-
1
-
-
33646722147
-
Emergent properties of reduced genome Escherichia coli
-
10.1126/science.1126439. 16645050
-
Emergent properties of reduced genome Escherichia coli. G Pásfai GIII Plunkett T Feher D Frisch GM Keil K Umenhoffer V Kolisnychenko B Stahl SS Sharma M de Arruda V Burland SW Harcum FR Blattner, Science 2006 312 1044 1046 10.1126/science.1126439 16645050
-
(2006)
Science
, vol.312
, pp. 1044-1046
-
-
Pásfai, G.1
Giii, P.2
Feher, T.3
Frisch, D.4
Keil, G.M.5
Umenhoffer, K.6
Kolisnychenko, V.7
Stahl, B.8
Sharma, S.S.9
De Arruda, M.10
Burland, V.11
Harcum, S.W.12
Blattner, F.R.13
-
2
-
-
20444426804
-
Large-scale engineering of the Corynebacterium glutamicum genome
-
10.1128/AEM.71.6.3369-3372.2005. 15933044
-
Large-scale engineering of the Corynebacterium glutamicum genome. N Suzuki S Okayama H Nonaka Y Tsuge M Inui H Yukawa, Appl Environ Microbiol 2005 71 3369 3372 10.1128/AEM.71.6.3369-3372.2005 15933044
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 3369-3372
-
-
Suzuki, N.1
Okayama, S.2
Nonaka, H.3
Tsuge, Y.4
Inui, M.5
Yukawa, H.6
-
3
-
-
0347986769
-
Genome engineering reveals large dispensable regions in Bacillus subtilis
-
10.1093/molbev/msg219. 12949151
-
Genome engineering reveals large dispensable regions in Bacillus subtilis. H Westers R Dorenbos JM van Dijl J Kabel T Flanagan KM Devine F Jude SJ Seror AC Beekman E Darmon C Eschevins A de Jong S Bron OP Kuipers AM Albertini H Antelmann M Hecker N Zamboni U Sauer C Bruand DS Ehrlich JC Alonso M Salas WJ Quax, Mol Biol Evol 2003 20 2076 2090 10.1093/molbev/msg219 12949151
-
(2003)
Mol Biol Evol
, vol.20
, pp. 2076-2090
-
-
Westers, H.1
Dorenbos, R.2
Van Dijl, J.M.3
Kabel, J.4
Flanagan, T.5
Devine, K.M.6
Jude, F.7
Seror, S.J.8
Beekman, A.C.9
Darmon, E.10
Eschevins, C.11
De Jong, A.12
Bron, S.13
Kuipers, O.P.14
Albertini, A.M.15
Antelmann, H.16
Hecker, M.17
Zamboni, N.18
Sauer, U.19
Bruand, C.20
Ehrlich, D.S.21
Alonso, J.C.22
Salas, M.23
Quax, W.J.24
more..
-
4
-
-
0035337803
-
Techniques: Recombinogenic engineering - New options for cloning and manipulating DNA
-
10.1016/S0968-0004(00)01757-6. 11343926
-
Techniques: Recombinogenic engineering - new options for cloning and manipulating DNA. JP Muyrers Y Zhang AF Stewart, Trends Biochem Sci 2001 26 325 331 10.1016/S0968-0004(00)01757-6 11343926
-
(2001)
Trends Biochem Sci
, vol.26
, pp. 325-331
-
-
Muyrers, J.P.1
Zhang, Y.2
Stewart, A.F.3
-
5
-
-
0035810938
-
High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides
-
10.1073/pnas.121164898. 11381128
-
High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotides. HM Ellis D Yu T DiTizio DL Court, Proc Natl Acad Sci USA 2001 98 6742 6746 10.1073/pnas.121164898 11381128
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 6742-6746
-
-
Ellis, H.M.1
Yu, D.2
Ditizio, T.3
Court, D.L.4
-
6
-
-
0031924072
-
Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli
-
9555887
-
Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli. KC Murphy, J Bacteriol 1998 180 2063 2071 9555887
-
(1998)
J Bacteriol
, vol.180
, pp. 2063-2071
-
-
Murphy, K.C.1
-
7
-
-
0034705144
-
An efficient recombination system for chromosome engineering in Escherichia coli
-
10.1073/pnas.100127597. 10811905
-
An efficient recombination system for chromosome engineering in Escherichia coli. D Yu HM Ellis EC Lee NA Jenkins NG Copeland DL Court, Proc Natl Acad Sci USA 2000 97 5978 5983 10.1073/pnas.100127597 10811905
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 5978-5983
-
-
Yu, D.1
Ellis, H.M.2
Lee, E.C.3
Jenkins, N.A.4
Copeland, N.G.5
Court, D.L.6
-
8
-
-
0038472057
-
Recombineering with overlapping single-stranded DNA oligonucleotides: Testing a recombination intermediate
-
10.1073/pnas.1232375100. 12771385
-
Recombineering with overlapping single-stranded DNA oligonucleotides: testing a recombination intermediate. D Yu JA Sawitzke H Ellis DL Court, Proc Natl Acad Sci USA 2003 100 7207 7212 10.1073/pnas.1232375100 12771385
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 7207-7212
-
-
Yu, D.1
Sawitzke, J.A.2
Ellis, H.3
Court, D.L.4
-
9
-
-
0042196461
-
Applications of the Saccharomyces cerevisiae Flp-FRT system in bacterial genetics
-
10.1159/000069976. 12736528
-
Applications of the Saccharomyces cerevisiae Flp-FRT system in bacterial genetics. HP Schweizer, J Mol Microbiol Biotechnol 2003 5 67 77 10.1159/000069976 12736528
-
(2003)
J Mol Microbiol Biotechnol
, vol.5
, pp. 67-77
-
-
Schweizer, H.P.1
-
10
-
-
0035487293
-
Recombineering: A powerful new tool for mouse functional genomics
-
10.1038/35093556. 11584293
-
Recombineering: a powerful new tool for mouse functional genomics. NG Copeland NA Jenkins DL Court, Nat Rev Genet 2001 2 769 779 10.1038/35093556 11584293
-
(2001)
Nat Rev Genet
, vol.2
, pp. 769-779
-
-
Copeland, N.G.1
Jenkins, N.A.2
Court, D.L.3
-
11
-
-
0034739007
-
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen
-
10.1038/35023079. 10984043
-
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. CK Stover XQ Pham AL Erwin SD Mizoguchi P Warrener MJ Hickey FS Brinkman WO Hufnagle DJ Kowalik M Lagrou RL Garber L Goltry E Tolentino S Westbrock-Wadman Y Yuan LL Brody SN Coulter KR Folger A Kas K Larbig R Lim K Smith D Spencer GK Wong Z Wu IT Paulsen J Reizer MH Saier RE Hancock S Lory MV Olson, Nature 2000 406 959 964 10.1038/35023079 10984043
-
(2000)
Nature
, vol.406
, pp. 959-964
-
-
Stover, C.K.1
Pham, X.Q.2
Erwin, A.L.3
Mizoguchi, S.D.4
Warrener, P.5
Hickey, M.J.6
Brinkman, F.S.7
Hufnagle, W.O.8
Kowalik, D.J.9
Lagrou, M.10
Garber, R.L.11
Goltry, L.12
Tolentino, E.13
Westbrock-Wadman, S.14
Yuan, Y.15
Brody, L.L.16
Coulter, S.N.17
Folger, K.R.18
Kas, A.19
Larbig, K.20
Lim, R.21
Smith, K.22
Spencer, D.23
Wong, G.K.24
Wu, Z.25
Paulsen, I.T.26
Reizer, J.27
Saier, M.H.28
Hancock, R.E.29
Lory, S.30
Olson, M.V.31
more..
