124
-
(1991)
J Mol Biol
, vol.222
, pp. 99-124
-
-
Kast, P.1
Hennecke, H.2
-
238
-
-
15044348273
-
MAGIC, an in vivo genetic method for the rapid construction of recombinant DNA molecules
-
Li MZ, Elledge SJ. 2005. MAGIC, an in vivo genetic method for the rapid construction of recombinant DNA molecules. Nat Genet 37:311-319
-
(2005)
Nat Genet
, vol.37
, pp. 311-319
-
-
Li, M.Z.1
Elledge, S.J.2
-
239
-
-
84898949923
-
Improved seamless mutagenesis by recombineering using ccdB for counterselection
-
Wang H, Bian X, Xia L, Ding X, Muller R, Zhang Y, Fu J, Stewart AF. 2013. Improved seamless mutagenesis by recombineering using ccdB for counterselection. Nucleic Acids Res 42:e37. doi:10.1093/nar/gkt1339
-
(2013)
Nucleic Acids Res
, vol.42
-
-
Wang, H.1
Bian, X.2
Xia, L.3
Ding, X.4
Muller, R.5
Zhang, Y.6
Fu, J.7
Stewart, A.F.8
-
240
-
-
84856436841
-
High-efficiency counterselection recombineering for site-directed mutagenesis in bacterial artificial chromosomes
-
Bird AW, Erler A, Fu J, Heriche JK, Maresca M, Zhang Y, Hyman AA, Stewart AF. 2011. High-efficiency counterselection recombineering for site-directed mutagenesis in bacterial artificial chromosomes. Nat Methods 9:103-109
-
(2011)
Nat Methods
, vol.9
, pp. 103-109
-
-
Bird, A.W.1
Erler, A.2
Fu, J.3
Heriche, J.K.4
Maresca, M.5
Zhang, Y.6
Hyman, A.A.7
Stewart, A.F.8
-
241
-
-
70349145309
-
DNA breakage associated with targeted gene alteration directed by DNA oligonucleotides
-
Bonner M, Kmiec EB. 2009. DNA breakage associated with targeted gene alteration directed by DNA oligonucleotides. Mutat Res 669:85-94
-
(2009)
Mutat Res
, vol.669
, pp. 85-94
-
-
Bonner, M.1
Kmiec, E.B.2
-
242
-
-
0037352031
-
A highly efficient recombineering-based method for generating conditional knockout mutations
-
Liu P, Jenkins NA, Copeland NG. 2003. A highly efficient recombineering-based method for generating conditional knockout mutations. Genome Res 13:476-484
-
(2003)
Genome Res
, vol.13
, pp. 476-484
-
-
Liu, P.1
Jenkins, N.A.2
Copeland, N.G.3
-
243
-
-
33947357684
-
Recombineering in Mycobacterium tuberculosis
-
van Kessel JC, Hatfull GF. 2007. Recombineering in Mycobacterium tuberculosis. Nat Methods 4:147-152
-
(2007)
Nat Methods
, vol.4
, pp. 147-152
-
-
van Kessel, J.C.1
Hatfull, G.F.2
-
244
-
-
0036787648
-
Minimization of the Escherichia coli genome using a Tn5-targeted Cre/loxP excision system
-
Yu BJ, Sung BH, Koob MD, Lee CH, Lee JH, Lee WS, Kim MS, Kim SC. 2002. Minimization of the Escherichia coli genome using a Tn5-targeted Cre/loxP excision system. Nat Biotechnol 20:1018-1023
-
(2002)
Nat Biotechnol
, vol.20
, pp. 1018-1023
-
-
Yu, B.J.1
Sung, B.H.2
Koob, M.D.3
Lee, C.H.4
Lee, J.H.5
Lee, W.S.6
Kim, M.S.7
Kim, S.C.8
-
245
-
-
2342505688
-
An improved method for deleting large regions of Escherichia coli K-12 chromosome using a combination of Cre/loxP and lambda Red
-
Fukiya S, Mizoguchi H, Mori H. 2004. An improved method for deleting large regions of Escherichia coli K-12 chromosome using a combination of Cre/loxP and lambda Red. FEMS Microbiol Lett 234:325-331
-
(2004)
FEMS Microbiol Lett
, vol.234
, pp. 325-331
-
-
Fukiya, S.1
Mizoguchi, H.2
Mori, H.3
-
246
-
-
0034603783
-
PCR-mediated gene replacement in Escherichia coli
-
Murphy KC, Campellone KG, Poteete AR. 2000. PCR-mediated gene replacement in Escherichia coli. Gene 246:321-330
-
(2000)
Gene
, vol.246
, pp. 321-330
-
-
Murphy, K.C.1
Campellone, K.G.2
Poteete, A.R.3
-
247
-
-
0023472541
-
An nptI-sacB-sacR cartridge for constructing directed, unmarked mutations in Gram-negative bacteria by marker exchange-eviction mutagenesis
-
Ried JL, Collmer A. 1987. An nptI-sacB-sacR cartridge for constructing directed, unmarked mutations in Gram-negative bacteria by marker exchange-eviction mutagenesis. Gene 57:239-246
-
(1987)
Gene
, vol.57
, pp. 239-246
-
-
Ried, J.L.1
Collmer, A.2
-
248
-
-
0028211009
-
PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates
-
Barnes WM. 1994. PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates. Proc Natl Acad Sci USA 91:2216-2220
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 2216-2220
-
-
Barnes, W.M.1
-
249
-
-
0028261194
-
Effective amplification of long targets from cloned inserts and human genomic DNA
-
Cheng S, Fockler C, Barnes WM, Higuchi R. 1994. Effective amplification of long targets from cloned inserts and human genomic DNA. Proc Natl Acad Sci USA 91:5695-5699
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 5695-5699
-
-
Cheng, S.1
Fockler, C.2
Barnes, W.M.3
Higuchi, R.4
-
250
-
-
0345504146
-
Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome
-
Posfai G, Kolisnychenko V, Bereczki Z, Blattner FR. 1999. Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome. Nucleic Acids Res 27:4409-4415
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 4409-4415
-
-
Posfai, G.1
Kolisnychenko, V.2
Bereczki, Z.3
Blattner, F.R.4
-
251
-
-
0036228521
-
Engineering a reduced Escherichia coli genome
-
Kolisnychenko V, Plunkett G, 3rd, Herring CD, Feher T, Posfai J, Blattner FR, Posfai G. 2002. Engineering a reduced Escherichia coli genome. Genome Res 12:640-647
-
(2002)
Genome Res
, vol.12
, pp. 640-647
-
-
Kolisnychenko, V.1
Plunkett, G.2
Herring, C.D.3
Feher, T.4
Posfai, J.5
Blattner, F.R.6
Posfai, G.7
-
252
-
-
0025357616
-
Purification and characterization of the in vitro activity of I-Sce I, a novel and highly specific endonuclease encoded by a group I intron
-
Monteilhet C, Perrin A, Thierry A, Colleaux L, Dujon B. 1990. Purification and characterization of the in vitro activity of I-Sce I, a novel and highly specific endonuclease encoded by a group I intron. Nucleic Acids Res 18:1407-1413
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 1407-1413
-
-
Monteilhet, C.1
Perrin, A.2
Thierry, A.3
Colleaux, L.4
Dujon, B.5
-
253
-
-
0037633360
-
Gene replacement without selection: regulated suppression of amber mutations in Escherichia coli
-
Herring CD, Glasner JD, Blattner FR. 2003. Gene replacement without selection: regulated suppression of amber mutations in Escherichia coli. Gene 311:153-163
-
(2003)
Gene
, vol.311
, pp. 153-163
-
-
Herring, C.D.1
Glasner, J.D.2
Blattner, F.R.3
-
254
-
-
1942507982
-
Conditional lethal amber mutations in essential Escherichia coli genes
-
Herring CD, Blattner FR. 2004. Conditional lethal amber mutations in essential Escherichia coli genes. J Bacteriol 186:2673-2681
-
(2004)
J Bacteriol
, vol.186
, pp. 2673-2681
-
-
Herring, C.D.1
Blattner, F.R.2
-
255
-
-
34250802076
-
Assisted large fragment insertion by Red/ET-recombination (ALFIRE)-an alternative and enhanced method for large fragment recombineering
-
Rivero-Muller A, Lajic S, Huhtaniemi I. 2007. Assisted large fragment insertion by Red/ET-recombination (ALFIRE)-an alternative and enhanced method for large fragment recombineering. Nucleic Acids Res 35:e78. doi:10.1093/nar/gkm250
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Rivero-Muller, A.1
Lajic, S.2
Huhtaniemi, I.3
-
256
-
-
33645053126
-
Two-step red-mediated recombination for versatile high-efficiency markerless DNA manipulation in Escherichia coli
-
Tischer BK, von Einem J, Kaufer B, Osterrieder N. 2006. Two-step red-mediated recombination for versatile high-efficiency markerless DNA manipulation in Escherichia coli. Biotechniques 40:191-197
-
(2006)
Biotechniques
, vol.40
, pp. 191-197
-
-
Tischer, B.K.1
von Einem, J.2
Kaufer, B.3
Osterrieder, N.4
-
258
-
-
0027324235
-
Rapid cloning by homologous recombination in vivo
-
Bubeck P, Winkler M, Bautsch W. 1993. Rapid cloning by homologous recombination in vivo. Nucleic Acids Res 21:3601-3602
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 3601-3602
-
-
