LIN28 alters cell fate succession and acts independently of the let-7 microRNA during neurogliogenesis in vitro

Development

Volumn 137, Issue 6, 2010, Pages 891-900

  Balzer, Erica ^a   Heine, Christian ^a   Jiang, Qiang ^b   Lee, Vivian M ^b   Moss, Eric G ^a  

^a UNIVERSITY OF MEDICINE AND DENTISTRY OF NEW JERSEY   (United States)

^b MEDICAL COLLEGE OF WISCONSIN   (United States)

Author keywords

Heterochronic gene; Let 7 (Mirlet7); LIN28; LIN28B; MicroRNA; Mouse; Neurogliogenesis; RNA binding protein

Indexed keywords

BETA TUBULIN; CELL MARKER; COMPLEMENTARY DNA; GLIAL FIBRILLARY ACIDIC PROTEIN; GREEN FLUORESCENT PROTEIN; IRON REGULATORY FACTOR; MESSENGER RNA; MICRORNA; MICRORNA LET 7; NESTIN; OCTAMER TRANSCRIPTION FACTOR 4; PROTEIN TUJ 1; REGULATOR PROTEIN; RNA BINDING PROTEIN; RNA BINDING PROTEIN LIN 28; SOMATOMEDIN B; TRANSCRIPTION FACTOR SOX2; UNCLASSIFIED DRUG; LIN 28 PROTEIN, MOUSE; LIN-28 PROTEIN, MOUSE; MIRNLET7 MICRORNA, MOUSE;

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; CELL COUNT; CELL CULTURE; CELL FATE; CELL MATURATION; CELL PROLIFERATION; CONTROLLED STUDY; EMBRYO; FLUORESCENCE MICROSCOPY; GENE EXPRESSION PROFILING; GENETIC PROCEDURES; GLIA; HUMAN; IMMUNOBLOTTING; IMMUNOFLUORESCENCE; IMMUNOHISTOCHEMISTRY; IN SITU HYBRIDIZATION; IRON RESPONSIVE ELEMENT; MOUSE; NERVE CELL DIFFERENTIATION; NEURAL TUBE; NONHUMAN; PLASMID; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN LOCALIZATION; PROTEIN RNA BINDING; QUANTITATIVE ANALYSIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA PROCESSING; STABLE TRANSFECTION; THREE HYBRID SYSTEM; YEAST; ANIMAL; ANIMAL EMBRYO; CELL DIFFERENTIATION; CHEMISTRY; CYTOLOGY; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; NERVOUS SYSTEM DEVELOPMENT; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; PRENATAL DEVELOPMENT; PROTEIN TERTIARY STRUCTURE;

CAENORHABDITIS ELEGANS; VERTEBRATA;

ANIMALS; CELL COUNT; CELL DIFFERENTIATION; CELL PROLIFERATION; CELLS, CULTURED; CONSERVED SEQUENCE; EMBRYO, MAMMALIAN; GENE EXPRESSION REGULATION, DEVELOPMENTAL; MICE; MICRORNAS; NEURAL TUBE; NEUROGENESIS; NEUROGLIA; PROTEIN STRUCTURE, TERTIARY; RNA-BINDING PROTEINS;

EID: 77950357078     PISSN: 09501991     EISSN: 14779129     Source Type: Journal    
DOI: 10.1242/dev.042895     Document Type: Article

References (44)