-
12
-
-
13544261281
-
Molecular tools for genetic analysis of pseudomonad sp
-
New York, Kluwer Academic/Plenum Ramos JL
-
Molecular tools for genetic analysis of pseudomonad sp. HP Schweizer V de Lorenzo, The Pseudomonads - Genomics, life style and molecular architecture New York, Kluwer Academic/Plenum, Ramos JL, 2004 I 317 350
-
(2004)
The Pseudomonads - Genomics, Life Style and Molecular Architecture
, vol.1
, pp. 317-350
-
-
Schweizer, H.P.1
De Lorenzo, V.2
-
13
-
-
3242726147
-
Development of tools for the genetic manipulation of Pseudomonas aeruginosa
-
DOI 10.1016/j.mimet.2004.03.018, PII S0167701204000892
-
Development of tools for the genetic manipulation of Pseudomonas aeruginosa. SJ Suh LA Silo-Suh DE Ohman, J Microbiol Method 2004 58 203 212 10.1016/j.mimet.2004.03.018 (Pubitemid 38952698)
-
(2004)
Journal of Microbiological Methods
, vol.58
, Issue.2
, pp. 203-212
-
-
Suh, S.-J.1
Silo-Suh, L.A.2
Ohman, D.E.3
-
14
-
-
1242351547
-
Analysis of regulatory networks in Pseudomonas aeruginosa by genome wide transcriptional profiling
-
10.1016/j.mib.2003.12.009. 15036138
-
Analysis of regulatory networks in Pseudomonas aeruginosa by genome wide transcriptional profiling. AL Goodman S Lory, Curr Opin Microbiol 2004 7 39 44 10.1016/j.mib.2003.12.009 15036138
-
(2004)
Curr Opin Microbiol
, vol.7
, pp. 39-44
-
-
Goodman, A.L.1
Lory, S.2
-
15
-
-
10744229659
-
Comprehensive transposon mutant library of Pseudomonas aeruginosa
-
10.1073/pnas.2036282100. 14617778
-
Comprehensive transposon mutant library of Pseudomonas aeruginosa. MA Jacobs A Alwood I Thaipisuttikul D Spencer E Haugen S Ernst O Will R Kaul C Raymond R Levy L Chun-Rong D Guenthner D Bovee MV Olson C Manoil, Proc Natl Acad Sci USA 2003 100 14339 14344 10.1073/pnas.2036282100 14617778
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 14339-14344
-
-
Jacobs, M.A.1
Alwood, A.2
Thaipisuttikul, I.3
Spencer, D.4
Haugen, E.5
Ernst, S.6
Will, O.7
Kaul, R.8
Raymond, C.9
Levy, R.10
Chun-Rong, L.11
Guenthner, D.12
Bovee, D.13
Olson, M.V.14
Manoil, C.15
-
16
-
-
0032575051
-
A broad-host-range Flp-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: Application for isolation of unmarked Pseudomonas aeruginosa mutants
-
10.1016/S0378-1119(98)00130-9. 9661666
-
A broad-host-range Flp-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: application for isolation of unmarked Pseudomonas aeruginosa mutants. TT Hoang RR Karkhoff-Schweizer AJ Kutchma HP Schweizer, Gene 1998 212 77 86 10.1016/S0378-1119(98)00130-9 9661666
-
(1998)
Gene
, vol.212
, pp. 77-86
-
-
Hoang, T.T.1
Karkhoff-Schweizer, R.R.2
Kutchma, A.J.3
Schweizer, H.P.4
-
17
-
-
12344249544
-
Combined sacB-based negative selection and cre-lox antibiotic marker recycling for efficient gene deletion in Pseudomonas aeruginosa
-
10.2144/05381ST01
-
Combined sacB-based negative selection and cre-lox antibiotic marker recycling for efficient gene deletion in Pseudomonas aeruginosa. L Quénée D Lamotte B Polack, Biotechnique 2005 38 63 67 10.2144/05381ST01
-
(2005)
Biotechnique
, vol.38
, pp. 63-67
-
-
Quénée, L.1
Lamotte, D.2
Polack, B.3
-
18
-
-
0025292817
-
Products of three accessory genes, pilB, pilC, and pilD, are required for biogenesis of Pseudomonas aeruginosa pili
-
1971619
-
Products of three accessory genes, pilB, pilC, and pilD, are required for biogenesis of Pseudomonas aeruginosa pili. D Nunn S Bergman S Lory, J Bacteriol 1990 172 2911 2919 1971619
-
(1990)
J Bacteriol
, vol.172
, pp. 2911-2919
-
-
Nunn, D.1
Bergman, S.2
Lory, S.3
-
19
-
-
0022349178
-
Regions of broad-host-range plasmid RK2 involved in replication and stable maintenance in nine species of gram-negative bacteria
-
4044529
-