Bubeck, P.1
Winkler, M.2
Bautsch, W.3
-
260
-
-
0014961179
-
DNA polymerase as a requirement for the maintenance of the bacterial plasmid colicinogenic factor E1
-
Kingsbury DT, Helinski DR. 1970. DNA polymerase as a requirement for the maintenance of the bacterial plasmid colicinogenic factor E1. Biochem Biophys Res Commun 41:1538-1544
-
(1970)
Biochem Biophys Res Commun
, vol.41
, pp. 1538-1544
-
-
Kingsbury, D.T.1
Helinski, D.R.2
-
261
-
-
34547786556
-
Multicopy plasmid modification with phage lambda Red recombineering
-
Thomason LC, Costantino N, Shaw DV, Court DL. 2007. Multicopy plasmid modification with phage lambda Red recombineering. Plasmid 58:148-158
-
(2007)
Plasmid
, vol.58
, pp. 148-158
-
-
Thomason, L.C.1
Costantino, N.2
Shaw, D.V.3
Court, D.L.4
-
262
-
-
0024003542
-
Modulation of Escherichia coli RecBCD activity by the bacteriophage lambda Gam and P22 Abc functions
-
Poteete AR, Fenton AC, Murphy KC. 1988. Modulation of Escherichia coli RecBCD activity by the bacteriophage lambda Gam and P22 Abc functions. J Bacteriol 170:2012-2021
-
(1988)
J Bacteriol
, vol.170
, pp. 2012-2021
-
-
Poteete, A.R.1
Fenton, A.C.2
Murphy, K.C.3
-
263
-
-
0025008355
-
Lambda Redmediated synthesis of plasmid linear multimers in Escherichia coli K12
-
Silberstein Z, Maor S, Berger I, Cohen A. 1990. Lambda Redmediated synthesis of plasmid linear multimers in Escherichia coli K12. Mol Gen Genet 223:496-507
-
(1990)
Mol Gen Genet
, vol.223
, pp. 496-507
-
-
Silberstein, Z.1
Maor, S.2
Berger, I.3
Cohen, A.4
-
264
-
-
0029894791
-
Mutant fixation via plasmid dimerization and its relation to human diseases
-
Kuzminov A. 1996. Mutant fixation via plasmid dimerization and its relation to human diseases. Trends Genet 12:246-249
-
(1996)
Trends Genet
, vol.12
, pp. 246-249
-
-
Kuzminov, A.1
-
265
-
-
10444281689
-
Restoration of gene function by homologous recombination: from PCR to gene expression in one step
-
Yosef I, Bloushtain N, Shapira M, Qimron U. 2004. Restoration of gene function by homologous recombination: from PCR to gene expression in one step. Appl Environ Microbiol 70:7156-7160
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 7156-7160
-
-
Yosef, I.1
Bloushtain, N.2
Shapira, M.3
Qimron, U.4
-
266
-
-
0035682064
-
Conditional-replication, integration, excision, and retrieval plasmid-host systems for gene structure-function studies of bacteria
-
Haldimann A, Wanner BL. 2001. Conditional-replication, integration, excision, and retrieval plasmid-host systems for gene structure-function studies of bacteria. J Bacteriol 183:6384-6393
-
(2001)
J Bacteriol
, vol.183
, pp. 6384-6393
-
-
Haldimann, A.1
Wanner, B.L.2
-
267
-
-
0025751624
-
An improved Tn7-based system for the single-copy insertion of cloned genes into chromosomes of gram-negative bacteria
-
Bao Y, Lies DP, Fu H, Roberts GP. 1991. An improved Tn7-based system for the single-copy insertion of cloned genes into chromosomes of gram-negative bacteria. Gene 109:167-168
-
(1991)
Gene
, vol.109
, pp. 167-168
-
-
Bao, Y.1
Lies, D.P.2
Fu, H.3
Roberts, G.P.4
-
268
-
-
23044461889
-
An improved method for rapid generation of unmarked Pseudomonas aeruginosa deletion mutants
-
Choi KH, Schweizer HP. 2005. An improved method for rapid generation of unmarked Pseudomonas aeruginosa deletion mutants. BMC Microbiol 5:30. doi:10.1186/1471-2180-5-30
-
(2005)
BMC Microbiol
, vol.5
, pp. 30
-
-
Choi, K.H.1
Schweizer, H.P.2
-
269
-
-
0035004274
-
A panel of Tn7-based vectors for insertion of the gfp marker gene or for delivery of cloned DNA into Gram-negative bacteria at a neutral chromosomal site
-
Koch B, Jensen LE, Nybroe O. 2001. A panel of Tn7-based vectors for insertion of the gfp marker gene or for delivery of cloned DNA into Gram-negative bacteria at a neutral chromosomal site. J Microbiol Methods 45:187-195
-
(2001)
J Microbiol Methods
, vol.45
, pp. 187-195
-
-
Koch, B.1
Jensen, L.E.2
Nybroe, O.3
-
270
-
-
33744988346
-
Fast, easy and efficient: sitespecific insertion of transgenes into enterobacterial chromosomes using Tn7 without need for selection of the insertion event
-
McKenzie GJ, Craig NL. 2006. Fast, easy and efficient: sitespecific insertion of transgenes into enterobacterial chromosomes using Tn7 without need for selection of the insertion event. BMC Microbiol 6:39. doi:10.1186/1471-2180-6-39
-
(2006)
BMC Microbiol
, vol.6
, pp. 39
-
-
McKenzie, G.J.1
Craig, N.L.2
-
271
-
-
3242756694
-
Engineering large fragment insertions into the chromosome of Escherichia coli
-
Rong R, Slupska MM, Chiang JH, Miller JH. 2004. Engineering large fragment insertions into the chromosome of Escherichia coli. Gene 336:73-80
-
(2004)
Gene
, vol.336
, pp. 73-80
-
-
Rong, R.1
Slupska, M.M.2
Chiang, J.H.3
Miller, J.H.4
-
272
-
-
77951278557
-
Site-specific chromosomal integration of large synthetic constructs
-
Kuhlman TE, Cox EC. 2009. Site-specific chromosomal integration of large synthetic constructs. Nucleic Acids Res 38:e92. doi:10.1093/nar/gkp1193
-
(2009)
Nucleic Acids Res
, vol.38
-
-
Kuhlman, T.E.1
Cox, E.C.2
-
273
-
-
77955488715
-
Single-stranded heteroduplex intermediates in lambda Red homologous recombination
-
Maresca M, Erler A, Fu J, Friedrich A, Zhang Y, Stewart AF. 2010. Single-stranded heteroduplex intermediates in lambda Red homologous recombination. BMC Mol Biol 11:54. doi:10.1186/1471-2199-11-54
-
(2010)
BMC Mol Biol
, vol.11
, pp. 54
-
-
Maresca, M.1
Erler, A.2
Fu, J.3
Friedrich, A.4
Zhang, Y.5
Stewart, A.F.6
-
274
-
-
0030794124
-
Pathways for homologous recombination between chromosomal direct repeats in Salmonella typhimurium
-
Galitski T, Roth JR. 1997. Pathways for homologous recombination between chromosomal direct repeats in Salmonella typhimurium. Genetics 146:751-767
-
(1997)
Genetics
, vol.146
, pp. 751-767
-
-
Galitski, T.1
Roth, J.R.2
-
275
-
-
26444466741
-
Chromosomal duplications and cointegrates generated by the bacteriophage lamdba Red system in Escherichia coli K-12
-
Poteete AR, Fenton AC, Nadkarni A. 2004. Chromosomal duplications and cointegrates generated by the bacteriophage lamdba Red system in Escherichia coli K-12. BMC Mol Biol 5:22. doi:10.1186/1471-2199-5-22
-
(2004)
BMC Mol Biol
, vol.5
, pp. 22
-
-
Poteete, A.R.1
Fenton, A.C.2
Nadkarni, A.3
-
276
-
-
0028998597
-
Collapse and repair of replication forks in Escherichia coli
-
Kuzminov A. 1995. Collapse and repair of replication forks in Escherichia coli. Mol Microbiol 16:373-384
-
(1995)
Mol Microbiol
, vol.16
, pp. 373-384
-
-
Kuzminov, A.1
-
277
-
-
0242363153
-
Adaptive mutation: general mutagenesis is not a programmed response to stress but results from rare coamplification of dinB with lac
-
Slechta ES, Bunny KL, Kugelberg E, Kofoid E, Andersson DI, Roth JR. 2003. Adaptive mutation: general mutagenesis is not a programmed response to stress but results from rare coamplification of dinB with lac. Proc Natl Acad Sci USA 100:12847-12852
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 12847-12852
-
-
Slechta, E.S.1
Bunny, K.L.2
Kugelberg, E.3
Kofoid, E.4
Andersson, D.I.5
Roth, J.R.6
-
278
-
-
62849117731
-
Expansion of a chromosomal repeat in Escherichia coli: roles of replication, repair, and recombination functions
-
Poteete AR. 2009. Expansion of a chromosomal repeat in Escherichia coli: roles of replication, repair, and recombination functions. BMC Mol Biol 10:14. doi:10.1186/1471-2199-10-14
-
(2009)
BMC Mol Biol
, vol.10
, pp. 14
-
-
Poteete, A.R.1
-
279
-
-
0033808847
-
A practical guide to the construction and use of lac fusions in Escherichia coli
-
Hand NJ, Silhavy TJ. 2000. A practical guide to the construction and use of lac fusions in Escherichia coli. Methods Enzymol 326:11-35
