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Volumn 138, Issue 4, 2009, Pages 696-708

TUT4 in Concert with Lin28 Suppresses MicroRNA Biogenesis through Pre-MicroRNA Uridylation

Author keywords

PROTEINS; RNA; STEMCELL

Indexed keywords

MICRORNA; PROTEIN LIN28; REGULATOR PROTEIN; TERMINAL URIDYLYL TRANSFERASE 4; TRANSFERASE; UNCLASSIFIED DRUG;

EID: 68749102148     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cell.2009.08.002     Document Type: Article
Times cited : (691)

References (65)
  • 1
    • 0034636984 scopus 로고    scopus 로고
    • NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition
    • Amarasinghe G.K., De Guzman R.N., Turner R.B., Chancellor K.J., Wu Z.R., and Summers M.F. NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition. J. Mol. Biol. 301 (2000) 491-511
    • (2000) J. Mol. Biol. , vol.301 , pp. 491-511
    • Amarasinghe, G.K.1    De Guzman, R.N.2    Turner, R.B.3    Chancellor, K.J.4    Wu, Z.R.5    Summers, M.F.6
  • 2
    • 34447530917 scopus 로고    scopus 로고
    • Localization of the developmental timing regulator Lin28 to mRNP complexes, P-bodies and stress granules
    • Balzer E., and Moss E.G. Localization of the developmental timing regulator Lin28 to mRNP complexes, P-bodies and stress granules. RNA Biol. 4 (2007) 16-25
    • (2007) RNA Biol. , vol.4 , pp. 16-25
    • Balzer, E.1    Moss, E.G.2
  • 4
    • 0035905766 scopus 로고    scopus 로고
    • Role for a bidentate ribonuclease in the initiation step of RNA interference
    • Bernstein E., Caudy A.A., Hammond S.M., and Hannon G.J. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409 (2001) 363-366
    • (2001) Nature , vol.409 , pp. 363-366
    • Bernstein, E.1    Caudy, A.A.2    Hammond, S.M.3    Hannon, G.J.4
  • 5
    • 1642499415 scopus 로고    scopus 로고
    • Exportin 5 is a RanGTP-dependent dsRNA-binding protein that mediates nuclear export of pre-miRNAs
    • Bohnsack M.T., Czaplinski K., and Gorlich D. Exportin 5 is a RanGTP-dependent dsRNA-binding protein that mediates nuclear export of pre-miRNAs. RNA 10 (2004) 185-191
    • (2004) RNA , vol.10 , pp. 185-191
    • Bohnsack, M.T.1    Czaplinski, K.2    Gorlich, D.3
  • 6
    • 50549095181 scopus 로고    scopus 로고
    • let-7 microRNAs in development, stem cells and cancer
    • Bussing I., Slack F.J., and Grosshans H. let-7 microRNAs in development, stem cells and cancer. Trends Mol. Med. 14 (2008) 400-409
    • (2008) Trends Mol. Med. , vol.14 , pp. 400-409
    • Bussing, I.1    Slack, F.J.2    Grosshans, H.3
  • 8
    • 2242469712 scopus 로고    scopus 로고
    • Structure of the HIV-1 nucleocapsid protein bound to the SL3 psi-RNA recognition element
    • De Guzman R.N., Wu Z.R., Stalling C.C., Pappalardo L., Borer P.N., and Summers M.F. Structure of the HIV-1 nucleocapsid protein bound to the SL3 psi-RNA recognition element. Science 279 (1998) 384-388
    • (1998) Science , vol.279 , pp. 384-388
    • De Guzman, R.N.1    Wu, Z.R.2    Stalling, C.C.3    Pappalardo, L.4    Borer, P.N.5    Summers, M.F.6
  • 9
    • 9144224451 scopus 로고    scopus 로고
    • Processing of primary microRNAs by the Microprocessor complex
