-
1
-
-
79957884078
-
LSD1 regulates the balance between self-renewal and differentiation in human embryonic stem cells
-
PID: 21602794, COI: 1:CAS:528:DC%2BC3MXmvVarsrY%3D
-
Adamo A, Sesé B, Boue S, Castaño J, Paramonov I, Barrero M J, Izpisua Belmonte J C (2011). LSD1 regulates the balance between self-renewal and differentiation in human embryonic stem cells. Nat Cell Biol, 13(6): 652–659
-
(2011)
Nat Cell Biol
, vol.13
, Issue.6
, pp. 652-659
-
-
Adamo, A.1
Sesé, B.2
Boue, S.3
Castaño, J.4
Paramonov, I.5
Barrero, M.J.6
Izpisua Belmonte, J.C.7
-
2
-
-
79954506151
-
SON controls cell-cycle progression by coordinated regulation of RNA splicing
-
PID: 21504830, COI: 1:CAS:528:DC%2BC3MXltFehurc%3D
-
Ahn E Y, DeKelver R C, Lo M C, Nguyen T A, Matsuura S, Boyapati A, Pandit S, Fu X D, Zhang D E (2011). SON controls cell-cycle progression by coordinated regulation of RNA splicing. Mol Cell, 42(2): 185–198
-
(2011)
Mol Cell
, vol.42
, Issue.2
, pp. 185-198
-
-
Ahn, E.Y.1
DeKelver, R.C.2
Lo, M.C.3
Nguyen, T.A.4
Matsuura, S.5
Boyapati, A.6
Pandit, S.7
Fu, X.D.8
Zhang, D.E.9
-
3
-
-
0025183708
-
Basic local alignment search tool
-
PID: 2231712, COI: 1:CAS:528:DyaK3MXitVGmsA%3D%3D
-
Altschul S F, Gish W, Miller W, Myers E W, Lipman D J (1990). Basic local alignment search tool. J Mol Biol, 215(3): 403–410
-
(1990)
J Mol Biol
, vol.215
, Issue.3
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
4
-
-
0034636984
-
NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal
-
COI: 1:CAS:528:DC%2BD3cXltlCjsb8%3D
-
Amarasinghe G K, De Guzman R N, Turner R B, Chancellor K J, Wu Z R, Summers M F (2000). NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition. J Mol Biol, 301(2): 491–511
-
(2000)
Implications for genome recognition. J Mol Biol
, vol.301
, Issue.2
, pp. 491-511
-
-
Amarasinghe, G.K.1
De Guzman, R.N.2
Turner, R.B.3
Chancellor, K.J.4
Wu, Z.R.5
Summers, M.F.6
-
5
-
-
79954414897
-
Wdr5 mediates self-renewal and reprogramming via the embryonic stemcell core transcriptional network
-
PID: 21477851, COI: 1:CAS:528:DC%2BC3MXkvVGlsb8%3D
-
Ang Y S, Tsai S Y, Lee D F, Monk J, Su J, Ratnakumar K, Ding J, Ge Y, Darr H, Chang B, Wang J, Rendl M, Bernstein E, Schaniel C, Lemischka I R (2011). Wdr5 mediates self-renewal and reprogramming via the embryonic stemcell core transcriptional network. Cell, 145(2): 183–197
-
(2011)
Cell
, vol.145
, Issue.2
, pp. 183-197
-
-
Ang, Y.S.1
Tsai, S.Y.2
Lee, D.F.3
Monk, J.4
Su, J.5
Ratnakumar, K.6
Ding, J.7
Ge, Y.8
Darr, H.9
Chang, B.10
Wang, J.11
Rendl, M.12
Bernstein, E.13
Schaniel, C.14
Lemischka, I.R.15
-
6
-
-
84860268701
-
The RNA-binding landscapes of two SR proteins reveal unique functions and binding to diverse RNA classes
-
PID: 22436691
-
Änkö M L, Müller-McNicoll M, Brandl H, Curk T, Gorup C, Henry I, Ule J, Neugebauer K M (2012). The RNA-binding landscapes of two SR proteins reveal unique functions and binding to diverse RNA classes. Genome Biol, 13(3): R17
-
(2012)
Genome Biol
, vol.13
, Issue.3
, pp. R17
-
-
Änkö, M.L.1
Müller-McNicoll, M.2
Brandl, H.3
Curk, T.4
Gorup, C.5
Henry, I.6
Ule, J.7
Neugebauer, K.M.8
-
7
-
-
79953881831
-
Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency
-
PID: 21474102, COI: 1:CAS:528:DC%2BC3MXksFGns74%3D
-
Anokye-Danso F, Trivedi C M, Juhr D, Gupta M, Cui Z, Tian Y, Zhang Y, Yang W, Gruber P J, Epstein J A, Morrisey E E (2011). Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency. Cell Stem Cell, 8(4): 376–388
-
(2011)
Cell Stem Cell
, vol.8
, Issue.4
, pp. 376-388
-
-
Anokye-Danso, F.1
Trivedi, C.M.2
Juhr, D.3
Gupta, M.4
Cui, Z.5
Tian, Y.6
Zhang, Y.7
Yang, W.8
Gruber, P.J.9
Epstein, J.A.10
Morrisey, E.E.11
-
8
-
-
84886859638
-
Chromatin dynamics during cellular reprogramming
-
PID: 24153299, COI: 1:CAS:528:DC%2BC3sXhs1KrtbnK
-
Apostolou E, Hochedlinger K (2013). Chromatin dynamics during cellular reprogramming. Nature, 502(7472): 462–471
-
(2013)
Nature
, vol.502
, Issue.7472
, pp. 462-471
-
-
Apostolou, E.1
Hochedlinger, K.2
-
9
-
-
58049200457
-
OCT4 spliced variants are differentially expressed in human pluripotent and nonpluripotent cells
-
PID: 18787205, COI: 1:CAS:528:DC%2BD1MXhtFSkt78%3D
-
Atlasi Y, Mowla S J, Ziaee S A, Gokhale P J, Andrews P W (2008). OCT4 spliced variants are differentially expressed in human pluripotent and nonpluripotent cells. Stem Cells, 26(12): 3068–3074
-
(2008)
Stem Cells
, vol.26
, Issue.12
, pp. 3068-3074
-
-
Atlasi, Y.1
Mowla, S.J.2
Ziaee, S.A.3
Gokhale, P.J.4
Andrews, P.W.5
-
10
-
-
79956306617
-
Regulation of X-chromosome inactivation by the X-inactivation centre
-
PID: 21587299, COI: 1:CAS:528:DC%2BC3MXmtFymsL8%3D
-
Augui S, Nora E P, Heard E (2011). Regulation of X-chromosome inactivation by the X-inactivation centre. Nat Rev Genet, 12(6): 429–442
-
(2011)
Nat Rev Genet
, vol.12
, Issue.6
, pp. 429-442
-
-
Augui, S.1
Nora, E.P.2
Heard, E.3
-
11
-
-
84861997955
-
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts
-
PID: 22681889, COI: 1:CAS:528:DC%2BC38XosVejur4%3D
-
Baltz A G, Munschauer M, Schwanhäusser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M (2012). The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol Cell, 46(5): 674–690
-
(2012)
Mol Cell
, vol.46
, Issue.5
, pp. 674-690
-
-
Baltz, A.G.1
Munschauer, M.2
Schwanhäusser, B.3
Vasile, A.4
Murakawa, Y.5
Schueler, M.6
Youngs, N.7
Penfold-Brown, D.8
Drew, K.9
Milek, M.10
Wyler, E.11
Bonneau, R.12
Selbach, M.13
Dieterich, C.14
Landthaler, M.15
-
12
-
-
77950357078
-
LIN28 alters cell fate succession and acts independently of the let-7 microRNA during neurogliogenesis in vitro
-
PID: 20179095, COI: 1:CAS:528:DC%2BC3cXlt1KjsL4%3D
-
Balzer E, Heine C, Jiang Q, Lee V M, Moss E G (2010). LIN28 alters cell fate succession and acts independently of the let-7 microRNA during neurogliogenesis in vitro. Development, 137(6): 891–900
-
(2010)
Development
, vol.137
, Issue.6
, pp. 891-900
-
-
Balzer, E.1
Heine, C.2
Jiang, Q.3
Lee, V.M.4
Moss, E.G.5
-
13
-
-
58249088751
-
MicroRNAs: target recognition and regulatory functions
-
PID: 19167326, COI: 1:CAS:528:DC%2BD1MXhs1Kiuro%3D
-
Bartel D P (2009). MicroRNAs: target recognition and regulatory functions. Cell, 136(2): 215–233
-
(2009)
Cell
, vol.136
, Issue.2
, pp. 215-233
-
-
Bartel, D.P.1
-
14
-
-
33846505055
-
A nucleo-cytoplasmic SR protein functions in viral IRES-mediated translation initiation
-
PID: 17183366, COI: 1:CAS:528:DC%2BD2sXotFKhuw%3D%3D
-
Bedard K M, Daijogo S, Semler B L (2007). A nucleo-cytoplasmic SR protein functions in viral IRES-mediated translation initiation. EMBO J, 26(2): 459–467
-
(2007)
EMBO J
, vol.26
, Issue.2
, pp. 459-467
-
-
Bedard, K.M.1
Daijogo, S.2
Semler, B.L.3
-
15
-
-
0242266620
-
Dicer is essential for mouse development
-
PID: 14528307, COI: 1:CAS:528:DC%2BD3sXosFWrtrs%3D
-
Bernstein E, Kim S Y, Carmell M A, Murchison E P, Alcorn H, Li M Z, Mills A A, Elledge S J, Anderson K V, Hannon G J (2003). Dicer is essential for mouse development. Nat Genet, 35(3): 215–217
-
(2003)
Nat Genet
, vol.35
, Issue.3
, pp. 215-217
-
-
Bernstein, E.1
Kim, S.Y.2
Carmell, M.A.3
Murchison, E.P.4
Alcorn, H.5
Li, M.Z.6
Mills, A.A.7
Elledge, S.J.8
Anderson, K.V.9
Hannon, G.J.10
-
16
-
-
69949132008
-
Paraspeckles: nuclear bodies built on long noncoding RNA
-
PID: 19720872, COI: 1:CAS:528:DC%2BD1MXhtFehsLnL
-
Bond C S, Fox A H (2009). Paraspeckles: nuclear bodies built on long noncoding RNA. J Cell Biol, 186(5): 637–644
-
(2009)
J Cell Biol
, vol.186
, Issue.5
, pp. 637-644
-
-
Bond, C.S.1
Fox, A.H.2
-
17
-
-
0028077574
-
Isolation and culture of inner cell mass cells from human blastocysts
-
PID: 7868682, COI: 1:STN:280:DyaK2M7ntlWrug%3D%3D
-
Bongso A, Fong C Y, Ng S C, Ratnam S (1994). Isolation and culture of inner cell mass cells from human blastocysts. Hum Reprod, 9(11): 2110–2117
-
(1994)
Hum Reprod
, vol.9
, Issue.11
, pp. 2110-2117
-
-
Bongso, A.1
Fong, C.Y.2
Ng, S.C.3
Ratnam, S.4
-
18
-
-
16544392649
-
Novel mutations in the gene SALL4 provide further evidence for acro-renal-ocular and Okihiro syndromes being allelic entities, and extend the phenotypic spectrum
-
PID: 15286162, COI: 1:STN:280:DC%2BD2czot1yrsg%3D%3D
-
Borozdin W, Wright M J, Hennekam R C, Hannibal M C, Crow Y J, Neumann T E, Kohlhase J (2004). Novel mutations in the gene SALL4 provide further evidence for acro-renal-ocular and Okihiro syndromes being allelic entities, and extend the phenotypic spectrum. J Med Genet, 41(8): e102
-
(2004)
J Med Genet
, vol.41
, Issue.8
, pp. e102
-
-
Borozdin, W.1
Wright, M.J.2
Hennekam, R.C.3
Hannibal, M.C.4
Crow, Y.J.5
Neumann, T.E.6
Kohlhase, J.7
-
19
-
-
0031583913
-
Transcription of unr (upstream of N-ras) down-modulates N-ras expression in vivo
-
PID: 9450542, COI: 1:CAS:528:DyaK2sXotVyjtrs%3D
-
Boussadia O, Amiot F, Cases S, Triqueneaux G, Jacquemin-Sablon H, Dautry F (1997). Transcription of unr (upstream of N-ras) down-modulates N-ras expression in vivo. FEBS Lett, 420(1): 20–24
-
(1997)
FEBS Lett
, vol.420
, Issue.1
, pp. 20-24
-
-
Boussadia, O.1
Amiot, F.2
Cases, S.3
Triqueneaux, G.4
Jacquemin-Sablon, H.5
Dautry, F.6
-
20
-
-
84863230221
-
Alternative polyadenylation mediates microRNA regulation of muscle stem cell function
-
PID: 22385659, COI: 1:CAS:528:DC%2BC38XjtlOmtbk%3D
-
Boutet S C, Cheung T H, Quach N L, Liu L, Prescott S L, Edalati A, Iori K, Rando T A (2012). Alternative polyadenylation mediates microRNA regulation of muscle stem cell function. Cell Stem Cell, 10(3): 327–336
-
(2012)
Cell Stem Cell
, vol.10
, Issue.3
, pp. 327-336
-
-
Boutet, S.C.1
Cheung, T.H.2
Quach, N.L.3
Liu, L.4
Prescott, S.L.5
Edalati, A.6
Iori, K.7
Rando, T.A.8
-
21
-
-
33748429062
-
Molecular control of pluripotency
-
PID: 16920351, COI: 1:CAS:528:DC%2BD28Xps1Ogurg%3D
-
Boyer L A, Mathur D, Jaenisch R (2006). Molecular control of pluripotency. Curr Opin Genet Dev, 16(5): 455–462
-
(2006)
Curr Opin Genet Dev
, vol.16
, Issue.5
, pp. 455-462
-
-
Boyer, L.A.1
Mathur, D.2
Jaenisch, R.3
-
22
-
-
84896701604
-
The RNA-binding protein Rbfox2: an essential regulator of EMT-driven alternative splicing and a mediator of cellular invasion
-
PID: 23435423, COI: 1:CAS:528:DC%2BC3sXivF2jurY%3D
-
Braeutigam C, Rago L, Rolke A, Waldmeier L, Christofori G, Winter J (2014). The RNA-binding protein Rbfox2: an essential regulator of EMT-driven alternative splicing and a mediator of cellular invasion. Oncogene, 33(9): 1082–1092
-
(2014)
Oncogene
, vol.33
, Issue.9
, pp. 1082-1092
-
-
Braeutigam, C.1
Rago, L.2
Rolke, A.3
Waldmeier, L.4
Christofori, G.5
Winter, J.6
-
23
-
-
0024274359
-
Intra-RNA and RNA-protein cross-linking techniques in Escherichia coli ribosomes
-
PID: 3071669, COI: 1:CAS:528:DyaL1MXitVyrtrc%3D
-
Brimacombe R, Stiege W, Kyriatsoulis A, Maly P (1988). Intra-RNA and RNA-protein cross-linking techniques in Escherichia coli ribosomes. Methods Enzymol, 164: 287–309
-
(1988)
Methods Enzymol
, vol.164
, pp. 287-309
-
-
Brimacombe, R.1
Stiege, W.2
Kyriatsoulis, A.3
Maly, P.4
-
24
-
-
84875418596
-
Noncoding RNA and Polycomb recruitment
-
PID: 23431328, COI: 1:CAS:528:DC%2BC3sXltVyqtbs%3D
-
Brockdorff N (2013). Noncoding RNA and Polycomb recruitment. RNA, 19(4): 429–442
-
(2013)
RNA
, vol.19
, Issue.4
, pp. 429-442
-
-
Brockdorff, N.1
-
25
-
-
59649124310
-
Nonsense-mediated mRNA decay (NMD) mechanisms
-
PID: 19190664, COI: 1:CAS:528:DC%2BD1MXhtlyjtL4%3D
-
Brogna S, Wen J (2009). Nonsense-mediated mRNA decay (NMD) mechanisms. Nat Struct Mol Biol, 16(2): 107–113
-
(2009)
Nat Struct Mol Biol
, vol.16
, Issue.2
, pp. 107-113
-
-
Brogna, S.1
Wen, J.2
-
26
-
-
84899748605
-
A pancancer analysis of transcriptome changes associated with somatic mutations in U2AF1 reveals commonly altered splicing events
-
PID: 24498085
-
Brooks A N, Choi P S, deWaal L, Sharifnia T, Imielinski M, Saksena G, Pedamallu C S, Sivachenko A, Rosenberg M, Chmielecki J, Lawrence M S, DeLuca D S, Getz G, Meyerson M (2014). A pancancer analysis of transcriptome changes associated with somatic mutations in U2AF1 reveals commonly altered splicing events. PLoS ONE, 9(1): e87361
-
(2014)
PLoS ONE
, vol.9
, Issue.1
, pp. e87361
-
-
Brooks, A.N.1
Choi, P.S.2
deWaal, L.3
Sharifnia, T.4
Imielinski, M.5
Saksena, G.6
Pedamallu, C.S.7
Sivachenko, A.8
Rosenberg, M.9
Chmielecki, J.10
Lawrence, M.S.11
DeLuca, D.S.12
Getz, G.13
Meyerson, M.14
-
27
-
-
84877978530
-
Mechanisms and models of somatic cell reprogramming
-
PID: 23681063, COI: 1:CAS:528:DC%2BC3sXnslahsbk%3D
-
Buganim Y, Faddah D A, Jaenisch R (2013). Mechanisms and models of somatic cell reprogramming. Nat Rev Genet, 14(6): 427–439
-
(2013)
Nat Rev Genet
, vol.14
, Issue.6
, pp. 427-439
-
-
Buganim, Y.1
Faddah, D.A.2
Jaenisch, R.3
-
28
-
-
0036830642
-
Role of histone H3 lysine 27 methylation in Polycomb-group silencing
-
PID: 12351676, COI: 1:CAS:528:DC%2BD38Xot12rs7g%3D
-
Cao R, Wang L, Wang H, Xia L, Erdjument-Bromage H, Tempst P, Jones R S, Zhang Y (2002). Role of histone H3 lysine 27 methylation in Polycomb-group silencing. Science, 298(5595): 1039–1043
-
(2002)
Science
, vol.298
, Issue.5595
, pp. 1039-1043
-
-
Cao, R.1
Wang, L.2
Wang, H.3
Xia, L.4
Erdjument-Bromage, H.5
Tempst, P.6
Jones, R.S.7
Zhang, Y.8
-
29
-
-
33749125424
-
The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation
-
PID: 17011493, COI: 1:CAS:528:DC%2BD28XhtFWqtLzF
-
Caretti G, Schiltz R L, Dilworth F J, Di Padova M, Zhao P, Ogryzko V, Fuller-Pace F V, Hoffman E P, Tapscott S J, Sartorelli V (2006). The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation. Dev Cell, 11: 547–560
-
(2006)
Dev Cell
, vol.11
, pp. 547-560
-
-
Caretti, G.1
Schiltz, R.L.2
Dilworth, F.J.3
Di Padova, M.4
Zhao, P.5
Ogryzko, V.6
Fuller-Pace, F.V.7
Hoffman, E.P.8
Tapscott, S.J.9
Sartorelli, V.10
-
30
-
-
84861969926
-
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins
-
PID: 22658674, COI: 1:CAS:528:DC%2BC38XotVWhtrk%3D
-
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann B M, Strein C, Davey N E, Humphreys D T, Preiss T, Steinmetz L M, Krijgsveld J, Hentze M W (2012). Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell, 149(6): 1393–1406
-
(2012)
Cell
, vol.149
, Issue.6
, pp. 1393-1406
-
-
Castello, A.1
Fischer, B.2
Eichelbaum, K.3
Horos, R.4
Beckmann, B.M.5
Strein, C.6
Davey, N.E.7
Humphreys, D.T.8
Preiss, T.9
Steinmetz, L.M.10
Krijgsveld, J.11
Hentze, M.W.12
-
31
-
-
84893857700
-
Spatial separation of Xist RNA and polycomb proteins revealed by superresolution microscopy
-
PID: 24469834, COI: 1:CAS:528:DC%2BC2cXisFOlsrs%3D
-
Cerase A, Smeets D, Tang Y A, Gdula M, Kraus F, Spivakov M, Moindrot B, Leleu M, Tattermusch A, Demmerle J, Nesterova T B, Green C, Otte A P, Schermelleh L, Brockdorff N (2014). Spatial separation of Xist RNA and polycomb proteins revealed by superresolution microscopy. Proc Natl Acad Sci USA, 111(6): 2235–2240
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, Issue.6
, pp. 2235-2240
-
-
Cerase, A.1
Smeets, D.2
Tang, Y.A.3
Gdula, M.4
Kraus, F.5
Spivakov, M.6
Moindrot, B.7
Leleu, M.8
Tattermusch, A.9
Demmerle, J.10
Nesterova, T.B.11
Green, C.12
Otte, A.P.13
Schermelleh, L.14
Brockdorff, N.15
-
32
-
-
48649091905
-
Polycomb repressive complex 2 is dispensable for maintenance of embryonic stem cell pluripotency
-
PID: 18403752, COI: 1:CAS:528:DC%2BD1cXotFGhtb8%3D
-
Chamberlain S J, Yee D, Magnuson T (2008). Polycomb repressive complex 2 is dispensable for maintenance of embryonic stem cell pluripotency. Stem Cells, 26(6): 1496–1505
-
(2008)
Stem Cells
, vol.26
, Issue.6
, pp. 1496-1505
-
-
Chamberlain, S.J.1
Yee, D.2
Magnuson, T.3
-
33
-
-
37549002155
-
Nanog safeguards pluripotency and mediates germline development
-
PID: 18097409, COI: 1:CAS:528:DC%2BD2sXhsVGjsL7K
-
Chambers I, Silva J, Colby D, Nichols J, Nijmeijer B, Robertson M, Vrana J, Jones K, Grotewold L, Smith A (2007). Nanog safeguards pluripotency and mediates germline development. Nature, 450(7173): 1230–1234
-
(2007)
Nature
, vol.450
, Issue.7173
, pp. 1230-1234
-
-
Chambers, I.1
Silva, J.2
Colby, D.3
Nichols, J.4
Nijmeijer, B.5
Robertson, M.6