-
(2000)
Methods Enzymol
, vol.326
, pp. 11-35
-
-
Hand, N.J.1
Silhavy, T.J.2
-
280
-
-
0033968473
-
Genetic system for reversible integration of DNA constructs and lacZ gene fusions into the Escherichia coli chromosome
-
Platt R, Drescher C, Park SK, Phillips GJ. 2000. Genetic system for reversible integration of DNA constructs and lacZ gene fusions into the Escherichia coli chromosome. Plasmid 43:12-23
-
(2000)
Plasmid
, vol.43
, pp. 12-23
-
-
Platt, R.1
Drescher, C.2
Park, S.K.3
Phillips, G.J.4
-
281
-
-
0022381729
-
Uses of lac fusions for the study of biological problems
-
Silhavy TJ, Beckwith JR. 1985. Uses of lac fusions for the study of biological problems. Microbiol Rev 49:398-418
-
(1985)
Microbiol Rev
, vol.49
, pp. 398-418
-
-
Silhavy, T.J.1
Beckwith, J.R.2
-
282
-
-
0023255472
-
Improved single and multicopy lac-based cloning vectors for protein and operon fusions
-
Simons RW, Houman F, Kleckner N. 1987. Improved single and multicopy lac-based cloning vectors for protein and operon fusions. Gene 53:85-96
-
(1987)
Gene
, vol.53
, pp. 85-96
-
-
Simons, R.W.1
Houman, F.2
Kleckner, N.3
-
283
-
-
0025836769
-
Genetic fusions as experimental tools
-
Slauch JM, Silhavy TJ. 1991. Genetic fusions as experimental tools. Methods Enzymol 204:213-248
-
(1991)
Methods Enzymol
, vol.204
, pp. 213-248
-
-
Slauch, J.M.1
Silhavy, T.J.2
-
285
-
-
0037094370
-
Construction of targeted single copy lac fusions using lambda Red and FLPmediated site-specific recombination in bacteria
-
Ellermeier CD, Janakiraman A, Slauch JM. 2002. Construction of targeted single copy lac fusions using lambda Red and FLPmediated site-specific recombination in bacteria. Gene 290:153-161
-
(2002)
Gene
, vol.290
, pp. 153-161
-
-
Ellermeier, C.D.1
Janakiraman, A.2
Slauch, J.M.3
-
286
-
-
34447517753
-
Rapid engineering of bacterial reporter gene fusions by using Red recombination
-
Gerlach RG, Holzer SU, Jackel D, Hensel M. 2007. Rapid engineering of bacterial reporter gene fusions by using Red recombination. Appl Environ Microbiol 73:4234-4242
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 4234-4242
-
-
Gerlach, R.G.1
Holzer, S.U.2
Jackel, D.3
Hensel, M.4
-
287
-
-
33744820844
-
Caenorhabditis elegans reporter fusion genes generated by seamless modification of large genomic DNA clones
-
Dolphin CT, Hope IA. 2006. Caenorhabditis elegans reporter fusion genes generated by seamless modification of large genomic DNA clones. Nucleic Acids Res 34:e72. doi:10.1093/nar/gkl352
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Dolphin, C.T.1
Hope, I.A.2
-
288
-
-
77952596922
-
Escherichia coli MW005: lambda Red-mediated recombineering and copy-number induction of oriV-equipped constructs in a single host
-
Westenberg M, Bamps S, Soedling H, Hope IA, Dolphin CT. 2010. Escherichia coli MW005: lambda Red-mediated recombineering and copy-number induction of oriV-equipped constructs in a single host. BMC Biotechnol 10:27. doi:10.1186/1472-6750-10-27
-
(2010)
BMC Biotechnol
, vol.10
, pp. 27
-
-
Westenberg, M.1
Bamps, S.2
Soedling, H.3
Hope, I.A.4
Dolphin, C.T.5
-
289
-
-
84871713284
-
A simplified counter-selection recombineering protocol for creating fluorescent protein reporter constructs directly from C. elegans fosmid genomic clones
-
Hirani N, Westenberg M, Gami MS, Davis P, Hope IA, Dolphin CT. 2013. A simplified counter-selection recombineering protocol for creating fluorescent protein reporter constructs directly from C. elegans fosmid genomic clones. BMC Biotechnol 13:1. doi:10.1186/1472-6750-13-1
-
(2013)
BMC Biotechnol
, vol.13
, pp. 1
-
-
Hirani, N.1
Westenberg, M.2
Gami, M.S.3
Davis, P.4
Hope, I.A.5
Dolphin, C.T.6
-
290
-
-
49149113206
-
Comparative genomics of the mycobacteriophages: insights into bacteriophage evolution
-
Hatfull GF, Cresawn SG, Hendrix RW. 2008. Comparative genomics of the mycobacteriophages: insights into bacteriophage evolution. Res Microbiol 159:332-339
-
(2008)
Res Microbiol
, vol.159
, pp. 332-339
-
-
Hatfull, G.F.1
Cresawn, S.G.2
Hendrix, R.W.3
-
291
-
-
44449095969
-
Nobel Prizes and the emerging virus concept
-
Norrby E. 2008. Nobel Prizes and the emerging virus concept. Arch Virol 153:1109-1123
-
(2008)
Arch Virol
, vol.153
, pp. 1109-1123
-
-
Norrby, E.1
-
292
-
-
33745713073
-
Phage for rapid detection and control of bacterial pathogens in food
-
Rees CE, Dodd CE. 2006. Phage for rapid detection and control of bacterial pathogens in food. Adv Appl Microbiol 59:159-186
-
(2006)
Adv Appl Microbiol
, vol.59
, pp. 159-186
-
-
Rees, C.E.1
Dodd, C.E.2
-
293
-
-
1342321891
-
In vivo recombineering of bacteriophage lambda by PCR fragments and single-strand oligonucleotides
-
Oppenheim AB, Rattray AJ, Bubunenko M, Thomason LC, Court DL. 2004. In vivo recombineering of bacteriophage lambda by PCR fragments and single-strand oligonucleotides. Virology 319:185-189
-
(2004)
Virology
, vol.319
, pp. 185-189
-
-
Oppenheim, A.B.1
Rattray, A.J.2
Bubunenko, M.3
Thomason, L.C.4
Court, D.L.5
-
294
-
-
58149105452
-
BRED: a simple and powerful tool for constructing mutant and recombinant bacteriophage genomes
-
Marinelli LJ, Piuri M, Swigonova Z, Balachandran A, Oldfield LM, van Kessel JC, Hatfull GF. 2008. BRED: a simple and powerful tool for constructing mutant and recombinant bacteriophage genomes. PLoS One 3:e3957. doi:10.1371/journal.pone.0003957
-
(2008)
PLoS One
, vol.3
-
-
Marinelli, L.J.1
Piuri, M.2
Swigonova, Z.3
Balachandran, A.4
Oldfield, L.M.5
van Kessel, J.C.6
Hatfull, G.F.7
-
295
-
-
33644907784
-
Gene-specific random mutagenesis of Escherichia coli in vivo: isolation of temperature-sensitive mutations in the acyl carrier protein of fatty acid synthesis
-
De Lay NR, Cronan JE. 2006. Gene-specific random mutagenesis of Escherichia coli in vivo: isolation of temperature-sensitive mutations in the acyl carrier protein of fatty acid synthesis. J Bacteriol 188:287-296
-
(2006)
J Bacteriol
, vol.188
, pp. 287-296
-
-
De Lay, N.R.1
Cronan, J.E.2
-
296
-
-
85045502002
-
Randomization of genes by PCR mutagenesis
-
Cadwell RC, Joyce GF. 1992. Randomization of genes by PCR mutagenesis. PCR Methods Appl 2:28-33
-
(1992)
PCR Methods Appl
, vol.2
, pp. 28-33
-
-
Cadwell, R.C.1
Joyce, G.F.2
-
297
-
-
0024556150
-
Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension
-
Horton RM, Hunt HD, Ho SN, Pullen JK, Pease LR. 1989. Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension. Gene 77:61-68
-
(1989)
Gene
, vol.77
, pp. 61-68
-
-
Horton, R.M.1
Hunt, H.D.2
Ho, S.N.3
Pullen, J.K.4
Pease, L.R.5
-
298
-
-
33646722147
-
Emergent properties of reduced-genome Escherichia coli
-
Posfai G, Plunkett G, 3rd, Feher T, Frisch D, Keil GM, Umenhoffer K, Kolisnychenko V, Stahl B, Sharma SS, de Arruda M, Burland V, Harcum SW, Blattner FR. 2006. Emergent properties of reduced-genome Escherichia coli. Science 312:1044-1046
-
(2006)
Science
, vol.312
, pp. 1044-1046
-
-
Posfai, G.1
Plunkett, G.2
Feher, T.3
Frisch, D.4
Keil, G.M.5
Umenhoffer, K.6
Kolisnychenko, V.7
Stahl, B.8
Sharma, S.S.9
de Arruda, M.10
Burland, V.11
Harcum, S.W.12
Blattner, F.R.13
-
299
-
-
84857114878
-
Lowmutation-rate, reduced-genome Escherichia coli: an improved host for faithful maintenance of engineered genetic constructs
-
Csorgo B, Feher T, Timar E, Blattner FR, Posfai G. 2012. Lowmutation-rate, reduced-genome Escherichia coli: an improved host for faithful maintenance of engineered genetic constructs. Microb Cell Fact 11:11. doi:10.1186/1475-2859-11-11
-
(2012)
Microb Cell Fact
, vol.11
, pp. 11
-
-
Csorgo, B.1
Feher, T.2
Timar, E.3
Blattner, F.R.4
Posfai, G.5
-
300
-
-
56049102602
-
Superpositioning of deletions promotes growth of Escherichia coli with a reduced genome