    • Denli A.M., Tops B.B., Plasterk R.H., Ketting R.F., and Hannon G.J. Processing of primary microRNAs by the Microprocessor complex. Nature 432 (2004) 231-235
    • (2004) Nature , vol.432 , pp. 231-235
    • Denli, A.M.1    Tops, B.B.2    Plasterk, R.H.3    Ketting, R.F.4    Hannon, G.J.5
  • 12
    • 17844364875 scopus 로고    scopus 로고
    • Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing
    • Grishok A., Pasquinelli A.E., Conte D., Li N., Parrish S., Ha I., Baillie D.L., Fire A., Ruvkun G., and Mello C.C. Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing. Cell 106 (2001) 23-34
    • (2001) Cell , vol.106 , pp. 23-34
    • Grishok, A.1    Pasquinelli, A.E.2    Conte, D.3    Li, N.4    Parrish, S.5    Ha, I.6    Baillie, D.L.7    Fire, A.8    Ruvkun, G.9    Mello, C.C.10
  • 13
    • 14644398601 scopus 로고    scopus 로고
    • The temporal patterning microRNA let-7 regulates several transcription factors at the larval to adult transition in C. elegans
    • Grosshans H., Johnson T., Reinert K.L., Gerstein M., and Slack F.J. The temporal patterning microRNA let-7 regulates several transcription factors at the larval to adult transition in C. elegans. Dev. Cell 8 (2005) 321-330
    • (2005) Dev. Cell , vol.8 , pp. 321-330
    • Grosshans, H.1    Johnson, T.2    Reinert, K.L.3    Gerstein, M.4    Slack, F.J.5
  • 14
    • 33751042873 scopus 로고    scopus 로고
    • Identification and characterization of lin-28 homolog B (LIN28B) in human hepatocellular carcinoma
    • Guo Y., Chen Y., Ito H., Watanabe A., Ge X., Kodama T., and Aburatani H. Identification and characterization of lin-28 homolog B (LIN28B) in human hepatocellular carcinoma. Gene 384 (2006) 51-61
    • (2006) Gene , vol.384 , pp. 51-61
    • Guo, Y.1    Chen, Y.2    Ito, H.3    Watanabe, A.4    Ge, X.5    Kodama, T.6    Aburatani, H.7
  • 15
    • 0035839109 scopus 로고    scopus 로고
    • Argonaute2, a link between genetic and biochemical analyses of RNAi
    • Hammond S.M., Boettcher S., Caudy A.A., Kobayashi R., and Hannon G.J. Argonaute2, a link between genetic and biochemical analyses of RNAi. Science 293 (2001) 1146-1150
    • (2001) Science , vol.293 , pp. 1146-1150
    • Hammond, S.M.1    Boettcher, S.2    Caudy, A.A.3    Kobayashi, R.4    Hannon, G.J.5
  • 16
    • 10644234841 scopus 로고    scopus 로고
    • The Drosha-DGCR8 complex in primary microRNA processing
    • Han J., Lee Y., Yeom K.H., Kim Y.K., Jin H., and Kim V.N. The Drosha-DGCR8 complex in primary microRNA processing. Genes Dev. 18 (2004) 3016-3027
    • (2004) Genes Dev. , vol.18 , pp. 3016-3027
    • Han, J.1    Lee, Y.2    Yeom, K.H.3    Kim, Y.K.4    Jin, H.5    Kim, V.N.6
  • 17
    • 53949088050 scopus 로고    scopus 로고
    • Lin28 mediates the terminal uridylation of let-7 precursor MicroRNA
    • Heo I., Joo C., Cho J., Ha M., Han J., and Kim V.N. Lin28 mediates the terminal uridylation of let-7 precursor MicroRNA. Mol. Cell 32 (2008) 276-284
    • (2008) Mol. Cell , vol.32 , pp. 276-284
    • Heo, I.1    Joo, C.2    Cho, J.3    Ha, M.4    Han, J.5    Kim, V.N.6
  • 18
    • 0035800521 scopus 로고    scopus 로고
    • A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA
    • Hutvagner G., McLachlan J., Pasquinelli A.E., Balint E., Tuschl T., and Zamore P.D. A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA. Science 293 (2001) 834-838
    • (2001) Science , vol.293 , pp. 834-838
    • Hutvagner, G.1    McLachlan, J.2    Pasquinelli, A.E.3    Balint, E.4    Tuschl, T.5    Zamore, P.D.6
  • 20
    • 61449186404 scopus 로고    scopus 로고
    • Selective stabilization of mammalian microRNAs by 3′ adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2
    • Katoh T., Sakaguchi Y., Miyauchi K., Suzuki T., Kashiwabara S., and Baba T. Selective stabilization of mammalian microRNAs by 3′ adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2. Genes Dev. 23 (2009) 433-438
    • (2009) Genes Dev. , vol.23 , pp. 433-438
    • Katoh, T.1    Sakaguchi, Y.2    Miyauchi, K.3    Suzuki, T.4    Kashiwabara, S.5    Baba, T.6
  • 21
    • 0035887005 scopus 로고    scopus 로고
    • Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans
    • Ketting R.F., Fischer S.E., Bernstein E., Sijen T., Hannon G.J., and Plasterk R.H. Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans. Genes Dev. 15 (2001) 2654-2659
    • (2001) Genes Dev. , vol.15 , pp. 2654-2659
    • Ketting, R.F.1    Fischer, S.E.2    Bernstein, E.3    Sijen, T.4    Hannon, G.J.5    Plasterk, R.H.6
  • 23
    • 0035929322 scopus 로고    scopus 로고
    • A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans
    • Knight S.W., and Bass B.L. A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans. Science 293 (2001) 2269-2271
    • (2001) Science , vol.293 , pp. 2269-2271
    • Knight, S.W.1    Bass, B.L.2
  • 24
    • 34249026025 scopus 로고    scopus 로고
    • A family of poly(U) polymerases
    • Kwak J.E., and Wickens M. A family of poly(U) polymerases. RNA 13 (2007) 860-867
    • (2007) RNA , vol.13 , pp. 860-867
    • Kwak, J.E.1    Wickens, M.2
  • 25
    • 10344248903 scopus 로고    scopus 로고
    • The human DiGeorge syndrome critical region gene 8 and Its D. melanogaster homolog are required for miRNA biogenesis
    • Landthaler M., Yalcin A., and Tuschl T. The human DiGeorge syndrome critical region gene 8 and Its D. melanogaster homolog are required for miRNA biogenesis. Curr. Biol. 14 (2004) 2162-2167
    • (2004) Curr. Biol. , vol.14 , pp. 2162-2167
    • Landthaler, M.1    Yalcin, A.2    Tuschl, T.3
  • 27
    • 34247565615 scopus 로고    scopus 로고
    • The tumor suppressor microRNA let-7 represses the HMGA2 oncogene
    • Lee Y.S., and Dutta A. The tumor suppressor microRNA let-7 represses the HMGA2 oncogene. Genes Dev. 21 (2007) 1025-1030
    • (2007) Genes Dev. , vol.21 , pp. 1025-1030
    • Lee, Y.S.1    Dutta, A.2
  • 29
    • 35548959608 scopus 로고    scopus 로고
    • RNA-specific ribonucleotidyl transferases
    • Martin G., and Keller W. RNA-specific ribonucleotidyl transferases. RNA 13 (2007) 1834-1849
    • (2007) RNA , vol.13 , pp. 1834-1849
    • Martin, G.1    Keller, W.2
  • 30
    • 33947431322 scopus 로고    scopus 로고
    • Disrupting the pairing between let-7 and Hmga2 enhances oncogenic transformation
    • Mayr C., Hemann M.T., and Bartel D.P. Disrupting the pairing between let-7 and Hmga2 enhances oncogenic transformation. Science 315 (2007) 1576-1579
