-
1
-
-
0037459374
-
Interchangeable parts of the Escherichia coli recombination machinery
-
Amundsen, S.K. Smith, G.R. (2003) Interchangeable parts of the Escherichia coli recombination machinery. Cell 112 : 741 744.
-
(2003)
Cell
, vol.112
, pp. 741-744
-
-
Amundsen, S.K.1
Smith, G.R.2
-
2
-
-
0026529062
-
Characterization of the upp gene encoding uracil phosphoribosyltransferase of Escherichia coli K12
-
Andersen, P.S., Smith, J.M. Mygind, B. (1992) Characterization of the upp gene encoding uracil phosphoribosyltransferase of Escherichia coli K12. Eur J Biochem 204 : 51 56.
-
(1992)
Eur J Biochem
, vol.204
, pp. 51-56
-
-
Andersen, P.S.1
Smith, J.M.2
Mygind, B.3
-
3
-
-
0024769286
-
Homologous recombination involving small single-stranded oligonucleotides in human cells
-
Campbell, C.R., Keown, W., Lowe, L., Kirschling, D. Kucherlapati, R. (1989) Homologous recombination involving small single-stranded oligonucleotides in human cells. New Biol 1 : 223 227.
-
(1989)
New Biol
, vol.1
, pp. 223-227
-
-
Campbell, C.R.1
Keown, W.2
Lowe, L.3
Kirschling, D.4
Kucherlapati, R.5
-
4
-
-
0015212269
-
Mechanism for the action of lambda exonuclease in genetic recombination
-
Cassuto, E. Radding, C.M. (1971) Mechanism for the action of lambda exonuclease in genetic recombination. Nat New Biol 229 : 13 16.
-
(1971)
Nat New Biol
, vol.229
, pp. 13-16
-
-
Cassuto, E.1
Radding, C.M.2
-
5
-
-
32244448730
-
A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: Application for DNA fragment transfer between chromosomes and plasmid transformation
-
Choi, K.H., Kumar, A. Schweizer, H.P. (2006) A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. J Microbiol Methods 64 : 391 397.
-
(2006)
J Microbiol Methods
, vol.64
, pp. 391-397
-
-
Choi, K.H.1
Kumar, A.2
Schweizer, H.P.3
-
6
-
-
0346103663
-
Enhanced levels of lambda Red-mediated recombinants in mismatch repair mutants
-
Costantino, N. Court, D.L. (2003) Enhanced levels of lambda Red-mediated recombinants in mismatch repair mutants. Proc Natl Acad Sci USA 100 : 15748 15753.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 15748-15753
-
-
Costantino, N.1
Court, D.L.2
-
7
-
-
0036953835
-
Genetic engineering using homologous recombination
-
Court, D.L., Sawitzke, J.A. Thomason, L.C. (2002) Genetic engineering using homologous recombination. Annu Rev Genet 36 : 361 388.
-
(2002)
Annu Rev Genet
, vol.36
, pp. 361-388
-
-
Court, D.L.1
Sawitzke, J.A.2
Thomason, L.C.3
-
8
-
-
33747333128
-
A set of recombineering plasmids for gram-negative bacteria
-
Datta, S., Costantino, N. Court, D.L. (2006) A set of recombineering plasmids for gram-negative bacteria. Gene 379 : 109 115.