-
Mizoguchi H, Sawano Y, Kato J, Mori H. 2008. Superpositioning of deletions promotes growth of Escherichia coli with a reduced genome. DNA Res 15:277-284
-
(2008)
DNA Res
, vol.15
, pp. 277-284
-
-
Mizoguchi, H.1
Sawano, Y.2
Kato, J.3
Mori, H.4
-
301
-
-
0032485843
-
Artificial promoters for metabolic optimization
-
Jensen PR, Hammer K. 1998. Artificial promoters for metabolic optimization. Biotechnol Bioeng 58:191-195
-
(1998)
Biotechnol Bioeng
, vol.58
, pp. 191-195
-
-
Jensen, P.R.1
Hammer, K.2
-
302
-
-
0031965086
-
The sequence of spacers between the consensus sequences modulates the strength of prokaryotic promoters
-
Jensen PR, Hammer K. 1998. The sequence of spacers between the consensus sequences modulates the strength of prokaryotic promoters. Appl Environ Microbiol 64:82-87
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 82-87
-
-
Jensen, P.R.1
Hammer, K.2
-
304
-
-
0036250071
-
Modulation of gene expression made easy
-
Solem C, Jensen PR. 2002. Modulation of gene expression made easy. Appl Environ Microbiol 68:2397-2403
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 2397-2403
-
-
Solem, C.1
Jensen, P.R.2
-
305
-
-
17444400486
-
New tool for metabolic pathway engineering in Escherichia coli: one-step method to modulate expression of chromosomal genes
-
Meynial-Salles I, Cervin MA, Soucaille P. 2005. New tool for metabolic pathway engineering in Escherichia coli: one-step method to modulate expression of chromosomal genes. Appl Environ Microbiol 71:2140-2144
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 2140-2144
-
-
Meynial-Salles, I.1
Cervin, M.A.2
Soucaille, P.3
-
306
-
-
84874608929
-
RNA-guided editing of bacterial genomes using CRISPR-Cas systems
-
Jiang W, Bikard D, Cox D, Zhang F, Marraffini LA. 2013. RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nat Biotechnol 31:233-239
-
(2013)
Nat Biotechnol
, vol.31
, pp. 233-239
-
-
Jiang, W.1
Bikard, D.2
Cox, D.3
Zhang, F.4
Marraffini, L.A.5
-
307
-
-
0023644769
-
Double-chain-cut sites are recombination hotspots in the Red pathway of phage lambda
-
Thaler DS, Stahl MM, Stahl FW. 1987. Double-chain-cut sites are recombination hotspots in the Red pathway of phage lambda. J Mol Biol 195:75-87
-
(1987)
J Mol Biol
, vol.195
, pp. 75-87
-
-
Thaler, D.S.1
Stahl, M.M.2
Stahl, F.W.3
-
308
-
-
84936967101
-
Coupling the CRISPR/Cas9 system with lambda red recombineering enables simplified chromosomal gene replacement in Escherichia coli
-
Pyne ME, Moo-Young M, Chung DA, Chou CP. 2015. Coupling the CRISPR/Cas9 system with lambda red recombineering enables simplified chromosomal gene replacement in Escherichia coli. Appl Environ Microbiol 81:5103-5114
-
(2015)
Appl Environ Microbiol
, vol.81
, pp. 5103-5114
-
-
Pyne, M.E.1
Moo-Young, M.2
Chung, D.A.3
Chou, C.P.4
-
309
-
-
84925355124
-
Multigene editing in the Escherichia coli genome via the CRISPR-Cas9 system
-
Jiang Y, Chen B, Duan C, Sun B, Yang J, Yang S. 2015. Multigene editing in the Escherichia coli genome via the CRISPR-Cas9 system. Appl Environ Microbiol 81:2506-2514
-
(2015)
Appl Environ Microbiol
, vol.81
, pp. 2506-2514
-
-
Jiang, Y.1
Chen, B.2
Duan, C.3
Sun, B.4
Yang, J.5
Yang, S.6
-
310
-
-
73849087355
-
Update on the Keio collection of Escherichia coli single-gene deletion mutants
-
Yamamoto N, Nakahigashi K, Nakamichi T, Yoshino M, Takai Y, Touda Y, Furubayashi A, Kinjyo S, Dose H, Hasegawa M, Datsenko KA, Nakayashiki T, Tomita M, Wanner BL, Mori H. 2009. Update on the Keio collection of Escherichia coli single-gene deletion mutants. Mol Syst Biol 5:335. doi:10.1038/msb.2009.92
-
(2009)
Mol Syst Biol
, vol.5
, pp. 335
-
-
Yamamoto, N.1
Nakahigashi, K.2
Nakamichi, T.3
Yoshino, M.4
Takai, Y.5
Touda, Y.6
Furubayashi, A.7
Kinjyo, S.8
Dose, H.9
Hasegawa, M.10
Datsenko, K.A.11
Nakayashiki, T.12
Tomita, M.13
Wanner, B.L.14
Mori, H.15
-
311
-
-
0029804246
-
Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy
-
Shoemaker DD, Lashkari DA, Morris D, Mittmann M, Davis RW. 1996. Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy. Nat Genet 14:450-456
-
(1996)
Nat Genet
, vol.14
, pp. 450-456
-
-
Shoemaker, D.D.1
Lashkari, D.A.2
Morris, D.3
Mittmann, M.4
Davis, R.W.5
-
312
-
-
0033529707
-
Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis
-
Winzeler EA, Shoemaker DD, Astromoff A, Liang H, Anderson K, Andre B, Bangham R, Benito R, Boeke JD, Bussey H, Chu AM, Connelly C, Davis K, Dietrich F, Dow SW, El Bakkoury M, Foury F, Friend SH, Gentalen E, Giaever G, Hegemann JH, Jones T, Laub M, Liao H, Liebundguth N, Lockhart DJ, Lucau-Danila A, Lussier M, M'Rabet N, Menard P, Mittmann M, Pai C, Rebischung C, Revuelta JL, Riles L, Roberts CJ, Ross-MacDonald P, Scherens B, Snyder M, Sookhai-Mahadeo S, Storms RK, Veronneau S, Voet M, Volckaert G, Ward TR, Wysocki R, Yen GS, Yu K, Zimmermann K, Philippsen P, et al. 1999. Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science 285:901-906
-
(1999)
Science
, vol.285
, pp. 901-906
-
-
Winzeler, E.A.1
Shoemaker, D.D.2
Astromoff, A.3
Liang, H.4
Anderson, K.5
Andre, B.6
Bangham, R.7
Benito, R.8
Boeke, J.D.9
Bussey, H.10
Chu, A.M.11
Connelly, C.12
Davis, K.13
Dietrich, F.14
Dow, S.W.15
El Bakkoury, M.16
Foury, F.17
Friend, S.H.18
Gentalen, E.19
Giaever, G.20
Hegemann, J.H.21
Jones, T.22
Laub, M.23
Liao, H.24
Liebundguth, N.25
Lockhart, D.J.26
Lucau-Danila, A.27
Lussier, M.28
M'Rabet, N.29
Menard, P.30
Mittmann, M.31
Pai, C.32
Rebischung, C.33
Revuelta, J.L.34
Riles, L.35
Roberts, C.J.36
Ross-MacDonald, P.37
Scherens, B.38
Snyder, M.39
Sookhai-Mahadeo, S.40
Storms, R.K.41
Veronneau, S.42
Voet, M.43
Volckaert, G.44
Ward, T.R.45
Wysocki, R.46
Yen, G.S.47
Yu, K.48
Zimmermann, K.49
Philippsen, P.50
more..
-
313
-
-
50849125711
-
High-throughput, quantitative analyses of genetic interactions in E. coli
-
Typas A, Nichols RJ, Siegele DA, Shales M, Collins SR, Lim B, Braberg H, Yamamoto N, Takeuchi R, Wanner BL, Mori H, Weissman JS, Krogan NJ, Gross CA. 2008. High-throughput, quantitative analyses of genetic interactions in E. coli. NatMethods 5:781-787
-
(2008)
NatMethods
, vol.5
, pp. 781-787
-
-
Typas, A.1
Nichols, R.J.2
Siegele, D.A.3
Shales, M.4
Collins, S.R.5
Lim, B.6
Braberg, H.7
Yamamoto, N.8
Takeuchi, R.9
Wanner, B.L.10
Mori, H.11
Weissman, J.S.12
Krogan, N.J.13
Gross, C.A.14
-
314
-
-
13444283630
-
Interaction network containing conserved and essential protein complexes in Escherichia coli
-
Butland G, Peregrin-Alvarez JM, Li J, Yang W, Yang X, Canadien V, Starostine A, Richards D, Beattie B, Krogan N, Davey M, Parkinson J, Greenblatt J, Emili A. 2005. Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433:531-537
-
(2005)
Nature
, vol.433
, pp. 531-537
-
-
Butland, G.1
Peregrin-Alvarez, J.M.2
Li, J.3
Yang, W.4
Yang, X.5
Canadien, V.6
Starostine, A.7
Richards, D.8
Beattie, B.9
Krogan, N.10
Davey, M.11
Parkinson, J.12
Greenblatt, J.13
Emili, A.14
-
315
-
-
66049143558
-
Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins
-
Hu P, Janga SC, Babu M, Diaz-Mejia JJ, Butland G, Yang W, Pogoutse O, Guo X, Phanse S, Wong P, Chandran S, Christopoulos C, Nazarians-Armavil A, Nasseri NK, Musso G, Ali M, Nazemof N, Eroukova V, Golshani A, Paccanaro A, Greenblatt JF, Moreno-Hagelsieb G, Emili A. 2009. Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol 7:e96. doi:10.1371/journal.pbio.1000096
-
(2009)
PLoS Biol
, vol.7
-
-
Hu, P.1
Janga, S.C.2
Babu, M.3
Diaz-Mejia, J.J.4
Butland, G.5
Yang, W.6
Pogoutse, O.7
Guo, X.8
Phanse, S.9
Wong, P.10
Chandran, S.11
Christopoulos, C.12
Nazarians-Armavil, A.13
Nasseri, N.K.14
Musso, G.15
Ali, M.16
Nazemof, N.17
Eroukova, V.18
Golshani, A.19
Paccanaro, A.20
Greenblatt, J.F.21
Moreno-Hagelsieb, G.22
Emili, A.23
more..
