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Volumn 181, Issue 5, 2020, Pages 1016-1035.e19

SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues

(115)  Ziegler, Carly G K a,b,c,d,e   Allon, Samuel J b,c,d   Nyquist, Sarah K b,c,d,f   Mbano, Ian M g,h   Miao, Vincent N a,b,c,d   Tzouanas, Constantine N a,b,c,d   Cao, Yuming i   Yousif, Ashraf S c   Bals, Julia c   Hauser, Blake M a,c   Feldman, Jared a,c   Muus, Christoph d,j   Wadsworth, Marc H b,c,d   Kazer, Samuel W b,c,d   Hughes, Travis K a,c,d   Doran, Benjamin b,c,d,k   Gatter, G James b,c,d   Vukovic, Marko b,c,d   Taliaferro, Faith d,k   Mead, Benjamin E b,c,d   more..


Author keywords

ACE2; COVID 19; human; influenza; interferon; ISG; mouse; non human primate; SARS CoV 2; scRNA seq

Indexed keywords

ANGIOTENSIN CONVERTING ENZYME 2; DIPEPTIDYL CARBOXYPEPTIDASE; INTERFERON; SERINE PROTEINASE; TMPRSS2 PROTEIN, HUMAN; VIRUS RECEPTOR;

EID: 85084425299     PISSN: 00928674     EISSN: 10974172     Source Type: Journal    
DOI: 10.1016/j.cell.2020.04.035     Document Type: Article
Times cited : (1854)