Vrana, J.7
Jones, K.8
Grotewold, L.9
Smith, A.10
-
34
-
-
69649084228
-
The transcriptional foundation of pluripotency
-
PID: 19542351, COI: 1:CAS:528:DC%2BD1MXpvFGgtLg%3D
-
Chambers I, Tomlinson S R (2009). The transcriptional foundation of pluripotency. Development, 136(14): 2311–2322
-
(2009)
Development
, vol.136
, Issue.14
, pp. 2311-2322
-
-
Chambers, I.1
Tomlinson, S.R.2
-
35
-
-
18444380595
-
The double-stranded RNA-binding motif, a versatile macromolecular docking platform
-
PID: 15853796, COI: 1:CAS:528:DC%2BD2MXkt1Wmtr0%3D
-
Chang K Y, Ramos A (2005). The double-stranded RNA-binding motif, a versatile macromolecular docking platform. FEBS J, 272(9): 2109–2117
-
(2005)
FEBS J
, vol.272
, Issue.9
, pp. 2109-2117
-
-
Chang, K.Y.1
Ramos, A.2
-
36
-
-
68949212914
-
Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA
-
PID: 19716791, COI: 1:CAS:528:DC%2BD1MXhsVChsrvJ
-
Chen L L, Carmichael G G (2009). Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA. Mol Cell, 35(4): 467–478
-
(2009)
Mol Cell
, vol.35
, Issue.4
, pp. 467-478
-
-
Chen, L.L.1
Carmichael, G.G.2
-
37
-
-
79961235977
-
In silico tandem affinity purification refines an Oct4 interaction list
-
PID: 21569470, COI: 1:CAS:528:DC%2BC3MXms1Wjurc%3D
-
Cheong C Y, Lon Ng P M, Ponnampalam R, Tsai H H, Bourque G, Lufkin T (2011). In silico tandem affinity purification refines an Oct4 interaction list. Stem Cell Res Ther, 2(3): 26
-
(2011)
Stem Cell Res Ther
, vol.2
, Issue.3
, pp. 26
-
-
Cheong, C.Y.1
Lon Ng, P.M.2
Ponnampalam, R.3
Tsai, H.H.4
Bourque, G.5
Lufkin, T.6
-
38
-
-
67749132423
-
Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
-
PID: 19536157, COI: 1:CAS:528:DC%2BD1MXnsVagtr4%3D
-
Chi S W, Zang J B, Mele A, Darnell R B (2009). Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. Nature, 460(7254): 479–486
-
(2009)
Nature
, vol.460
, Issue.7254
, pp. 479-486
-
-
Chi, S.W.1
Zang, J.B.2
Mele, A.3
Darnell, R.B.4
-
39
-
-
78149465975
-
A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity
-
PID: 20953172, COI: 1:CAS:528:DC%2BC3cXhtlSgtbfP
-
Chia N Y, Chan Y S, Feng B, Lu X, Orlov Y L, Moreau D, Kumar P, Yang L, Jiang J, Lau M S, Huss M, Soh B S, Kraus P, Li P, Lufkin T, Lim B, Clarke N D, Bard F, Ng H H (2010). A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity. Nature, 468(7321): 316–320
-
(2010)
Nature
, vol.468
, Issue.7321
, pp. 316-320
-
-
Chia, N.Y.1
Chan, Y.S.2
Feng, B.3
Lu, X.4
Orlov, Y.L.5
Moreau, D.6
Kumar, P.7
Yang, L.8
Jiang, J.9
Lau, M.S.10
Huss, M.11
Soh, B.S.12
Kraus, P.13
Li, P.14
Lufkin, T.15
Lim, B.16
Clarke, N.D.17
Bard, F.18
Ng, H.H.19
-
40
-
-
84869086143
-
LIN28A is a suppressor of ER-associated translation in embryonic stem cells
-
PID: 23102813, COI: 1:CAS:528:DC%2BC38XhsF2hs7fE
-
Cho J, Chang H, Kwon S C, Kim B, Kim Y, Choe J, Ha M, Kim Y K, Kim V N (2012). LIN28A is a suppressor of ER-associated translation in embryonic stem cells. Cell, 151(4): 765–777
-
(2012)
Cell
, vol.151
, Issue.4
, pp. 765-777
-
-
Cho, J.1
Chang, H.2
Kwon, S.C.3
Kim, B.4
Kim, Y.5
Choe, J.6
Ha, M.7
Kim, Y.K.8
Kim, V.N.9
-
41
-
-
79953700592
-
Identification and characterization of adenovirus early region 1B-associated protein 5 as a surface marker on undifferentiated human embryonic stem cells
-
PID: 21083500, COI: 1:CAS:528:DC%2BC3MXktVOnsLw%3D
-
Choi H S, Kim WT, Kim H, Kim J J, Ko J Y, Lee SW, Jang Y J, Kim S J, Lee M J, Jung H S, Kzhyshkowska J, Um S J, Lee M Y, Lee S H, Kim C H, Ryu C J (2011). Identification and characterization of adenovirus early region 1B-associated protein 5 as a surface marker on undifferentiated human embryonic stem cells. Stem Cells Dev, 20(4): 609–620
-
(2011)
Stem Cells Dev
, vol.20
, Issue.4
, pp. 609-620
-
-
Choi, H.S.1
Kim, W.T.2
Kim, H.3
Kim, J.J.4
Ko, J.Y.5
Lee, S.W.6
Jang, Y.J.7
Kim, S.J.8
Lee, M.J.9
Jung, H.S.10
Kzhyshkowska, J.11
Um, S.J.12
Lee, M.Y.13
Lee, S.H.14
Kim, C.H.15
Ryu, C.J.16
-
42
-
-
62549117314
-
An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles
-
PID: 19217333, COI: 1:CAS:528:DC%2BD1MXltFSmsL4%3D
-
Clemson C M, Hutchinson J N, Sara S A, Ensminger A W, Fox A H, Chess A, Lawrence J B (2009). An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles. Mol Cell, 33(6): 717–726
-
(2009)
Mol Cell
, vol.33
, Issue.6
, pp. 717-726
-
-
Clemson, C.M.1
Hutchinson, J.N.2
Sara, S.A.3
Ensminger, A.W.4
Fox, A.H.5
Chess, A.6
Lawrence, J.B.7
-
43
-
-
33344473656
-
The DEAD-box protein family of RNA helicases
-
PID: 16337753, COI: 1:CAS:528:DC%2BD28XhsFGjtL8%3D
-
Cordin O, Banroques J, Tanner N K, Linder P (2006). The DEAD-box protein family of RNA helicases. Gene, 367: 17–37
-
(2006)
Gene
, vol.367
, pp. 17-37
-
-
Cordin, O.1
Banroques, J.2
Tanner, N.K.3
Linder, P.4
-
44
-
-
84892866184
-
Jarid2 Is Implicated in the Initial Xist-Induced Targeting of PRC2 to the Inactive X Chromosome
-
PID: 24462204
-
da Rocha S T, Boeva V, Escamilla-Del-Arenal M, Ancelin K, Granier C, Matias N R, Sanulli S, Chow J, Schulz E, Picard C, Kaneko S, Helin K, Reinberg D, Stewart A F, Wutz A, Margueron R, Heard E (2014). Jarid2 Is Implicated in the Initial Xist-Induced Targeting of PRC2 to the Inactive X Chromosome. Mol Cell, 53(2): 301–316
-
(2014)
Mol Cell
, vol.53
, Issue.2
, pp. 301-316
-
-
da Rocha, S.T.1
Boeva, V.2
Escamilla-Del-Arenal, M.3
Ancelin, K.4
Granier, C.5
Matias, N.R.6
Sanulli, S.7
Chow, J.8
Schulz, E.9
Picard, C.10
Kaneko, S.11
Helin, K.12
Reinberg, D.13
Stewart, A.F.14
Wutz, A.15
Margueron, R.16
Heard, E.17
-
45
-
-
84899905149
-
Primordial Dwarfism Gene Maintains Lin28 Expression to Safeguard Embryonic Stem Cells from Premature Differentiation
-
PID: 24768001, COI: 1:CAS:528:DC%2BC2cXntFCqtL0%3D
-
Dai Q, Luan G, Deng L, Lei T, Kang H, Song X, Zhang Y, Xiao Z X, Li Q (2014). Primordial Dwarfism Gene Maintains Lin28 Expression to Safeguard Embryonic Stem Cells from Premature Differentiation. Cell Rep, 7(3): 735–746
-
(2014)
Cell Rep
, vol.7
, Issue.3
, pp. 735-746
-
-
Dai, Q.1
Luan, G.2
Deng, L.3
Lei, T.4
Kang, H.5
Song, X.6
Zhang, Y.7
Xiao, Z.X.8
Li, Q.9
-
46
-
-
77953928753
-
HITS-CLIP: panoramic views of protein-RNA regulation in living cells
-
PID: 21935890, COI: 1:CAS:528:DC%2BC3cXhsFOiur7F
-
Darnell R B (2010). HITS-CLIP: panoramic views of protein-RNA regulation in living cells. Wiley Interdiscip Rev RNA, 1(2): 266–286
-
(2010)
Wiley Interdiscip Rev RNA
, vol.1
, Issue.2
, pp. 266-286
-
-
Darnell, R.B.1
-
47
-
-
82755162926
-
Alternative splicing produces Nanog protein variants with different capacities for self-renewal and pluripotency in embryonic stem cells
-
PID: 21969378, COI: 1:CAS:528:DC%2BC3MXhsFKjs7zN
-
Das S, Jena S, Levasseur D N (2011). Alternative splicing produces Nanog protein variants with different capacities for self-renewal and pluripotency in embryonic stem cells. J Biol Chem, 286(49): 42690–42703
-
(2011)
J Biol Chem
, vol.286
, Issue.49
, pp. 42690-42703
-
-
Das, S.1
Jena, S.2
Levasseur, D.N.3
-
48
-
-
84887419464
-
Promiscuous RNA binding by Polycomb repressive complex 2
-
PID: 24077223, COI: 1:CAS:528:DC%2BC3sXhsFaksrzM
-
Davidovich C, Zheng L, Goodrich K J, Cech T R (2013). Promiscuous RNA binding by Polycomb repressive complex 2. Nat Struct Mol Biol, 20(11): 1250–1257
-
(2013)
Nat Struct Mol Biol
, vol.20
, Issue.11
, pp. 1250-1257
-
-
Davidovich, C.1
Zheng, L.2
Goodrich, K.J.3
Cech, T.R.4
-
49
-
-
84888057006
-
DNMT1-interacting RNAs block gene-specific DNA methylation
-
PID: 24107992
-
Di Ruscio A, Ebralidze A K, Benoukraf T, Amabile G, Goff L A, Terragni J, Figueroa M E, De Figueiredo Pontes L L, Alberich-Jorda M, Zhang P, Wu M, D’Alò F, Melnick A, Leone G, Ebralidze K K, Pradhan S, Rinn J L, Tenen D G (2013). DNMT1-interacting RNAs block gene-specific DNA methylation. Nature, 503(7476): 371–376
-
(2013)
Nature
, vol.503
, Issue.7476
, pp. 371-376
-
-
Di Ruscio, A.1
Ebralidze, A.K.2
Benoukraf, T.3
Amabile, G.4
Goff, L.A.5
Terragni, J.6
Figueroa, M.E.7
De Figueiredo Pontes, L.L.8
Alberich-Jorda, M.9
Zhang, P.10
Wu, M.11
D’Alò, F.12
Melnick, A.13
Leone, G.14
Ebralidze, K.K.15
Pradhan, S.16
Rinn, J.L.17
Tenen, D.G.18
-
50
-
-
84862628951
-
fus/TLS orchestrates splicing of developmental regulators during gastrulation
-
PID: 22713872, COI: 1:CAS:528:DC%2BC38XhtVegs7zO
-
Dichmann D S, Harland R M (2012). fus/TLS orchestrates splicing of developmental regulators during gastrulation. Genes Dev, 26(12): 1351–1363
-
(2012)
Genes Dev
, vol.26
, Issue.12
, pp. 1351-1363
-
-
Dichmann, D.S.1
Harland, R.M.2
-
51
-
-
65349123354
-
A genome-scale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity
-
PID: 19345177, COI: 1:CAS:528:DC%2BD1MXlvVGjtLg%3D
-
Ding L, Paszkowski-Rogacz M, Nitzsche A, Slabicki M M, Heninger A K, de Vries I, Kittler R, Junqueira M, Shevchenko A, Schulz H, Hubner N, Doss M X, Sachinidis A, Hescheler J, Iacone R, Anastassiadis K, Stewart A F, Pisabarro M T, Caldarelli A, Poser I, Theis M, Buchholz F (2009). A genome-scale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity. Cell Stem Cell, 4(5): 403–415
-
(2009)
Cell Stem Cell
, vol.4
, Issue.5
, pp. 403-415
-
-
Ding, L.1
Paszkowski-Rogacz, M.2
Nitzsche, A.3
Slabicki, M.M.4
Heninger, A.K.5
de Vries, I.6
Kittler, R.7
Junqueira, M.8
Shevchenko, A.9
Schulz, H.10
Hubner, N.11
Doss, M.X.12
Sachinidis, A.13
Hescheler, J.14
Iacone, R.15
Anastassiadis, K.16
Stewart, A.F.17
Pisabarro, M.T.18
Caldarelli, A.19
Poser, I.20
Theis, M.21
Buchholz, F.22
more..
-
52
-
-
50649118350
-
Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation
-
PID: 18562676, COI: 1:CAS:528:DC%2BD1cXhtV2qsr3N
-
Dinger M E, Amaral P P, Mercer T R, Pang K C, Bruce S J, Gardiner B B, Askarian-Amiri M E, Ru K, Soldà G, Simons C, Sunkin S M, Crowe M L, Grimmond S M, Perkins A C, Mattick J S (2008). Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation. Genome Res, 18(9): 1433–1445
-
(2008)
Genome Res
, vol.18
, Issue.9
, pp. 1433-1445
-
-
Dinger, M.E.1
Amaral, P.P.2
Mercer, T.R.3
Pang, K.C.4
Bruce, S.J.5
Gardiner, B.B.6
Askarian-Amiri, M.E.7
Ru, K.8
Soldà, G.9
Simons, C.10
Sunkin, S.M.11
Crowe, M.L.12
Grimmond, S.M.13
Perkins, A.C.14
Mattick, J.S.15
-
53
-
-
84883197339
-
The double-stranded RNA binding domain of human Dicer functions as a nuclear localization signal
-
PID: 23882114, COI: 1:CAS:528:DC%2BC3sXhsVSgtLbN
-
Doyle M, Badertscher L, Jaskiewicz L, Güttinger S, Jurado S, Hugenschmidt T, Kutay U, Filipowicz W (2013). The double-stranded RNA binding domain of human Dicer functions as a nuclear localization signal. RNA, 19(9): 1238–1252
-
(2013)
RNA
, vol.19
, Issue.9
, pp. 1238-1252
-
-
Doyle, M.1
Badertscher, L.2
Jaskiewicz, L.3
Güttinger, S.4
Jurado, S.5
Hugenschmidt, T.6
Kutay, U.7
Filipowicz, W.8
-
54
-
-
0027294031
-
hnRNP proteins and the biogenesis of mRNA
-
PID: 8352591, COI: 1:CAS:528:DyaK3sXlsFartLk%3D
-
Dreyfuss G, Matunis M J, Piñol-Roma S, Burd C G (1993). hnRNP proteins and the biogenesis of mRNA. Annu Rev Biochem, 62(1): 289–321
-
(1993)
Annu Rev Biochem
, vol.62
, Issue.1
, pp. 289-321
-
-
Dreyfuss, G.1
Matunis, M.J.2
Piñol-Roma, S.3
Burd, C.G.4
-
55
-
-
0035917508
-
Structure of Pumilio reveals similarity between RNA and peptide binding motifs
-
PID: 11336677, COI: 1:CAS:528:DC%2BD3MXjtFOktLo%3D
-
Edwards T A, Pyle S E, Wharton R P, Aggarwal A K (2001). Structure of Pumilio reveals similarity between RNA and peptide binding motifs. Cell, 105(2): 281–289
-
(2001)
Cell
, vol.105
, Issue.2
, pp. 281-289
-
-
Edwards, T.A.1
Pyle, S.E.2
Wharton, R.P.3
Aggarwal, A.K.4
-
56
-
-
80053261299
-
The RNA-binding protein Unr prevents mouse embryonic stem cells differentiation toward the primitive endoderm lineage
-
PID: 21954113, COI: 1:CAS:528:DC%2BC3MXhsV2itb7M
-
Elatmani H, Dormoy-Raclet V, Dubus P, Dautry F, Chazaud C, Jacquemin-Sablon H (2011). The RNA-binding protein Unr prevents mouse embryonic stem cells differentiation toward the primitive endoderm lineage. Stem Cells, 29(10): 1504–1516
-
(2011)
Stem Cells
, vol.29
, Issue.10
, pp. 1504-1516
-
-
Elatmani, H.1
Dormoy-Raclet, V.2
Dubus, P.3
Dautry, F.4
Chazaud, C.5
Jacquemin-Sablon, H.6
-
57
-
-
84879408529
-
Alternative cleavage and polyadenylation: extent, regulation and function
-
PID: 23774734, COI: 1:CAS:528:DC%2BC3sXpsFShtrw%3D
-
Elkon R, Ugalde A P, Agami R (2013). Alternative cleavage and polyadenylation: extent, regulation and function. Nat Rev Genet, 14(7): 496–506
-
(2013)
Nat Rev Genet
, vol.14
, Issue.7
, pp. 496-506
-
-
Elkon, R.1
Ugalde, A.P.2
Agami, R.3
-
58
-
-
0019826665
-
Establishment in culture of pluripotential cells from mouse embryos
-
PID: 7242681, COI: 1:STN:280:DyaL3M3itV2qsg%3D%3D
-
Evans M J, Kaufman M H (1981). Establishment in culture of pluripotential cells from mouse embryos. Nature, 292(5819): 154–156
-
(1981)
Nature
, vol.292
, Issue.5819
, pp. 154-156
-
-
Evans, M.J.1
Kaufman, M.H.2
-
59
-
-
84883193285
-
The RNA-binding protein ESRP1 fine-tunes the expression of pluripotency-related factors in mouse embryonic stem cells
-
PID: 24015231, COI: 1:CAS:528:DC%2BC3sXhsVWhtr3N
-
Fagoonee S, Bearzi C, Di Cunto F, Clohessy J G, Rizzi R, Reschke M, Tolosano E, Provero P, Pandolfi P P, Silengo L, Altruda F (2013). The RNA-binding protein ESRP1 fine-tunes the expression of pluripotency-related factors in mouse embryonic stem cells. PLoS ONE, 8(8): e72300
-
(2013)
PLoS ONE
, vol.8
, Issue.8
, pp. e72300
-
-
Fagoonee, S.1
Bearzi, C.2
Di Cunto, F.3
Clohessy, J.G.4
Rizzi, R.5
Reschke, M.6
Tolosano, E.7
Provero, P.8
Pandolfi, P.P.9
Silengo, L.10
Altruda, F.11
-
60
-
-
77955440543
-
Generation of functional hepatocytes from mouse germ line cell-derived pluripotent stem cells in vitro
-
PID: 20331356, COI: 1:CAS:528:DC%2BC3cXhtVejs77L
-
Fagoonee S, Hobbs RM, De Chiara L, Cantarella D, Piro RM, Tolosano E, Medico E, Provero P, Pandolfi P P, Silengo L, Altruda F (2010). Generation of functional hepatocytes from mouse germ line cell-derived pluripotent stem cells in vitro. Stem Cells Dev, 19(8): 1183–1194
-
(2010)
Stem Cells Dev
, vol.19
, Issue.8
, pp. 1183-1194
-
-
Fagoonee, S.1
Hobbs, R.M.2
De Chiara, L.3
Cantarella, D.4
Piro, R.M.5
Tolosano, E.6
Medico, E.7
Provero, P.8
Pandolfi, P.P.9
Silengo, L.10
Altruda, F.11
-
61
-
-
79959377357
-
A universal code for RNA recognition by PUF proteins
-
PID: 21572425, COI: 1:CAS:528:DC%2BC3MXmtV2ht7o%3D
-
Filipovska A, Razif M F, Nygård K K, Rackham O (2011). A universal code for RNA recognition by PUF proteins. Nat Chem Biol, 7(7): 425–427
-
(2011)
Nat Chem Biol
, vol.7
, Issue.7
, pp. 425-427
-
-
Filipovska, A.1
Razif, M.F.2
Nygård, K.K.3
Rackham, O.4
-
62
-
-
57649211993
-
Genome-wide analysis of MEF2 transcriptional program reveals synaptic target genes and neuronal activity-dependent polyadenylation site selection
-
PID: 19109909, COI: 1:CAS:528:DC%2BD1MXlsVGquw%3D%3D
-
Flavell S W, Kim T K, Gray J M, Harmin D A, Hemberg M, Hong E J, Markenscoff-Papadimitriou E, Bear D M, Greenberg M E (2008). Genome-wide analysis of MEF2 transcriptional program reveals synaptic target genes and neuronal activity-dependent polyadenylation site selection. Neuron, 60(6): 1022–1038
-
(2008)
Neuron
, vol.60
, Issue.6
, pp. 1022-1038
-
-
Flavell, S.W.1
Kim, T.K.2
Gray, J.M.3
Harmin, D.A.4
Hemberg, M.5
Hong, E.J.6
Markenscoff-Papadimitriou, E.7
Bear, D.M.8
Greenberg, M.E.9
-
63
-
-
0031732094
-
A computer program for aligning a cDNA sequence with a genomic DNA sequence
-
PID: 9750195, COI: 1:CAS:528:DyaK1cXmsVWnt74%3D
-
Florea L, Hartzell G, Zhang Z, Rubin GM, Miller W (1998). A computer program for aligning a cDNA sequence with a genomic DNA sequence. Genome Res, 8(9): 967–974
-
(1998)
Genome Res
, vol.8
, Issue.9
, pp. 967-974
-
-
Florea, L.1
Hartzell, G.2
Zhang, Z.3
Rubin, G.M.4
Miller, W.5
-
64
-
-
0037039475
-
Paraspeckles: a novel nuclear domain
-
PID: 11790299, COI: 1:CAS:528:DC%2BD38Xpt1aktQ%3D%3D
-
Fox A H, Lam Y W, Leung A K, Lyon C E, Andersen J, Mann M, Lamond A I (2002). Paraspeckles: a novel nuclear domain. Curr Biol, 12(1): 13–25
-
(2002)
Curr Biol
, vol.12
, Issue.1
, pp. 13-25
-
-
Fox, A.H.1
Lam, Y.W.2
Leung, A.K.3
Lyon, C.E.4
Andersen, J.5