    • (2007) Science , vol.315 , pp. 1576-1579
    • Mayr, C.1    Hemann, M.T.2    Bartel, D.P.3
  • 31
    • 0018471126 scopus 로고
    • Lethals, steriles and deficiencies in a region of the X chromosome of Caenorhabditis elegans
    • Meneely P.M., and Herman R.K. Lethals, steriles and deficiencies in a region of the X chromosome of Caenorhabditis elegans. Genetics 92 (1979) 99-115
    • (1979) Genetics , vol.92 , pp. 99-115
    • Meneely, P.M.1    Herman, R.K.2
  • 33
    • 38149023239 scopus 로고    scopus 로고
    • Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5′ to 3′ and 3′ to 5′
    • Mullen T.E., and Marzluff W.F. Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5′ to 3′ and 3′ to 5′. Genes Dev. 22 (2008) 50-65
    • (2008) Genes Dev. , vol.22 , pp. 50-65
    • Mullen, T.E.1    Marzluff, W.F.2
  • 34
    • 21244454028 scopus 로고    scopus 로고
    • Human mitochondrial mRNAs are stabilized with polyadenylation regulated by mitochondria-specific poly(A) polymerase and polynucleotide phosphorylase
    • Nagaike T., Suzuki T., Katoh T., and Ueda T. Human mitochondrial mRNAs are stabilized with polyadenylation regulated by mitochondria-specific poly(A) polymerase and polynucleotide phosphorylase. J. Biol. Chem. 280 (2005) 19721-19727
    • (2005) J. Biol. Chem. , vol.280 , pp. 19721-19727
    • Nagaike, T.1    Suzuki, T.2    Katoh, T.3    Ueda, T.4
  • 36
    • 47949100595 scopus 로고    scopus 로고
    • Lin-28 interaction with the Let-7 precursor loop mediates regulated microRNA processing
    • Newman M.A., Thomson J.M., and Hammond S.M. Lin-28 interaction with the Let-7 precursor loop mediates regulated microRNA processing. RNA 14 (2008) 1539-1549
    • (2008) RNA , vol.14 , pp. 1539-1549
    • Newman, M.A.1    Thomson, J.M.2    Hammond, S.M.3
  • 37
    • 0032475827 scopus 로고    scopus 로고
    • Three-dimensional folding of an RNA hairpin required for packaging HIV-1
    • Pappalardo L., Kerwood D.J., Pelczer I., and Borer P.N. Three-dimensional folding of an RNA hairpin required for packaging HIV-1. J. Mol. Biol. 282 (1998) 801-818
    • (1998) J. Mol. Biol. , vol.282 , pp. 801-818
    • Pappalardo, L.1    Kerwood, D.J.2    Pelczer, I.3    Borer, P.N.4
  • 39
    • 65349162096 scopus 로고    scopus 로고
    • Let-7 and miR-200 microRNAs: guardians against pluripotency and cancer progression
    • Peter M.E. Let-7 and miR-200 microRNAs: guardians against pluripotency and cancer progression. Cell Cycle 8 (2009) 843-852
    • (2009) Cell Cycle , vol.8 , pp. 843-852
    • Peter, M.E.1
  • 40
    • 52049124806 scopus 로고    scopus 로고
    • Determinants of microRNA processing inhibition by the developmentally regulated RNA-binding protein Lin28
    • Piskounova E., Viswanathan S.R., Janas M., LaPierre R.J., Daley G.Q., Sliz P., and Gregory R.I. Determinants of microRNA processing inhibition by the developmentally regulated RNA-binding protein Lin28. J. Biol. Chem. 283 (2008) 21310-21314
    • (2008) J. Biol. Chem. , vol.283 , pp. 21310-21314
    • Piskounova, E.1    Viswanathan, S.R.2    Janas, M.3    LaPierre, R.J.4    Daley, G.Q.5    Sliz, P.6    Gregory, R.I.7
  • 41
    • 34247589770 scopus 로고    scopus 로고