-
316
-
-
34247897332
-
Visualizing the proteome of Escherichia coli: an efficient and versatile method for labeling chromosomal coding DNA sequences (CDSs) with fluorescent protein genes
-
Watt RM, Wang J, Leong M, Kung HF, Cheah KS, Liu D, Danchin A, Huang JD. 2007. Visualizing the proteome of Escherichia coli: an efficient and versatile method for labeling chromosomal coding DNA sequences (CDSs) with fluorescent protein genes. Nucleic Acids Res 35:e37. doi:10.1093/nar/gkl1158
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Watt, R.M.1
Wang, J.2
Leong, M.3
Kung, H.F.4
Cheah, K.S.5
Liu, D.6
Danchin, A.7
Huang, J.D.8
-
317
-
-
3242800469
-
Systematic mutagenesis of the Escherichia coli genome
-
Kang Y, Durfee T, Glasner JD, Qiu Y, Frisch D, Winterberg KM, Blattner FR. 2004. Systematic mutagenesis of the Escherichia coli genome. J Bacteriol 186:4921-4930
-
(2004)
J Bacteriol
, vol.186
, pp. 4921-4930
-
-
Kang, Y.1
Durfee, T.2
Glasner, J.D.3
Qiu, Y.4
Frisch, D.5
Winterberg, K.M.6
Blattner, F.R.7
-
318
-
-
33748999996
-
A recombineering pipeline for functional genomics applied to Caenorhabditis elegans
-
Sarov M, Schneider S, Pozniakovski A, Roguev A, Ernst S, Zhang Y, Hyman AA, Stewart AF. 2006. A recombineering pipeline for functional genomics applied to Caenorhabditis elegans. NatMethods 3:839-844
-
(2006)
NatMethods
, vol.3
, pp. 839-844
-
-
Sarov, M.1
Schneider, S.2
Pozniakovski, A.3
Roguev, A.4
Ernst, S.5
Zhang, Y.6
Hyman, A.A.7
Stewart, A.F.8
-
319
-
-
0024041732
-
Site-specific DNA recombination in mammalian cells by the Cre recombinase of bacteriophage P1
-
Sauer B, Henderson N. 1988. Site-specific DNA recombination in mammalian cells by the Cre recombinase of bacteriophage P1. Proc Natl Acad Sci USA 85:5166-5170
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 5166-5170
-
-
Sauer, B.1
Henderson, N.2
-
320
-
-
0024509412
-
Cre-stimulated recombination at loxP-containing DNA sequences placed into the mammalian genome
-
Sauer B, Henderson N. 1989. Cre-stimulated recombination at loxP-containing DNA sequences placed into the mammalian genome. Nucleic Acids Res 17:147-161
-
(1989)
Nucleic Acids Res
, vol.17
, pp. 147-161
-
-
Sauer, B.1
Henderson, N.2
-
321
-
-
0034842640
-
Site-and time-specific gene targeting in the mouse
-
Metzger D, Chambon P. 2001. Site-and time-specific gene targeting in the mouse. Methods 24:71-80
-
(2001)
Methods
, vol.24
, pp. 71-80
-
-
Metzger, D.1
Chambon, P.2
-
322
-
-
0033559118
-
Rapid modification of bacterial artificial chromosomes by ET-recombination
-
Muyrers JP, Zhang Y, Testa G, Stewart AF. 1999. Rapid modification of bacterial artificial chromosomes by ET-recombination. Nucleic Acids Res 27:1555-1557
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1555-1557
-
-
Muyrers, J.P.1
Zhang, Y.2
Testa, G.3
Stewart, A.F.4
-
323
-
-
0035308590
-
A highly efficient Escherichia coli-based chromosome engineering system adapted for recombinogenic targeting and subcloning of BAC DNA
-
Lee EC, Yu D, Martinez de Velasco J, Tessarollo L, Swing DA, Court DL, Jenkins NA, Copeland NG. 2001. A highly efficient Escherichia coli-based chromosome engineering system adapted for recombinogenic targeting and subcloning of BAC DNA. Genomics 73:56-65
-
(2001)
Genomics
, vol.73
, pp. 56-65
-
-
Lee, E.C.1
Yu, D.2
Martinez de Velasco, J.3
Tessarollo, L.4
Swing, D.A.5
Court, D.L.6
Jenkins, N.A.7
Copeland, N.G.8
-
324
-
-
65549165490
-
Construction of gene-targeting vectors by recombineering
-
Lee SC, Wang W, Liu P. 2009. Construction of gene-targeting vectors by recombineering. Methods Mol Biol 530:15-27
-
(2009)
Methods Mol Biol
, vol.530
, pp. 15-27
-
-
Lee, S.C.1
Wang, W.2
Liu, P.3
-
325
-
-
59649119606
-
Recombineering-based procedure for creating Cre/loxP conditional knockouts in the mouse
-
Unit 23.13
-
Bouvier J, Cheng JG. 2009. Recombineering-based procedure for creating Cre/loxP conditional knockouts in the mouse. Curr Protoc Mol Biol Chapter 23:Unit 23.13. doi:10.1002/0471142727.mb2313s85
-
(2009)
Curr Protoc Mol Biol Chapter
, vol.23
-
-
Bouvier, J.1
Cheng, J.G.2
-
326
-
-
65549115554
-
Generation of Cre recombinase-expressing transgenic mice using bacterial artificial chromosomes
-
Parkitna JR, Engblom D, Schutz G. 2009. Generation of Cre recombinase-expressing transgenic mice using bacterial artificial chromosomes. Methods Mol Biol 530:325-342
-
(2009)
Methods Mol Biol
, vol.530
, pp. 325-342
-
-
Parkitna, J.R.1
Engblom, D.2
Schutz, G.3
-
327
-
-
0037029629
-
Salmonella pathogenicity island 2 mediates protection of intracellular Salmonella from reactive nitrogen intermediates
-
Chakravortty D, Hansen-Wester I, Hensel M. 2002. Salmonella pathogenicity island 2 mediates protection of intracellular Salmonella from reactive nitrogen intermediates. J Exp Med 195:1155-1166
-
(2002)
J Exp Med
, vol.195
, pp. 1155-1166
-
-
Chakravortty, D.1
Hansen-Wester, I.2
Hensel, M.3
-
328
-
-
0036155126
-
FimZ Is a molecular link between sticking and swimming in Salmonella enterica serovar Typhimurium 1213
-
Clegg S, Hughes KT. 2002. FimZ Is a molecular link between sticking and swimming in Salmonella enterica serovar Typhimurium 1213. J Bacteriol 184:1209-1213
-
(2002)
J Bacteriol
, vol.184
, pp. 1209-1213
-
-
Clegg, S.1
Hughes, K.T.2
-
329
-
-
0036723782
-
SpiC Is required for translocation of Salmonella pathogenicity island 2 effectors and secretion of translocon proteins SseB and SseC
-
Freeman JA, Rappl CV, Kuhle V, Hensel M, Miller SI. 2002. SpiC Is required for translocation of Salmonella pathogenicity island 2 effectors and secretion of translocon proteins SseB and SseC. J Bacteriol 184:4971-4980
-
(2002)
J Bacteriol
, vol.184
, pp. 4971-4980
-
-
Freeman, J.A.1
Rappl, C.V.2
Kuhle, V.3
Hensel, M.4
Miller, S.I.5
-
330
-
-
0036178889
-
PduA is a shell protein of polyhedral organelles involved in coenzyme B12-dependent degradation of 1,2-propanediol in Salmonella enterica serovar Typhimurium LT2
-
Havemann GD, Sampson EM, Bobik TA. 2002. PduA is a shell protein of polyhedral organelles involved in coenzyme B12-dependent degradation of 1,2-propanediol in Salmonella enterica serovar Typhimurium LT2. J Bacteriol 184:1253-1261
-
(2002)
J Bacteriol
, vol.184
, pp. 1253-1261
-
-
Havemann, G.D.1
Sampson, E.M.2
Bobik, T.A.3
-
331
-
-
0035094993
-
The alternative electron acceptor tetrathionate supports B12-dependent anaerobic growth of Salmonella enterica serovar Typhimurium on ethanolamine or 1,2-propanediol
-
Price-Carter M, Tingey J, Bobik TA, Roth JR. 2001. The alternative electron acceptor tetrathionate supports B12-dependent anaerobic growth of Salmonella enterica serovar Typhimurium on ethanolamine or 1,2-propanediol. J Bacteriol 183:2463-2475
-
(2001)
J Bacteriol
, vol.183
, pp. 2463-2475
-
-
Price-Carter, M.1
Tingey, J.2
Bobik, T.A.3
Roth, J.R.4
-
332
-
-
0033901978
-
Tissue-specific gene expression identifies a gene in the lysogenic phage Gifsy-1 that affects Salmonella enterica serovar Typhimurium survival in Peyer's patches
-
Stanley TL, Ellermeier CD, Slauch JM. 2000. Tissue-specific gene expression identifies a gene in the lysogenic phage Gifsy-1 that affects Salmonella enterica serovar Typhimurium survival in Peyer's patches. J Bacteriol 186:4406-4413
-
(2000)
J Bacteriol
, vol.186
, pp. 4406-4413
-
-
Stanley, T.L.1
Ellermeier, C.D.2
Slauch, J.M.3
-
333
-
-
0035984435
-
ZntB is a novel Zn2+ transporter in Salmonella enterica serovar Typhimurium
-
Worlock AJ, Smith RL. 2002. ZntB is a novel Zn2+ transporter in Salmonella enterica serovar Typhimurium. J Bacteriol 184:4369-4373
-
(2002)
J Bacteriol
, vol.184
, pp. 4369-4373
-
-
Worlock, A.J.1
Smith, R.L.2
-
334
-
-
0036151138
-
The global regulator ArcA controls resistance to reactive nitrogen and oxygen intermediates in Salmonella enterica serovar Enteritidis