References (144)
  • 1
    • 0033912858 scopus 로고    scopus 로고
    • Cloning and mutagenesis of the murine gammaherpesvirus 68 genome as an infectious bacterial artificial chromosome
    • Adler, H., Messerle, M., Wagner, M., Koszinowski, U.H., Cloning and mutagenesis of the murine gammaherpesvirus 68 genome as an infectious bacterial artificial chromosome. J. Virol. 74 (2000), 6964–6974.
    • (2000) J. Virol. , vol.74 , pp. 6964-6974
    • Adler, H.1    Messerle, M.2    Wagner, M.3    Koszinowski, U.H.4
  • 4
    • 85017002818 scopus 로고    scopus 로고
    • IFITM-Family Proteins: The Cell's First Line of Antiviral Defense
    • Bailey, C.C., Zhong, G., Huang, I.C., Farzan, M., IFITM-Family Proteins: The Cell's First Line of Antiviral Defense. Annu. Rev. Virol. 1 (2014), 261–283.
    • (2014) Annu. Rev. Virol. , vol.1 , pp. 261-283
    • Bailey, C.C.1    Zhong, G.2    Huang, I.C.3    Farzan, M.4
  • 7
    • 84890862021 scopus 로고    scopus 로고
    • Activation of influenza viruses by proteases from host cells and bacteria in the human airway epithelium
    • Böttcher-Friebertshäuser, E., Klenk, H.D., Garten, W., Activation of influenza viruses by proteases from host cells and bacteria in the human airway epithelium. Pathog. Dis. 69 (2013), 87–100.
    • (2013) Pathog. Dis. , vol.69 , pp. 87-100
    • Böttcher-Friebertshäuser, E.1    Klenk, H.D.2    Garten, W.3
  • 8
    • 85083161835 scopus 로고    scopus 로고
    • Non-neural expression of SARS-CoV-2 entry genes in the olfactory epithelium suggests mechanisms underlying anosmia in COVID-19 patients
    • Brann, D., Tsukahara, T., Weinreb, C., Logan, D.W., Datta, S.R., Non-neural expression of SARS-CoV-2 entry genes in the olfactory epithelium suggests mechanisms underlying anosmia in COVID-19 patients. bioRxiv, 2020, 10.1101/2020.03.25.009084.
    • (2020) bioRxiv
    • Brann, D.1    Tsukahara, T.2    Weinreb, C.3    Logan, D.W.4    Datta, S.R.5
  • 9
    • 85079563205 scopus 로고    scopus 로고
    • Furin-mediated protein processing in infectious diseases and cancer
    • Braun, E., Sauter, D., Furin-mediated protein processing in infectious diseases and cancer. Clin. Transl. Immunology, 8, 2019, e1073.
    • (2019) Clin. Transl. Immunology , vol.8 , pp. e1073
    • Braun, E.1    Sauter, D.2
  • 10
    • 85076372169 scopus 로고    scopus 로고
    • Type III interferons: Balancing tissue tolerance and resistance to pathogen invasion
    • Broggi, A., Granucci, F., Zanoni, I., Type III interferons: Balancing tissue tolerance and resistance to pathogen invasion. J. Exp. Med., 217, 2020, e20190295.
    • (2020) J. Exp. Med. , vol.217 , pp. e20190295
    • Broggi, A.1    Granucci, F.2    Zanoni, I.3
  • 11
    • 69949118724 scopus 로고    scopus 로고
    • Type II transmembrane serine proteases
    • Bugge, T.H., Antalis, T.M., Wu, Q., Type II transmembrane serine proteases. J. Biol. Chem. 284 (2009), 23177–23181.
    • (2009) J. Biol. Chem. , vol.284 , pp. 23177-23181
    • Bugge, T.H.1    Antalis, T.M.2    Wu, Q.3
  • 12
    • 85046298440 scopus 로고    scopus 로고
    • Integrating single-cell transcriptomic data across different conditions, technologies, and species
    • Butler, A., Hoffman, P., Smibert, P., Papalexi, E., Satija, R., Integrating single-cell transcriptomic data across different conditions, technologies, and species. Nat. Biotechnol. 36 (2018), 411–420.
    • (2018) Nat. Biotechnol. , vol.36 , pp. 411-420
    • Butler, A.1    Hoffman, P.2    Smibert, P.3    Papalexi, E.4    Satija, R.5
  • 14
    • 85018428316 scopus 로고    scopus 로고
    • Pathogenic human coronavirus infections: causes and consequences of cytokine storm and immunopathology
    • Channappanavar, R., Perlman, S., Pathogenic human coronavirus infections: causes and consequences of cytokine storm and immunopathology. Semin. Immunopathol. 39 (2017), 529–539.
    • (2017) Semin. Immunopathol. , vol.39 , pp. 529-539
    • Channappanavar, R.1    Perlman, S.2
  • 15
    • 85012027074 scopus 로고    scopus 로고
    • Dysregulated Type I Interferon and Inflammatory Monocyte-Macrophage Responses Cause Lethal Pneumonia in SARS-CoV-Infected Mice
    • Channappanavar, R., Fehr, A.R., Vijay, R., Mack, M., Zhao, J., Meyerholz, D.K., Perlman, S., Dysregulated Type I Interferon and Inflammatory Monocyte-Macrophage Responses Cause Lethal Pneumonia in SARS-CoV-Infected Mice. Cell Host Microbe 19 (2016), 181–193.