Mann, M.6
Lamond, A.I.7
-
66
-
-
80052223272
-
An alternative splicing switch regulates embryonic stem cell pluripotency and reprogramming
-
PID: 21924763, COI: 1:CAS:528:DC%2BC3MXht1GrsLvF
-
Gabut M, Samavarchi-Tehrani P, Wang X, Slobodeniuc V, O’Hanlon D, Sung H K, Alvarez M, Talukder S, Pan Q, Mazzoni E O, Nedelec S, Wichterle H, Woltjen K, Hughes T R, Zandstra P W, Nagy A, Wrana J L, Blencowe B J (2011). An alternative splicing switch regulates embryonic stem cell pluripotency and reprogramming. Cell, 147(1): 132–146
-
(2011)
Cell
, vol.147
, Issue.1
, pp. 132-146
-
-
Gabut, M.1
Samavarchi-Tehrani, P.2
Wang, X.3
Slobodeniuc, V.4
O’Hanlon, D.5
Sung, H.K.6
Alvarez, M.7
Talukder, S.8
Pan, Q.9
Mazzoni, E.O.10
Nedelec, S.11
Wichterle, H.12
Woltjen, K.13
Hughes, T.R.14
Zandstra, P.W.15
Nagy, A.16
Wrana, J.L.17
Blencowe, B.J.18
-
67
-
-
52349122355
-
Comparative analysis of mRNA targets for human PUFfamily proteins suggests extensive interaction with the miRNA regulatory system
-
PID: 18776931
-
Galgano A, Forrer M, Jaskiewicz L, Kanitz A, Zavolan M, Gerber A P (2008). Comparative analysis of mRNA targets for human PUFfamily proteins suggests extensive interaction with the miRNA regulatory system. PLoS ONE, 3(9): e3164
-
(2008)
PLoS ONE
, vol.3
, Issue.9
, pp. e3164
-
-
Galgano, A.1
Forrer, M.2
Jaskiewicz, L.3
Kanitz, A.4
Zavolan, M.5
Gerber, A.P.6
-
68
-
-
34347225099
-
The dsRNA protein kinase PKR: virus and cell control
-
PID: 17451862
-
García M A, Meurs E F, Esteban M (2007). The dsRNA protein kinase PKR: virus and cell control. Biochimie, 89(6-7): 799–811
-
(2007)
Biochimie
, vol.89
, Issue.6-7
, pp. 799-811
-
-
García, M.A.1
Meurs, E.F.2
Esteban, M.3
-
69
-
-
33645217973
-
Genome-wide identification of mRNAs associated with the translational regulator PUMILIO in Drosophila melanogaster
-
PID: 16537387, COI: 1:CAS:528:DC%2BD28XjtlSjsLg%3D
-
Gerber A P, Luschnig S, Krasnow M A, Brown P O, Herschlag D (2006). Genome-wide identification of mRNAs associated with the translational regulator PUMILIO in Drosophila melanogaster. Proc Natl Acad Sci USA, 103(12): 4487–4492
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.12
, pp. 4487-4492
-
-
Gerber, A.P.1
Luschnig, S.2
Krasnow, M.A.3
Brown, P.O.4
Herschlag, D.5
-
70
-
-
44449166478
-
RNA-binding proteins and post-transcriptional gene regulation
-
PID: 18342629, COI: 1:CAS:528:DC%2BD1cXms1Wgtr8%3D
-
Glisovic T, Bachorik J L, Yong J, Dreyfuss G (2008). RNA-binding proteins and post-transcriptional gene regulation. FEBS Lett, 582(14): 1977–1986
-
(2008)
FEBS Lett
, vol.582
, Issue.14
, pp. 1977-1986
-
-
Glisovic, T.1
Bachorik, J.L.2
Yong, J.3
Dreyfuss, G.4
-
71
-
-
36248971198
-
How arginine-rich domains coordinate mRNA maturation events
-
PID: 17873524, COI: 1:CAS:528:DC%2BD2sXhsVWitLnF
-
Godin K S, Varani G (2007). How arginine-rich domains coordinate mRNA maturation events. RNA Biol, 4(2): 69–75
-
(2007)
RNA Biol
, vol.4
, Issue.2
, pp. 69-75
-
-
Godin, K.S.1
Varani, G.2
-
72
-
-
84874025014
-
The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-Γ locus
-
PID: 23415224, COI: 1:CAS:528:DC%2BC3sXis1Oiu7c%3D
-
Gomez J A, Wapinski O L, Yang Y W, Bureau J F, Gopinath S, Monack D M, Chang H Y, Brahic M, Kirkegaard K (2013). The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-Γ locus. Cell, 152(4): 743–754
-
(2013)
Cell
, vol.152
, Issue.4
, pp. 743-754
-
-
Gomez, J.A.1
Wapinski, O.L.2
Yang, Y.W.3
Bureau, J.F.4
Gopinath, S.5
Monack, D.M.6
Chang, H.Y.7
Brahic, M.8
Kirkegaard, K.9
-
73
-
-
72449197125
-
A novel DNMT3B splice variant expressed in tumor and pluripotent cells modulates genomic DNA methylation patterns and displays altered DNA binding
-
PID: 19825994, COI: 1:CAS:528:DC%2BD1MXhtlSqs7nF
-
Gopalakrishnan S, Van Emburgh B O, Shan J, Su Z, Fields C R, Vieweg J, Hamazaki T, Schwartz P H, Terada N, Robertson K D (2009). A novel DNMT3B splice variant expressed in tumor and pluripotent cells modulates genomic DNA methylation patterns and displays altered DNA binding. Mol Cancer Res, 7(10): 1622–1634
-
(2009)
Mol Cancer Res
, vol.7
, Issue.10
, pp. 1622-1634
-
-
Gopalakrishnan, S.1
Van Emburgh, B.O.2
Shan, J.3
Su, Z.4
Fields, C.R.5
Vieweg, J.6
Hamazaki, T.7
Schwartz, P.H.8
Terada, N.9
Robertson, K.D.10
-
74
-
-
77951118936
-
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
-
PID: 20393566, COI: 1:CAS:528:DC%2BC3cXkslaru7w%3D
-
Gupta R A, Shah N, Wang K C, Kim J, Horlings HM, Wong D J, TsaiM C, Hung T, Argani P, Rinn J L, Wang Y, Brzoska P, Kong B, Li R, West R B, van de Vijver M J, Sukumar S, Chang H Y (2010). Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature, 464(7291): 1071–1076
-
(2010)
Nature
, vol.464
, Issue.7291
, pp. 1071-1076
-
-
Gupta, R.A.1
Shah, N.2
Wang, K.C.3
Kim, J.4
Horlings, H.M.5
Wong, D.J.6
TsaiM, C.7
Hung, T.8
Argani, P.9
Rinn, J.L.10
Wang, Y.11
Brzoska, P.12
Kong, B.13
Li, R.14
West, R.B.15
van de Vijver, M.J.16
Sukumar, S.17
Chang, H.Y.18
-
75
-
-
80052869283
-
lincRNAs act in the circuitry controlling pluripotency and differentiation
-
PID: 21874018, COI: 1:CAS:528:DC%2BC3MXhtFers7rL
-
Guttman M, Donaghey J, Carey B W, Garber M, Grenier J K, Munson G, Young G, Lucas A B, Ach R, Bruhn L, Yang X, Amit I, Meissner A, Regev A, Rinn J L, Root D E, Lander E S (2011). lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature, 477(7364): 295–300
-
(2011)
Nature
, vol.477
, Issue.7364
, pp. 295-300
-
-
Guttman, M.1
Donaghey, J.2
Carey, B.W.3
Garber, M.4
Grenier, J.K.5
Munson, G.6
Young, G.7
Lucas, A.B.8
Ach, R.9
Bruhn, L.10
Yang, X.11
Amit, I.12
Meissner, A.13
Regev, A.14
Rinn, J.L.15
Root, D.E.16
Lander, E.S.17
-
76
-
-
77950920903
-
Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP
-
PID: 20371350, COI: 1:CAS:528:DC%2BC3cXlsVSgtbg%3D
-
Hafner M, Landthaler M, Burger L, Khorshid M, Hausser J, Berninger P, Rothballer A, Ascano M Jr, Jungkamp A C, Munschauer M, Ulrich A, Wardle G S, Dewell S, Zavolan M, Tuschl T (2010a). Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. Cell, 141(1): 129–141
-
(2010)
Cell
, vol.141
, Issue.1
, pp. 129-141
-
-
Hafner, M.1
Landthaler, M.2
Burger, L.3
Khorshid, M.4
Hausser, J.5
Berninger, P.6
Rothballer, A.7
Ascano, M.8
Jungkamp, A.C.9
Munschauer, M.10
Ulrich, A.11
Wardle, G.S.12
Dewell, S.13
Zavolan, M.14
Tuschl, T.15
-
77
-
-
80055101895
-
PAR-CliP—a method to identify transcriptome-wide the binding sites of RNA binding proteins
-
PID: 20644507
-
Hafner M, Landthaler M, Burger L, Khorshid M, Hausser J, Berninger P, Rothballer A, Ascano M, Jungkamp A C, Munschauer M, Ulrich A, Wardle G S, Dewell S, Zavolan M, Tuschl T (2010b). PAR-CliP—a method to identify transcriptome-wide the binding sites of RNA binding proteins. J Vis Exp, (41): 2034
-
(2010)
J Vis Exp
, vol.41
, pp. 2034
-
-
Hafner, M.1
Landthaler, M.2
Burger, L.3
Khorshid, M.4
Hausser, J.5
Berninger, P.6
Rothballer, A.7
Ascano, M.8
Jungkamp, A.C.9
Munschauer, M.10
Ulrich, A.11
Wardle, G.S.12
Dewell, S.13
Zavolan, M.14
Tuschl, T.15
-
78
-
-
84875966667
-
Identification of mRNAs bound and regulated by human LIN28 proteins and molecular requirements for RNA recognition
-
PID: 23481595, COI: 1:CAS:528:DC%2BC3sXmvFKksL8%3D
-
Hafner M, Max K E, Bandaru P, Morozov P, Gerstberger S, Brown M, Molina H, Tuschl T (2013). Identification of mRNAs bound and regulated by human LIN28 proteins and molecular requirements for RNA recognition. RNA, 19(5): 613–626
-
(2013)
RNA
, vol.19
, Issue.5
, pp. 613-626
-
-
Hafner, M.1
Max, K.E.2
Bandaru, P.3
Morozov, P.4
Gerstberger, S.5
Brown, M.6
Molina, H.7
Tuschl, T.8
-
79
-
-
70349820140
-
Lin28 recruits the TUTase Zcchc11 to inhibit let-7 maturation in mouse embryonic stem cells
-
PID: 19713958, COI: 1:CAS:528:DC%2BD1MXhtVKjsbbI
-
Hagan J P, Piskounova E, Gregory R I (2009). Lin28 recruits the TUTase Zcchc11 to inhibit let-7 maturation in mouse embryonic stem cells. Nat Struct Mol Biol, 16(10): 1021–1025
-
(2009)
Nat Struct Mol Biol
, vol.16
, Issue.10
, pp. 1021-1025
-
-
Hagan, J.P.1
Piskounova, E.2
Gregory, R.I.3
-
80
-
-
84878995293
-
MBNL proteins repress ES-cell-specific alternative splicing and reprogramming
-
PID: 23739326, COI: 1:CAS:528:DC%2BC3sXovVSksbY%3D
-
Han H, Irimia M, Ross P J, Sung H K, Alipanahi B, David L, Golipour A, Gabut M, Michael I P, Nachman E N, Wang E, Trcka D, Thompson T, O’Hanlon D, Slobodeniuc V, Barbosa-Morais N L, Burge C B, Moffat J, Frey B J, Nagy A, Ellis J, Wrana J L, Blencowe B J (2013). MBNL proteins repress ES-cell-specific alternative splicing and reprogramming. Nature, 498(7453): 241–245
-
(2013)
Nature
, vol.498
, Issue.7453
, pp. 241-245
-
-
Han, H.1
Irimia, M.2
Ross, P.J.3
Sung, H.K.4
Alipanahi, B.5
David, L.6
Golipour, A.7
Gabut, M.8
Michael, I.P.9
Nachman, E.N.10
Wang, E.11
Trcka, D.12
Thompson, T.13
O’Hanlon, D.14
Slobodeniuc, V.15
Barbosa-Morais, N.L.16
Burge, C.B.17
Moffat, J.18
Frey, B.J.19
Nagy, A.20
Ellis, J.21
Wrana, J.L.22
Blencowe, B.J.23
more..
-
81
-
-
78449254310
-
Genome-wide identification of targets and function of individual MicroRNAs in mouse embryonic stem cells
-
PID: 20975942
-
Hanina S A, Mifsud W, Down T A, Hayashi K, O’Carroll D, Lao K, Miska E A, Surani M A (2010). Genome-wide identification of targets and function of individual MicroRNAs in mouse embryonic stem cells. PLoS Genet, 6(10): e1001163
-
(2010)
PLoS Genet
, vol.6
, Issue.10
, pp. e1001163
-
-
Hanina, S.A.1
Mifsud, W.2
Down, T.A.3
Hayashi, K.4
O’Carroll, D.5
Lao, K.6
Miska, E.A.7
Surani, M.A.8
-
82
-
-
78149487692
-
Pluripotency and cellular reprogramming: facts, hypotheses, unresolved issues
-
PID: 21074044, COI: 1:CAS:528:DC%2BC3cXhsVahtbrL
-
Hanna J H, Saha K, Jaenisch R (2010). Pluripotency and cellular reprogramming: facts, hypotheses, unresolved issues. Cell, 143(4): 508–525
-
(2010)
Cell
, vol.143
, Issue.4
, pp. 508-525
-
-
Hanna, J.H.1
Saha, K.2
Jaenisch, R.3
-
83
-
-
51349086310
-
Paraspeckle protein p54nrb links Sox9-mediated transcription with RNA processing during chondrogenesis in mice
-
PID: 18677406, COI: 1:CAS:528:DC%2BD1cXhtV2isb3F
-
Hata K, Nishimura R, Muramatsu S, Matsuda A, Matsubara T, Amano K, Ikeda F, Harley V R, Yoneda T (2008). Paraspeckle protein p54nrb links Sox9-mediated transcription with RNA processing during chondrogenesis in mice. J Clin Invest, 118(9): 3098–3108
-
(2008)
J Clin Invest
, vol.118
, Issue.9
, pp. 3098-3108
-
-
Hata, K.1
Nishimura, R.2
Muramatsu, S.3
Matsuda, A.4
Matsubara, T.5
Amano, K.6
Ikeda, F.7
Harley, V.R.8
Yoneda, T.9
-
84
-
-
53049092465
-
Dynamic equilibrium and heterogeneity of mouse pluripotent stem cells with distinct functional and epigenetic states
-
PID: 18940731, COI: 1:CAS:528:DC%2BD1cXht12it7bJ
-
Hayashi K, Lopes S M, Tang F, Surani M A (2008). Dynamic equilibrium and heterogeneity of mouse pluripotent stem cells with distinct functional and epigenetic states. Cell Stem Cell, 3(4): 391–401
-
(2008)
Cell Stem Cell
, vol.3
, Issue.4
, pp. 391-401
-
-
Hayashi, K.1
Lopes, S.M.2
Tang, F.3
Surani, M.A.4
-
85
-
-
53949088050
-
Lin28 mediates the terminal uridylation of let-7 precursor MicroRNA
-
PID: 18951094, COI: 1:CAS:528:DC%2BD1cXhtlehsbrF
-
Heo I, Joo C, Cho J, Ha M, Han J, Kim V N (2008). Lin28 mediates the terminal uridylation of let-7 precursor MicroRNA. Mol Cell, 32(2): 276–284
-
(2008)
Mol Cell
, vol.32
, Issue.2
, pp. 276-284
-
-
Heo, I.1
Joo, C.2
Cho, J.3
Ha, M.4
Han, J.5
Kim, V.N.6
-
86
-
-
68749102148
-
TUT4 in concert with Lin28 suppresses microRNA biogenesis through pre-microRNA uridylation
-
PID: 19703396, COI: 1:CAS:528:DC%2BD1MXhsVCjs7rO
-
Heo I, Joo C, Kim Y K, Ha M, Yoon M J, Cho J, Yeom K H, Han J, Kim V N (2009). TUT4 in concert with Lin28 suppresses microRNA biogenesis through pre-microRNA uridylation. Cell, 138(4): 696–708
-
(2009)
Cell
, vol.138
, Issue.4
, pp. 696-708
-
-
Heo, I.1
Joo, C.2
Kim, Y.K.3
Ha, M.4
Yoon, M.J.5
Cho, J.6
Yeom, K.H.7
Han, J.8
Kim, V.N.9
-
87
-
-
64349096829
-
A genome-wide RNAi screen identifies a new transcriptional module required for self-renewal
-
PID: 19339689, COI: 1:CAS:528:DC%2BD1MXks1Srurw%3D
-
Hu G, Kim J, Xu Q, Leng Y, Orkin S H, Elledge S J (2009). A genome-wide RNAi screen identifies a new transcriptional module required for self-renewal. Genes Dev, 23(7): 837–848
-
(2009)
Genes Dev
, vol.23
, Issue.7
, pp. 837-848
-
-
Hu, G.1
Kim, J.2
Xu, Q.3
Leng, Y.4
Orkin, S.H.5
Elledge, S.J.6
-
88
-
-
0344211508
-
SR splicing factors serve as adapter proteins for TAP-dependent mRNA export
-
PID: 12667464, COI: 1:CAS:528:DC%2BD3sXjtVWktLY%3D
-
Huang Y, Gattoni R, Stévenin J, Steitz J A (2003). SR splicing factors serve as adapter proteins for TAP-dependent mRNA export. Mol Cell, 11(3): 837–843
-
(2003)
Mol Cell
, vol.11
, Issue.3
, pp. 837-843
-
-
Huang, Y.1
Gattoni, R.2
Stévenin, J.3
Steitz, J.A.4
-
89
-
-
18444402182
-
The Ensembl genome database project
-
PID: 11752248, COI: 1:CAS:528:DC%2BD38Xht12ksbY%3D
-
Hubbard T, Barker D, Birney E, Cameron G, Chen Y, Clark L, Cox T, Cuff J, Curwen V, Down T, Durbin R, Eyras E, Gilbert J, Hammond M, Huminiecki L, Kasprzyk A, Lehvaslaiho H, Lijnzaad P, Melsopp C, Mongin E, Pettett R, Pocock M, Potter S, Rust A, Schmidt E, Searle S, Slater G, Smith J, Spooner W, Stabenau A, Stalker J, Stupka E, Ureta-Vidal A, Vastrik I, Clamp M (2002). The Ensembl genome database project. Nucleic Acids Res, 30(1): 38–41
-
(2002)
Nucleic Acids Res
, vol.30
, Issue.1
, pp. 38-41
-
-
Hubbard, T.1
Barker, D.2
Birney, E.3
Cameron, G.4
Chen, Y.5
Clark, L.6
Cox, T.7
Cuff, J.8
Curwen, V.9
Down, T.10
Durbin, R.11
Eyras, E.12
Gilbert, J.13
Hammond, M.14
Huminiecki, L.15
Kasprzyk, A.16
Lehvaslaiho, H.17
Lijnzaad, P.18
Melsopp, C.19
Mongin, E.20
Pettett, R.21
Pocock, M.22
Potter, S.23
Rust, A.24
Schmidt, E.25
Searle, S.26
Slater, G.27
Smith, J.28
Spooner, W.29
Stabenau, A.30
Stalker, J.31
Stupka, E.32
Ureta-Vidal, A.33
Vastrik, I.34
Clamp, M.35
more..
-
90
-
-
0035800521
-
A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA
-
PID: 11452083
-
Hutvágner G, McLachlan J, Pasquinelli A E, Bálint E, Tuschl T, Zamore P D (2001). A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA. Science, 293(5531): 834–838
-
(2001)
Science
, vol.293
, Issue.5531
, pp. 834-838
-
-
Hutvágner, G.1
McLachlan, J.2
Pasquinelli, A.E.3
Bálint, E.4
Tuschl, T.5
Zamore, P.D.6
-
91
-
-
37549014207
-
Argonaute proteins: key players in RNA silencing
-
PID: 18073770, COI: 1:CAS:528:DC%2BD2sXhsVKrsr3P
-
Hutvagner G, Simard M J (2008). Argonaute proteins: key players in RNA silencing. Nat Rev Mol Cell Biol, 9(1): 22–32
-
(2008)
Nat Rev Mol Cell Biol
, vol.9
, Issue.1
, pp. 22-32
-
-
Hutvagner, G.1
Simard, M.J.2
-
92
-
-
84866410479
-
Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing
-
PID: 22980975, COI: 1:CAS:528:DC%2BC38XhtlKrsL7M
-
Imielinski M, Berger A H, Hammerman P S, Hernandez B, Pugh T J, Hodis E, Cho J, Suh J, Capelletti M, Sivachenko A, Sougnez C, Auclair D, Lawrence M S, Stojanov P, Cibulskis K, Choi K, de Waal L, Sharifnia T, Brooks A, Greulich H, Banerji S, Zander T, Seidel D, Leenders F, Ansén S, Ludwig C, Engel-Riedel W, Stoelben E, Wolf J, Goparju C, Thompson K, Winckler W, Kwiatkowski D, Johnson B E, Jänne P A, Miller V A, Pao W, Travis W D, Pass H I, Gabriel S B, Lander E S, Thomas R K, Garraway L A, Getz G, Meyerson M (2012). Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing. Cell, 150(6): 1107–1120
-
(2012)
Cell
, vol.150
, Issue.6
, pp. 1107-1120
-
-
Imielinski, M.1
Berger, A.H.2
Hammerman, P.S.3
Hernandez, B.4
Pugh, T.J.5
Hodis, E.6
Cho, J.7
Suh, J.8
Capelletti, M.9
Sivachenko, A.10
Sougnez, C.11
Auclair, D.12
Lawrence, M.S.13
Stojanov, P.14
Cibulskis, K.15
Choi, K.16
de Waal, L.17
Sharifnia, T.18
Brooks, A.19
Greulich, H.20
Banerji, S.21
Zander, T.22
Seidel, D.23
Leenders, F.24
Ansén, S.25
Ludwig, C.26
Engel-Riedel, W.27
Stoelben, E.28
Wolf, J.29
Goparju, C.30
Thompson, K.31
Winckler, W.32
Kwiatkowski, D.33
Johnson, B.E.34
Jänne, P.A.35
Miller, V.A.36
Pao, W.37
Travis, W.D.38
Pass, H.I.39
Gabriel, S.B.40
Lander, E.S.41
Thomas, R.K.42
Garraway, L.A.43
Getz, G.44
Meyerson, M.45
more..