-
(2006)
Gene
, vol.379
, pp. 109-115
-
-
Datta, S.1
Costantino, N.2
Court, D.L.3
-
9
-
-
40349101854
-
Identification and analysis of recombineering functions from Gram-negative and Gram-positive bacteria and their phages
-
Datta, S., Costantino, N., Zhou, X. Court, D.L. (2008) Identification and analysis of recombineering functions from Gram-negative and Gram-positive bacteria and their phages. Proc Natl Acad Sci USA 105 : 1626 1631.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 1626-1631
-
-
Datta, S.1
Costantino, N.2
Zhou, X.3
Court, D.L.4
-
10
-
-
33846083163
-
RecA-independent recombination is efficient but limited by exonucleases
-
Jr
-
Dutra, B.E., Sutera, V.A., Jr, Lovett, S.T. (2007) RecA-independent recombination is efficient but limited by exonucleases. Proc Natl Acad Sci USA 104 : 216 221.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 216-221
-
-
Dutra, B.E.1
Sutera, V.A.2
Lovett, S.T.3
-
11
-
-
0035810938
-
High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides
-
Ellis, H.M., Yu, D., DiTizio, T. Court, D.L. (2001) High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides. Proc Natl Acad Sci USA 98 : 6742 6746.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 6742-6746
-
-
Ellis, H.M.1
Yu, D.2
Ditizio, T.3
Court, D.L.4
-
12
-
-
49249131279
-
Recombination of synthetic oligonucleotides with prokaryotic chromosomes: Substrate requirements of the Escherichia coli/lambdaRed and Sulfolobus acidocaldarius recombination systems
-
Grogan, D.W. Stengel, K.R. (2008) Recombination of synthetic oligonucleotides with prokaryotic chromosomes: substrate requirements of the Escherichia coli/lambdaRed and Sulfolobus acidocaldarius recombination systems. Mol Microbiol 69 : 1255 1265.
-
(2008)
Mol Microbiol
, vol.69
, pp. 1255-1265
-
-
Grogan, D.W.1
Stengel, K.R.2
-
13
-
-
0027391504
-
Identification and characterization of the Escherichia coli RecT protein, a protein encoded by the recE region that promotes renaturation of homologous single-stranded DNA
-
Hall, S.D., Kane, M.F. Kolodner, R.D. (1993) Identification and characterization of the Escherichia coli RecT protein, a protein encoded by the recE region that promotes renaturation of homologous single-stranded DNA. J Bacteriol 175 : 277 287.
-
(1993)
J Bacteriol
, vol.175
, pp. 277-287
-
-
Hall, S.D.1
Kane, M.F.2
Kolodner, R.D.3
-
14
-
-
9144244444
-
Classification and evolutionary history of the single-strand annealing proteins, RecT, Redbeta, ERF and RAD52
-
Iyer, L.M., Koonin, E.V. Aravind, L. (2002) Classification and evolutionary history of the single-strand annealing proteins, RecT, Redbeta, ERF and RAD52. BMC Genomics 3 : 8.
-
(2002)
BMC Genomics
, vol.3
, pp. 8
-
-
Iyer, L.M.1
Koonin, E.V.2
Aravind, L.3
-
15
-
-
0032489495
-
The beta protein of phage lambda binds preferentially to an intermediate in DNA renaturation
-
Karakousis, G., Ye, N., Li, Z., Chiu, S.K., Reddy, G. Radding, C.M. (1998) The beta protein of phage lambda binds preferentially to an intermediate in DNA renaturation. J Mol Biol 276 : 721 731.
-
(1998)
J Mol Biol
, vol.276
, pp. 721-731
-
-
Karakousis, G.1
Ye, N.2
Li, Z.3
Chiu, S.K.4
Reddy, G.5
Radding, C.M.6
-
16
-
-
65849386647
-
Use of the lambda Red-recombineering method for genetic engineering of Pantoea ananatis
-
Katashkina, J.I., Hara, Y., Golubeva, L.I., Andreeva, I.G., Kuvaeva, T.M. Mashko, S.V. (2009) Use of the lambda Red-recombineering method for genetic engineering of Pantoea ananatis. BMC Mol Biol 10 : 34.
-
(2009)
BMC Mol Biol
, vol.10
, pp. 34
-
-
Katashkina, J.I.1
Hara, Y.2
Golubeva, L.I.3
Andreeva, I.G.4
Kuvaeva, T.M.5
Mashko, S.V.6
-
17
-
-
33947357684
-
Recombineering in Mycobacterium tuberculosis
-
van Kessel, J.C. Hatfull, G.F. (2007) Recombineering in Mycobacterium tuberculosis. Nat Methods 4 : 147 152.