Regions of broad-host-range plasmid RK2 involved in replication and stable maintenance in nine species of gram-negative bacteria. TJ Schmidhauser DR Helinski, J Bacteriol 1985 164 446 455 4044529
-
(1985)
J Bacteriol
, vol.164
, pp. 446-455
-
-
Schmidhauser, T.J.1
Helinski, D.R.2
-
20
-
-
0020776394
-
Location and nucleotide sequence of the transfer origin of the broad host range plasmid RK2
-
10.1073/pnas.80.12.3595. 6304722
-
Location and nucleotide sequence of the transfer origin of the broad host range plasmid RK2. DG Guiney E Yakobson, Proc Natl Acad Sci USA 1983 80 3595 3598 10.1073/pnas.80.12.3595 6304722
-
(1983)
Proc Natl Acad Sci USA
, vol.80
, pp. 3595-3598
-
-
Guiney, D.G.1
Yakobson, E.2
-
21
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
10.1073/pnas.120163297. 10829079
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. KA Datsenko BL Wanner, Proc Natl Acad Sci USA 2000 97 6640 6645 10.1073/pnas.120163297 10829079
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
22
-
-
2942628870
-
Excision of the high-pathogenicity island of Yersinia pseudotuberculosis requires the combined actions of its cognate integrase and Hef, a new recombination directionality factor
-
10.1111/j.1365-2958.2004.04073.x. 15165237
-
Excision of the high-pathogenicity island of Yersinia pseudotuberculosis requires the combined actions of its cognate integrase and Hef, a new recombination directionality factor. B Lesic S Bach JM Ghigo U Dobrindt J Hacker E Carniel, Mol Microbiol 2004 52 1337 1348 10.1111/j.1365-2958.2004.04073.x 15165237
-
(2004)
Mol Microbiol
, vol.52
, pp. 1337-1348
-
-
Lesic, B.1
Bach, S.2
Ghigo, J.M.3
Dobrindt, U.4
Hacker, J.5
Carniel, E.6
-
23
-
-
15544371478
-
Rapid method for the construction of Salmonella enterica Serovar Typhimurium vaccine carrier strains
-
10.1128/IAI.73.3.1598-1605.2005. 15731059
-
Rapid method for the construction of Salmonella enterica Serovar Typhimurium vaccine carrier strains. MI Husseiny M Hensel, Infect Immun 2005 73 1598 1605 10.1128/IAI.73.3.1598-1605.2005 15731059
-
(2005)
Infect Immun
, vol.73
, pp. 1598-1605
-
-
Husseiny, M.I.1
Hensel, M.2
-
24
-
-
0142012192
-
Shigella flexneri 2a strain 2457T expresses three members of the H-NS-like protein family: Characterization of the Sfh protein
-
10.1007/s00438-003-0897-0. 12898223
-
Shigella flexneri 2a strain 2457T expresses three members of the H-NS-like protein family: characterization of the Sfh protein. C Beloin P Deighan M Doyle CJ Dorman, Mol Genet Genomics 2003 270 66 77 10.1007/s00438-003-0897-0 12898223
-
(2003)
Mol Genet Genomics
, vol.270
, pp. 66-77
-
-
Beloin, C.1
Deighan, P.2
Doyle, M.3
Dorman, C.J.4
-
25
-
-
0038236453
-
Haemophoremediated signal transduction across the bacterial cell envelope in Serratia marcescens: The inducer and the transported substrate are different molecules
-
10.1046/j.1365-2958.2003.03516.x. 12791131
-
Haemophoremediated signal transduction across the bacterial cell envelope in Serratia marcescens: the inducer and the transported substrate are different molecules. MS Rossi A Paquelin JM Ghigo C Wandersman, Mol Microbiol 2003 48 1467 1480 10.1046/j.1365-2958.2003.03516.x 12791131
-
(2003)
Mol Microbiol
, vol.48
, pp. 1467-1480
-
-
Rossi, M.S.1
Paquelin, A.2
Ghigo, J.M.3
Wandersman, C.4
-
26
-
-
41549105328
-
Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa
-
10.1186/1471-2199-9-20. 18248677
-
Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa. B Lesic LG Rahme, BMC Mol Biol 2008 9 20 10.1186/1471-2199-9-20 18248677
-
(2008)
BMC Mol Biol
, vol.9
, pp. 20
-
-
Lesic, B.1
Rahme, L.G.2
-
27
-
-
1942480531
-
Campellone. Lambda Red-mediated recombinogenic engineering of enterohemorrhagic and enteropathogenic E. coli
-
10.1186/1471-2199-4-11. 14672541
-