-
Lu S, Killoran PB, Fang FC, Riley LW. 2002. The global regulator ArcA controls resistance to reactive nitrogen and oxygen intermediates in Salmonella enterica serovar Enteritidis. Infect Immun 70:451-461
-
(2002)
Infect Immun
, vol.70
, pp. 451-461
-
-
Lu, S.1
Killoran, P.B.2
Fang, F.C.3
Riley, L.W.4
-
335
-
-
33749237700
-
OspF and OspC1 are Shigella flexneri type III secretion system effectors that are required for postinvasion aspects of virulence
-
Zurawski DV, Mitsuhata C, Mumy KL, McCormick BA, Maurelli AT. 2006. OspF and OspC1 are Shigella flexneri type III secretion system effectors that are required for postinvasion aspects of virulence. Infect Immun 74:5964-5976
-
(2006)
Infect Immun
, vol.74
, pp. 5964-5976
-
-
Zurawski, D.V.1
Mitsuhata, C.2
Mumy, K.L.3
McCormick, B.A.4
Maurelli, A.T.5
-
336
-
-
40749134607
-
Role and regulation of ironsulfur cluster biosynthesis genes in Shigella flexneri virulence
-
Runyen-Janecky L, Daugherty A, Lloyd B, Wellington C, Eskandarian H, Sagransky M. 2008. Role and regulation of ironsulfur cluster biosynthesis genes in Shigella flexneri virulence. Infect Immun 76:1083-1092
-
(2008)
Infect Immun
, vol.76
, pp. 1083-1092
-
-
Runyen-Janecky, L.1
Daugherty, A.2
Lloyd, B.3
Wellington, C.4
Eskandarian, H.5
Sagransky, M.6
-
337
-
-
33745812873
-
Developing live Shigella vaccines using lambda Red recombineering
-
Ranallo RT, Barnoy S, Thakkar S, Urick T, Venkatesan MM. 2006. Developing live Shigella vaccines using lambda Red recombineering. FEMS Immunol Med Microbiol 47:462-469
-
(2006)
FEMS Immunol Med Microbiol
, vol.47
, pp. 462-469
-
-
Ranallo, R.T.1
Barnoy, S.2
Thakkar, S.3
Urick, T.4
Venkatesan, M.M.5
-
338
-
-
33846885007
-
Immunogenicity and characterization of WRSF2G11: a second generation live attenuated Shigella flexneri 2a vaccine strain
-
Ranallo RT, Thakkar S, Chen Q, Venkatesan MM. 2007. Immunogenicity and characterization of WRSF2G11: a second generation live attenuated Shigella flexneri 2a vaccine strain. Vaccine 25:2269-2278
-
(2007)
Vaccine
, vol.25
, pp. 2269-2278
-
-
Ranallo, R.T.1
Thakkar, S.2
Chen, Q.3
Venkatesan, M.M.4
-
339
-
-
0035093654
-
Growth inhibition caused by overexpression of the structural gene for glutamate dehydrogenase (gdhA) from Klebsiella aerogenes
-
Janes BK, Pomposiello PJ, Perez-Matos A, Najarian DJ, Goss TJ, Bender RA. 2001. Growth inhibition caused by overexpression of the structural gene for glutamate dehydrogenase (gdhA) from Klebsiella aerogenes. J Bacteriol 183:2709-2714
-
(2001)
J Bacteriol
, vol.183
, pp. 2709-2714
-
-
Janes, B.K.1
Pomposiello, P.J.2
Perez-Matos, A.3
Najarian, D.J.4
Goss, T.J.5
Bender, R.A.6
-
340
-
-
11844292053
-
The Cpx envelope stress response affects expression of the type IV bundle-forming pili of enteropathogenic Escherichia coli
-
Nevesinjac AZ, Raivio TL. 2005. The Cpx envelope stress response affects expression of the type IV bundle-forming pili of enteropathogenic Escherichia coli. J Bacteriol 187:672-686
-
(2005)
J Bacteriol
, vol.187
, pp. 672-686
-
-
Nevesinjac, A.Z.1
Raivio, T.L.2
-
341
-
-
34547647325
-
Integrinmediated host cell invasion by type 1-piliated uropathogenic Escherichia coli
-
Eto DS, Jones TA, Sundsbak JL, Mulvey MA. 2007. Integrinmediated host cell invasion by type 1-piliated uropathogenic Escherichia coli. PLoS Pathog 3:e100. doi:10.1371/journal.ppat.0030100
-
(2007)
PLoS Pathog
, vol.3
-
-
Eto, D.S.1
Jones, T.A.2
Sundsbak, J.L.3
Mulvey, M.A.4
-
342
-
-
39149088344
-
Regulatory Interactions among adhesin gene systems of uropathogenic Escherichia coli
-
Lindberg S, Xia Y, Sonden B, Goransson M, Hacker J, Uhlin BE. 2008. Regulatory Interactions among adhesin gene systems of uropathogenic Escherichia coli. Infect Immun 76:771-780
-
(2008)
Infect Immun
, vol.76
, pp. 771-780
-
-
Lindberg, S.1
Xia, Y.2
Sonden, B.3
Goransson, M.4
Hacker, J.5
Uhlin, B.E.6
-
343
-
-
44949119547
-
Inactivation of host Akt/protein kinase B signaling by bacterial pore-forming toxins
-
Wiles TJ, Dhakal BK, Eto DS, Mulvey MA. 2008. Inactivation of host Akt/protein kinase B signaling by bacterial pore-forming toxins. Mol Biol Cell 19:1427-1438
-
(2008)
Mol Biol Cell
, vol.19
, pp. 1427-1438
-
-
Wiles, T.J.1
Dhakal, B.K.2
Eto, D.S.3
Mulvey, M.A.4
-
344
-
-
73449097174
-
Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains
-
Lee DJ, Bingle LE, Heurlier K, Pallen MJ, Penn CW, Busby SJ, Hobman JL. 2009. Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains. BMC Microbiol 9:252. doi:10.1186/1471-2180-9-252
-
(2009)
BMC Microbiol
, vol.9
, pp. 252
-
-
Lee, D.J.1
Bingle, L.E.2
Heurlier, K.3
Pallen, M.J.4
Penn, C.W.5
Busby, S.J.6
Hobman, J.L.7
-
345
-
-
41549105328
-
Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa
-
Lesic B, Rahme LG. 2008. Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa. BMC Mol Biol 9:20. doi:10.1186/1471-2199-9-20
-
(2008)
BMC Mol Biol
, vol.9
, pp. 20
-
-
Lesic, B.1
Rahme, L.G.2
-
346
-
-
77955117488
-
Scarless and sequential gene modification in Pseudomonas using PCR product flanked by short homology regions
-
Liang R, Liu J. 2010. Scarless and sequential gene modification in Pseudomonas using PCR product flanked by short homology regions. BMC Microbiol 10:209. doi:10.1186/1471-2180-10-209
-
(2010)
BMC Microbiol
, vol.10
, pp. 209
-
-
Liang, R.1
Liu, J.2
-
347
-
-
0142059349
-
A rapid and simple method for inactivating chromosomal genes in Yersinia
-
Derbise A, Lesic B, Dacheux D, Ghigo JM, Carniel E. 2003. A rapid and simple method for inactivating chromosomal genes in Yersinia. FEMS Immunol Med Microbiol 38:113-116
-
(2003)
FEMS Immunol Med Microbiol
, vol.38
, pp. 113-116
-
-
Derbise, A.1
Lesic, B.2
Dacheux, D.3
Ghigo, J.M.4
Carniel, E.5
-
348
-
-
46949111513
-
Highly efficient method for introducing successive multiple scarless gene deletions and markerless gene insertions into the Yersinia pestis chromosome
-
Sun W, Wang S, Curtiss R, 3rd. 2008. Highly efficient method for introducing successive multiple scarless gene deletions and markerless gene insertions into the Yersinia pestis chromosome. Appl Environ Microbiol 74:4241-4245
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 4241-4245
-
-
Sun, W.1
Wang, S.2
Curtiss, R.3
-
349
-
-
0038236453
-
Haemophore-mediated signal transduction across the bacterial cell envelope in Serratia marcescens: the inducer and the transported substrate are different molecules
-
Rossi MS, Paquelin A, Ghigo JM, Wandersman C. 2003. Haemophore-mediated signal transduction across the bacterial cell envelope in Serratia marcescens: the inducer and the transported substrate are different molecules. Mol Microbiol 48:1467-1480
-
(2003)
Mol Microbiol
, vol.48
, pp. 1467-1480
-
-
Rossi, M.S.1
Paquelin, A.2
Ghigo, J.M.3
Wandersman, C.4
-
350
-
-
64749088255
-
Application of lambda Red recombination system to Vibrio cholerae genetics: simple methods for inactivation and modification of chromosomal genes
-
Yamamoto S, Izumiya H, Morita M, Arakawa E, Watanabe H. 2009. Application of lambda Red recombination system to Vibrio cholerae genetics: simple methods for inactivation and modification of chromosomal genes. Gene 438:57-64
-
(2009)
Gene
, vol.438
, pp. 57-64
-
-
Yamamoto, S.1
Izumiya, H.2
Morita, M.3
Arakawa, E.4
Watanabe, H.5
-
352
-
-
79952760675
-
Depletion of antibiotic targets has widely varying effects on growth
-
Wei JR, Krishnamoorthy V, Murphy K, Kim JH, Schnappinger D, Alber T, Sassetti CM, Rhee KY, Rubin EJ. 2011. Depletion of antibiotic targets has widely varying effects on growth. Proc Natl Acad Sci USA 108:4176-4181
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 4176-4181
-
-
Wei, J.R.1
Krishnamoorthy, V.2
Murphy, K.3
Kim, J.H.4
Schnappinger, D.5
Alber, T.6
Sassetti, C.M.7
Rhee, K.Y.8
Rubin, E.J.9
-
353
-
-
84884505005
-