-
93
-
-
84864448921
-
Position-dependent FUS-RNA interactions regulate alternative splicing events and transcriptions
-
PID: 22829983
-
Ishigaki S, Masuda A, Fujioka Y, Iguchi Y, Katsuno M, Shibata A, Urano F, Sobue G, Ohno K (2012). Position-dependent FUS-RNA interactions regulate alternative splicing events and transcriptions. Sci Rep, 2: 529
-
(2012)
Sci Rep
, vol.2
, pp. 529
-
-
Ishigaki, S.1
Masuda, A.2
Fujioka, Y.3
Iguchi, Y.4
Katsuno, M.5
Shibata, A.6
Urano, F.7
Sobue, G.8
Ohno, K.9
-
94
-
-
34247854948
-
Identifying candidate colon cancer tumor suppressor genes using inhibition of nonsense-mediated mRNA decay in colon cancer cells
-
PID: 17086209, COI: 1:CAS:528:DC%2BD2sXkvVansbo%3D
-
Ivanov I, Lo K C, Hawthorn L, Cowell J K, Ionov Y (2007). Identifying candidate colon cancer tumor suppressor genes using inhibition of nonsense-mediated mRNA decay in colon cancer cells. Oncogene, 26(20): 2873–2884
-
(2007)
Oncogene
, vol.26
, Issue.20
, pp. 2873-2884
-
-
Ivanov, I.1
Lo, K.C.2
Hawthorn, L.3
Cowell, J.K.4
Ionov, Y.5
-
95
-
-
33746773659
-
Dissecting self-renewal in stem cells with RNA interference
-
PID: 16767105, COI: 1:CAS:528:DC%2BD28Xnsl2js7s%3D
-
Ivanova N, Dobrin R, Lu R, Kotenko I, Levorse J, DeCoste C, Schafer X, Lun Y, Lemischka I R (2006). Dissecting self-renewal in stem cells with RNA interference. Nature, 442(7102): 533–538
-
(2006)
Nature
, vol.442
, Issue.7102
, pp. 533-538
-
-
Ivanova, N.1
Dobrin, R.2
Lu, R.3
Kotenko, I.4
Levorse, J.5
DeCoste, C.6
Schafer, X.7
Lun, Y.8
Lemischka, I.R.9
-
96
-
-
79957573197
-
ECAT11/L1td1 is enriched in ESCs and rapidly activated during iPSC generation, but it is dispensable for the maintenance and induction of pluripotency
-
PID: 21637830, COI: 1:CAS:528:DC%2BC3MXntVaitrg%3D
-
Iwabuchi K A, Yamakawa T, Sato Y, Ichisaka T, Takahashi K, Okita K, Yamanaka S (2011). ECAT11/L1td1 is enriched in ESCs and rapidly activated during iPSC generation, but it is dispensable for the maintenance and induction of pluripotency. PLoS ONE, 6(5): e20461
-
(2011)
PLoS ONE
, vol.6
, Issue.5
, pp. e20461
-
-
Iwabuchi, K.A.1
Yamakawa, T.2
Sato, Y.3
Ichisaka, T.4
Takahashi, K.5
Okita, K.6
Yamanaka, S.7
-
97
-
-
84896324070
-
Rbfox2 controls autoregulation in RNA-binding protein networks
-
PID: 24637117, COI: 1:CAS:528:DC%2BC2cXlsF2ntrw%3D
-
Jangi M, Boutz P L, Paul P, Sharp P A (2014). Rbfox2 controls autoregulation in RNA-binding protein networks. Genes Dev, 28(6): 637–651
-
(2014)
Genes Dev
, vol.28
, Issue.6
, pp. 637-651
-
-
Jangi, M.1
Boutz, P.L.2
Paul, P.3
Sharp, P.A.4
-
98
-
-
84934437354
-
CLIP: crosslinking and immunoprecipitation of in vivo RNA targets of RNA-binding proteins
-
PID: 18982285, COI: 1:CAS:528:DC%2BD1cXht1CmtLfP
-
Jensen K B, Darnell R B (2008). CLIP: crosslinking and immunoprecipitation of in vivo RNA targets of RNA-binding proteins. Methods Mol Biol, 488: 85–98
-
(2008)
Methods Mol Biol
, vol.488
, pp. 85-98
-
-
Jensen, K.B.1
Darnell, R.B.2
-
99
-
-
84859189208
-
Poly(ADP-ribose) controls DE-cadherin-dependent stem cell maintenance and oocyte localization
-
PID: 22453833
-
Ji Y, Tulin A V (2012). Poly(ADP-ribose) controls DE-cadherin-dependent stem cell maintenance and oocyte localization. Nat Commun, 3: 760
-
(2012)
Nat Commun
, vol.3
, pp. 760
-
-
Ji, Y.1
Tulin, A.V.2
-
100
-
-
66049104920
-
Progressive lengthening of 3’ untranslated regions of mRNAs by alternative polyadenylation during mouse embryonic development
-
COI: 1:CAS:528:DC%2BD1MXot1Sks7g%3D
-
Ji Z, Lee J Y, Pan Z H, Jiang B J, Tian B (2009). Progressive lengthening of 3’ untranslated regions of mRNAs by alternative polyadenylation during mouse embryonic development. Proc Natl Acad Sci USA, 106(17): 9535–9535
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.17
, pp. 9535
-
-
Ji, Z.1
Lee, J.Y.2
Pan, Z.H.3
Jiang, B.J.4
Tian, B.5
-
101
-
-
77949538391
-
Reprogramming of 3’ Untranslated Regions of mRNAs by Alternative Polyadenylation in Generation of Pluripotent Stem Cells from Different Cell Types
-
PID: 20037631
-
Ji Z, Tian B (2009). Reprogramming of 3’ Untranslated Regions of mRNAs by Alternative Polyadenylation in Generation of Pluripotent Stem Cells from Different Cell Types. PLoS ONE, 4(12): e8419
-
(2009)
PLoS ONE
, vol.4
, Issue.12
, pp. e8419
-
-
Ji, Z.1
Tian, B.2
-
102
-
-
0347623371
-
Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays
-
PID: 14684825, COI: 1:CAS:528:DC%2BD3sXpvVCjs7Y%3D
-
Johnson J M, Castle J, Garrett-Engele P, Kan Z, Loerch P M, Armour C D, Santos R, Schadt E E, Stoughton R, Shoemaker D D (2003). Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays. Science, 302(5653): 2141–2144
-
(2003)
Science
, vol.302
, Issue.5653
, pp. 2141-2144
-
-
Johnson, J.M.1
Castle, J.2
Garrett-Engele, P.3
Kan, Z.4
Loerch, P.M.5
Armour, C.D.6
Santos, R.7
Schadt, E.E.8
Stoughton, R.9
Shoemaker, D.D.10
-
103
-
-
66149160608
-
Embryonic stem cell-specific microRNAs promote induced pluripotency
-
PID: 19363475, COI: 1:CAS:528:DC%2BD1MXksVekt78%3D
-
Judson R L, Babiarz J E, Venere M, Blelloch R (2009). Embryonic stem cell-specific microRNAs promote induced pluripotency. Nat Biotechnol, 27(5): 459–461
-
(2009)
Nat Biotechnol
, vol.27
, Issue.5
, pp. 459-461
-
-
Judson, R.L.1
Babiarz, J.E.2
Venere, M.3
Blelloch, R.4
-
104
-
-
84892889808
-
Interactions between JARID2 and noncoding RNAs regulate PRC2 recruitment to chromatin
-
PID: 24374312, COI: 1:CAS:528:DC%2BC2cXlvFCq
-
Kaneko S, Bonasio R, Saldaña-Meyer R, Yoshida T, Son J, Nishino K, Umezawa A, Reinberg D (2014). Interactions between JARID2 and noncoding RNAs regulate PRC2 recruitment to chromatin. Mol Cell, 53(2): 290–300
-
(2014)
Mol Cell
, vol.53
, Issue.2
, pp. 290-300
-
-
Kaneko, S.1
Bonasio, R.2
Saldaña-Meyer, R.3
Yoshida, T.4
Son, J.5
Nishino, K.6
Umezawa, A.7
Reinberg, D.8
-
105
-
-
78649807567
-
Phosphorylation of the PRC2 component Ezh2 is cell cycleregulated and up-regulates its binding to ncRNA
-
PID: 21123648, COI: 1:CAS:528:DC%2BC3cXhsF2jsL3P
-
Kaneko S, Li G, Son J, Xu C F, Margueron R, Neubert T A, Reinberg D (2010). Phosphorylation of the PRC2 component Ezh2 is cell cycleregulated and up-regulates its binding to ncRNA. Genes Dev, 24(23): 2615–2620
-
(2010)
Genes Dev
, vol.24
, Issue.23
, pp. 2615-2620
-
-
Kaneko, S.1
Li, G.2
Son, J.3
Xu, C.F.4
Margueron, R.5
Neubert, T.A.6
Reinberg, D.7
-
106
-
-
84887460647
-
PRC2 binds active promoters and contacts nascent RNAs in embryonic stem cells
-
PID: 24141703, COI: 1:CAS:528:DC%2BC3sXhs1ChsrbN
-
Kaneko S, Son J, Shen S S, Reinberg D, Bonasio R (2013). PRC2 binds active promoters and contacts nascent RNAs in embryonic stem cells. Nat Struct Mol Biol, 20(11): 1258–1264
-
(2013)
Nat Struct Mol Biol
, vol.20
, Issue.11
, pp. 1258-1264
-
-
Kaneko, S.1
Son, J.2
Shen, S.S.3
Reinberg, D.4
Bonasio, R.5
-
107
-
-
13844294261
-
Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing
-
PID: 15713842, COI: 1:CAS:528:DC%2BD2MXhs1OhsL4%3D
-
Kanellopoulou C, Muljo S A, Kung A L, Ganesan S, Drapkin R, Jenuwein T, Livingston D M, Rajewsky K (2005). Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing. Genes Dev, 19(4): 489–501
-
(2005)
Genes Dev
, vol.19
, Issue.4
, pp. 489-501
-
-
Kanellopoulou, C.1
Muljo, S.A.2
Kung, A.L.3
Ganesan, S.4
Drapkin, R.5
Jenuwein, T.6
Livingston, D.M.7
Rajewsky, K.8
-
108
-
-
77953107585
-
Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2
-
PID: 20542000, COI: 1:CAS:528:DC%2BC3cXotFGkt7c%3D
-
Kanhere A, Viiri K, Araújo C C, Rasaiyaah J, Bouwman R D, Whyte W A, Pereira C F, Brookes E, Walker K, Bell G W, Pombo A, Fisher A G, Young R A, Jenner R G (2010). Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2. Mol Cell, 38(5): 675–688
-
(2010)
Mol Cell
, vol.38
, Issue.5
, pp. 675-688
-
-
Kanhere, A.1
Viiri, K.2
Araújo, C.C.3
Rasaiyaah, J.4
Bouwman, R.D.5
Whyte, W.A.6
Pereira, C.F.7
Brookes, E.8
Walker, K.9
Bell, G.W.10
Pombo, A.11
Fisher, A.G.12
Young, R.A.13
Jenner, R.G.14
-
109
-
-
84877297850
-
Reduced Oct4 expression directs a robust pluripotent state with distinct signaling activity and increased enhancer occupancy by Oct4 and Nanog
-
PID: 23642364, COI: 1:CAS:528:DC%2BC3sXmvF2gtbY%3D
-
Karwacki-Neisius V, Göke J, Osorno R, Halbritter F, Ng J H., Weiße A Y., Wong F C., Gagliardi A, Mullin N P., Festuccia N, Colby D, Tomlinson S R., Ng H H., Chambers I (2013). Reduced Oct4 expression directs a robust pluripotent state with distinct signaling activity and increased enhancer occupancy by Oct4 and Nanog. Cell Stem Cell, 12(5): 531–545
-
(2013)
Cell Stem Cell
, vol.12
, Issue.5
, pp. 531-545
-
-
Karwacki-Neisius, V.1
Göke, J.2
Osorno, R.3
Halbritter, F.4
Ng, J.H.5
Weiße, A.Y.6
Wong, F.C.7
Gagliardi, A.8
Mullin, N.P.9
Festuccia, N.10
Colby, D.11
Tomlinson, S.R.12
Ng, H.H.13
Chambers, I.14
-
110
-
-
67650810301
-
Regulation of stem cell pluripotency and differentiation involves a mutual regulatory circuit of the NANOG, OCT4, and SOX2 pluripotency transcription factors with polycomb repressive complexes and stem cell microRNAs
-
PID: 19480567, COI: 1:CAS:528:DC%2BD1MXhtFWhtLfJ
-
Kashyap V, Rezende N C, Scotland K B, Shaffer S M, Persson J L, Gudas L J, Mongan N P (2009). Regulation of stem cell pluripotency and differentiation involves a mutual regulatory circuit of the NANOG, OCT4, and SOX2 pluripotency transcription factors with polycomb repressive complexes and stem cell microRNAs. Stem Cells Dev, 18(7): 1093–1108
-
(2009)
Stem Cells Dev
, vol.18
, Issue.7
, pp. 1093-1108
-
-
Kashyap, V.1
Rezende, N.C.2
Scotland, K.B.3
Shaffer, S.M.4
Persson, J.L.5
Gudas, L.J.6
Mongan, N.P.7
-
111
-
-
84860473143
-
mRNA export and the TREX complex
-
PID: 22178508, COI: 1:CAS:528:DC%2BC38XmtlWhtLw%3D
-
Katahira J (2012). mRNA export and the TREX complex. Biochim Biophys Acta, 1819(6): 507–513
-
(2012)
Biochim Biophys Acta
, vol.1819
, Issue.6
, pp. 507-513
-
-
Katahira, J.1
-
112
-
-
67650921949
-
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
-
PID: 19571010, COI: 1:CAS:528:DC%2BD1MXptVWjsr0%3D
-
Khalil A M, Guttman M, Huarte M, Garber M, Raj A, Rivea Morales D, Thomas K, Presser A, Bernstein B E, van Oudenaarden A, Regev A, Lander E S, Rinn J L (2009). Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci USA, 106(28): 11667–11672
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.28
, pp. 11667-11672
-
-
Khalil, A.M.1
Guttman, M.2
Huarte, M.3
Garber, M.4
Raj, A.5
Rivea Morales, D.6
Thomas, K.7
Presser, A.8
Bernstein, B.E.9
van Oudenaarden, A.10
Regev, A.11
Lander, E.S.12
Rinn, J.L.13
-
113
-
-
0026740718
-
Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box
-
PID: 1628625, COI: 1:CAS:528:DyaK3sXisV2qtb0%3D
-
Kiledjian M, Dreyfuss G (1992). Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box. EMBO J, 11(7): 2655–2664
-
(1992)
EMBO J
, vol.11
, Issue.7
, pp. 2655-2664
-
-
Kiledjian, M.1
Dreyfuss, G.2
-
114
-
-
84866366678
-
Non-canonical microRNAs miR-320 and miR-702 promote proliferation in Dgcr8-deficient embryonic stem cells
-
PID: 22925886, COI: 1:CAS:528:DC%2BC38XhtlCjtb%2FF
-
Kim B M, Choi M Y (2012). Non-canonical microRNAs miR-320 and miR-702 promote proliferation in Dgcr8-deficient embryonic stem cells. Biochem Biophys Res Commun, 426(2): 183–189
-
(2012)
Biochem Biophys Res Commun
, vol.426
, Issue.2
, pp. 183-189
-
-
Kim, B.M.1
Choi, M.Y.2
-
115
-
-
55849135596
-
MicroRNA-directed transcriptional gene silencing in mammalian cells
-
PID: 18852463, COI: 1:CAS:528:DC%2BD1cXhtlSntLnM
-
Kim D H, Saetrom P, Snøve O Jr, Rossi J J (2008). MicroRNA-directed transcriptional gene silencing in mammalian cells. Proc Natl Acad Sci USA, 105(42): 16230–16235
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.42
, pp. 16230-16235
-
-
Kim, D.H.1
Saetrom, P.2
Snøve, O.3
Rossi, J.J.4
-
116
-
-
3042781030
-
Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27
-
PID: 15231737, COI: 1:CAS:528:DC%2BD2cXlslWnu70%3D
-
Kirmizis A, Bartley S M, Kuzmichev A, Margueron R, Reinberg D, Green R, Farnham P J (2004). Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27. Genes Dev, 18(13): 1592–1605
-
(2004)
Genes Dev
, vol.18
, Issue.13
, pp. 1592-1605
-
-
Kirmizis, A.1
Bartley, S.M.2
Kuzmichev, A.3
Margueron, R.4
Reinberg, D.5
Green, R.6
Farnham, P.J.7
-
117
-
-
77955902024
-
The widespread regulation of microRNA biogenesis, function and decay
-
PID: 20661255, COI: 1:CAS:528:DC%2BC3cXhtVCnurzF
-
Krol J, Loedige I, Filipowicz W (2010). The widespread regulation of microRNA biogenesis, function and decay. Nat Rev Genet, 11(9): 597–610
-
(2010)
Nat Rev Genet
, vol.11
, Issue.9
, pp. 597-610
-
-
Krol, J.1
Loedige, I.2
Filipowicz, W.3
-
118
-
-
43649103253
-
Detailed characterization of the mouse embryonic stem cell transcriptome reveals novel genes and intergenic splicing associated with pluripotency
-
PID: 18400104
-
Kunarso G, Wong K Y, Stanton L W, Lipovich L (2008). Detailed characterization of the mouse embryonic stem cell transcriptome reveals novel genes and intergenic splicing associated with pluripotency. BMC Genomics, 9(1): 155
-
(2008)
BMC Genomics
, vol.9
, Issue.1
, pp. 155
-
-
Kunarso, G.1
Wong, K.Y.2
Stanton, L.W.3
Lipovich, L.4
-
119
-
-
0037111831
-
Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein
-
PID: 12435631, COI: 1:CAS:528:DC%2BD38XovVejsLY%3D
-
Kuzmichev A, Nishioka K, Erdjument-Bromage H, Tempst P, Reinberg D (2002). Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein. Genes Dev, 16(22): 2893–2905
-
(2002)
Genes Dev
, vol.16
, Issue.22
, pp. 2893-2905
-
-
Kuzmichev, A.1
Nishioka, K.2
Erdjument-Bromage, H.3
Tempst, P.4
Reinberg, D.5
-
120
-
-
84883741725
-
The RNA-binding protein repertoire of embryonic stem cells
-
PID: 23912277, COI: 1:CAS:528:DC%2BC3sXht1Whs77P
-
Kwon S C, Yi H, Eichelbaum K, Föhr S, Fischer B, You K T, Castello A, Krijgsveld J, Hentze M W, Kim V N (2013). The RNA-binding protein repertoire of embryonic stem cells. Nat Struct Mol Biol, 20(9): 1122–1130
-
(2013)
Nat Struct Mol Biol
, vol.20
, Issue.9
, pp. 1122-1130
-
-
Kwon, S.C.1
Yi, H.2
Eichelbaum, K.3
Föhr, S.4
Fischer, B.5
You, K.T.6
Castello, A.7
Krijgsveld, J.8
Hentze, M.W.9
Kim, V.N.10
-
121
-
-
84898878378
-
Fip1 regulates mRNA alternative polyadenylation to promote stem cell self-renewal
-
PID: 24596251, COI: 1:CAS:528:DC%2BC2cXhtV2iu7zF
-
Lackford B, Yao C, Charles G M, Weng L, Zheng X, Choi E A, Xie X, Wan J, Xing Y, Freudenberg J M, Yang P, Jothi R, Hu G, Shi Y (2014). Fip1 regulates mRNA alternative polyadenylation to promote stem cell self-renewal. EMBO J, 33(8): 878–889
-
(2014)
EMBO J
, vol.33
, Issue.8
, pp. 878-889
-
-
Lackford, B.1
Yao, C.2
Charles, G.M.3
Weng, L.4
Zheng, X.5
Choi, E.A.6
Xie, X.7
Wan, J.8
Xing, Y.9
Freudenberg, J.M.10
Yang, P.11
Jothi, R.12
Hu, G.13
Shi, Y.14
-
122
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
PID: 11237011, COI: 1:CAS:528:DC%2BD3MXhsFCjtLc%3D
-
Lander E S, Linton L M, Birren B, Nusbaum C, Zody M C, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, Kann L, Lehoczky J, LeVine R, McEwan P, McKernan K, Meldrim J, Mesirov J P, Miranda C, Morris W, Naylor J, Raymond C, Rosetti M, Santos R, Sheridan A, Sougnez C, Stange-Thomann N, Stojanovic N, Subramanian A, Wyman D, Rogers J, Sulston J, Ainscough R, Beck S, Bentley D, Burton J, Clee C, Carter N, Coulson A, Deadman R, Deloukas P, Dunham A, Dunham I, Durbin R, French L, Grafham D, Gregory S, Hubbard T, Humphray S, Hunt A, Jones M, Lloyd C, McMurray A, Matthews L, Mercer S, Milne S, Mullikin J C, Mungall A, Plumb R, Ross M, Shownkeen R, Sims S, Waterston R H, Wilson R K, Hillier L W, McPherson J D, Marra M A, Mardis E R, Fulton L A, Chinwalla A T, Pepin K H, Gish W R, Chissoe S L, Wendl M C, Delehaunty K D, Miner T L, Delehaunty A, Kramer J B, Cook L L, Fulton R S, Johnson D L, Minx P J, Clifton S W, Hawkins T, Branscomb E, Predki P, Richardson P, Wenning S, Slezak T, Doggett N, Cheng J F, Olsen A, Lucas S, Elkin C, Uberbacher E, Frazier M, Gibbs R A, Muzny D M, Scherer S E, Bouck J B, Sodergren E J, Worley K C, Rives C M, Gorrell J H, Metzker M L, Naylor S L, Kucherlapati R S, Nelson D L, Weinstock GM, Sakaki Y, Fujiyama A, Hattori M, Yada T, Toyoda A, Itoh T, Kawagoe C, Watanabe H, Totoki Y, Taylor T, Weissenbach J, Heilig R, Saurin W, Artiguenave F, Brottier P, Bruls T, Pelletier E, Robert C, Wincker P, Smith D R, Doucette-Stamm L, Rubenfield M, Weinstock K, Lee H M, Dubois J, Rosenthal A, Platzer M, Nyakatura G, Taudien S, Rump A, Yang H, Yu J, Wang J, Huang G, Gu J, Hood L, Rowen L, Madan A, Qin S, Davis R W, Federspiel N A, Abola A P, Proctor M J, Myers R M, Schmutz J, Dickson M, Grimwood J, Cox D R, Olson M V, Kaul R, Raymond C, Shimizu N, Kawasaki K, Minoshima S, Evans G A, Athanasiou M, Schultz R, Roe B A, Chen F, Pan H, Ramser J, Lehrach H, Reinhardt R, McCombie W R, de la Bastide M, Dedhia N, Blöcker H, Hornischer K, Nordsiek G, Agarwala R, Aravind L, Bailey J A, Bateman A, Batzoglou S, Birney E, Bork P, Brown D G, Burge C B, Cerutti L, Chen H C, Church D, Clamp M, Copley R R, Doerks T, Eddy S R, Eichler E E, Furey T S, Galagan J, Gilbert J G, Harmon C, Hayashizaki Y, Haussler D, Hermjakob H, Hokamp K, Jang W, Johnson L S, Jones T A, Kasif S, Kaspryzk A, Kennedy S, Kent WJ, Kitts P, Koonin E V, Korf I, Kulp D, Lancet D, Lowe T M, McLysaght A, Mikkelsen T, Moran J V, Mulder N, Pollara V J, Ponting C P, Schuler G, Schultz J, Slater G, Smit A F, Stupka E, Szustakowski J, Thierry-Mieg D, Thierry-Mieg J, Wagner L, Wallis J, Wheeler R, Williams A, Wolf Y I, Wolfe K H, Yang S P, Yeh R F, Collins F, Guyer M S, Peterson J, Felsenfeld A, Wetterstrand K A, Patrinos A, Morgan M J, de Jong P, Catanese J J, Osoegawa K, Shizuya H, Choi S, Chen Y J, and the International Human Genome Sequencing Consortium (2001). Initial sequencing and analysis of the human genome. Nature, 409(6822): 860–921
-
(2001)
Nature
, vol.409
, Issue.6822
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
FitzHugh, W.10
Funke, R.11
Gage, D.12
Harris, K.13
Heaford, A.14
Howland, J.15
Kann, L.16
Lehoczky, J.17
LeVine, R.18
McEwan, P.19
McKernan, K.20
Meldrim, J.21
Mesirov, J.P.22
Miranda, C.23
Morris, W.24
Naylor, J.25
Raymond, C.26
Rosetti, M.27
Santos, R.28
Sheridan, A.29
Sougnez, C.30
Stange-Thomann, N.31
Stojanovic, N.32
Subramanian, A.33
Wyman, D.34
Rogers, J.35
Sulston, J.36
Ainscough, R.37
Beck, S.38
Bentley, D.39
Burton, J.40
Clee, C.41
Carter, N.42
Coulson, A.43
Deadman, R.44
Deloukas, P.45
Dunham, A.46
Dunham, I.47
Durbin, R.48
French, L.49
Grafham, D.50
Gregory, S.51
Hubbard, T.52
Humphray, S.53
Hunt, A.54
Jones, M.55
Lloyd, C.56
McMurray, A.57
Matthews, L.58
Mercer, S.59
Milne, S.60
Mullikin, J.C.61
Mungall, A.62
Plumb, R.63
Ross, M.64
Shownkeen, R.65
Sims, S.66
Waterston, R.H.67
Wilson, R.K.68
Hillier, L.W.69
McPherson, J.D.70
Marra, M.A.71
Mardis, E.R.72
Fulton, L.A.73
Chinwalla, A.T.74
Pepin, K.H.75
Gish, W.R.76
Chissoe, S.L.77
Wendl, M.C.78
Delehaunty, K.D.79
Miner, T.L.80
Delehaunty, A.81
Kramer, J.B.82
Cook, L.L.83
Fulton, R.S.84
Johnson, D.L.85
Minx, P.J.86
Clifton, S.W.87
Hawkins, T.88
Branscomb, E.89
Predki, P.90
Richardson, P.91
Wenning, S.92
Slezak, T.93
Doggett, N.94
Cheng, J.F.95
Olsen, A.96
Lucas, S.97
Elkin, C.98
Uberbacher, E.99
Frazier, M.100
Gibbs, R.A.101
Muzny, D.M.102
Scherer, S.E.103
Bouck, J.B.104
Sodergren, E.J.105
Worley, K.C.106
Rives, C.M.107
Gorrell, J.H.108
Metzker, M.L.109
Naylor, S.L.110
Kucherlapati, R.S.111
Nelson, D.L.112
Weinstock, G.M.113
Sakaki, Y.114
Fujiyama, A.115
Hattori, M.116
Yada, T.117
Toyoda, A.118
Itoh, T.119
Kawagoe, C.120
Watanabe, H.121
Totoki, Y.122
Taylor, T.123
Weissenbach, J.124
Heilig, R.125
Saurin, W.126
Artiguenave, F.127
Brottier, P.128
Bruls, T.129
Pelletier, E.130
Robert, C.131
Wincker, P.132
Smith, D.R.133
Doucette-Stamm, L.134
Rubenfield, M.135
Weinstock, K.136
Lee, H.M.137
Dubois, J.138
Rosenthal, A.139
Platzer, M.140
Nyakatura, G.141
Taudien, S.142
Rump, A.143
Yang, H.144
Yu, J.145
Wang, J.146
Huang, G.147
Gu, J.148
Hood, L.149
Rowen, L.150
Madan, A.151
Qin, S.152
Davis, R.W.153
Federspiel, N.A.154
Abola, A.P.155
Proctor, M.J.156
Myers, R.M.157
Schmutz, J.158
Dickson, M.159
Grimwood, J.160
Cox, D.R.161
Olson, M.V.162
Kaul, R.163
Raymond, C.164
Shimizu, N.165
Kawasaki, K.166
Minoshima, S.167
Evans, G.A.168
Athanasiou, M.169
Schultz, R.170
Roe, B.A.171
Chen, F.172
Pan, H.173
Ramser, J.174
Lehrach, H.175
Reinhardt, R.176
McCombie, W.R.177
de la Bastide, M.178
Dedhia, N.179
Blöcker, H.180
Hornischer, K.181
Nordsiek, G.182
Agarwala, R.183
Aravind, L.184
Bailey, J.A.185
Bateman, A.186
Batzoglou, S.187
Birney, E.188
Bork, P.189
Brown, D.G.190
Burge, C.B.191
Cerutti, L.192
Chen, H.C.193
Church, D.194
Clamp, M.195
Copley, R.R.196
Doerks, T.197
Eddy, S.R.198
Eichler, E.E.199
Furey, T.S.200
Galagan, J.201
Gilbert, J.G.202
Harmon, C.203
Hayashizaki, Y.204
Haussler, D.205
Hermjakob, H.206
Hokamp, K.207
Jang, W.208
Johnson, L.S.209
Jones, T.A.210
Kasif, S.211
Kaspryzk, A.212
Kennedy, S.213
Kent, W.J.214
Kitts, P.215
Koonin, E.V.216
Korf, I.217
Kulp, D.218
Lancet, D.219
Lowe, T.M.220
McLysaght, A.221
Mikkelsen, T.222
Moran, J.V.223
Mulder, N.224
Pollara, V.J.225
Ponting, C.P.226
Schuler, G.227
Schultz, J.228
Slater, G.229
Smit, A.F.230
Stupka, E.231
Szustakowski, J.232
Thierry-Mieg, D.233
Thierry-Mieg, J.234
Wagner, L.235
Wallis, J.236
Wheeler, R.237
Williams, A.238
Wolf, Y.I.239
Wolfe, K.H.240
Yang, S.P.241
Yeh, R.F.242
Collins, F.243
Guyer, M.S.244
Peterson, J.245
Felsenfeld, A.246
Wetterstrand, K.A.247
Patrinos, A.248
Morgan, M.J.249
de Jong, P.250
Catanese, J.J.251
Osoegawa, K.252
Shizuya, H.253
Choi, S.254
Chen, Y.J.255
the International Human Genome Sequencing Consortium256
more..