    • Lin-28 binds IGF-2 mRNA and participates in skeletal myogenesis by increasing translation efficiency
    • Polesskaya A., Cuvellier S., Naguibneva I., Duquet A., Moss E.G., and Harel-Bellan A. Lin-28 binds IGF-2 mRNA and participates in skeletal myogenesis by increasing translation efficiency. Genes Dev. 21 (2007) 1125-1138
    • (2007) Genes Dev. , vol.21 , pp. 1125-1138
    • Polesskaya, A.1    Cuvellier, S.2    Naguibneva, I.3    Duquet, A.4    Moss, E.G.5    Harel-Bellan, A.6
  • 43
    • 0346250854 scopus 로고    scopus 로고
    • The transcriptome profile of human embryonic stem cells as defined by SAGE
    • Richards M., Tan S.P., Tan J.H., Chan W.K., and Bongso A. The transcriptome profile of human embryonic stem cells as defined by SAGE. Stem Cells 22 (2004) 51-64
    • (2004) Stem Cells , vol.22 , pp. 51-64
    • Richards, M.1    Tan, S.P.2    Tan, J.H.3    Chan, W.K.4    Bongso, A.5
  • 44
    • 34248225381 scopus 로고    scopus 로고
    • Efficient RNA polyuridylation by noncanonical poly(A) polymerases
    • Rissland O.S., Mikulasova A., and Norbury C.J. Efficient RNA polyuridylation by noncanonical poly(A) polymerases. Mol. Cell. Biol. 27 (2007) 3612-3624
    • (2007) Mol. Cell. Biol. , vol.27 , pp. 3612-3624
    • Rissland, O.S.1    Mikulasova, A.2    Norbury, C.J.3
  • 46
    • 52949091534 scopus 로고    scopus 로고
    • The let-7 family of microRNAs
    • Roush S., and Slack F.J. The let-7 family of microRNAs. Trends Cell Biol. 18 (2008) 505-516
    • (2008) Trends Cell Biol. , vol.18 , pp. 505-516
    • Roush, S.1    Slack, F.J.2
  • 47
    • 48649103982 scopus 로고    scopus 로고
    • A feedback loop comprising lin-28 and let-7 controls pre-let-7 maturation during neural stem-cell commitment
    • Rybak A., Fuchs H., Smirnova L., Brandt C., Pohl E.E., Nitsch R., and Wulczyn F.G. A feedback loop comprising lin-28 and let-7 controls pre-let-7 maturation during neural stem-cell commitment. Nat. Cell Biol. 10 (2008) 987-993
    • (2008) Nat. Cell Biol. , vol.10 , pp. 987-993
    • Rybak, A.1    Fuchs, H.2    Smirnova, L.3    Brandt, C.4    Pohl, E.E.5    Nitsch, R.6    Wulczyn, F.G.7
  • 49
    • 19644400971 scopus 로고    scopus 로고
    • Uridine addition after microRNA-directed cleavage
    • Shen B., and Goodman H.M. Uridine addition after microRNA-directed cleavage. Science 306 (2004) 997
    • (2004) Science , vol.306 , pp. 997
    • Shen, B.1    Goodman, H.M.2
  • 50
    • 33751297741 scopus 로고    scopus 로고
    • The Cid1 family of non-canonical poly(A) polymerases
    • Stevenson A.L., and Norbury C.J. The Cid1 family of non-canonical poly(A) polymerases. Yeast 23 (2006) 991-1000
    • (2006) Yeast , vol.23 , pp. 991-1000
    • Stevenson, A.L.1    Norbury, C.J.2
  • 55
    • 0037335898 scopus 로고    scopus 로고
    • Biochemical characterization of a U6 small nuclear RNA-specific terminal uridylyltransferase
    • Trippe R., Richly H., and Benecke B.J. Biochemical characterization of a U6 small nuclear RNA-specific terminal uridylyltransferase. Eur. J. Biochem. 270 (2003) 971-980
    • (2003) Eur. J. Biochem. , vol.270 , pp. 971-980
    • Trippe, R.1    Richly, H.2    Benecke, B.J.3
  • 56
    • 33746489955 scopus 로고    scopus 로고