Identification of new drug targets and resistance mechanisms in Mycobacterium tuberculosis
-
Ioerger TR, O'Malley T, Liao R, Guinn KM, Hickey MJ, Mohaideen N, Murphy KC, Boshoff HI, Mizrahi V, Rubin EJ, Sassetti CM, Barry CE, 3rd, Sherman DR, Parish T, Sacchettini JC. 2013. Identification of new drug targets and resistance mechanisms in Mycobacterium tuberculosis. PLoS One 8:e75245. doi:10.1371/journal. pone.0075245
-
(2013)
PLoS One
, vol.8
-
-
Ioerger, T.R.1
O'Malley, T.2
Liao, R.3
Guinn, K.M.4
Hickey, M.J.5
Mohaideen, N.6
Murphy, K.C.7
Boshoff, H.I.8
Mizrahi, V.9
Rubin, E.J.10
Sassetti, C.M.11
Barry, C.E.12
Sherman, D.R.13
Parish, T.14
Sacchettini, J.C.15
-
354
-
-
77955561819
-
Recombineering using RecTE from Pseudomonas syringae
-
Swingle B, Bao Z, Markel E, Chambers A, Cartinhour S. 2010. Recombineering using RecTE from Pseudomonas syringae. Appl Environ Microbiol 76:4960-4968
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 4960-4968
-
-
Swingle, B.1
Bao, Z.2
Markel, E.3
Chambers, A.4
Cartinhour, S.5
-
355
-
-
0033764683
-
Sequence of the genome of the temperate, serotype-converting, Pseudomonas aeruginosa bacteriophage D3
-
Kropinski AM. 2000. Sequence of the genome of the temperate, serotype-converting, Pseudomonas aeruginosa bacteriophage D3. J Bacteriol 182:6066-6074
-
(2000)
J Bacteriol
, vol.182
, pp. 6066-6074
-
-
Kropinski, A.M.1
-
356
-
-
0037452723
-
PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin
-
Gust B, Challis GL, Fowler K, Kieser T, Chater KF. 2003. PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin. Proc Natl Acad Sci USA 100:1541-1546
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 1541-1546
-
-
Gust, B.1
Challis, G.L.2
Fowler, K.3
Kieser, T.4
Chater, K.F.5
-
357
-
-
15744370033
-
Heterologous expression of a myxobacterial natural products assembly line in pseudomonads via red/ET recombineering
-
Wenzel SC, Gross F, Zhang Y, Fu J, Stewart AF, Muller R. 2005. Heterologous expression of a myxobacterial natural products assembly line in pseudomonads via red/ET recombineering. Chem Biol 12:349-356
-
(2005)
Chem Biol
, vol.12
, pp. 349-356
-
-
Wenzel, S.C.1
Gross, F.2
Zhang, Y.3
Fu, J.4
Stewart, A.F.5
Muller, R.6
-
358
-
-
55249090459
-
Efficient transfer of two large secondary metabolite pathway gene clusters into heterologous hosts by transposition
-
Fu J, Wenzel SC, Perlova O, Wang J, Gross F, Tang Z, Yin Y, Stewart AF, Muller R, Zhang Y. 2008. Efficient transfer of two large secondary metabolite pathway gene clusters into heterologous hosts by transposition. Nucleic Acids Res 36:e113. doi:10.1093/nar/gkn499
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Fu, J.1
Wenzel, S.C.2
Perlova, O.3
Wang, J.4
Gross, F.5
Tang, Z.6
Yin, Y.7
Stewart, A.F.8
Muller, R.9
Zhang, Y.10
-
359
-
-
65849386647
-
Use of the lambda Red-recombineering method for genetic engineering of Pantoea ananatis
-
Katashkina JI, Hara Y, Golubeva LI, Andreeva IG, Kuvaeva TM, Mashko SV. 2009. Use of the lambda Red-recombineering method for genetic engineering of Pantoea ananatis. BMC Mol Biol 10:34. doi:10.1186/1471-2199-10-34
-
(2009)
BMC Mol Biol
, vol.10
, pp. 34
-
-
Katashkina, J.I.1
Hara, Y.2
Golubeva, L.I.3
Andreeva, I.G.4
Kuvaeva, T.M.5
Mashko, S.V.6
-
360
-
-
84896724199
-
Genome engineering of Agrobacterium tumefaciens using the lambda Red recombination system
-
Hu S, Fu J, Huang F, Ding X, Stewart AF, Xia L, Zhang Y. 2014. Genome engineering of Agrobacterium tumefaciens using the lambda Red recombination system. Appl Microbiol Biotechnol 98:2165-2172
-
(2014)
Appl Microbiol Biotechnol
, vol.98
, pp. 2165-2172
-
-
Hu, S.1
Fu, J.2
Huang, F.3
Ding, X.4
Stewart, A.F.5
Xia, L.6
Zhang, Y.7
-
361
-
-
84857498858
-
High efficiency recombineering in lactic acid bacteria
-
van Pijkeren JP, Britton RA. 2012. High efficiency recombineering in lactic acid bacteria. Nucleic Acids Res 40:e76. doi:10.1093/nar/gks147
-
(2012)
Nucleic Acids Res
, vol.40
-
-
van Pijkeren, J.P.1
Britton, R.A.2
-
362
-
-
84929948449
-
A high-efficiency recombineering system with PCR-based ssDNA in Bacillus subtilis mediated by the native phage recombinase GP35
-
Sun Z, Deng A, Hu T, Wu J, Sun Q, Bai H, Zhang G, Wen T. 2015. A high-efficiency recombineering system with PCR-based ssDNA in Bacillus subtilis mediated by the native phage recombinase GP35. Appl Microbiol Biotechnol 99:5151-5162
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 5151-5162
-
-
Sun, Z.1
Deng, A.2
Hu, T.3
Wu, J.4
Sun, Q.5
Bai, H.6
Zhang, G.7
Wen, T.8
-
363
-
-
84893425107
-
A functional recT gene for recombineering of Clostridium
-
Dong H, Tao W, Gong F, Li Y, Zhang Y. 2014. A functional recT gene for recombineering of Clostridium. J Biotechnol 173:65-67
-
(2014)
J Biotechnol
, vol.173
, pp. 65-67
-
-
Dong, H.1
Tao, W.2
Gong, F.3
Li, Y.4
Zhang, Y.5
-
364
-
-
40349101854
-
Identification and analysis of recombineering functions from Gram-negative and Gram-positive bacteria and their phages
-
Datta S, Costantino N, Zhou X, Court DL. 2008. Identification and analysis of recombineering functions from Gram-negative and Gram-positive bacteria and their phages. Proc Natl Acad Sci USA 105:1626-1631
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 1626-1631
-
-
Datta, S.1
Costantino, N.2
Zhou, X.3
Court, D.L.4
-
365
-
-
84936960156
-
A new recombineering system for Photorhabdus and Xenorhabdus
-
Yin J, Zhu H, Xia L, Ding X, Hoffmann T, Hoffmann M, Bian X, Muller R, Fu J, Stewart AF, Zhang Y. 2015. A new recombineering system for Photorhabdus and Xenorhabdus. Nucleic Acids Res 43:e36. doi:10.1093/nar/gku1336
-
(2015)
Nucleic Acids Res
, vol.43
-
-
Yin, J.1
Zhu, H.2
Xia, L.3
Ding, X.4
Hoffmann, T.5
Hoffmann, M.6
Bian, X.7
Muller, R.8
Fu, J.9
Stewart, A.F.10
Zhang, Y.11
-
366
-
-
0028485650
-
Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942
-
Cunningham FX, Jr, Sun Z, Chamovitz D, Hirschberg J, Gantt E. 1994. Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942. Plant Cell 6:1107-1121
-
(1994)
Plant Cell
, vol.6
, pp. 1107-1121
-
-
Cunningham, F.X.1
Sun, Z.2
Chamovitz, D.3
Hirschberg, J.4
Gantt, E.5
-
367
-
-
84861963767
-
Genome-scale promoter engineering by coselection MAGE
-
Wang HH, Kim H, Cong L, Jeong J, Bang D, Church GM. 2012. Genome-scale promoter engineering by coselection MAGE. Nat Methods 9:591-593
-
(2012)
Nat Methods
, vol.9
, pp. 591-593
-
-
Wang, H.H.1
Kim, H.2
Cong, L.3
Jeong, J.4
Bang, D.5
Church, G.M.6
-
368
-
-
84959354717
-
Efficient conditional knockout targeting vector construction using coselection BAC recombineering (CoSBR)
-
Newman RJ, Roose-Girma M, Warming S. 2015. Efficient conditional knockout targeting vector construction using coselection BAC recombineering (CoSBR). Nucleic Acids Res 43:e124. doi:10.1093/nar/gkv600
-
(2015)
Nucleic Acids Res
, vol.43
-
-
Newman, R.J.1
Roose-Girma, M.2
Warming, S.3
-
369
-
-
33845614522
-
The involvement of replication in single stranded oligonucleotidemediated gene repair
-
Huen MS, Li XT, Lu LY, Watt RM, Liu DP, Huang JD. 2006. The involvement of replication in single stranded oligonucleotidemediated gene repair. Nucleic Acids Res 34:6183-6194
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 6183-6194
-
-
Huen, M.S.1
Li, X.T.2
Lu, L.Y.3
Watt, R.M.4
Liu, D.P.5
Huang, J.D.6
-
370
-
-
32844470294
-
Physical incorporation of a single-stranded oligodeoxynucleotide during targeted repair of a human chromosomal locus
-
Radecke S, Radecke F, Peter I, Schwarz K. 2006. Physical incorporation of a single-stranded oligodeoxynucleotide during targeted repair of a human chromosomal locus. J Gene Med 8:217-228
-
(2006)
J Gene Med
, vol.8
, pp. 217-228
-
-
Radecke, S.1
Radecke, F.2
Peter, I.3
Schwarz, K.4
-
371
-
-
21244442328
-
Discontinuous or semi-discontinuous DNA replication in Escherichia coli?