-
123
-
-
84896120165
-
Genetic exploration of the exit from self-renewal using haploid embryonic stem cells
-
PID: 24412312, COI: 1:CAS:528:DC%2BC2cXnsFKitw%3D%3D
-
Leeb M, Dietmann S, Paramor M, Niwa H, Smith A (2014). Genetic exploration of the exit from self-renewal using haploid embryonic stem cells. Cell Stem Cell, 14(3): 385–393
-
(2014)
Cell Stem Cell
, vol.14
, Issue.3
, pp. 385-393
-
-
Leeb, M.1
Dietmann, S.2
Paramor, M.3
Niwa, H.4
Smith, A.5
-
124
-
-
79551647673
-
Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs
-
PID: 21258322, COI: 1:CAS:528:DC%2BC3MXps1agsA%3D%3D
-
Leung A K, Young A G, Bhutkar A, Zheng G X, Bosson A D, Nielsen C B, Sharp P A (2011). Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs. Nat Struct Mol Biol, 18(2): 237–244
-
(2011)
Nat Struct Mol Biol
, vol.18
, Issue.2
, pp. 237-244
-
-
Leung, A.K.1
Young, A.G.2
Bhutkar, A.3
Zheng, G.X.4
Bosson, A.D.5
Nielsen, C.B.6
Sharp, P.A.7
-
125
-
-
77957551870
-
A mesenchymal-to-epithelial transition initiates and is required for the nuclear reprogramming of mouse fibroblasts
-
PID: 20621050, COI: 1:CAS:528:DC%2BC3cXps12ktrk%3D
-
Li R, Liang J, Ni S, Zhou T, Qing X, Li H, He W, Chen J, Li F, Zhuang Q, Qin B, Xu J, Li W, Yang J, Gan Y, Qin D, Feng S, Song H, Yang D, Zhang B, Zeng L, Lai L, Esteban M A, Pei D (2010). A mesenchymal-to-epithelial transition initiates and is required for the nuclear reprogramming of mouse fibroblasts. Cell Stem Cell, 7(1): 51–63
-
(2010)
Cell Stem Cell
, vol.7
, Issue.1
, pp. 51-63
-
-
Li, R.1
Liang, J.2
Ni, S.3
Zhou, T.4
Qing, X.5
Li, H.6
He, W.7
Chen, J.8
Li, F.9
Zhuang, Q.10
Qin, B.11
Xu, J.12
Li, W.13
Yang, J.14
Gan, Y.15
Qin, D.16
Feng, S.17
Song, H.18
Yang, D.19
Zhang, B.20
Zeng, L.21
Lai, L.22
Esteban, M.A.23
Pei, D.24
more..
-
126
-
-
84864601941
-
The histone acetyltransferase MOF is a key regulator of the embryonic stem cell core transcriptional network
-
PID: 22862943
-
Li X, Li L, Pandey R, Byun J S, Gardner K, Qin Z, Dou Y (2012). The histone acetyltransferase MOF is a key regulator of the embryonic stem cell core transcriptional network. Cell Stem Cell, 11(2): 163–178 doi:10.1016/j.stem.2012.04.023
-
(2012)
Cell Stem Cell
, vol.11
, Issue.2
, pp. 163-178
-
-
Li, X.1
Li, L.2
Pandey, R.3
Byun, J.S.4
Gardner, K.5
Qin, Z.6
Dou, Y.7
-
127
-
-
84901024510
-
Genome-wide mapping of cellular protein-RNA interactions enabled by chemical crosslinking
-
PID: 24747191, COI: 1:CAS:528:DC%2BC2cXht1Wrt73E
-
Li X, Song J, Yi C (2014). Genome-wide mapping of cellular protein-RNA interactions enabled by chemical crosslinking. Genomics Proteomics Bioinformatics, 12(2): 72–78
-
(2014)
Genomics Proteomics Bioinformatics
, vol.12
, Issue.2
, pp. 72-78
-
-
Li, X.1
Song, J.2
Yi, C.3
-
128
-
-
79960724199
-
From unwinding to clamping — the DEAD box RNA helicase family
-
PID: 21779027, COI: 1:CAS:528:DC%2BC3MXpt1aqtL4%3D
-
Linder P, Jankowsky E (2011). From unwinding to clamping — the DEAD box RNA helicase family. Nat Rev Mol Cell Biol, 12(8): 505–516
-
(2011)
Nat Rev Mol Cell Biol
, vol.12
, Issue.8
, pp. 505-516
-
-
Linder, P.1
Jankowsky, E.2
-
129
-
-
84859378635
-
Tip110 maintains expression of pluripotent factors in and pluripotency of human embryonic stem cells
-
PID: 22132941, COI: 1:CAS:528:DC%2BC38XkvV2rsb8%3D
-
Liu Y, Lee M R, Timani K, He J J, Broxmeyer H E (2012). Tip110 maintains expression of pluripotent factors in and pluripotency of human embryonic stem cells. Stem Cells Dev, 21(6): 829–833
-
(2012)
Stem Cells Dev
, vol.21
, Issue.6
, pp. 829-833
-
-
Liu, Y.1
Lee, M.R.2
Timani, K.3
He, J.J.4
Broxmeyer, H.E.5
-
130
-
-
84874088021
-
C-MYC controlled TIP110 protein expression regulates OCT4 mRNA splicing in human embryonic stem cells
-
PID: 23088399, COI: 1:CAS:528:DC%2BC3sXivVGgt74%3D
-
Liu Y, Timani K, Ou X, Broxmeyer H E, He J J (2013). C-MYC controlled TIP110 protein expression regulates OCT4 mRNA splicing in human embryonic stem cells. Stem Cells Dev, 22(5): 689–694
-
(2013)
Stem Cells Dev
, vol.22
, Issue.5
, pp. 689-694
-
-
Liu, Y.1
Timani, K.2
Ou, X.3
Broxmeyer, H.E.4
He, J.J.5
-
131
-
-
0031840978
-
Regulation of alternative polyadenylation by U1 snRNPs and SRp20
-
PID: 9710581, COI: 1:CAS:528:DyaK1cXls1Sgsbk%3D
-
Lou H, Neugebauer K M, Gagel R F, Berget S M (1998). Regulation of alternative polyadenylation by U1 snRNPs and SRp20. Mol Cell Biol, 18(9): 4977–4985
-
(1998)
Mol Cell Biol
, vol.18
, Issue.9
, pp. 4977-4985
-
-
Lou, H.1
Neugebauer, K.M.2
Gagel, R.F.3
Berget, S.M.4
-
132
-
-
84885090785
-
SON connects the splicing-regulatory network with pluripotency in human embryonic stem cells
-
PID: 24013217, COI: 1:CAS:528:DC%2BC3sXhtl2ktr3I
-
Lu X, Göke J, Sachs F, Jacques P E, Liang H, Feng B, Bourque G, Bubulya P A, Ng H H (2013). SON connects the splicing-regulatory network with pluripotency in human embryonic stem cells. Nat Cell Biol, 15(10): 1141–1152
-
(2013)
Nat Cell Biol
, vol.15
, Issue.10
, pp. 1141-1152
-
-
Lu, X.1
Göke, J.2
Sachs, F.3
Jacques, P.E.4
Liang, H.5
Feng, B.6
Bourque, G.7
Bubulya, P.A.8
Ng, H.H.9
-
133
-
-
34547441263
-
Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5′ UTR as in the 3′ UTR
-
PID: 17535905, COI: 1:CAS:528:DC%2BD2sXmsFWjsbc%3D
-
Lytle J R, Yario T A, Steitz J A (2007). Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5′ UTR as in the 3′ UTR. Proc Natl Acad Sci USA, 104(23): 9667–9672
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.23
, pp. 9667-9672
-
-
Lytle, J.R.1
Yario, T.A.2
Steitz, J.A.3
-
134
-
-
84864688599
-
DGCR8 HITS-CLIP reveals novel functions for the Microprocessor
-
PID: 22796965, COI: 1:CAS:528:DC%2BC38XhtVehtLfN
-
Macias S, Plass M, Stajuda A, Michlewski G, Eyras E, Cáceres J F (2012). DGCR8 HITS-CLIP reveals novel functions for the Microprocessor. Nat Struct Mol Biol, 19(8): 760–766
-
(2012)
Nat Struct Mol Biol
, vol.19
, Issue.8
, pp. 760-766
-
-
Macias, S.1
Plass, M.2
Stajuda, A.3
Michlewski, G.4
Eyras, E.5
Cáceres, J.F.6
-
135
-
-
0029767662
-
SR proteins and splicing control
-
PID: 8682289, COI: 1:CAS:528:DyaK28Xkt1Cks7c%3D
-
Manley J L, Tacke R (1996). SR proteins and splicing control. Genes Dev, 10(13): 1569–1579
-
(1996)
Genes Dev
, vol.10
, Issue.13
, pp. 1569-1579
-
-
Manley, J.L.1
Tacke, R.2
-
136
-
-
78751662908
-
The Polycomb complex PRC2 and its mark in life
-
PID: 21248841, COI: 1:CAS:528:DC%2BC3MXnvVOisA%3D%3D
-
Margueron R, Reinberg D (2011). The Polycomb complex PRC2 and its mark in life. Nature, 469(7330): 343–349
-
(2011)
Nature
, vol.469
, Issue.7330
, pp. 343-349
-
-
Margueron, R.1
Reinberg, D.2
-
137
-
-
18544377013
-
The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression
-
PID: 15853797, COI: 1:CAS:528:DC%2BD2MXktlCqtr8%3D
-
Maris C, Dominguez C, Allain F H (2005). The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression. FEBS J, 272(9): 2118–2131
-
(2005)
FEBS J
, vol.272
, Issue.9
, pp. 2118-2131
-
-
Maris, C.1
Dominguez, C.2
Allain, F.H.3
-
138
-
-
48449084118
-
Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells
-
PID: 18692474, COI: 1:CAS:528:DC%2BD1cXhtVSis7zO
-
Marson A, Levine S S, Cole M F, Frampton G M, Brambrink T, Johnstone S, Guenther M G, Johnston W K, Wernig M, Newman J, Calabrese JM, Dennis LM, Volkert T L, Gupta S, Love J, Hannett N, Sharp P A, Bartel D P, Jaenisch R, Young R A (2008). Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells. Cell, 134(3): 521–533
-
(2008)
Cell
, vol.134
, Issue.3
, pp. 521-533
-
-
Marson, A.1
Levine, S.S.2
Cole, M.F.3
Frampton, G.M.4
Brambrink, T.5
Johnstone, S.6
Guenther, M.G.7
Johnston, W.K.8
Wernig, M.9
Newman, J.10
Calabrese, J.M.11
Dennis, L.M.12
Volkert, T.L.13
Gupta, S.14
Love, J.15
Hannett, N.16
Sharp, P.A.17
Bartel, D.P.18
Jaenisch, R.19
Young, R.A.20
more..
-
139
-
-
0001007610
-
Isolation of a pluripotent cell line from early mouse embryos cultured in medium conditioned by teratocarcinoma stem cells
-
PID: 6950406, COI: 1:STN:280:DyaL387ltV2htg%3D%3D
-
Martin G R (1981). Isolation of a pluripotent cell line from early mouse embryos cultured in medium conditioned by teratocarcinoma stem cells. Proc Natl Acad Sci USA, 78(12): 7634–7638
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, Issue.12
, pp. 7634-7638
-
-
Martin, G.R.1
-
140
-
-
76249119007
-
Opposing microRNA families regulate self-renewal in mouse embryonic stem cells
-
PID: 20054295, COI: 1:CAS:528:DC%2BC3cXhvFCgtg%3D%3D
-
Melton C, Judson R L, Blelloch R (2010). Opposing microRNA families regulate self-renewal in mouse embryonic stem cells. Nature, 463(7281): 621–626
-
(2010)
Nature
, vol.463
, Issue.7281
, pp. 621-626
-
-
Melton, C.1
Judson, R.L.2
Blelloch, R.3
-
141
-
-
84055217976
-
Widespread generation of alternative UTRs contributes to sex-specific RNA binding by UNR
-
PID: 22101243, COI: 1:CAS:528:DC%2BC38XkvFGntQ%3D%3D
-
Mihailovic M, Wurth L, Zambelli F, Abaza I, Militti C, Mancuso F M, Roma G, Pavesi G, Gebauer F (2012). Widespread generation of alternative UTRs contributes to sex-specific RNA binding by UNR. RNA, 18(1): 53–64
-
(2012)
RNA
, vol.18
, Issue.1
, pp. 53-64
-
-
Mihailovic, M.1
Wurth, L.2
Zambelli, F.3
Abaza, I.4
Militti, C.5
Mancuso, F.M.6
Roma, G.7
Pavesi, G.8
Gebauer, F.9
-
142
-
-
0035393343
-
Genome-wide detection of alternative splicing in expressed sequences of human genes
-
PID: 11433032, COI: 1:CAS:528:DC%2BD3MXltlejs7g%3D
-
Modrek B, Resch A, Grasso C, Lee C (2001). Genome-wide detection of alternative splicing in expressed sequences of human genes. Nucleic Acids Res, 29(13): 2850–2859
-
(2001)
Nucleic Acids Res
, vol.29
, Issue.13
, pp. 2850-2859
-
-
Modrek, B.1
Resch, A.2
Grasso, C.3
Lee, C.4
-
143
-
-
84864927713
-
Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs
-
PID: 22492512, COI: 1:CAS:528:DC%2BC38XhtF2rsLjE
-
Moran V A, Perera R J, Khalil A M (2012). Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs. Nucleic Acids Res, 40(14): 6391–6400
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.14
, pp. 6391-6400
-
-
Moran, V.A.1
Perera, R.J.2
Khalil, A.M.3
-
144
-
-
34248156225
-
One Argonaute family member, Eif2c2 (Ago2), is essential for development and appears not to be involved in DNA methylation
-
PID: 17418524, COI: 1:CAS:528:DC%2BD2sXltFygtrk%3D
-
Morita S, Horii T, Kimura M, Goto Y, Ochiya T, Hatada I (2007). One Argonaute family member, Eif2c2 (Ago2), is essential for development and appears not to be involved in DNA methylation. Genomics, 89(6): 687–696
-
(2007)
Genomics
, vol.89
, Issue.6
, pp. 687-696
-
-
Morita, S.1
Horii, T.2
Kimura, M.3
Goto, Y.4
Ochiya, T.5
Hatada, I.6
-
145
-
-
84871002507
-
FUS stimulates microRNA biogenesis by facilitating co-transcriptional Drosha recruitment
-
PID: 23232809, COI: 1:CAS:528:DC%2BC38XhvVWjtbfL
-
Morlando M, Dini Modigliani S, Torrelli G, Rosa A, Di Carlo V, Caffarelli E, Bozzoni I (2012). FUS stimulates microRNA biogenesis by facilitating co-transcriptional Drosha recruitment. EMBO J, 31(24): 4502–4510
-
(2012)
EMBO J
, vol.31
, Issue.24
, pp. 4502-4510
-
-
Morlando, M.1
Dini Modigliani, S.2
Torrelli, G.3
Rosa, A.4
Di Carlo, V.5
Caffarelli, E.6
Bozzoni, I.7
-
146
-
-
84877929784
-
All’s well that ends well: alternative polyadenylation and its implications for stem cell biology
-
PID: 23357469, COI: 1:CAS:528:DC%2BC3sXhsFCqtLw%3D
-
Mueller A A, Cheung T H, Rando T A (2013). All’s well that ends well: alternative polyadenylation and its implications for stem cell biology. Curr Opin Cell Biol, 25(2): 222–232
-
(2013)
Curr Opin Cell Biol
, vol.25
, Issue.2
, pp. 222-232
-
-
Mueller, A.A.1
Cheung, T.H.2
Rando, T.A.3
-
147
-
-
24744441906
-
Characterization of Dicer-deficient murine embryonic stem cells
-
PID: 16099834, COI: 1:CAS:528:DC%2BD2MXps1yqsrk%3D
-
Murchison E P, Partridge J F, Tam O H, Cheloufi S, Hannon G J (2005). Characterization of Dicer-deficient murine embryonic stem cells. Proc Natl Acad Sci USA, 102(34): 12135–12140
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, Issue.34
, pp. 12135-12140
-
-
Murchison, E.P.1
Partridge, J.F.2
Tam, O.H.3
Cheloufi, S.4
Hannon, G.J.5
-
148
-
-
79955506825
-
Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice
-
PID: 21444682, COI: 1:CAS:528:DC%2BC3MXkslamurg%3D
-
Nakagawa S, Naganuma T, Shioi G, Hirose T (2011). Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice. J Cell Biol, 193(1): 31–39
-
(2011)
J Cell Biol
, vol.193
, Issue.1
, pp. 31-39
-
-
Nakagawa, S.1
Naganuma, T.2
Shioi, G.3
Hirose, T.4
-
149
-
-
84857498937
-
RNA-binding protein L1TD1 interacts with LIN28 via RNA and is required for human embryonic stem cell self-renewal and cancer cell proliferation
-
PID: 22162396
-
Närvä E, Rahkonen N, Emani M R, Lund R, Pursiheimo J P, Nästi J, Autio R, Rasool O, Denessiouk K, Lähdesmäki H, Rao A, Lahesmaa R (2012). RNA-binding protein L1TD1 interacts with LIN28 via RNA and is required for human embryonic stem cell self-renewal and cancer cell proliferation. Stem Cells, 30(3): 452–460
-
(2012)
Stem Cells
, vol.30
, Issue.3
, pp. 452-460
-
-
Närvä, E.1
Rahkonen, N.2
Emani, M.R.3
Lund, R.4
Pursiheimo, J.P.5
Nästi, J.6
Autio, R.7
Rasool, O.8
Denessiouk, K.9
Lähdesmäki, H.10
Rao, A.11
Lahesmaa, R.12
-
150
-
-
0036354884
-
Reversible cross-linking combined with immunoprecipitation to study RNA-protein interactions in vivo
-
PID: 12054895, COI: 1:CAS:528:DC%2BD38Xks1GhtL0%3D
-
Niranjanakumari S, Lasda E, Brazas R, Garcia-Blanco M A (2002). Reversible cross-linking combined with immunoprecipitation to study RNA-protein interactions in vivo. Methods, 26(2): 182–190
-
(2002)
Methods
, vol.26
, Issue.2
, pp. 182-190
-
-
Niranjanakumari, S.1
Lasda, E.2
Brazas, R.3
Garcia-Blanco, M.A.4
-
151
-
-
0034028901
-
Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells
-
PID: 10742100, COI: 1:CAS:528:DC%2BD3cXisVCjsbo%3D
-
Niwa H, Miyazaki J, Smith A G (2000). Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells. Nat Genet, 24(4): 372–376
-
(2000)
Nat Genet
, vol.24
, Issue.4
, pp. 372-376
-
-
Niwa, H.1
Miyazaki, J.2
Smith, A.G.3
-
152
-
-
84887016186
-
Global splicing pattern reversion during somatic cell reprogramming
-
PID: 24139801, COI: 1:CAS:528:DC%2BC3sXhs1CqsrvO
-
Ohta S, Nishida E, Yamanaka S, Yamamoto T (2013a). Global splicing pattern reversion during somatic cell reprogramming. Cell Reports, 5(2): 357–366
-
(2013)
Cell Reports
, vol.5
, Issue.2
, pp. 357-366
-
-
Ohta, S.1
Nishida, E.2
Yamanaka, S.3
Yamamoto, T.4
-
153
-
-
84887016186
-
Global splicing pattern reversion during somatic cell reprogramming
-
PID: 24139801, COI: 1:CAS:528:DC%2BC3sXhs1CqsrvO
-
Ohta S, Nishida E, Yamanaka S, Yamamoto T (2013b). Global splicing pattern reversion during somatic cell reprogramming. Cell Reports, 5(2): 357–366
-
(2013)
Cell Reports
, vol.5
, Issue.2
, pp. 357-366
-
-
Ohta, S.1
Nishida, E.2
Yamanaka, S.3
Yamamoto, T.4
-
154
-
-
0030772963
-
mRNA silencing in erythroid differentiation: hnRNP K and hnRNP E1 regulate 15-lipoxygenase translation from the 3’ end
-
PID: 9160751, COI: 1:CAS:528:DyaK2sXjsVShu70%3D
-
Ostareck D H, Ostareck-Lederer A, Wilm M, Thiele B J, Mann M, Hentze M W (1997). mRNA silencing in erythroid differentiation: hnRNP K and hnRNP E1 regulate 15-lipoxygenase translation from the 3’ end. Cell, 89: 597–606
-
(1997)
Cell
, vol.89
, pp. 597-606
-
-
Ostareck, D.H.1
Ostareck-Lederer, A.2
Wilm, M.3
Thiele, B.J.4
Mann, M.5
Hentze, M.W.6
-
155
-
-
84890478464
-
Brief report: The lincRNA Hotair is required for epithelial-tomesenchymal transition and stemness maintenance of cancer cell lines
-
PID: 24022994
-
Pádua Alves C, Fonseca A S, Muys B R, de Barros E Lima Bueno R, Bürger M C, de Souza J E, Valente V, Zago M A, Silva W A Jr (2013). Brief report: The lincRNA Hotair is required for epithelial-tomesenchymal transition and stemness maintenance of cancer cell lines. Stem Cells, 31(12): 2827–2832
-
(2013)
Stem Cells
, vol.31
, Issue.12
, pp. 2827-2832
-
-
Pádua Alves, C.1
Fonseca, A.S.2
Muys, B.R.3
de Barros, E.4
Lima Bueno, R.5
Bürger, M.C.6
de Souza, J.E.7
Valente, V.8
Zago, M.A.9
Silva, W.A.10
-
156
-
-
32044436540
-
The multifunctional RNA-binding protein La is required for mouse development and for the establishment of embryonic stem cells
-
PID: 16449655, COI: 1:CAS:528:DC%2BD28XhsFeqsbk%3D
-
Park J M, Kohn M J, Bruinsma M W, Vech C, Intine R V, Fuhrmann S, Grinberg A, Mukherjee I, Love P E, Ko M S, DePamphilis M L, Maraia R J (2006). The multifunctional RNA-binding protein La is required for mouse development and for the establishment of embryonic stem cells. Mol Cell Biol, 26(4): 1445–1451
-
(2006)
Mol Cell Biol
, vol.26
, Issue.4
, pp. 1445-1451
-
-
Park, J.M.1
Kohn, M.J.2
Bruinsma, M.W.3
Vech, C.4
Intine, R.V.5
Fuhrmann, S.6
Grinberg, A.7
Mukherjee, I.8
Love, P.E.9
Ko, M.S.10
DePamphilis, M.L.11
Maraia, R.J.12
-
157
-
-
84872863771
-
NonO binds to the CpG island of oct4 promoter and functions as a transcriptional activator of oct4 gene expression
-
PID: 23212346, COI: 1:CAS:528:DC%2BC3sXhtFyksL0%3D
-
Park Y, Lee JM, Hwang M Y, Son G H, Geum D (2013). NonO binds to the CpG island of oct4 promoter and functions as a transcriptional activator of oct4 gene expression. Mol Cells, 35(1): 61–69
-
(2013)
Mol Cells
, vol.35
, Issue.1
, pp. 61-69
-
-
Park, Y.1
Lee, J.M.2
Hwang, M.Y.3
Son, G.H.4
Geum, D.5
-
158
-
-
34248169728
-
The polycomb group protein Suz12 is required for embryonic stem cell differentiation
-
PID: 17339329, COI: 1:CAS:528:DC%2BD2sXltlant7w%3D
-
Pasini D, Bracken A P, Hansen J B, Capillo M, Helin K (2007). The polycomb group protein Suz12 is required for embryonic stem cell differentiation. Mol Cell Biol, 27(10): 3769–3779
-
(2007)
Mol Cell Biol
, vol.27
, Issue.10
, pp. 3769-3779
-
-
Pasini, D.1
Bracken, A.P.2
Hansen, J.B.3
Capillo, M.4
Helin, K.5
-
159
-
-
77949414371
-
JARID2 regulates binding of the Polycomb repressive complex 2 to target genes in ES cells
-
PID: 20075857, COI: 1:CAS:528:DC%2BC3cXjtFSms7k%3D
-
Pasini D, Cloos P A, Walfridsson J, Olsson L, Bukowski J P, Johansen J V, Bak M, Tommerup N, Rappsilber J, Helin K (2010). JARID2 regulates binding of the Polycomb repressive complex 2 to target genes in ES cells. Nature, 464(7286): 306–310