Campellone. Lambda Red-mediated recombinogenic engineering of enterohemorrhagic and enteropathogenic E. coli. KC Murphy KG Campellone, BMC Mol Biol 2003 4 11 10.1186/1471-2199-4-11 14672541
-
(2003)
BMC Mol Biol
, vol.4
, pp. 11
-
-
Murphy, K.C.1
Campellone, K.G.2
-
28
-
-
0022461414
-
Selective inhibition of Escherichia coli recBC activities by plasmid-encoded GamS function of phage lambda
-
10.1016/0378-1119(86)90214-3. 2943636
-
Selective inhibition of Escherichia coli recBC activities by plasmid-encoded GamS function of phage lambda. SA Friedman JB Hays, Gene 1986 43 255 263 10.1016/0378-1119(86)90214-3 2943636
-
(1986)
Gene
, vol.43
, pp. 255-263
-
-
Friedman, S.A.1
Hays, J.B.2
-
29
-
-
0024003542
-
Modulation of Escherichia coli RecBCD activity by the bacteriophage lambda Gam and P22 Abc functions
-
2966143
-
Modulation of Escherichia coli RecBCD activity by the bacteriophage lambda Gam and P22 Abc functions. AR Poteete AC Fenton KC Murphy, J Bacteriol 1988 170 2012 2021 2966143
-
(1988)
J Bacteriol
, vol.170
, pp. 2012-2021
-
-
Poteete, A.R.1
Fenton, A.C.2
Murphy, K.C.3
-
30
-
-
0025008355
-
Lambda Red-mediated synthesis of plasmidlinear multimers in Escherichia coli K12
-
10.1007/BF00264459. 2148608
-
Lambda Red-mediated synthesis of plasmidlinear multimers in Escherichia coli K12. Z Silberstein S Maor I Berger A Cohen, Mol Gen Genet 1990 223 496 507 10.1007/BF00264459 2148608
-
(1990)
Mol Gen Genet
, vol.223
, pp. 496-507
-
-
Silberstein, Z.1
Maor, S.2
Berger, I.3
Cohen, A.4
-
31
-
-
58149389286
-
Pseudomonas aeruginosa-Candida albicans interactions: Localization and fungal toxicity of a phenazine derivative
-
10.1128/AEM.01037-08. 19011064
-
Pseudomonas aeruginosa-Candida albicans interactions: localization and fungal toxicity of a phenazine derivative. J Gibson A Sood DA Hogan, Appl Environ Microbiol 2009 75 504 513 10.1128/AEM.01037-08 19011064
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 504-513
-
-
Gibson, J.1
Sood, A.2
Hogan, D.A.3
-
32
-
-
0042510716
-
Phenazine-1-carboxylic acid, a secondary metabolite of Pseudomonas aeruginosa, alters expression of immunomodulatory proteins by human airway epithelial cells
-
12765878
-
Phenazine-1-carboxylic acid, a secondary metabolite of Pseudomonas aeruginosa, alters expression of immunomodulatory proteins by human airway epithelial cells. GM Denning SS Iyer KJ Reszka Y O'Malley GT Rasmussen BE Britigan, Am J Physiol Lung Cell Mol Physiol 2003 285 584 592 12765878
-
(2003)
Am J Physiol Lung Cell Mol Physiol
, vol.285
, pp. 12584-592
-
-
Denning, G.M.1
Iyer, S.S.2
Reszka, K.J.3
O'Malley, Y.4
Rasmussen, G.T.5
Britigan, B.E.6
-
33
-
-
0035685204
-
Functional analysis of genes for biosynthesis of pyocyanin and phenazine-1-carboxamide from Pseudomonas aeruginosa PAO1
-
10.1128/JB.183.21.6454-6465.2001. 11591691
-
Functional analysis of genes for biosynthesis of pyocyanin and phenazine-1-carboxamide from Pseudomonas aeruginosa PAO1. DV Mavrodi RF Bonsall SM Delaney MJ Soule G Phillips LS Thomashow, J Bacteriol 2001 183 6454 6465 10.1128/JB.183.21.6454-6465.2001 11591691
-
(2001)
J Bacteriol
, vol.183
, pp. 6454-6465
-
-
Mavrodi, D.V.1
Bonsall, R.F.2
Delaney, S.M.3
Soule, M.J.4
Phillips, G.5
Thomashow, L.S.6
-
34
-
-
0025117531
-
Identification and characterization of genes for a second anthranilate synthase in Pseudomonas aeruginosa: Interchangeability of the two anthranilate synthases and evolutionary implications
-
2153661
-
Identification and characterization of genes for a second anthranilate synthase in Pseudomonas aeruginosa: interchangeability of the two anthranilate synthases and evolutionary implications. DW Essar L Eberly A Hadero IP Crawford, J Bacteriol 1990 172 884 900 2153661
-
(1990)
J Bacteriol
, vol.172
, pp. 884-900
-
-
Essar, D.W.1
Eberly, L.2
Hadero, A.3
Crawford, I.P.4
|