    • Identification, cloning, and functional analysis of the human U6 snRNA-specific terminal uridylyl transferase
    • Trippe R., Guschina E., Hossbach M., Urlaub H., Luhrmann R., and Benecke B.J. Identification, cloning, and functional analysis of the human U6 snRNA-specific terminal uridylyl transferase. RNA 12 (2006) 1494-1504
    • (2006) RNA , vol.12 , pp. 1494-1504
    • Trippe, R.1    Guschina, E.2    Hossbach, M.3    Urlaub, H.4    Luhrmann, R.5    Benecke, B.J.6
  • 57
    • 40849108663 scopus 로고    scopus 로고
    • Selective blockade of microRNA processing by Lin28
    • Viswanathan S.R., Daley G.Q., and Gregory R.I. Selective blockade of microRNA processing by Lin28. Science 320 (2008) 97-100
    • (2008) Science , vol.320 , pp. 97-100
    • Viswanathan, S.R.1    Daley, G.Q.2    Gregory, R.I.3
  • 58
    • 0034003545 scopus 로고    scopus 로고
    • Cid1, a fission yeast protein required for S-M checkpoint control when DNA polymerase delta or epsilon is inactivated
    • Wang S.W., Toda T., MacCallum R., Harris A.L., and Norbury C. Cid1, a fission yeast protein required for S-M checkpoint control when DNA polymerase delta or epsilon is inactivated. Mol. Cell. Biol. 20 (2000) 3234-3244
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 3234-3244
    • Wang, S.W.1    Toda, T.2    MacCallum, R.3    Harris, A.L.4    Norbury, C.5
  • 59
    • 80055101776 scopus 로고    scopus 로고
    • In vitro differentiation of mouse embryonic stem (mES) cells using the hanging drop method
    • Wang X., and Yang P. In vitro differentiation of mouse embryonic stem (mES) cells using the hanging drop method. J. Vis. Exp. 17 (2008). http://www.jove.com/index/details.stp?id=825
    • (2008) J. Vis. Exp. , vol.17
    • Wang, X.1    Yang, P.2
  • 60
    • 40549087668 scopus 로고    scopus 로고
    • Molecular biology. A tail tale for U
    • Wickens M., and Kwak J.E. Molecular biology. A tail tale for U. Science 319 (2008) 1344-1345
    • (2008) Science , vol.319 , pp. 1344-1345
    • Wickens, M.1    Kwak, J.E.2
  • 61
    • 38149137954 scopus 로고    scopus 로고
    • New ways to meet your (3′) end oligouridylation as a step on the path to destruction
    • Wilusz C.J., and Wilusz J. New ways to meet your (3′) end oligouridylation as a step on the path to destruction. Genes Dev. 22 (2008) 1-7
    • (2008) Genes Dev. , vol.22 , pp. 1-7
    • Wilusz, C.J.1    Wilusz, J.2
  • 63
    • 0344013522 scopus 로고    scopus 로고
    • Temporally regulated expression of Lin-28 in diverse tissues of the developing mouse
    • Yang D.H., and Moss E.G. Temporally regulated expression of Lin-28 in diverse tissues of the developing mouse. Gene Expr. Patterns 3 (2003) 719-726
    • (2003) Gene Expr. Patterns , vol.3 , pp. 719-726
    • Yang, D.H.1    Moss, E.G.2
  • 64
    • 0347361541 scopus 로고    scopus 로고
    • Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs
    • Yi R., Qin Y., Macara I.G., and Cullen B.R. Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs. Genes Dev. 17 (2003) 3011-3016
    • (2003) Genes Dev. , vol.17 , pp. 3011-3016
    • Yi, R.1    Qin, Y.2    Macara, I.G.3    Cullen, B.R.4


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