-
(2010)
Nature
, vol.464
, Issue.7286
, pp. 306-310
-
-
Pasini, D.1
Cloos, P.A.2
Walfridsson, J.3
Olsson, L.4
Bukowski, J.P.5
Johansen, J.V.6
Bak, M.7
Tommerup, N.8
Rappsilber, J.9
Helin, K.10
-
160
-
-
0010182724
-
A specific transcription factor that can bind either the 5S RNA gene or 5S RNA
-
PID: 7001457, COI: 1:CAS:528:DyaL3cXls1artLw%3D
-
Pelham H R, Brown D D (1980). A specific transcription factor that can bind either the 5S RNA gene or 5S RNA. Proc Natl Acad Sci USA, 77(7): 4170–4174
-
(1980)
Proc Natl Acad Sci USA
, vol.77
, Issue.7
, pp. 4170-4174
-
-
Pelham, H.R.1
Brown, D.D.2
-
161
-
-
72249119297
-
Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells
-
PID: 20064375
-
Peng J C, Valouev A, Swigut T, Zhang J, Zhao Y, Sidow A, Wysocka J (2009). Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells. Cell, 139(7): 1290–1302
-
(2009)
Cell
, vol.139
, Issue.7
, pp. 1290-1302
-
-
Peng, J.C.1
Valouev, A.2
Swigut, T.3
Zhang, J.4
Zhao, Y.5
Sidow, A.6
Wysocka, J.7
-
162
-
-
79953015943
-
Genome-wide studies reveal that Lin28 enhances the translation of genes important for growth and survival of human embryonic stem cells
-
PID: 21425412, COI: 1:CAS:528:DC%2BC3MXlvFKjsr0%3D
-
Peng S, Chen L L, Lei X X, Yang L, Lin H, Carmichael G G, Huang Y (2011). Genome-wide studies reveal that Lin28 enhances the translation of genes important for growth and survival of human embryonic stem cells. Stem Cells, 29(3): 496–504
-
(2011)
Stem Cells
, vol.29
, Issue.3
, pp. 496-504
-
-
Peng, S.1
Chen, L.L.2
Lei, X.X.3
Yang, L.4
Lin, H.5
Carmichael, G.G.6
Huang, Y.7
-
163
-
-
81855183636
-
Lin28A and Lin28B inhibit let-7 microRNA biogenesis by distinct mechanisms
-
PID: 22118463, COI: 1:CAS:528:DC%2BC3MXhsFeisrjP
-
Piskounova E, Polytarchou C, Thornton J E, LaPierre R J, Pothoulakis C, Hagan J P, Iliopoulos D, Gregory R I (2011). Lin28A and Lin28B inhibit let-7 microRNA biogenesis by distinct mechanisms. Cell, 147(5): 1066–1079
-
(2011)
Cell
, vol.147
, Issue.5
, pp. 1066-1079
-
-
Piskounova, E.1
Polytarchou, C.2
Thornton, J.E.3
LaPierre, R.J.4
Pothoulakis, C.5
Hagan, J.P.6
Iliopoulos, D.7
Gregory, R.I.8
-
164
-
-
26844440157
-
Regulating gene expression through RNA nuclear retention
-
PID: 16239143, COI: 1:CAS:528:DC%2BD2MXhtFOqsbbK
-
Prasanth K V, Prasanth S G, Xuan Z, Hearn S, Freier S M, Bennett C F, Zhang M Q, Spector D L (2005). Regulating gene expression through RNA nuclear retention. Cell, 123(2): 249–263
-
(2005)
Cell
, vol.123
, Issue.2
, pp. 249-263
-
-
Prasanth, K.V.1
Prasanth, S.G.2
Xuan, Z.3
Hearn, S.4
Freier, S.M.5
Bennett, C.F.6
Zhang, M.Q.7
Spector, D.L.8
-
165
-
-
26444554538
-
Diversification of stem cell molecular repertoire by alternative splicing
-
PID: 16183747, COI: 1:CAS:528:DC%2BD2MXhtFChu7fF
-
Pritsker M, Doniger T T, Kramer L C, Westcot S E, Lemischka I R (2005). Diversification of stem cell molecular repertoire by alternative splicing. Proc Natl Acad Sci USA, 102(40): 14290–14295
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, Issue.40
, pp. 14290-14295
-
-
Pritsker, M.1
Doniger, T.T.2
Kramer, L.C.3
Westcot, S.E.4
Lemischka, I.R.5
-
166
-
-
77950344768
-
Lin28-mediated posttranscriptional regulation of Oct4 expression in human embryonic stem cells
-
PID: 19966271, COI: 1:CAS:528:DC%2BC3cXis1WrsL4%3D
-
Qiu C, Ma Y, Wang J, Peng S, Huang Y (2010). Lin28-mediated posttranscriptional regulation of Oct4 expression in human embryonic stem cells. Nucleic Acids Res, 38(4): 1240–1248
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.4
, pp. 1240-1248
-
-
Qiu, C.1
Ma, Y.2
Wang, J.3
Peng, S.4
Huang, Y.5
-
167
-
-
79151471434
-
PUF proteins: repression, activation and mRNA localization
-
PID: 21115348, COI: 1:CAS:528:DC%2BC3MXhtlSmu78%3D
-
Quenault T, Lithgow T, Traven A (2011). PUF proteins: repression, activation and mRNA localization. Trends Cell Biol, 21(2): 104–112
-
(2011)
Trends Cell Biol
, vol.21
, Issue.2
, pp. 104-112
-
-
Quenault, T.1
Lithgow, T.2
Traven, A.3
-
168
-
-
84878579948
-
A defined Oct4 level governs cell state transitions of pluripotency entry and differentiation into all embryonic lineages
-
PID: 23629142, COI: 1:CAS:528:DC%2BC3sXmslajsL8%3D
-
Radzisheuskaya A, Chia G B, dos Santos R L, Theunissen TW, Castro L F, Nichols J, Silva J C (2013). A defined Oct4 level governs cell state transitions of pluripotency entry and differentiation into all embryonic lineages. Nat Cell Biol, 15(6): 579–590
-
(2013)
Nat Cell Biol
, vol.15
, Issue.6
, pp. 579-590
-
-
Radzisheuskaya, A.1
Chia, G.B.2
dos Santos, R.L.3
Theunissen, T.W.4
Castro, L.F.5
Nichols, J.6
Silva, J.C.7
-
169
-
-
84899490310
-
Do all roads lead to Oct4? the emerging concepts of induced pluripotency
-
PID: 24370212, COI: 1:CAS:528:DC%2BC3sXitVWjsLrI
-
Radzisheuskaya A, Silva J C (2014). Do all roads lead to Oct4? the emerging concepts of induced pluripotency. Trends Cell Biol, 24(5): 275–284
-
(2014)
Trends Cell Biol
, vol.24
, Issue.5
, pp. 275-284
-
-
Radzisheuskaya, A.1
Silva, J.C.2
-
170
-
-
84864379832
-
RGG motif proteins: modulators of mRNA functional states
-
PID: 22767211, COI: 1:CAS:528:DC%2BC38Xht1Oks7%2FM
-
Rajyaguru P, Parker R (2012). RGG motif proteins: modulators of mRNA functional states. Cell Cycle, 11(14): 2594–2599
-
(2012)
Cell Cycle
, vol.11
, Issue.14
, pp. 2594-2599
-
-
Rajyaguru, P.1
Parker, R.2
-
171
-
-
80052306918
-
PEST motif sequence regulating human NANOG for proteasomal degradation
-
PID: 21299413, COI: 1:CAS:528:DC%2BC3MXhtFWjs7bJ
-
Ramakrishna S, Suresh B, Lim K H, Cha B H, Lee S H, Kim K S, Baek K H (2011). PEST motif sequence regulating human NANOG for proteasomal degradation. Stem Cells Dev, 20(9): 1511–1519
-
(2011)
Stem Cells Dev
, vol.20
, Issue.9
, pp. 1511-1519
-
-
Ramakrishna, S.1
Suresh, B.2
Lim, K.H.3
Cha, B.H.4
Lee, S.H.5
Kim, K.S.6
Baek, K.H.7
-
172
-
-
78649551191
-
Differential roles of Sall4 isoforms in embryonic stem cell pluripotency
-
PID: 20837710, COI: 1:CAS:528:DC%2BC3MXisFOktg%3D%3D
-
Rao S, Zhen S, Roumiantsev S, McDonald L T, Yuan G C, Orkin S H (2010). Differential roles of Sall4 isoforms in embryonic stem cell pluripotency. Mol Cell Biol, 30(22): 5364–5380
-
(2010)
Mol Cell Biol
, vol.30
, Issue.22
, pp. 5364-5380
-
-
Rao, S.1
Zhen, S.2
Roumiantsev, S.3
McDonald, L.T.4
Yuan, G.C.5
Orkin, S.H.6
-
173
-
-
67650484984
-
Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins
-
PID: 19561594, COI: 1:CAS:528:DC%2BD1MXnslKqt78%3D
-
Ray D, Kazan H, Chan E T, Peña Castillo L, Chaudhry S, Talukder S, Blencowe B J, Morris Q, Hughes T R (2009). Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins. Nat Biotechnol, 27(7): 667–670
-
(2009)
Nat Biotechnol
, vol.27
, Issue.7
, pp. 667-670
-
-
Ray, D.1
Kazan, H.2
Chan, E.T.3
Peña Castillo, L.4
Chaudhry, S.5
Talukder, S.6
Blencowe, B.J.7
Morris, Q.8
Hughes, T.R.9
-
174
-
-
84880427394
-
A compendium of RNA-binding motifs for decoding gene regulation
-
PID: 23846655, COI: 1:CAS:528:DC%2BC3sXhtVyksbjF
-
Ray D, Kazan H, Cook K B, Weirauch M T, Najafabadi H S, Li X, Gueroussov S, Albu M, Zheng H, Yang A, Na H, Irimia M, Matzat L H, Dale R K, Smith S A, Yarosh C A, Kelly S M, Nabet B, Mecenas D, Li W, Laishram R S, Qiao M, Lipshitz H D, Piano F, Corbett A H, Carstens R P, Frey B J, Anderson R A, Lynch KW, Penalva L O, Lei E P, Fraser A G, Blencowe B J, Morris Q D, Hughes T R (2013). A compendium of RNA-binding motifs for decoding gene regulation. Nature, 499(7457): 172–177
-
(2013)
Nature
, vol.499
, Issue.7457
, pp. 172-177
-
-
Ray, D.1
Kazan, H.2
Cook, K.B.3
Weirauch, M.T.4
Najafabadi, H.S.5
Li, X.6
Gueroussov, S.7
Albu, M.8
Zheng, H.9
Yang, A.10
Na, H.11
Irimia, M.12
Matzat, L.H.13
Dale, R.K.14
Smith, S.A.15
Yarosh, C.A.16
Kelly, S.M.17
Nabet, B.18
Mecenas, D.19
Li, W.20
Laishram, R.S.21
Qiao, M.22
Lipshitz, H.D.23
Piano, F.24
Corbett, A.H.25
Carstens, R.P.26
Frey, B.J.27
Anderson, R.A.28
Lynch, K.W.29
Penalva, L.O.30
Lei, E.P.31
Fraser, A.G.32
Blencowe, B.J.33
Morris, Q.D.34
Hughes, T.R.35
more..
-
175
-
-
29644441032
-
Dazl binds in vivo to specific transcripts and can regulate the pre-meiotic translation of Mvh in germ cells
-
PID: 16278232, COI: 1:CAS:528:DC%2BD2MXhtlChsr3L
-
Reynolds N, Collier B, Maratou K, Bingham V, Speed R M, Taggart M, Semple C A, Gray N K, Cooke H J (2005). Dazl binds in vivo to specific transcripts and can regulate the pre-meiotic translation of Mvh in germ cells. Hum Mol Genet, 14(24): 3899–3909
-
(2005)
Hum Mol Genet
, vol.14
, Issue.24
, pp. 3899-3909
-
-
Reynolds, N.1
Collier, B.2
Maratou, K.3
Bingham, V.4
Speed, R.M.5
Taggart, M.6
Semple, C.A.7
Gray, N.K.8
Cooke, H.J.9
-
176
-
-
34250729138
-
Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs
-
PID: 17604720, COI: 1:CAS:528:DC%2BD2sXotV2hsL4%3D
-
Rinn J L, Kertesz M, Wang J K, Squazzo S L, Xu X, Brugmann S A, Goodnough L H, Helms J A, Farnham P J, Segal E, Chang H Y(2007). Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs. Cell, 129(7): 1311–1323
-
(2007)
Cell
, vol.129
, Issue.7
, pp. 1311-1323
-
-
Rinn, J.L.1
Kertesz, M.2
Wang, J.K.3
Squazzo, S.L.4
Xu, X.5
Brugmann, S.A.6
Goodnough, L.H.7
Helms, J.A.8
Farnham, P.J.9
Segal, E.10
Chang, H.Y.11
-
177
-
-
73449125132
-
Alternative splicing in the differentiation of human embryonic stem cells into cardiac precursors
-
PID: 19893621
-
Salomonis N, Nelson B, Vranizan K, Pico A R, Hanspers K, Kuchinsky A, Ta L, Mercola M, Conklin B R (2009). Alternative splicing in the differentiation of human embryonic stem cells into cardiac precursors. PLOS Comput Biol, 5(11): e1000553
-
(2009)
PLOS Comput Biol
, vol.5
, Issue.11
, pp. e1000553
-
-
Salomonis, N.1
Nelson, B.2
Vranizan, K.3
Pico, A.R.4
Hanspers, K.5
Kuchinsky, A.6
Ta, L.7
Mercola, M.8
Conklin, B.R.9
-
178
-
-
77953764202
-
Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation
-
PID: 20498046, COI: 1:CAS:528:DC%2BC3cXnvV2isbs%3D
-
Salomonis N, Schlieve C R, Pereira L, Wahlquist C, Colas A, Zambon A C, Vranizan K, Spindler M J, Pico A R, Cline M S, Clark T A, Williams A, Blume J E, Samal E, Mercola M, Merrill B J, Conklin B R (2010). Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation. Proc Natl Acad Sci USA, 107(23): 10514–10519
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.23
, pp. 10514-10519
-
-
Salomonis, N.1
Schlieve, C.R.2
Pereira, L.3
Wahlquist, C.4
Colas, A.5
Zambon, A.C.6
Vranizan, K.7
Spindler, M.J.8
Pico, A.R.9
Cline, M.S.10
Clark, T.A.11
Williams, A.12
Blume, J.E.13
Samal, E.14
Mercola, M.15
Merrill, B.J.16
Conklin, B.R.17
-
179
-
-
77956320116
-
Functional genomics reveals a BMP-driven mesenchymal-to-epithelial transition in the initiation of somatic cell reprogramming
-
PID: 20621051, COI: 1:CAS:528:DC%2BC3cXps12ktrY%3D
-
Samavarchi-Tehrani P, Golipour A, David L, Sung H K, Beyer T A, Datti A, Woltjen K, Nagy A, Wrana J L (2010). Functional genomics reveals a BMP-driven mesenchymal-to-epithelial transition in the initiation of somatic cell reprogramming. Cell Stem Cell, 7(1): 64–77
-
(2010)
Cell Stem Cell
, vol.7
, Issue.1
, pp. 64-77
-
-
Samavarchi-Tehrani, P.1
Golipour, A.2
David, L.3
Sung, H.K.4
Beyer, T.A.5
Datti, A.6
Woltjen, K.7
Nagy, A.8
Wrana, J.L.9
-
180
-
-
46249092601
-
Proliferating cells express mRNAs with shortened 3′ untranslated regions and fewer microRNA target sites
-
PID: 18566288, COI: 1:CAS:528:DC%2BD1cXnt1Oju70%3D
-
Sandberg R, Neilson J R, Sarma A, Sharp P A, Burge C B (2008). Proliferating cells express mRNAs with shortened 3′ untranslated regions and fewer microRNA target sites. Science, 320(5883): 1643–1647
-
(2008)
Science
, vol.320
, Issue.5883
, pp. 1643-1647
-
-
Sandberg, R.1
Neilson, J.R.2
Sarma, A.3
Sharp, P.A.4
Burge, C.B.5
-
181
-
-
84879898108
-
Concise review: pursuing self-renewal and pluripotency with the stem cell factor Nanog
-
PID: 23653415, COI: 1:CAS:528:DC%2BC3sXhtlWjsL%2FP
-
Saunders A, Faiola F, Wang J (2013). Concise review: pursuing self-renewal and pluripotency with the stem cell factor Nanog. Stem Cells, 31(7): 1227–1236
-
(2013)
Stem Cells
, vol.31
, Issue.7
, pp. 1227-1236
-
-
Saunders, A.1
Faiola, F.2
Wang, J.3
-
182
-
-
84899707594
-
Export and expression: mRNAs deliver new messages for controlling pluripotency
-
PID: 24792108, COI: 1:CAS:528:DC%2BC2cXnsFChtLc%3D
-
Saunders A, Wang J (2014). Export and expression: mRNAs deliver new messages for controlling pluripotency. Cell Stem Cell, 14(5): 549–550
-
(2014)
Cell Stem Cell
, vol.14
, Issue.5
, pp. 549-550
-
-
Saunders, A.1
Wang, J.2
-
183
-
-
28444475503
-
Reciprocal expression of lin-41 and the microRNAs let-7 and mir-125 during mouse embryogenesis
-
PID: 16247770, COI: 1:CAS:528:DC%2BD2MXhtlCisrnK
-
Schulman B R, Esquela-Kerscher A, Slack F J (2005). Reciprocal expression of lin-41 and the microRNAs let-7 and mir-125 during mouse embryogenesis. Dev Dyn, 234(4): 1046–1054
-
(2005)
Dev Dyn
, vol.234
, Issue.4
, pp. 1046-1054
-
-
Schulman, B.R.1
Esquela-Kerscher, A.2
Slack, F.J.3
-
184
-
-
84877818467
-
Role and control of X chromosome dosage in mammalian development
-
PID: 23465885, COI: 1:CAS:528:DC%2BC3sXjsFertLk%3D
-
Schulz E G, Heard E (2013). Role and control of X chromosome dosage in mammalian development. Curr Opin Genet Dev, 23(2): 109–115
-
(2013)
Curr Opin Genet Dev
, vol.23
, Issue.2
, pp. 109-115
-
-
Schulz, E.G.1
Heard, E.2
-
185
-
-
84893797933
-
The two active X chromosomes in female ESCs block exit from the pluripotent state by modulating the ESC signaling network
-
PID: 24506884, COI: 1:CAS:528:DC%2BC2cXitVyktro%3D
-
Schulz E G, Meisig J, Nakamura T, Okamoto I, Sieber A, Picard C, Borensztein M, Saitou M, Blüthgen N, Heard E (2014). The two active X chromosomes in female ESCs block exit from the pluripotent state by modulating the ESC signaling network. Cell Stem Cell, 14(2): 203–216
-
(2014)
Cell Stem Cell
, vol.14
, Issue.2
, pp. 203-216
-
-
Schulz, E.G.1
Meisig, J.2
Nakamura, T.3
Okamoto, I.4
Sieber, A.5
Picard, C.6
Borensztein, M.7
Saitou, M.8
Blüthgen, N.9
Heard, E.10
-
186
-
-
75149163987
-
Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells
-
Sheik Mohamed J, Gaughwin P M, Lim B, Robson P, Lipovich L (2010). Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells. RNA New York, NY 16, 324–337
-
(2010)
RNA (New York, NY
, vol.16
, pp. 324-337
-
-
Sheik Mohamed, J.1
Gaughwin, P.M.2
Lim, B.3
Robson, P.4
Lipovich, L.5
-
187
-
-
80055012845
-
Argonaute-2-null embryonic stem cells are retarded in self-renewal and differentiation
-
PID: 21857111, COI: 1:CAS:528:DC%2BC3MXht1Giu7vL
-
Shekar P C, Naim A, Sarathi D P, Kumar S (2011). Argonaute-2-null embryonic stem cells are retarded in self-renewal and differentiation. J Biosci, 36(4): 649–657
-
(2011)
J Biosci
, vol.36
, Issue.4
, pp. 649-657
-
-
Shekar, P.C.1
Naim, A.2
Sarathi, D.P.3
Kumar, S.4
-
188
-
-
72249104107
-
Jumonji modulates polycomb activity and self-renewal versus differentiation of stem cells
-
PID: 20064376
-
Shen X, Kim W, Fujiwara Y, Simon M D, Liu Y, Mysliwiec M R, Yuan G C, Lee Y, Orkin S H (2009). Jumonji modulates polycomb activity and self-renewal versus differentiation of stem cells. Cell, 139(7): 1303–1314
-
(2009)
Cell
, vol.139
, Issue.7
, pp. 1303-1314
-
-
Shen, X.1
Kim, W.2
Fujiwara, Y.3
Simon, M.D.4
Liu, Y.5
Mysliwiec, M.R.6
Yuan, G.C.7
Lee, Y.8
Orkin, S.H.9
-
189
-
-
79953014914
-
Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq
-
PID: 21343387, COI: 1:CAS:528:DC%2BC3MXkslSnsr0%3D
-
Shepard P J, Choi E A, Lu J, Flanagan L A, Hertel K J, Shi Y (2011). Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq. RNA, 17(4): 761–772
-
(2011)
RNA
, vol.17
, Issue.4
, pp. 761-772
-
-
Shepard, P.J.1
Choi, E.A.2
Lu, J.3
Flanagan, L.A.4
Hertel, K.J.5
Shi, Y.6
-
190
-
-
70350437430
-
Polypyrimidine tract-binding protein is essential for early mouse development and embryonic stem cell proliferation
-
PID: 19843185, COI: 1:CAS:528:DC%2BD1MXhsVSmsLrF
-
Shibayama M, Ohno S, Osaka T, Sakamoto R, Tokunaga A, Nakatake Y, Sato M, Yoshida N (2009). Polypyrimidine tract-binding protein is essential for early mouse development and embryonic stem cell proliferation. FEBS J, 276(22): 6658–6668
-
(2009)
FEBS J
, vol.276
, Issue.22
, pp. 6658-6668
-
-
Shibayama, M.1
Ohno, S.2
Osaka, T.3
Sakamoto, R.4
Tokunaga, A.5
Nakatake, Y.6
Sato, M.7
Yoshida, N.8
-
191
-
-
79551690559
-
Recognition of 2′-O-methylated 3′-end of piRNA by the PAZ domain of a Piwi protein
-
PID: 21237665, COI: 1:CAS:528:DC%2BC3MXhsFyit7w%3D
-
Simon B, Kirkpatrick J P, Eckhardt S, Reuter M, Rocha E A, Andrade-Navarro M A, Sehr P, Pillai R S, Carlomagno T (2011). Recognition of 2′-O-methylated 3′-end of piRNA by the PAZ domain of a Piwi protein. Structure, 19(2): 172–180
-
(2011)
Structure
, vol.19
, Issue.2
, pp. 172-180
-
-
Simon, B.1
Kirkpatrick, J.P.2
Eckhardt, S.3
Reuter, M.4
Rocha, E.A.5
Andrade-Navarro, M.A.6
Sehr, P.7
Pillai, R.S.8
Carlomagno, T.9
-
192
-
-
84894247159
-
RIPiT-Seq: a high-throughput approach for footprinting RNA:protein complexes
-
PID: 24096052, COI: 1:CAS:528:DC%2BC3sXhs1CqtL3I
-
Singh G, Ricci E P, Moore M J (2014). RIPiT-Seq: a high-throughput approach for footprinting RNA:protein complexes. Methods, 65(3): 320–332
-
(2014)
Methods
, vol.65
, Issue.3
, pp. 320-332
-
-
Singh, G.1
Ricci, E.P.2
Moore, M.J.3
-
193
-
-
40949130398
-
MicroRNAs control de novo DNA methylation through regulation of transcriptional repressors in mouse embryonic stem cells
-
PID: 18311153, COI: 1:CAS:528:DC%2BD1cXislKmtbk%3D
-
Sinkkonen L, Hugenschmidt T, Berninger P, Gaidatzis D, Mohn F, Artus-Revel C G, Zavolan M, Svoboda P, Filipowicz W (2008). MicroRNAs control de novo DNA methylation through regulation of transcriptional repressors in mouse embryonic stem cells. Nat Struct Mol Biol, 15(3): 259–267
-
(2008)
Nat Struct Mol Biol
, vol.15
, Issue.3
, pp. 259-267
-
-
Sinkkonen, L.1
Hugenschmidt, T.2
Berninger, P.3
Gaidatzis, D.4
Mohn, F.5
Artus-Revel, C.G.6
Zavolan, M.7
Svoboda, P.8
Filipowicz, W.9
-
194
-
-
78649637489
-
Highly ordered spatial organization of the structural long noncoding NEAT1 RNAs within paraspeckle nuclear bodies