-
(2007)
Nat Methods
, vol.4
, pp. 147-152
-
-
Van Kessel, J.C.1
Hatfull, G.F.2
-
18
-
-
38849190026
-
Efficient point mutagenesis in mycobacteria using single-stranded DNA recombineering: Characterization of antimycobacterial drug targets
-
van Kessel, J.C. Hatfull, G.F. (2008) Efficient point mutagenesis in mycobacteria using single-stranded DNA recombineering: characterization of antimycobacterial drug targets. Mol Microbiol 67 : 1094 1107.
-
(2008)
Mol Microbiol
, vol.67
, pp. 1094-1107
-
-
Van Kessel, J.C.1
Hatfull, G.F.2
-
20
-
-
43349086724
-
Two simple media for the demonstration of pyocyanin and fluorescin
-
King, E.O., Ward, M.K. Raney, D.E. (1954) Two simple media for the demonstration of pyocyanin and fluorescin. J Lab Clin Med 44 : 301 307.
-
(1954)
J Lab Clin Med
, vol.44
, pp. 301-307
-
-
King, E.O.1
Ward, M.K.2
Raney, D.E.3
-
21
-
-
0019854161
-
Beta protein of bacteriophage lambda promotes renaturation of DNA
-
Kmiec, E. Holloman, W.K. (1981) Beta protein of bacteriophage lambda promotes renaturation of DNA. J Biol Chem 256 : 12636 12639.
-
(1981)
J Biol Chem
, vol.256
, pp. 12636-12639
-
-
Kmiec, E.1
Holloman, W.K.2
-
22
-
-
0021687639
-
Different base/base mismatches are corrected with different efficiencies by the methyl-directed DNA mismatch-repair system of E. coli
-
Kramer, B., Kramer, W. Fritz, H.J. (1984) Different base/base mismatches are corrected with different efficiencies by the methyl-directed DNA mismatch-repair system of E. coli. Cell 38 : 879 887.
-
(1984)
Cell
, vol.38
, pp. 879-887
-
-
Kramer, B.1
Kramer, W.2
Fritz, H.J.3
-
23
-
-
0032715175
-
Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda
-
table of contents
-
Kuzminov, A. (1999) Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda. Microbiol Mol Biol Rev 63 : 751 813, table of contents.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 751-813
-
-
Kuzminov, A.1
-
24
-
-
41549105328
-
Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa
-
Lesic, B. Rahme, L.G. (2008) Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa. BMC Mol Biol 9 : 20.
-
(2008)
BMC Mol Biol
, vol.9
, pp. 20
-
-
Lesic, B.1
Rahme, L.G.2
-
25
-
-
0344668833
-
Identification of factors influencing strand bias in oligonucleotide- mediated recombination in Escherichia coli
-
Li, X.T., Costantino, N., Lu, L.Y., Liu, D.P., Watt, R.M., Cheah, K.S., et al. (2003) Identification of factors influencing strand bias in oligonucleotide-mediated recombination in Escherichia coli. Nucleic Acids Res 31 : 6674 6687.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6674-6687
-
-
Li, X.T.1
Costantino, N.2
Lu, L.Y.3
Liu, D.P.4
Watt, R.M.5
Cheah, K.S.6
-
26
-
-
0014216084
-
An exonuclease induced by bacteriophage lambda. II. Nature of the enzymatic reaction
-
Little, J.W. (1967) An exonuclease induced by bacteriophage lambda. II. Nature of the enzymatic reaction. J Biol Chem 242 : 679 686.
-
(1967)
J Biol Chem
, vol.242
, pp. 679-686
-
-
Little, J.W.1
-
27
-
-
0036193882
-
Crossing over between regions of limited homology in Escherichia coli. RecA-dependent and RecA-independent pathways
-
Jr
-
Lovett, S.T., Hurley, R.L., Sutera, V.A., Jr, Aubuchon, R.H. Lebedeva, M.A. (2002) Crossing over between regions of limited homology in Escherichia coli. RecA-dependent and RecA-independent pathways. Genetics 160 : 851 859.