    • (2016) Cell Host Microbe , vol.19 , pp. 181-193
    • Channappanavar, R.1    Fehr, A.R.2    Vijay, R.3    Mack, M.4    Zhao, J.5    Meyerholz, D.K.6    Perlman, S.7
  • 17
    • 85084640375 scopus 로고    scopus 로고
    • The Seattle Flu Study: a multi-arm community-based prospective study protocol for assessing influenza prevalence, transmission, and genomic epidemiology
    • Chu, H.Y., Boeckh, M., Englund, J.A., Famulare, M., Lutz, B.R., Nickerson, D.A., Rieder, M.J., Starita, L.M., Adler, A., Brandstetter, E., et al. The Seattle Flu Study: a multi-arm community-based prospective study protocol for assessing influenza prevalence, transmission, and genomic epidemiology. medRxiv, 2020, 10.1101/2020.03.02.20029595.
    • (2020) medRxiv
    • Chu, H.Y.1    Boeckh, M.2    Englund, J.A.3    Famulare, M.4    Lutz, B.R.5    Nickerson, D.A.6    Rieder, M.J.7    Starita, L.M.8    Adler, A.9    Brandstetter, E.10
  • 19
    • 85082561475 scopus 로고    scopus 로고
    • The species Severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2
    • Coronaviridae Study Group of the International Committee on Taxonomy of V. The species Severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2. Nat. Microbiol., 2020, 10.1038/s41564-020-0695-z.
    • (2020) Nat. Microbiol.
  • 20
    • 85079394767 scopus 로고    scopus 로고
    • The spike glycoprotein of the new coronavirus 2019-nCoV contains a furin-like cleavage site absent in CoV of the same clade
    • Coutard, B., Valle, C., de Lamballerie, X., Canard, B., Seidah, N.G., Decroly, E., The spike glycoprotein of the new coronavirus 2019-nCoV contains a furin-like cleavage site absent in CoV of the same clade. Antiviral Res., 176, 2020, 104742.
    • (2020) Antiviral Res. , vol.176 , pp. 104742
    • Coutard, B.1    Valle, C.2    de Lamballerie, X.3    Canard, B.4    Seidah, N.G.5    Decroly, E.6
  • 22
    • 84926477139 scopus 로고    scopus 로고
    • Disease-promoting effects of type I interferons in viral, bacterial, and coinfections
    • Davidson, S., Maini, M.K., Wack, A., Disease-promoting effects of type I interferons in viral, bacterial, and coinfections. J. Interferon Cytokine Res. 35 (2015), 252–264.
    • (2015) J. Interferon Cytokine Res. , vol.35 , pp. 252-264
    • Davidson, S.1    Maini, M.K.2    Wack, A.3
  • 23
    • 33748708412 scopus 로고    scopus 로고
    • Interferon-gamma and interleukin-4 downregulate expression of the SARS coronavirus receptor ACE2 in Vero E6 cells
    • de Lang, A., Osterhaus, A.D., Haagmans, B.L., Interferon-gamma and interleukin-4 downregulate expression of the SARS coronavirus receptor ACE2 in Vero E6 cells. Virology 353 (2006), 474–481.
    • (2006) Virology , vol.353 , pp. 474-481
    • de Lang, A.1    Osterhaus, A.D.2    Haagmans, B.L.3
  • 24
    • 0025915238 scopus 로고
    • Novel genes for potential ligand-binding proteins in subregions of the olfactory mucosa
    • Dear, T.N., Boehm, T., Keverne, E.B., Rabbitts, T.H., Novel genes for potential ligand-binding proteins in subregions of the olfactory mucosa. EMBO J. 10 (1991), 2813–2819.
    • (1991) EMBO J. , vol.10 , pp. 2813-2819
    • Dear, T.N.1    Boehm, T.2    Keverne, E.B.3    Rabbitts, T.H.4
  • 25
    • 85008384523 scopus 로고    scopus 로고
    • The interferon paradox: can inhibiting an antiviral mechanism advance an HIV cure?
    • Deeks, S.G., Odorizzi, P.M., Sekaly, R.P., The interferon paradox: can inhibiting an antiviral mechanism advance an HIV cure?. J. Clin. Invest. 127 (2017), 103–105.
    • (2017) J. Clin. Invest. , vol.127 , pp. 103-105
    • Deeks, S.G.1    Odorizzi, P.M.2    Sekaly, R.P.3
  • 27
    • 2642544842 scopus 로고    scopus 로고
    • Organ distribution of severe acute respiratory syndrome (SARS) associated coronavirus (SARS-CoV) in SARS patients: implications for pathogenesis and virus transmission pathways
    • Ding, Y., He, L., Zhang, Q., Huang, Z., Che, X., Hou, J., Wang, H., Shen, H., Qiu, L., Li, Z., et al. Organ distribution of severe acute respiratory syndrome (SARS) associated coronavirus (SARS-CoV) in SARS patients: implications for pathogenesis and virus transmission pathways. J. Pathol. 203 (2004), 622–630.
    • (2004) J. Pathol. , vol.203 , pp. 622-630
    • Ding, Y.1    He, L.2    Zhang, Q.3    Huang, Z.4    Che, X.5    Hou, J.6    Wang, H.7    Shen, H.8    Qiu, L.9    Li, Z.10