-
PID: 20881053, COI: 1:CAS:528:DC%2BC3cXhsFagsrfK
-
Souquere S, Beauclair G, Harper F, Fox A, Pierron G (2010). Highly ordered spatial organization of the structural long noncoding NEAT1 RNAs within paraspeckle nuclear bodies. Mol Biol Cell, 21(22): 4020–4027
-
(2010)
Mol Biol Cell
, vol.21
, Issue.22
, pp. 4020-4027
-
-
Souquere, S.1
Beauclair, G.2
Harper, F.3
Fox, A.4
Pierron, G.5
-
195
-
-
17844404891
-
RNA sequence- and shape-dependent recognition by proteins in the ribonucleoprotein particle
-
PID: 15643449, COI: 1:CAS:528:DC%2BD2MXitVeqtQ%3D%3D
-
Stefl R, Skrisovska L, Allain F H (2005). RNA sequence- and shape-dependent recognition by proteins in the ribonucleoprotein particle. EMBO Rep, 6(1): 33–38
-
(2005)
EMBO Rep
, vol.6
, Issue.1
, pp. 33-38
-
-
Stefl, R.1
Skrisovska, L.2
Allain, F.H.3
-
196
-
-
65349181366
-
Screening for novel regulators of embryonic stem cell identity
-
PID: 19427287, COI: 1:CAS:528:DC%2BD1MXlvVGjtL4%3D
-
Subramanian V, Klattenhoff C A, Boyer L A (2009). Screening for novel regulators of embryonic stem cell identity. Cell Stem Cell, 4(5): 377–378
-
(2009)
Cell Stem Cell
, vol.4
, Issue.5
, pp. 377-378
-
-
Subramanian, V.1
Klattenhoff, C.A.2
Boyer, L.A.3
-
197
-
-
33645760966
-
Unusual intron conservation near tissue-regulated exons found by splicing microarrays
-
PID: 16424921
-
Sugnet C W, Srinivasan K, Clark T A, O’Brien G, Cline M S, Wang H, Williams A, Kulp D, Blume J E, Haussler D, Ares M Jr (2006). Unusual intron conservation near tissue-regulated exons found by splicing microarrays. PLOS Comput Biol, 2(1): e4
-
(2006)
PLOS Comput Biol
, vol.2
, Issue.1
, pp. e4
-
-
Sugnet, C.W.1
Srinivasan, K.2
Clark, T.A.3
O’Brien, G.4
Cline, M.S.5
Wang, H.6
Williams, A.7
Kulp, D.8
Blume, J.E.9
Haussler, D.10
Ares, M.11
-
198
-
-
61849113891
-
MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles
-
PID: 19106332, COI: 1:CAS:528:DC%2BD1MXjt12ktbs%3D
-
Sunwoo H, Dinger M E, Wilusz J E, Amaral P P, Mattick J S, Spector D L (2009). MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles. Genome Res, 19(3): 347–359
-
(2009)
Genome Res
, vol.19
, Issue.3
, pp. 347-359
-
-
Sunwoo, H.1
Dinger, M.E.2
Wilusz, J.E.3
Amaral, P.P.4
Mattick, J.S.5
Spector, D.L.6
-
199
-
-
57449111124
-
Transcriptional heterogeneity in mouse embryonic stem cells
-
PID: 19152747, COI: 1:CAS:528:DC%2BD1MXislGgtLc%3D
-
Tanaka T S (2009). Transcriptional heterogeneity in mouse embryonic stem cells. Reprod Fertil Dev, 21(1): 67–75
-
(2009)
Reprod Fertil Dev
, vol.21
, Issue.1
, pp. 67-75
-
-
Tanaka, T.S.1
-
200
-
-
54549108798
-
MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation
-
PID: 18806776, COI: 1:CAS:528:DC%2BD1cXht1yju7jO
-
Tay Y, Zhang J, Thomson A M, Lim B, Rigoutsos I (2008). MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation. Nature, 455(7216): 1124–1128
-
(2008)
Nature
, vol.455
, Issue.7216
, pp. 1124-1128
-
-
Tay, Y.1
Zhang, J.2
Thomson, A.M.3
Lim, B.4
Rigoutsos, I.5
-
201
-
-
57149097433
-
Structural insights into RNA recognition by the alternative-splicing regulator muscleblind-like MBNL1
-
PID: 19043415, COI: 1:CAS:528:DC%2BD1cXhsVenu7zO
-
Teplova M, Patel D J (2008). Structural insights into RNA recognition by the alternative-splicing regulator muscleblind-like MBNL1. Nat Struct Mol Biol, 15(12): 1343–1351
-
(2008)
Nat Struct Mol Biol
, vol.15
, Issue.12
, pp. 1343-1351
-
-
Teplova, M.1
Patel, D.J.2
-
202
-
-
0032491416
-
Embryonic stem cell lines derived from human blastocysts
-
PID: 9804556, COI: 1:CAS:528:DyaK1cXntleisLg%3D
-
Thomson J A, Itskovitz-Eldor J, Shapiro S S, Waknitz M A, Swiergiel J J, Marshall V S, Jones JM (1998). Embryonic stem cell lines derived from human blastocysts. Science, 282(5391): 1145–1147
-
(1998)
Science
, vol.282
, Issue.5391
, pp. 1145-1147
-
-
Thomson, J.A.1
Itskovitz-Eldor, J.2
Shapiro, S.S.3
Waknitz, M.A.4
Swiergiel, J.J.5
Marshall, V.S.6
Jones, J.M.7
-
203
-
-
84866597456
-
Lin28-mediated control of let-7 microRNA expression by alternative TUTases Zcchc11 (TUT4) and Zcchc6 (TUT7)
-
PID: 22898984, COI: 1:CAS:528:DC%2BC38XhsVent7vP
-
Thornton J E, Chang H M, Piskounova E, Gregory R I (2012). Lin28-mediated control of let-7 microRNA expression by alternative TUTases Zcchc11 (TUT4) and Zcchc6 (TUT7). RNA, 18(10): 1875–1885
-
(2012)
RNA
, vol.18
, Issue.10
, pp. 1875-1885
-
-
Thornton, J.E.1
Chang, H.M.2
Piskounova, E.3
Gregory, R.I.4
-
204
-
-
84878151459
-
Alternative cleavage and polyadenylation: the long and short of it
-
PID: 23632313, COI: 1:CAS:528:DC%2BC3sXmvVWgs70%3D
-
Tian B, Manley J L (2013). Alternative cleavage and polyadenylation: the long and short of it. Trends Biochem Sci, 38(6): 312–320
-
(2013)
Trends Biochem Sci
, vol.38
, Issue.6
, pp. 312-320
-
-
Tian, B.1
Manley, J.L.2
-
205
-
-
79551634514
-
Structural basis for piRNA 2′-O-methylated 3′-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains
-
PID: 21193640, COI: 1:CAS:528:DC%2BC3MXhtlersLc%3D
-
Tian Y, Simanshu D K, Ma J B, Patel D J (2011). Structural basis for piRNA 2′-O-methylated 3′-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains. Proc Natl Acad Sci USA, 108(3): 903–910
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, Issue.3
, pp. 903-910
-
-
Tian, Y.1
Simanshu, D.K.2
Ma, J.B.3
Patel, D.J.4
-
206
-
-
78650223089
-
MicroRNAs in embryonic stem cell function and fate
-
PID: 21159814, COI: 1:CAS:528:DC%2BC3MXltVGl
-
Tiscornia G, Izpisúa Belmonte J C (2010). MicroRNAs in embryonic stem cell function and fate. Genes Dev, 24(24): 2732–2741
-
(2010)
Genes Dev
, vol.24
, Issue.24
, pp. 2732-2741
-
-
Tiscornia, G.1
Izpisúa Belmonte, J.C.2
-
207
-
-
42149192008
-
Identification and characterization of subpopulations in undifferentiated ES cell culture
-
PID: 18263842, COI: 1:CAS:528:DC%2BD1cXkvVWjsb4%3D
-
Toyooka Y, Shimosato D, Murakami K, Takahashi K, Niwa H (2008). Identification and characterization of subpopulations in undifferentiated ES cell culture. Development, 135(5): 909–918
-
(2008)
Development
, vol.135
, Issue.5
, pp. 909-918
-
-
Toyooka, Y.1
Shimosato, D.2
Murakami, K.3
Takahashi, K.4
Niwa, H.5
-
208
-
-
77954572735
-
Long noncoding RNA as modular scaffold of histone modification complexes
-
PID: 20616235, COI: 1:CAS:528:DC%2BC3cXps1ehtb0%3D
-
Tsai M C, Manor O, Wan Y, Mosammaparast N, Wang J K, Lan F, Shi Y, Segal E, Chang H Y (2010). Long noncoding RNA as modular scaffold of histone modification complexes. Science, 329(5992): 689–693
-
(2010)
Science
, vol.329
, Issue.5992
, pp. 689-693
-
-
Tsai, M.C.1
Manor, O.2
Wan, Y.3
Mosammaparast, N.4
Wang, J.K.5
Lan, F.6
Shi, Y.7
Segal, E.8
Chang, H.Y.9
-
209
-
-
84902664358
-
Induced overexpression of OCT4A in human embryonic stem cells increases cloning efficiency
-
PID: 24627557, COI: 1:CAS:528:DC%2BC2cXhtFaltbjL
-
Tsai S C, Chang D F, Hong C M, Xia P, Senadheera D, Trump L, Mishra S, Lutzko C (2014). Induced overexpression of OCT4A in human embryonic stem cells increases cloning efficiency. Am J Physiol Cell Physiol, 306(12): C1108–C1118
-
(2014)
Am J Physiol Cell Physiol
, vol.306
, Issue.12
, pp. C1108-C1118
-
-
Tsai, S.C.1
Chang, D.F.2
Hong, C.M.3
Xia, P.4
Senadheera, D.5
Trump, L.6
Mishra, S.7
Lutzko, C.8
-
210
-
-
0034127295
-
Association of the mouse infertility factor DAZL1 with actively translating polyribosomes
-
PID: 10819768, COI: 1:CAS:528:DC%2BD3cXjsF2hsLs%3D
-
Tsui S, Dai T, Warren S T, Salido E C, Yen P H (2000). Association of the mouse infertility factor DAZL1 with actively translating polyribosomes. Biol Reprod, 62(6): 1655–1660
-
(2000)
Biol Reprod
, vol.62
, Issue.6
, pp. 1655-1660
-
-
Tsui, S.1
Dai, T.2
Warren, S.T.3
Salido, E.C.4
Yen, P.H.5
-
211
-
-
27944508215
-
CLIP: a method for identifying protein-RNA interaction sites in living cells
-
PID: 16314267, COI: 1:CAS:528:DC%2BD2MXht1OnurrK
-
Ule J, Jensen K, Mele A, Darnell R B (2005). CLIP: a method for identifying protein-RNA interaction sites in living cells. Methods, 37(4): 376–386
-
(2005)
Methods
, vol.37
, Issue.4
, pp. 376-386
-
-
Ule, J.1
Jensen, K.2
Mele, A.3
Darnell, R.B.4
-
212
-
-
0242497663
-
CLIP identifies Nova-regulated RNA networks in the brain
-
PID: 14615540, COI: 1:CAS:528:DC%2BD3sXpt1Smtr0%3D
-
Ule J, Jensen K B, Ruggiu M, Mele A, Ule A, Darnell R B (2003). CLIP identifies Nova-regulated RNA networks in the brain. Science, 302(5648): 1212–1215
-
(2003)
Science
, vol.302
, Issue.5648
, pp. 1212-1215
-
-
Ule, J.1
Jensen, K.B.2
Ruggiu, M.3
Mele, A.4
Ule, A.5
Darnell, R.B.6
-
213
-
-
27644455141
-
Homologues of the Caenorhabditis elegans Fox-1 protein are neuronal splicing regulators in mammals
-
PID: 16260614, COI: 1:CAS:528:DC%2BD2MXht1altrjE
-
Underwood J G, Boutz P L, Dougherty J D, Stoilov P, Black D L (2005). Homologues of the Caenorhabditis elegans Fox-1 protein are neuronal splicing regulators in mammals. Mol Cell Biol, 25(22): 10005–10016
-
(2005)
Mol Cell Biol
, vol.25
, Issue.22
, pp. 10005-10016
-
-
Underwood, J.G.1
Boutz, P.L.2
Dougherty, J.D.3
Stoilov, P.4
Black, D.L.5
-
214
-
-
23944466443
-
ADAR gene family and A-to-I RNA editing: diverse roles in posttranscriptional gene regulation
-
PID: 16096031, COI: 1:CAS:528:DC%2BD1cXitlKjtrw%3D
-
Valente L, Nishikura K (2005). ADAR gene family and A-to-I RNA editing: diverse roles in posttranscriptional gene regulation. Prog Nucleic Acid Res Mol Biol, 79: 299–338
-
(2005)
Prog Nucleic Acid Res Mol Biol
, vol.79
, pp. 299-338
-
-
Valente, L.1
Nishikura, K.2
-
215
-
-
43549124851
-
Structure and function of KH domains
-
PID: 18422648, COI: 1:CAS:528:DC%2BD1cXnt1yitL8%3D
-
Valverde R, Edwards L, Regan L (2008). Structure and function of KH domains. FEBS J, 275(11): 2712–2726
-
(2008)
FEBS J
, vol.275
, Issue.11
, pp. 2712-2726
-
-
Valverde, R.1
Edwards, L.2
Regan, L.3
-
216
-
-
84871857826
-
RBFOX2 is an important regulator of mesenchymal tissue-specific splicing in both normal and cancer tissues
-
PID: 23149937, COI: 1:CAS:528:DC%2BC3sXlt1Skurk%3D
-
Venables J P, Brosseau J P, Gadea G, Klinck R, Prinos P, Beaulieu J F, Lapointe E, Durand M, Thibault P, Tremblay K, Rousset F, Tazi J, Abou Elela S, Chabot B (2013a). RBFOX2 is an important regulator of mesenchymal tissue-specific splicing in both normal and cancer tissues. Mol Cell Biol, 33(2): 396–405
-
(2013)
Mol Cell Biol
, vol.33
, Issue.2
, pp. 396-405
-
-
Venables, J.P.1
Brosseau, J.P.2
Gadea, G.3
Klinck, R.4
Prinos, P.5
Beaulieu, J.F.6
Lapointe, E.7
Durand, M.8
Thibault, P.9
Tremblay, K.10
Rousset, F.11
Tazi, J.12
Abou Elela, S.13
Chabot, B.14
-
217
-
-
84899044116
-
MBNL1 and RBFOX2 cooperate to establish a splicing programme involved in pluripotent stem cell differentiation
-
PID: 24048253
-
Venables J P, Lapasset L, Gadea G, Fort P, Klinck R, Irimia M, Vignal E, Thibault P, Prinos P, Chabot B, Abou Elela S, Roux P, Lemaitre J M, Tazi J (2013b). MBNL1 and RBFOX2 cooperate to establish a splicing programme involved in pluripotent stem cell differentiation. Nat Commun, 4: 2480
-
(2013)
Nat Commun
, vol.4
, pp. 2480
-
-
Venables, J.P.1
Lapasset, L.2
Gadea, G.3
Fort, P.4
Klinck, R.5
Irimia, M.6
Vignal, E.7
Thibault, P.8
Prinos, P.9
Chabot, B.10
Abou Elela, S.11
Roux, P.12
Lemaitre, J.M.13
Tazi, J.14
-
218
-
-
0035895505
-
The sequence of the human genome
-
PID: 11181995, COI: 1:CAS:528:DC%2BD3MXhtlSgsbo%3D
-
Venter J C, Adams M D, Myers E W, Li P W, Mural R J, Sutton G G, Smith H O, Yandell M, Evans C A, Holt R A, Gocayne J D, Amanatides P, Ballew R M, Huson D H, Wortman J R, Zhang Q, Kodira C D, Zheng X H, Chen L, Skupski M, Subramanian G, Thomas P D, Zhang J, Gabor Miklos G L, Nelson C, Broder S, Clark A G, Nadeau J, McKusick V A, Zinder N, Levine A J, Roberts R J, Simon M, Slayman C, Hunkapiller M, Bolanos R, Delcher A, Dew I, Fasulo D, Flanigan M, Florea L, Halpern A, Hannenhalli S, Kravitz S, Levy S, Mobarry C, Reinert K, Remington K, Abu-Threideh J, Beasley E, Biddick K, Bonazzi V, Brandon R, Cargill M, Chandramouliswaran I, Charlab R, Chaturvedi K, Deng Z, Di Francesco V, Dunn P, Eilbeck K, Evangelista C, Gabrielian A E, Gan W, Ge W, Gong F, Gu Z, Guan P, Heiman T J, Higgins M E, Ji R R, Ke Z, Ketchum K A, Lai Z, Lei Y, Li Z, Li J, Liang Y, Lin X, Lu F, Merkulov G V, Milshina N, Moore H M, Naik A K, Narayan V A, Neelam B, Nusskern D, Rusch D B, Salzberg S, Shao W, Shue B, Sun J, Wang Z, Wang A, Wang X, Wang J, Wei M, Wides R, Xiao C, Yan C, Yao A, Ye J, Zhan M, Zhang W, Zhang H, Zhao Q, Zheng L, Zhong F, Zhong W, Zhu S, Zhao S, Gilbert D, Baumhueter S, Spier G, Carter C, Cravchik A, Woodage T, Ali F, An H, Awe A, Baldwin D, Baden H, Barnstead M, Barrow I, Beeson K, Busam D, Carver A, Center A, Cheng M L, Curry L, Danaher S, Davenport L, Desilets R, Dietz S, Dodson K, Doup L, Ferriera S, Garg N, Gluecksmann A, Hart B, Haynes J, Haynes C, Heiner C, Hladun S, Hostin D, Houck J, Howland T, Ibegwam C, Johnson J, Kalush F, Kline L, Koduru S, Love A, Mann F, May D, McCawley S, McIntosh T, McMullen I, Moy M, Moy L, Murphy B, Nelson K, Pfannkoch C, Pratts E, Puri V, Qureshi H, Reardon M, Rodriguez R, Rogers Y H, Romblad D, Ruhfel B, Scott R, Sitter C, Smallwood M, Stewart E, Strong R, Suh E, Thomas R, Tint N N, Tse S, Vech C, Wang G, Wetter J, Williams S, Williams M, Windsor S, Winn-Deen E, Wolfe K, Zaveri J, Zaveri K, Abril J F, Guigó R, Campbell M J, Sjolander K V, Karlak B, Kejariwal A, Mi H, Lazareva B, Hatton T, Narechania A, Diemer K, Muruganujan A, Guo N, Sato S, Bafna V, Istrail S, Lippert R, Schwartz R, Walenz B, Yooseph S, Allen D, Basu A, Baxendale J, Blick L, Caminha M, Carnes-Stine J, Caulk P, Chiang Y H, Coyne M, Dahlke C, Mays A, Dombroski M, Donnelly M, Ely D, Esparham S, Fosler C, Gire H, Glanowski S, Glasser K, Glodek A, Gorokhov M, Graham K, Gropman B, Harris M, Heil J, Henderson S, Hoover J, Jennings D, Jordan C, Jordan J, Kasha J, Kagan L, Kraft C, Levitsky A, Lewis M, Liu X, Lopez J, Ma D, Majoros W, McDaniel J, Murphy S, Newman M, Nguyen T, Nguyen N, Nodell M, Pan S, Peck J, Peterson M, Rowe W, Sanders R, Scott J, Simpson M, Smith T, Sprague A, Stockwell T, Turner R, Venter E, Wang M, Wen M, Wu D, Wu M, Xia A, Zandieh A, Zhu X (2001). The sequence of the human genome. Science, 291(5507): 1304–1351
-
(2001)
Science
, vol.291
, Issue.5507
, pp. 1304-1351
-
-
Venter, J.C.1
Adams, M.D.2
Myers, E.W.3
Li, P.W.4
Mural, R.J.5
Sutton, G.G.6
Smith, H.O.7
Yandell, M.8
Evans, C.A.9
Holt, R.A.10
Gocayne, J.D.11
Amanatides, P.12
Ballew, R.M.13
Huson, D.H.14
Wortman, J.R.15
Zhang, Q.16
Kodira, C.D.17
Zheng, X.H.18
Chen, L.19
Skupski, M.20
Subramanian, G.21
Thomas, P.D.22
Zhang, J.23
Gabor Miklos, G.L.24
Nelson, C.25
Broder, S.26
Clark, A.G.27
Nadeau, J.28
McKusick, V.A.29
Zinder, N.30
Levine, A.J.31
Roberts, R.J.32
Simon, M.33
Slayman, C.34
Hunkapiller, M.35
Bolanos, R.36
Delcher, A.37
Dew, I.38
Fasulo, D.39
Flanigan, M.40
Florea, L.41
Halpern, A.42
Hannenhalli, S.43
Kravitz, S.44
Levy, S.45
Mobarry, C.46
Reinert, K.47
Remington, K.48
Abu-Threideh, J.49
Beasley, E.50
Biddick, K.51
Bonazzi, V.52
Brandon, R.53
Cargill, M.54
Chandramouliswaran, I.55
Charlab, R.56
Chaturvedi, K.57
Deng, Z.58
Di Francesco, V.59
Dunn, P.60
Eilbeck, K.61
Evangelista, C.62
Gabrielian, A.E.63
Gan, W.64
Ge, W.65
Gong, F.66
Gu, Z.67
Guan, P.68
Heiman, T.J.69
Higgins, M.E.70
Ji, R.R.71
Ke, Z.72
Ketchum, K.A.73
Lai, Z.74
Lei, Y.75
Li, Z.76
Li, J.77
Liang, Y.78
Lin, X.79
Lu, F.80
Merkulov, G.V.81
Milshina, N.82
Moore, H.M.83
Naik, A.K.84
Narayan, V.A.85
Neelam, B.86
Nusskern, D.87
Rusch, D.B.88
Salzberg, S.89
Shao, W.90
Shue, B.91
Sun, J.92
Wang, Z.93
Wang, A.94
Wang, X.95
Wang, J.96
Wei, M.97
Wides, R.98
Xiao, C.99
Yan, C.100
Yao, A.101
Ye, J.102
Zhan, M.103
Zhang, W.104
Zhang, H.105
Zhao, Q.106
Zheng, L.107
Zhong, F.108
Zhong, W.109
Zhu, S.110
Zhao, S.111
Gilbert, D.112
Baumhueter, S.113
Spier, G.114
Carter, C.115
Cravchik, A.116
Woodage, T.117
Ali, F.118
An, H.119
Awe, A.120
Baldwin, D.121
Baden, H.122
Barnstead, M.123
Barrow, I.124
Beeson, K.125
Busam, D.126
Carver, A.127
Center, A.128
Cheng, M.L.129
Curry, L.130
Danaher, S.131
Davenport, L.132
Desilets, R.133
Dietz, S.134
Dodson, K.135
Doup, L.136
Ferriera, S.137
Garg, N.138
Gluecksmann, A.139
Hart, B.140
Haynes, J.141
Haynes, C.142
Heiner, C.143
Hladun, S.144
Hostin, D.145
Houck, J.146
Howland, T.147
Ibegwam, C.148
Johnson, J.149
Kalush, F.150
Kline, L.151
Koduru, S.152
Love, A.153
Mann, F.154
May, D.155
McCawley, S.156
McIntosh, T.157
McMullen, I.158
Moy, M.159
Moy, L.160
Murphy, B.161
Nelson, K.162
Pfannkoch, C.163
Pratts, E.164
Puri, V.165
Qureshi, H.166
Reardon, M.167
Rodriguez, R.168
Rogers, Y.H.169
Romblad, D.170
Ruhfel, B.171
Scott, R.172
Sitter, C.173
Smallwood, M.174
Stewart, E.175
Strong, R.176
Suh, E.177
Thomas, R.178
Tint, N.N.179
Tse, S.180
Vech, C.181
Wang, G.182
Wetter, J.183
Williams, S.184
Williams, M.185
Windsor, S.186
Winn-Deen, E.187
Wolfe, K.188
Zaveri, J.189
Zaveri, K.190
Abril, J.F.191
Guigó, R.192
Campbell, M.J.193
Sjolander, K.V.194
Karlak, B.195
Kejariwal, A.196
Mi, H.197
Lazareva, B.198
Hatton, T.199
Narechania, A.200
Diemer, K.201
Muruganujan, A.202
Guo, N.203
Sato, S.204
Bafna, V.205
Istrail, S.206
Lippert, R.207
Schwartz, R.208
Walenz, B.209
Yooseph, S.210
Allen, D.211
Basu, A.212
Baxendale, J.213
Blick, L.214
Caminha, M.215
Carnes-Stine, J.216
Caulk, P.217
Chiang, Y.H.218
Coyne, M.219
Dahlke, C.220
Mays, A.221
Dombroski, M.222
Donnelly, M.223
Ely, D.224
Esparham, S.225
Fosler, C.226
Gire, H.227
Glanowski, S.228
Glasser, K.229
Glodek, A.230
Gorokhov, M.231
Graham, K.232
Gropman, B.233
Harris, M.234
Heil, J.235
Henderson, S.236
Hoover, J.237
Jennings, D.238
Jordan, C.239
Jordan, J.240
Kasha, J.241
Kagan, L.242
Kraft, C.243
Levitsky, A.244
Lewis, M.245
Liu, X.246
Lopez, J.247
Ma, D.248
Majoros, W.249
McDaniel, J.250
Murphy, S.251
Newman, M.252
Nguyen, T.253
Nguyen, N.254
Nodell, M.255
Pan, S.256
Peck, J.257
Peterson, M.258
Rowe, W.259
Sanders, R.260
Scott, J.261
Simpson, M.262
Smith, T.263
Sprague, A.264
Stockwell, T.265
Turner, R.266
Venter, E.267
Wang, M.268
Wen, M.269
Wu, D.270
Wu, M.271
Xia, A.272
Zandieh, A.273
Zhu, X.274
more..