-
Wang TC. 2005. Discontinuous or semi-discontinuous DNA replication in Escherichia coli? Bioessays 27:633-636
-
(2005)
Bioessays
, vol.27
, pp. 633-636
-
-
Wang, T.C.1
-
372
-
-
0028093437
-
An explanation for lagging strand replication: polymerase hopping among DNA sliding clamps
-
Stukenberg PT, Turner J, O'Donnell M. 1994. An explanation for lagging strand replication: polymerase hopping among DNA sliding clamps. Cell 78:877-887
-
(1994)
Cell
, vol.78
, pp. 877-887
-
-
Stukenberg, P.T.1
Turner, J.2
O'Donnell, M.3
-
373
-
-
0029053989
-
Assembly of a chromosomal replication machine: two DNA polymerases, a clamp loader, and sliding clamps in one holoenzyme particle. III. Interface between two polymerases and the clamp loader
-
Onrust R, Finkelstein J, Turner J, Naktinis V, O'Donnell M. 1995. Assembly of a chromosomal replication machine: two DNA polymerases, a clamp loader, and sliding clamps in one holoenzyme particle. III. Interface between two polymerases and the clamp loader. J Biol Chem 270:13366-13377
-
(1995)
J Biol Chem
, vol.270
, pp. 13366-13377
-
-
Onrust, R.1
Finkelstein, J.2
Turner, J.3
Naktinis, V.4
O'Donnell, M.5
-
374
-
-
84866010111
-
Improving lambda red genome engineering in Escherichia coli via rational removal of endogenous nucleases
-
Mosberg JA, Gregg CJ, Lajoie MJ, Wang HH, Church GM. 2012. Improving lambda red genome engineering in Escherichia coli via rational removal of endogenous nucleases. PLoS One 7:e44638. doi:10.1371/journal.pone.0044638
-
(2012)
PLoS One
, vol.7
-
-
Mosberg, J.A.1
Gregg, C.J.2
Lajoie, M.J.3
Wang, H.H.4
Church, G.M.5
-
375
-
-
84871247687
-
Manipulating replisome dynamics to enhance lambda Red-mediated multiplex genome engineering
-
Lajoie MJ, Gregg CJ, Mosberg JA, Washington GC, Church GM. 2012. Manipulating replisome dynamics to enhance lambda Red-mediated multiplex genome engineering. Nucleic Acids Res 40: e170. doi:10.1093/nar/gks751
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Lajoie, M.J.1
Gregg, C.J.2
Mosberg, J.A.3
Washington, G.C.4
Church, G.M.5
-
376
-
-
0038472057
-
Recombineering with overlapping single-stranded DNA oligonucleotides: testing a recombination intermediate
-
Yu D, Sawitzke JA, Ellis H, Court DL. 2003. Recombineering with overlapping single-stranded DNA oligonucleotides: testing a recombination intermediate. Proc Natl Acad Sci USA 100:7202-7212
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 7202-7212
-
-
Yu, D.1
Sawitzke, J.A.2
Ellis, H.3
Court, D.L.4
-
377
-
-
0033624563
-
RecE/RecT and Redalpha/Redbeta initiate double-stranded break repair by specifically interacting with their respective partners
-
Muyrers JP, Zhang Y, Buchholz F, Stewart AF. 2000. RecE/RecT and Redalpha/Redbeta initiate double-stranded break repair by specifically interacting with their respective partners. Genes Dev 14:1971-1982
-
(2000)
Genes Dev
, vol.14
, pp. 1971-1982
-
-
Muyrers, J.P.1
Zhang, Y.2
Buchholz, F.3
Stewart, A.F.4
-
378
-
-
78951480559
-
Lambda Red recombination in Escherichia coli occurs through a fully single-stranded intermediate
-
Mosberg JA, Lajoie MJ, Church GM. 2010. Lambda Red recombination in Escherichia coli occurs through a fully single-stranded intermediate. Genetics 186:791-799
-
(2010)
Genetics
, vol.186
, pp. 791-799
-
-
Mosberg, J.A.1
Lajoie, M.J.2
Church, G.M.3
-
379
-
-
56949084194
-
Lagging strand-biased initiation of red recombination by linear double-stranded DNAs
-
Lim SI, Min BE, Jung GY. 2008. Lagging strand-biased initiation of red recombination by linear double-stranded DNAs. J Mol Biol 384:1098-1105
-
(2008)
J Mol Biol
, vol.384
, pp. 1098-1105
-
-
Lim, S.I.1
Min, B.E.2
Jung, G.Y.3
-
380
-
-
77951574871
-
The terminal 5' phosphate and proximate phosphorothioate promote ligation-independent cloning
-
Liu XP, Liu JH. 2010. The terminal 5' phosphate and proximate phosphorothioate promote ligation-independent cloning. Protein Sci 19:967-973
-
(2010)
Protein Sci
, vol.19
, pp. 967-973
-
-
Liu, X.P.1
Liu, J.H.2
-
382
-
-
6044239898
-
Lysogenicity in Escherichia coli K-12
-
Lederberg EM. 1950. Lysogenicity in Escherichia coli K-12. Microb Genet Bull 1:5-9 (http://www.estherlederberg.com/LambdaP.html)
-
(1950)
Microb Genet Bull
, vol.1
, pp. 5-9
-
-
Lederberg, E.M.1
-
384
-
-
0021343045
-
Exonuclease I, III and V are required for stability of ColE1-related plasmids in Escherichia coli
-
Bassett CL, Kushner SR. 1984. Exonuclease I, III and V are required for stability of ColE1-related plasmids in Escherichia coli. J Bacteriol 157:661-664
-
(1984)
J Bacteriol
, vol.157
, pp. 661-664
-
-
Bassett, C.L.1
Kushner, S.R.2
-
387
-
-
3042615627
-
Holliday junction binding and resolution by the Rap structure-specific endonuclease of phage lambda
-
Sharples GJ, Curtis FA, McGlynn P, Bolt EL. 2004. Holliday junction binding and resolution by the Rap structure-specific endonuclease of phage lambda. J Mol Biol 340:739-751
-
(2004)
J Mol Biol
, vol.340
, pp. 739-751
-
-
Sharples, G.J.1
Curtis, F.A.2
McGlynn, P.3
Bolt, E.L.4
-
388
-
-
29644444283
-
An improved recombineering approach by adding RecA to lambda Red recombination
-
Wang J, Sarov M, Rientjes J, Fu J, Hollak H, Kranz H, Xie W, Stewart AF, Zhang Y. 2006. An improved recombineering approach by adding RecA to lambda Red recombination. Mol Biotechnol 32:43-53
-
(2006)
Mol Biotechnol
, vol.32
, pp. 43-53
-
-
Wang, J.1
Sarov, M.2
Rientjes, J.3
Fu, J.4
Hollak, H.5
Kranz, H.6
Xie, W.7
Stewart, A.F.8
Zhang, Y.9
-
389
-
-
0034682030
-
A family of removable cassettes designed to obtain antibiotic-resistance-free genomic modifications of Escherichia coli and other bacteria
-
Palmeros B, Wild J, Szybalski W, Le Borgne S, Hernandez-Chavez G, Gosset G, Valle F, Bolivar F. 2000. A family of removable cassettes designed to obtain antibiotic-resistance-free genomic modifications of Escherichia coli and other bacteria. Gene 247:255-264
-
(2000)
Gene
, vol.247
, pp. 255-264
-
-
Palmeros, B.1
Wild, J.2
Szybalski, W.3
Le Borgne, S.4
Hernandez-Chavez, G.5
Gosset, G.6
Valle, F.7
Bolivar, F.8
-
390
-
-
0035933760
-
An araC-controlled bacterial cre expression system to produce DNA minicircle vectors for nuclear and mitochondrial gene therapy
-
Bigger BW, Tolmachov O, Collombet JM, Fragkos M, Palaszewski I, Coutelle C. 2001. An araC-controlled bacterial cre expression system to produce DNA minicircle vectors for nuclear and mitochondrial gene therapy. J Biol Chem 276:23018-23027
-
(2001)
J Biol Chem
, vol.276
, pp. 23018-23027
-
-
Bigger, B.W.1
Tolmachov, O.2
Collombet, J.M.3
Fragkos, M.4
Palaszewski, I.5
Coutelle, C.6
-
391
-
-
0029860719
-
Different thermostabilities of FLP and Cre recombinases: implications for applied site-specific recombination
-
Buchholz F, Ringrose L, Angrand PO, Rossi F, Stewart AF. 1996. Different thermostabilities of FLP and Cre recombinases: implications for applied site-specific recombination. Nucleic Acids Res 24:4256-4262
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 4256-4262
-
-
Buchholz, F.1
Ringrose, L.2
Angrand, P.O.3
Rossi, F.4
Stewart, A.F.5
-
393
-
-
0029065955
-
Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant
-
Cherepanov PP, Wackernagel W. 1995. Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant. Gene 158:9-14
-
(1995)
Gene
, vol.158
, pp. 9-14
-
-
Cherepanov, P.P.1
Wackernagel, W.2
-
394
-
-
50849136478
-
Antibiotic marker modifications of lambda Red and FLP helper plasmids, pKD46 and pCP20, for inactivation of chromosomal genes using PCR products in multidrug-resistant strains
-
Doublet B, Douard G, Targant H, Meunier D, Madec JY, Cloeckaert A. 2008. Antibiotic marker modifications of lambda Red and FLP helper plasmids, pKD46 and pCP20, for inactivation of chromosomal genes using PCR products in multidrug-resistant strains. J Microbiol Methods 75:359-361
-
(2008)
J Microbiol Methods
, vol.75
, pp. 359-361
-
-
Doublet, B.1
Douard, G.2
Targant, H.3
Meunier, D.4
Madec, J.Y.5
Cloeckaert, A.6
-
395
-
-
84884645140
-
One-step cloning and chromosomal integration of DNA
-
St-Pierre F, Cui L, Priest DG, Endy D, Dodd IB, Shearwin KE. 2013. One-step cloning and chromosomal integration of DNA. ACS Synth Biol 2:537-541
-
(2013)
ACS Synth Biol
, vol.2
, pp. 537-541
-
-
St-Pierre, F.1
Cui, L.2
Priest, D.G.3
Endy, D.4
Dodd, I.B.5
Shearwin, K.E.6
|