1. Abbott, A. L., Alvarez-Saavedra, E., Miska, E. A., Lau, N. C., Bartel, D. P., Horvitz, H. R. and Ambros, V. (2005). The let-7 MicroRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in Caenorhabditis elegans. Dev. Cell 9, 403-414.
2. Ambros, V. and Horvitz, H. R. (1984). Heterochronic mutants of the nematode Caenorhabditis elegans. Science 226, 409-416.
3. Bain, G., Ray, W. J., Yao, M. and Gottlieb, D. I. (1994). From embryonal carcinoma cells to neurons: the P19 pathway. BioEssays 16, 343-348.
4. Balagopal, V. and Parker, R. (2009). Polysomes, P bodies and stress granules: states and fates of eukaryotic mRNAs. Curr. Opin. Cell Biol. 21, 403-408.
5. Balzer, E. and Moss, E. G. (2007). Localization of the developmental timing regulator Lin28 to mRNP complexes, P-bodies and stress granules. RNA Biol. 4, 16-25.
6. Chan, S. P., Ramaswamy, G., Choi, E. Y. and Slack, F. J. (2008). Identification of specific let-7 microRNA binding complexes in Caenorhabditis elegans. RNA 14, 2104-2114.
7. Corcoran, R. B., Bachar Raveh, T., Barakat, M. T., Lee, E. Y. and Scott, M. P. (2008). Insulin-like growth factor 2 is required for progression to advanced medulloblastoma in patched1 heterozygous mice. Cancer Res. 68, 8788-8795.
8. Ellis, P., Fagan, B. M., Magness, S. T., Hutton, S., Taranova, O., Hayashi, S., McMahon, A., Rao, M. and Pevny, L. (2004). SOX2, a persistent marker for multipotential neural stem cells derived from embryonic stem cells, the embryo or the adult. Dev. Neurosci. 26, 148-165.
9. Guo, Y., Chen, Y., Ito, H., Watanabe, A., Ge, X., Kodama, T. and Aburatani, H. (2006). Identification and characterization of lin-28 homolog B (LIN28B) in human hepatocellular carcinoma. Gene 384, 51-61.
10. Hagan, J. P., Piskounova, E. and Gregory, R. I. (2009). Lin28 recruits the TUTase Zcchc11 to inhibit let-7 maturation in mouse embryonic stem cells. Nat. Struct. Mol. Biol. 16, 1021-1025.
11. Heo, I., Joo, C., Cho, J., Ha, M., Han, J. and Kim, V. N. (2008). Lin28 mediates the terminal uridylation of let-7 precursor MicroRNA. Mol. Cell 32, 276-284.
12. Heo, I., Joo, C., Kim, Y. K., Ha, M., Yoon, M. J., Cho, J., Yeom, K. H., Han, J. and Kim, V. N. (2009). TUT4 in concert with Lin28 suppresses microRNA biogenesis through pre-microRNA uridylation. Cell 138, 696-708.
13. Hook, B., Bernstein, D., Zhang, B. and Wickens, M. (2005). RNA-protein interactions in the yeast three-hybrid system: affinity, sensitivity, and enhanced library screening. RNA 11, 227-233.
14. Lehrbach, N. J., Armisen, J., Lightfoot, H. L., Murfitt, K. J., Bugaut, A., Balasubramanian, S. and Miska, E. A. (2009). LIN-28 and the poly(U) polymerase PUP-2 regulate let-7 microRNA processing in Caenorhabditis elegans. Nat. Struct. Mol. Biol. 16, 1016-1020.
15. Lendahl, U., Zimmerman, L. B. and McKay, R. D. (1990). CNS stem cells express a new class of intermediate filament protein. Cell 60, 585-595.
16. Menezes, J. R. and Luskin, M. B. (1994). Expression of neuron-specific tubulin defines a novel population in the proliferative layers of the developing telencephalon. J. Neurosci. 14, 5399-5416.
17. Mori, H., Sakakibara, S., Imai, T., Nakamura, Y., Iijima, T., Suzuki, A., Yuasa, Y., Takeda, M. and Okano, H. (2001). Expression of mouse igf2 mRNA-binding protein 3 and its implications for the developing central nervous system. J. Neurosci. Res. 64, 132-143.
18. Morita, K. and Han, M. (2006). Multiple mechanisms are involved in regulating the expression of the developmental timing regulator lin-28 in Caenorhabditis elegans. EMBO J. 25, 5794-5804.
19. Moss, E. G. (2007). Heterochronic genes and the nature of developmental time. Curr. Biol. 17, R425-R434.
20. Moss, E. G. and Tang, L. (2003). Conservation of the heterochronic regulator Lin-28, its developmental expression and microRNA complementary sites. Dev. Biol. 258, 432-442.
21. Moss, E. G., Lee, R. C. and Ambros, V. (1997). The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA. Cell 88, 637-646.
22. Newman, M. A., Thomson, J. M. and Hammond, S. M. (2008). Lin-28 interaction with the Let-7 precursor loop mediates regulated microRNA processing. RNA 14, 1539-1549.
23. Nieto, M., Schuurmans, C., Britz, O. and Guillemot, F. (2001). Neural bHLH genes control the neuronal versus glial fate decision in cortical progenitors. Neuron 29, 401-413.