-
219
-
-
80053045739
-
Molecular mechanisms of long noncoding RNAs
-
PID: 21925379, COI: 1:CAS:528:DC%2BC3MXhtFymsLjP
-
Wang K C, Chang H Y (2011). Molecular mechanisms of long noncoding RNAs. Mol Cell, 43(6): 904–914
-
(2011)
Mol Cell
, vol.43
, Issue.6
, pp. 904-914
-
-
Wang, K.C.1
Chang, H.Y.2
-
220
-
-
79953748673
-
A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
-
PID: 21423168, COI: 1:CAS:528:DC%2BC3MXjsVKrsro%3D
-
Wang K C, Yang YW, Liu B, Sanyal A, Corces-Zimmerman R, Chen Y, Lajoie B R, Protacio A, Flynn R A, Gupta R A, Wysocka J, Lei M, Dekker J, Helms J A, Chang H Y (2011). A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression. Nature, 472(7341): 120–124
-
(2011)
Nature
, vol.472
, Issue.7341
, pp. 120-124
-
-
Wang, K.C.1
Yang, Y.W.2
Liu, B.3
Sanyal, A.4
Corces-Zimmerman, R.5
Chen, Y.6
Lajoie, B.R.7
Protacio, A.8
Flynn, R.A.9
Gupta, R.A.10
Wysocka, J.11
Lei, M.12
Dekker, J.13
Helms, J.A.14
Chang, H.Y.15
-
221
-
-
84890031514
-
The THO complex regulates pluripotency gene mRNA export and controls embryonic stem cell self-renewal and somatic cell reprogramming
-
PID: 24315442, COI: 1:CAS:528:DC%2BC3sXhvFymu7%2FL
-
Wang L, Miao Y L, Zheng X, Lackford B, Zhou B, Han L, Yao C, Ward J M, Burkholder A, Lipchina I, Fargo D C, Hochedlinger K, Shi Y, Williams C J, Hu G (2013). The THO complex regulates pluripotency gene mRNA export and controls embryonic stem cell self-renewal and somatic cell reprogramming. Cell Stem Cell, 13(6): 676–690
-
(2013)
Cell Stem Cell
, vol.13
, Issue.6
, pp. 676-690
-
-
Wang, L.1
Miao, Y.L.2
Zheng, X.3
Lackford, B.4
Zhou, B.5
Han, L.6
Yao, C.7
Ward, J.M.8
Burkholder, A.9
Lipchina, I.10
Fargo, D.C.11
Hochedlinger, K.12
Shi, Y.13
Williams, C.J.14
Hu, G.15
-
222
-
-
33646856655
-
Thoc1/Hpr1/p84 is essential for early embryonic development in the mouse
-
PID: 16705185, COI: 1:CAS:528:DC%2BD28XltlWitLg%3D
-
Wang X, Chang Y, Li Y, Zhang X, Goodrich D W (2006). Thoc1/Hpr1/p84 is essential for early embryonic development in the mouse. Mol Cell Biol, 26(11): 4362–4367
-
(2006)
Mol Cell Biol
, vol.26
, Issue.11
, pp. 4362-4367
-
-
Wang, X.1
Chang, Y.2
Li, Y.3
Zhang, X.4
Goodrich, D.W.5
-
223
-
-
0037162703
-
Modular recognition of RNA by a human pumilio-homology domain
-
PID: 12202039, COI: 1:CAS:528:DC%2BD38Xmslyjt7o%3D
-
Wang X, McLachlan J, Zamore P D, Hall T M (2002). Modular recognition of RNA by a human pumilio-homology domain. Cell, 110(4): 501–512
-
(2002)
Cell
, vol.110
, Issue.4
, pp. 501-512
-
-
Wang, X.1
McLachlan, J.2
Zamore, P.D.3
Hall, T.M.4
-
224
-
-
0035022798
-
Crystal structure of a Pumilio homology domain
-
PID: 11336708, COI: 1:CAS:528:DC%2BD3MXjsVentLY%3D
-
Wang X, Zamore P D, Hall T M (2001). Crystal structure of a Pumilio homology domain. Mol Cell, 7(4): 855–865
-
(2001)
Mol Cell
, vol.7
, Issue.4
, pp. 855-865
-
-
Wang, X.1
Zamore, P.D.2
Hall, T.M.3
-
225
-
-
33847323881
-
DGCR8 is essential for microRNA biogenesis and silencing of embryonic stem cell self-renewal
-
PID: 17259983, COI: 1:CAS:528:DC%2BD2sXitVOktrw%3D
-
Wang Y, Medvid R, Melton C, Jaenisch R, Blelloch R (2007). DGCR8 is essential for microRNA biogenesis and silencing of embryonic stem cell self-renewal. Nat Genet, 39(3): 380–385
-
(2007)
Nat Genet
, vol.39
, Issue.3
, pp. 380-385
-
-
Wang, Y.1
Medvid, R.2
Melton, C.3
Jaenisch, R.4
Blelloch, R.5
-
226
-
-
84897051164
-
HITS-CLIP and integrative modeling define the Rbfox splicing-regulatory network linked to brain development and autism
-
PID: 24613350, COI: 1:CAS:528:DC%2BC2cXjvFWitrY%3D
-
Weyn-Vanhentenryck S M, Mele A, Yan Q, Sun S, Farny N, Zhang Z, Xue C, Herre M, Silver P A, Zhang M Q, Krainer A R, Darnell R B, Zhang C (2014). HITS-CLIP and integrative modeling define the Rbfox splicing-regulatory network linked to brain development and autism. Cell Reports, 6(6): 1139–1152
-
(2014)
Cell Reports
, vol.6
, Issue.6
, pp. 1139-1152
-
-
Weyn-Vanhentenryck, S.M.1
Mele, A.2
Yan, Q.3
Sun, S.4
Farny, N.5
Zhang, Z.6
Xue, C.7
Herre, M.8
Silver, P.A.9
Zhang, M.Q.10
Krainer, A.R.11
Darnell, R.B.12
Zhang, C.13
-
227
-
-
84856962477
-
Enhancer decommissioning by LSD1 during embryonic stem cell differentiation
-
PID: 22297846, COI: 1:CAS:528:DC%2BC38Xhs1Cqt7k%3D
-
Whyte W A, Bilodeau S, Orlando D A, Hoke H A, Frampton G M, Foster C T, Cowley S M, Young R A (2012). Enhancer decommissioning by LSD1 during embryonic stem cell differentiation. Nature, 482(7384): 221–225
-
(2012)
Nature
, vol.482
, Issue.7384
, pp. 221-225
-
-
Whyte, W.A.1
Bilodeau, S.2
Orlando, D.A.3
Hoke, H.A.4
Frampton, G.M.5
Foster, C.T.6
Cowley, S.M.7
Young, R.A.8
-
228
-
-
84868160135
-
LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance
-
PID: 22959275, COI: 1:CAS:528:DC%2BC38XhtlSktbnL
-
Wilbert M L, Huelga S C, Kapeli K, Stark T J, Liang T Y, Chen S X, Yan B Y, Nathanson J L, Hutt K R, Lovci M T, Kazan H, Vu A Q, Massirer K B, Morris Q, Hoon S, Yeo G W (2012). LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance. Mol Cell, 48(2): 195–206
-
(2012)
Mol Cell
, vol.48
, Issue.2
, pp. 195-206
-
-
Wilbert, M.L.1
Huelga, S.C.2
Kapeli, K.3
Stark, T.J.4
Liang, T.Y.5
Chen, S.X.6
Yan, B.Y.7
Nathanson, J.L.8
Hutt, K.R.9
Lovci, M.T.10
Kazan, H.11
Vu, A.Q.12
Massirer, K.B.13
Morris, Q.14
Hoon, S.15
Yeo, G.W.16
-
229
-
-
0035997370
-
The La protein
-
PID: 12045101, COI: 1:CAS:528:DC%2BD38Xos1Cltrs%3D
-
Wolin S L, Cedervall T (2002). The La protein. Annu Rev Biochem, 71(1): 375–403
-
(2002)
Annu Rev Biochem
, vol.71
, Issue.1
, pp. 375-403
-
-
Wolin, S.L.1
Cedervall, T.2
-
230
-
-
79955781599
-
L1TD1 is a marker for undifferentiated human embryonic stem cells
-
PID: 21559406, COI: 1:CAS:528:DC%2BC3MXls1Kkur8%3D
-
Wong R C, Ibrahim A, Fong H, Thompson N, Lock L F, Donovan P J (2011). L1TD1 is a marker for undifferentiated human embryonic stem cells. PLoS ONE, 6(4): e19355
-
(2011)
PLoS ONE
, vol.6
, Issue.4
, pp. e19355
-
-
Wong, R.C.1
Ibrahim, A.2
Fong, H.3
Thompson, N.4
Lock, L.F.5
Donovan, P.J.6
-
231
-
-
77950396799
-
Dynamic transcriptomes during neural differentiation of human embryonic stem cells revealed by short, long, and paired-end sequencing
-
PID: 20194744, COI: 1:CAS:528:DC%2BC3cXjvFels7c%3D
-
Wu J Q, Habegger L, Noisa P, Szekely A, Qiu C, Hutchison S, Raha D, Egholm M, Lin H, Weissman S, Cui W, Gerstein M, Snyder M (2010). Dynamic transcriptomes during neural differentiation of human embryonic stem cells revealed by short, long, and paired-end sequencing. Proc Natl Acad Sci USA, 107(11): 5254–5259
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.11
, pp. 5254-5259
-
-
Wu, J.Q.1
Habegger, L.2
Noisa, P.3
Szekely, A.4
Qiu, C.5
Hutchison, S.6
Raha, D.7
Egholm, M.8
Lin, H.9
Weissman, S.10
Cui, W.11
Gerstein, M.12
Snyder, M.13
-
232
-
-
84876057018
-
Mouse Dazl and its novel splice variant functions in translational repression of target mRNAs in embryonic stem cells
-
PID: 23298641, COI: 1:CAS:528:DC%2BC3sXlsFCisrg%3D
-
Xu X, Tan X, Lin Q, Schmidt B, Engel W, Pantakani D V (2013). Mouse Dazl and its novel splice variant functions in translational repression of target mRNAs in embryonic stem cells. Biochim Biophys Acta, 1829(5): 425–435
-
(2013)
Biochim Biophys Acta
, vol.1829
, Issue.5
, pp. 425-435
-
-
Xu, X.1
Tan, X.2
Lin, Q.3
Schmidt, B.4
Engel, W.5
Pantakani, D.V.6
-
233
-
-
84872601985
-
Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits
-
PID: 23313552, COI: 1:CAS:528:DC%2BC3sXmvFSrtQ%3D%3D
-
Xue Y, Ouyang K, Huang J, Zhou Y, Ouyang H, Li H, Wang G, Wu Q, Wei C, Bi Y, Jiang L, Cai Z, Sun H, Zhang K, Zhang Y, Chen J, Fu X D (2013). Direct conversion of fibroblasts to neurons by reprogramming PTB-regulated microRNA circuits. Cell, 152(1–2): 82–96
-
(2013)
Cell
, vol.152
, Issue.1-2
, pp. 82-96
-
-
Xue, Y.1
Ouyang, K.2
Huang, J.3
Zhou, Y.4
Ouyang, H.5
Li, H.6
Wang, G.7
Wu, Q.8
Wei, C.9
Bi, Y.10
Jiang, L.11
Cai, Z.12
Sun, H.13
Zhang, K.14
Zhang, Y.15
Chen, J.16
Fu, X.D.17
-
234
-
-
0642345790
-
Structure and conserved RNA binding of the PAZ domain
-
PID: 14615802
-
Yan K S, Yan S, Farooq A, Han A, Zeng L, Zhou M M (2003). Structure and conserved RNA binding of the PAZ domain. Nature, 426(6965): 468–474
-
(2003)
Nature
, vol.426
, Issue.6965
, pp. 468-474
-
-
Yan, K.S.1
Yan, S.2
Farooq, A.3
Han, A.4
Zeng, L.5
Zhou, M.M.6
-
235
-
-
84898723075
-
Essential role of lncRNA binding for WDR5 maintenance of active chromatin and embryonic stem cell pluripotency
-
PID: 24521543
-
Yang YW, Flynn R A, Chen Y, Qu K, Wan B, Wang K C, Lei M, Chang H Y (2014). Essential role of lncRNA binding for WDR5 maintenance of active chromatin and embryonic stem cell pluripotency. eLife, 3: e02046
-
(2014)
eLife
, vol.3
, pp. e02046
-
-
Yang, Y.W.1
Flynn, R.A.2
Chen, Y.3
Qu, K.4
Wan, B.5
Wang, K.C.6
Lei, M.7
Chang, H.Y.8
-
236
-
-
84879411409
-
RNA-binding protein Rbm47 binds to Nanog in mouse embryonic stem cells
-
PID: 23649762, COI: 1:CAS:528:DC%2BC3sXps1Cns78%3D
-
Yeganeh M, Seyedjafari E, Kamrani F A, Ghaemi N (2013). RNA-binding protein Rbm47 binds to Nanog in mouse embryonic stem cells. Mol Biol Rep, 40(7): 4391–4396
-
(2013)
Mol Biol Rep
, vol.40
, Issue.7
, pp. 4391-4396
-
-
Yeganeh, M.1
Seyedjafari, E.2
Kamrani, F.A.3
Ghaemi, N.4
-
237
-
-
59649107040
-
An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells
-
PID: 19136955, COI: 1:CAS:528:DC%2BD1MXktVartw%3D%3D
-
Yeo G W, Coufal N G, Liang T Y, Peng G E, Fu X D, Gage F H (2009). An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells. Nat Struct Mol Biol, 16(2): 130–137
-
(2009)
Nat Struct Mol Biol
, vol.16
, Issue.2
, pp. 130-137
-
-
Yeo, G.W.1
Coufal, N.G.2
Liang, T.Y.3
Peng, G.E.4
Fu, X.D.5
Gage, F.H.6
-
238
-
-
35748959630
-
Alternative splicing events identified in human embryonic stem cells and neural progenitors
-
PID: 17967047, COI: 1:CAS:528:DC%2BD2sXhsVCnu7fE
-
Yeo G W, Xu X, Liang T Y, Muotri A R, Carson C T, Coufal N G, Gage F H (2007). Alternative splicing events identified in human embryonic stem cells and neural progenitors. PLOS Comput Biol, 3(10): 1951–1967
-
(2007)
PLOS Comput Biol
, vol.3
, Issue.10
, pp. 1951-1967
-
-
Yeo, G.W.1
Xu, X.2
Liang, T.Y.3
Muotri, A.R.4
Carson, C.T.5
Coufal, N.G.6
Gage, F.H.7
-
239
-
-
80053900941
-
Frequent pathway mutations of splicing machinery in myelodysplasia
-
PID: 21909114, COI: 1:CAS:528:DC%2BC3MXhtFGnur3M
-
Yoshida K, Sanada M, Shiraishi Y, Nowak D, Nagata Y, Yamamoto R, Sato Y, Sato-Otsubo A, Kon A, Nagasaki M, Chalkidis G, Suzuki Y, Shiosaka M, Kawahata R, Yamaguchi T, Otsu M, Obara N, Sakata-Yanagimoto M, Ishiyama K, Mori H, Nolte F, Hofmann W K, Miyawaki S, Sugano S, Haferlach C, Koeffler H P, Shih L Y, Haferlach T, Chiba S, Nakauchi H, Miyano S, Ogawa S (2011). Frequent pathway mutations of splicing machinery in myelodysplasia. Nature, 478(7367): 64–69
-
(2011)
Nature
, vol.478
, Issue.7367
, pp. 64-69
-
-
Yoshida, K.1
Sanada, M.2
Shiraishi, Y.3
Nowak, D.4
Nagata, Y.5
Yamamoto, R.6
Sato, Y.7
Sato-Otsubo, A.8
Kon, A.9
Nagasaki, M.10
Chalkidis, G.11
Suzuki, Y.12
Shiosaka, M.13
Kawahata, R.14
Yamaguchi, T.15
Otsu, M.16
Obara, N.17
Sakata-Yanagimoto, M.18
Ishiyama, K.19
Mori, H.20
Nolte, F.21
Hofmann, W.K.22
Miyawaki, S.23
Sugano, S.24
Haferlach, C.25
Koeffler, H.P.26
Shih, L.Y.27
Haferlach, T.28
Chiba, S.29
Nakauchi, H.30
Miyano, S.31
Ogawa, S.32
more..
-
240
-
-
36749043230
-
Induced pluripotent stem cell lines derived from human somatic cells
-
PID: 18029452, COI: 1:CAS:528:DC%2BD2sXhsVGjsLbN
-
Yu J, Vodyanik M A, Smuga-Otto K, Antosiewicz-Bourget J, Frane J L, Tian S, Nie J, Jonsdottir G A, Ruotti V, Stewart R, Slukvin I I, Thomson J A (2007). Induced pluripotent stem cell lines derived from human somatic cells. Science, 318(5858): 1917–1920
-
(2007)
Science
, vol.318
, Issue.5858
, pp. 1917-1920
-
-
Yu, J.1
Vodyanik, M.A.2
Smuga-Otto, K.3
Antosiewicz-Bourget, J.4
Frane, J.L.5
Tian, S.6
Nie, J.7
Jonsdottir, G.A.8
Ruotti, V.9
Stewart, R.10
Slukvin, I.I.11
Thomson, J.A.12
-
241
-
-
0026716104
-
SR proteins: a conserved family of pre-mRNA splicing factors
-
PID: 1577277, COI: 1:CAS:528:DyaK38Xlt1KmtLg%3D
-
Zahler A M, Lane W S, Stolk J A, Roth M B (1992). SR proteins: a conserved family of pre-mRNA splicing factors. Genes Dev, 6(5): 837–847
-
(1992)
Genes Dev
, vol.6
, Issue.5
, pp. 837-847
-
-
Zahler, A.M.1
Lane, W.S.2
Stolk, J.A.3
Roth, M.B.4
-
242
-
-
0026649523
-
Cloning and intracellular localization of the U2 small nuclear ribonucleoprotein auxiliary factor small subunit
-
PID: 1388271, COI: 1:CAS:528:DyaK3sXks1GrtLY%3D
-
Zhang M, Zamore P D, Carmo-Fonseca M, Lamond A I, Green M R(1992). Cloning and intracellular localization of the U2 small nuclear ribonucleoprotein auxiliary factor small subunit. Proc Natl Acad Sci USA, 89(18): 8769–8773
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, Issue.18
, pp. 8769-8773
-
-
Zhang, M.1
Zamore, P.D.2
Carmo-Fonseca, M.3
Lamond, A.I.4
Green, M.R.5
-
243
-
-
78650253763
-
Genome-wide identification of polycomb-associated RNAs by RIP-seq
-
PID: 21172659, COI: 1:CAS:528:DC%2BC3cXhsF2itr7M
-
Zhao J, Ohsumi T K, Kung J T, Ogawa Y, Grau D J, Sarma K, Song J J, Kingston R E, Borowsky M, Lee J T (2010). Genome-wide identification of polycomb-associated RNAs by RIP-seq. Mol Cell, 40(6): 939–953
-
(2010)
Mol Cell
, vol.40
, Issue.6
, pp. 939-953
-
-
Zhao, J.1
Ohsumi, T.K.2
Kung, J.T.3
Ogawa, Y.4
Grau, D.J.5
Sarma, K.6
Song, J.J.7
Kingston, R.E.8
Borowsky, M.9
Lee, J.T.10
-
244
-
-
55349109963
-
Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome
-
PID: 18974356, COI: 1:CAS:528:DC%2BD1cXht12ltb7M
-
Zhao J, Sun B K, Erwin J A, Song J J, Lee J T (2008). Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome. Science, 322(5902): 750–756
-
(2008)
Science
, vol.322
, Issue.5902
, pp. 750-756
-
-
Zhao, J.1
Sun, B.K.2
Erwin, J.A.3
Song, J.J.4
Lee, J.T.5
-
245
-
-
67649671966
-
SR proteins in vertical integration of gene expression from transcription to RNA processing to translation
-
PID: 19595711, COI: 1:CAS:528:DC%2BD1MXps1ejs7c%3D
-
Zhong X Y, Wang P, Han J, Rosenfeld M G, Fu X D (2009). SR proteins in vertical integration of gene expression from transcription to RNA processing to translation. Mol Cell, 35(1): 1–10
-
(2009)
Mol Cell
, vol.35
, Issue.1
, pp. 1-10
-
-
Zhong, X.Y.1
Wang, P.2
Han, J.3
Rosenfeld, M.G.4
Fu, X.D.5
-
246
-
-
0017801726
-
RNA-protein cross-linking in Eschericia coli 30S ribosomal subunits: a method for the direct analysis of the RNA regions involved in the cross-links
-
PID: 349502, COI: 1:CAS:528:DyaE1cXktVWrt7w%3D
-
Zwieb C, Brimacombe R (1978). RNA-protein cross-linking in Eschericia coli 30S ribosomal subunits: a method for the direct analysis of the RNA regions involved in the cross-links. Nucleic Acids Res, 5(4): 1189–1206
-
(1978)
Nucleic Acids Res
, vol.5
, Issue.4
, pp. 1189-1206
-
-
Zwieb, C.1
Brimacombe, R.2
|