-
(2002)
Genetics
, vol.160
, pp. 851-859
-
-
Lovett, S.T.1
Hurley, R.L.2
Sutera, V.A.3
Aubuchon, R.H.4
Lebedeva, M.A.5
-
28
-
-
0035997347
-
The bacterial RecA protein and the recombinational DNA repair of stalled replication forks
-
Lusetti, S.L. Cox, M.M. (2002) The bacterial RecA protein and the recombinational DNA repair of stalled replication forks. Annu Rev Biochem 71 : 71 100.
-
(2002)
Annu Rev Biochem
, vol.71
, pp. 71-100
-
-
Lusetti, S.L.1
Cox, M.M.2
-
30
-
-
0031924072
-
Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli
-
Murphy, K.C. (1998) Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli. J Bacteriol 180 : 2063 2071.
-
(1998)
J Bacteriol
, vol.180
, pp. 2063-2071
-
-
Murphy, K.C.1
-
31
-
-
0030571482
-
Characterization of the DNA-binding domain of beta protein, a component of phage lambda red-pathway, by UV catalyzed cross-linking
-
Mythili, E., Kumar, K.A. Muniyappa, K. (1996) Characterization of the DNA-binding domain of beta protein, a component of phage lambda red-pathway, by UV catalyzed cross-linking. Gene 182 : 81 87.
-
(1996)
Gene
, vol.182
, pp. 81-87
-
-
Mythili, E.1
Kumar, K.A.2
Muniyappa, K.3
-
32
-
-
0026536644
-
Repair of DNA heteroduplexes containing small heterologous sequences in Escherichia coli
-
Parker, B.O. Marinus, M.G. (1992) Repair of DNA heteroduplexes containing small heterologous sequences in Escherichia coli. Proc Natl Acad Sci USA 89 : 1730 1734.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 1730-1734
-
-
Parker, B.O.1
Marinus, M.G.2
-
33
-
-
0035838535
-
What makes the bacteriophage lambda Red system useful for genetic engineering: Molecular mechanism and biological function
-
Poteete, A.R. (2001) What makes the bacteriophage lambda Red system useful for genetic engineering: molecular mechanism and biological function. FEMS Microbiol Lett 201 : 9 14.
-
(2001)
FEMS Microbiol Lett
, vol.201
, pp. 9-14
-
-
Poteete, A.R.1
-
34
-
-
0015003475
-
Fluorouracil and the isolation of mutants lacking uridine phosphorylase in Escherichia coli: Location of the gene
-
Pritchard, R.H. Ahmad, S.I. (1971) Fluorouracil and the isolation of mutants lacking uridine phosphorylase in Escherichia coli: location of the gene. Mol Gen Genet 111 : 84 88.
-
(1971)
Mol Gen Genet
, vol.111
, pp. 84-88
-
-
Pritchard, R.H.1
Ahmad, S.I.2
-
35
-
-
33745812873
-
Developing live Shigella vaccines using lambda Red recombineering
-
Ranallo, R.T., Barnoy, S., Thakkar, S., Urick, T. Venkatesan, M.M. (2006) Developing live Shigella vaccines using lambda Red recombineering. FEMS Immunol Med Microbiol 47 : 462 469.
-
(2006)
FEMS Immunol Med Microbiol
, vol.47
, pp. 462-469
-
-
Ranallo, R.T.1
Barnoy, S.2
Thakkar, S.3
Urick, T.4
Venkatesan, M.M.5
-
36
-
-
33847654324
-
Recombineering: In vivo genetic engineering in E. coli, S. enterica, and beyond
-
Sawitzke, J.A., Thomason, L.C., Costantino, N., Bubunenko, M., Datta, S. Court, D.L. (2007) Recombineering: in vivo genetic engineering in E. coli, S. enterica, and beyond. Methods Enzymol 421 : 171 199.