24. Pasquinelli, A. E., Reinhart, B. J., Slack, F., Martindale, M. Q., Kuroda, M. I., Maller, B., Hayward, D. C., Ball, E. E., Degnan, B., Muller, P. et al. (2000). Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA. Nature 408, 86-89.
25. Pearson, B. J. and Doe, C. Q. (2004). Specification of temporal identity in the developing nervous system. Annu. Rev. Cell Dev. Biol. 20, 619-647.
26. Piskounova, E., Viswanathan, S. R., Janas, M., Lapierre, R. J., Daley, G. Q., Sliz, P. and Gregory, R. I. (2008). Determinants of microRNA processing inhibition by the developmentally regulated RNA-binding protein Lin28. J. Biol. Chem. 283, 21310-21314.
27. Polesskaya, A., Cuvellier, S., Naguibneva, I., Duquet, A., Moss, E. G. and Harel-Bellan, A. (2007). Lin-28 binds IGF-2 mRNA and participates in skeletal myogenesis by increasing translation efficiency. Genes Dev. 21, 1125-1138.
28. Relaix, F., Weng, X., Marazzi, G., Yang, E., Copeland, N., Jenkins, N., Spence, S. E. and Sassoon, D. (1996). Pw1, a novel zinc finger gene implicated in the myogenic and neuronal lineages. Dev. Biol. 177, 383-396.
29. Richards, M., Tan, S. P., Tan, J. H., Chan, W. K. and Bongso, A. (2004). The transcriptome profile of human embryonic stem cells as defined by SAGE. Stem Cells 22, 51-64.
30. Roush, S. and Slack, F. J. (2008). The let-7 family of microRNAs. Trends Cell Biol. 18, 505-516.
31. Rudnicki, M. a. M. (1987). Teratocarcinomas and Embryonic Stem Cells: A Practical Approach. Oxford: IRL Press.
32. Rybak, A., Fuchs, H., Smirnova, L., Brandt, C., Pohl, E. E., Nitsch, R. and Wulczyn, F. G. (2008). A feedback loop comprising lin-28 and let-7 controls pre-let-7 maturation during neural stem-cell commitment. Nat. Cell Biol. 10, 987-993.
33. Seggerson, K., Tang, L. and Moss, E. G. (2002). Two genetic circuits repress the Caenorhabditis elegans heterochronic gene lin-28 after translation initiation. Dev. Biol. 243, 215-225.
34. Sim, F. J., Keyoung, H. M., Goldman, J. E., Kim, D. K., Jung, H. W., Roy, N. S. and Goldman, S. A. (2006). Neurocytoma is a tumor of adult neuronal progenitor cells. J. Neurosci. 26, 12544-12555.
35. Sun, Y., Nadal-Vicens, M., Misono, S., Lin, M. Z., Zubiaga, A., Hua, X., Fan, G. and Greenberg, M. E. (2001). Neurogenin promotes neurogenesis and inhibits glial differentiation by independent mechanisms. Cell 104, 365-376.
36. Thomson, J. M., Newman, M., Parker, J. S., Morin-Kensicki, E. M., Wright, T. and Hammond, S. M. (2006). Extensive post-transcriptional regulation of microRNAs and its implications for cancer. Genes Dev. 20, 2202-2207.
37. Viswanathan, S. R., Daley, G. Q. and Gregory, R. I. (2008). Selective blockade of microRNA processing by Lin28. Science 320, 97-100.
38. Wilkinson, D. (1992). Whole mount in situ hybridization of vertebrate embryos. In In Situ Hybridization: A Practical Approach (ed. D. Wilkinson), pp. 75-83. Oxford: Oxford University Press.
39. Wulczyn, F. G., Smirnova, L., Rybak, A., Brandt, C., Kwidzinski, E., Ninnemann, O., Strehle, M., Seiler, A., Schumacher, S. and Nitsch, R. (2007). Post-transcriptional regulation of the let-7 microRNA during neural cell specification. FASEB J. 21, 415-426.
40. Yang, D. H. and Moss, E. G. (2003). Temporally regulated expression of Lin-28 in diverse tissues of the developing mouse. Gene Expr. Patterns 3, 719-726.
41. Yokoyama, S., Hashimoto, M., Shimizu, H., Ueno-Kudoh, H., Uchibe, K., Kimura, I. and Asahara, H. (2008). Dynamic gene expression of Lin-28 during embryonic development in mouse and chicken. Gene Expr. Patterns 8, 155-160.
42. Yu, J., Vodyanik, M. A., Smuga-Otto, K., Antosiewicz-Bourget, J., Frane, J. L., Tian, S., Nie, J., Jonsdottir, G. A., Ruotti, V., Stewart, R. et al. (2007). Induced pluripotent stem cell lines derived from human somatic cells. Science 318, 1917-1920.
43. Zhang, J. (2003). Evolution by gene duplication: an update. Trends Ecol. Evol. 18, 292-298.
44. Zhang, J., Tam, W. L., Tong, G. Q., Wu, Q., Chan, H. Y., Soh, B. S., Lou, Y., Yang, J., Ma, Y., Chai, L. et al. (2006). Sall4 modulates embryonic stem cell pluripotency and early embryonic development by the transcriptional regulation of Pou5f1. Nat. Cell Biol. 8, 1114-1123.