-
(2007)
Methods Enzymol
, vol.421
, pp. 171-199
-
-
Sawitzke, J.A.1
Thomason, L.C.2
Costantino, N.3
Bubunenko, M.4
Datta, S.5
Court, D.L.6
-
37
-
-
59849119654
-
Recombineering: A homologous recombination-based method of genetic engineering
-
Sharan, S.K., Thomason, L.C., Kuznetsov, S.G. Court, D.L. (2009) Recombineering: a homologous recombination-based method of genetic engineering. Nat Protoc 4 : 206 223.
-
(2009)
Nat Protoc
, vol.4
, pp. 206-223
-
-
Sharan, S.K.1
Thomason, L.C.2
Kuznetsov, S.G.3
Court, D.L.4
-
38
-
-
23944475626
-
Mechanisms of, and barriers to, horizontal gene transfer between bacteria
-
Thomas, C.M. Nielsen, K.M. (2005) Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat Rev Microbiol 3 : 711 721.
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 711-721
-
-
Thomas, C.M.1
Nielsen, K.M.2
-
39
-
-
0026445689
-
Parameters affecting the frequencies of transformation and co-transformation with synthetic oligonucleotides in yeast
-
Yamamoto, T., Moerschell, R.P., Wakem, L.P., Ferguson, D. Sherman, F. (1992a) Parameters affecting the frequencies of transformation and co-transformation with synthetic oligonucleotides in yeast. Yeast 8 : 935 948.
-
(1992)
Yeast
, vol.8
, pp. 935-948
-
-
Yamamoto, T.1
Moerschell, R.P.2
Wakem, L.P.3
Ferguson, D.4
Sherman, F.5
-
40
-
-
0026704096
-
Strand-specificity in the transformation of yeast with synthetic oligonucleotides
-
Yamamoto, T., Moerschell, R.P., Wakem, L.P., Komar-Panicucci, S. Sherman, F. (1992b) Strand-specificity in the transformation of yeast with synthetic oligonucleotides. Genetics 131 : 811 819.
-
(1992)
Genetics
, vol.131
, pp. 811-819
-
-
Yamamoto, T.1
Moerschell, R.P.2
Wakem, L.P.3
Komar-Panicucci, S.4
Sherman, F.5
-
41
-
-
0034705144
-
An efficient recombination system for chromosome engineering in Escherichia coli
-
Yu, D., Ellis, H.M., Lee, E.C., Jenkins, N.A., Copeland, N.G. Court, D.L. (2000) An efficient recombination system for chromosome engineering in Escherichia coli. Proc Natl Acad Sci USA 97 : 5978 5983.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 5978-5983
-
-
Yu, D.1
Ellis, H.M.2
Lee, E.C.3
Jenkins, N.A.4
Copeland, N.G.5
Court, D.L.6
-
42
-
-
0031664853
-
A new logic for DNA engineering using recombination in Escherichia coli
-
Zhang, Y., Buchholz, F., Muyrers, J.P. Stewart, A.F. (1998) A new logic for DNA engineering using recombination in Escherichia coli. Nat Genet 20 : 123 128.
-
(1998)
Nat Genet
, vol.20
, pp. 123-128
-
-
Zhang, Y.1
Buchholz, F.2
Muyrers, J.P.3
Stewart, A.F.4
-
43
-
-
2542503672
-
Phage annealing proteins promote oligonucleotide-directed mutagenesis in Escherichia coli and mouse ES cells
-
Zhang, Y., Muyrers, J.P., Rientjes, J. Stewart, A.F. (2003) Phage annealing proteins promote oligonucleotide-directed mutagenesis in Escherichia coli and mouse ES cells. BMC Mol Biol 4 : 1.
-
(2003)
BMC Mol Biol
, vol.4
, pp. 1
-
-
Zhang, Y.1
Muyrers, J.P.2
Rientjes, J.3
Stewart, A.F.4
|