  • 28
    • 85081983133 scopus 로고    scopus 로고
    • An interactive web-based dashboard to track COVID-19 in real time
    • S1473-3099(20)30120-1
    • Dong, E., Du, H., Gardner, L., An interactive web-based dashboard to track COVID-19 in real time. Lancet Infect. Dis., 2020 S1473-3099(20)30120-1.
    • (2020) Lancet Infect. Dis.
    • Dong, E.1    Du, H.2    Gardner, L.3
  • 29
    • 85082404716 scopus 로고    scopus 로고
    • Discovering drugs to treat coronavirus disease 2019 (COVID-19)
    • Dong, L., Hu, S., Gao, J., Discovering drugs to treat coronavirus disease 2019 (COVID-19). Drug Discov. Ther. 14 (2020), 58–60.
    • (2020) Drug Discov. Ther. , vol.14 , pp. 58-60
    • Dong, L.1    Hu, S.2    Gao, J.3
  • 30
    • 84881507427 scopus 로고    scopus 로고
    • An effective manual deboning method to prepare intact mouse nasal tissue with preserved anatomical organization
    • Dunston, D., Ashby, S., Krosnowski, K., Ogura, T., Lin, W., An effective manual deboning method to prepare intact mouse nasal tissue with preserved anatomical organization. J. Vis. Exp.(78), 2013, 10.3791/50538.
    • (2013) J. Vis. Exp. , Issue.78
    • Dunston, D.1    Ashby, S.2    Krosnowski, K.3    Ogura, T.4    Lin, W.5
  • 34
    • 85071995842 scopus 로고    scopus 로고
    • Human Coronavirus: Host-Pathogen Interaction
    • Fung, T.S., Liu, D.X., Human Coronavirus: Host-Pathogen Interaction. Annu. Rev. Microbiol. 73 (2019), 529–557.
    • (2019) Annu. Rev. Microbiol. , vol.73 , pp. 529-557
    • Fung, T.S.1    Liu, D.X.2
  • 39
    • 79954628266 scopus 로고    scopus 로고
    • Evidence that TMPRSS2 activates the severe acute respiratory syndrome coronavirus spike protein for membrane fusion and reduces viral control by the humoral immune response
    • Glowacka, I., Bertram, S., Müller, M.A., Allen, P., Soilleux, E., Pfefferle, S., Steffen, I., Tsegaye, T.S., He, Y., Gnirss, K., et al. Evidence that TMPRSS2 activates the severe acute respiratory syndrome coronavirus spike protein for membrane fusion and reduces viral control by the humoral immune response. J. Virol. 85 (2011), 4122–4134.
    • (2011) J. Virol. , vol.85 , pp. 4122-4134
    • Glowacka, I.1    Bertram, S.2    Müller, M.A.3    Allen, P.4    Soilleux, E.5    Pfefferle, S.6    Steffen, I.7    Tsegaye, T.S.8    He, Y.9    Gnirss, K.10
  • 40
    • 85062029394 scopus 로고    scopus 로고
    • Type III interferon signaling restricts enterovirus 71 infection of goblet cells
    • Good, C., Wells, A.I., Coyne, C.B., Type III interferon signaling restricts enterovirus 71 infection of goblet cells. Sci Adv., 2019, 10.1126/sciadv.aau4255.
    • (2019) Sci Adv.
    • Good, C.1    Wells, A.I.2    Coyne, C.B.3
  • 42
    • 83655162842 scopus 로고    scopus 로고
    • The cell biology of receptor-mediated virus entry
    • Grove, J., Marsh, M., The cell biology of receptor-mediated virus entry. J. Cell Biol. 195 (2011), 1071–1082.
    • (2011) J. Cell Biol. , vol.195 , pp. 1071-1082
    • Grove, J.1    Marsh, M.2
  • 44
    • 23244451497 scopus 로고    scopus 로고
    • Activity and regulation of alpha interferon in respiratory syncytial virus and human metapneumovirus experimental infections
    • Guerrero-Plata, A., Baron, S., Poast, J.S., Adegboyega, P.A., Casola, A., Garofalo, R.P., Activity and regulation of alpha interferon in respiratory syncytial virus and human metapneumovirus experimental infections. J. Virol. 79 (2005), 10190–10199.
    • (2005) J. Virol. , vol.79 , pp. 10190-10199
    • Guerrero-Plata, A.1    Baron, S.2    Poast, J.S.3    Adegboyega, P.A.4    Casola, A.5    Garofalo, R.P.6
  • 46
    • 2642539225 scopus 로고    scopus 로고
    • Tissue distribution of ACE2 protein, the functional receptor for SARS coronavirus. A first step in understanding SARS pathogenesis
    • Hamming, I., Timens, W., Bulthuis, M.L., Lely, A.T., Navis, G., van Goor, H., Tissue distribution of ACE2 protein, the functional receptor for SARS coronavirus. A first step in understanding SARS pathogenesis. J. Pathol. 203 (2004), 631–637.
    • (2004) J. Pathol. , vol.203 , pp. 631-637
    • Hamming, I.1    Timens, W.2    Bulthuis, M.L.3    Lely, A.T.4    Navis, G.5    van Goor, H.6
  • 47
    • 0037021454 scopus 로고    scopus 로고
    • Quantitative mRNA expression profiling of ACE 2, a novel homologue of angiotensin converting enzyme
    • Harmer, D., Gilbert, M., Borman, R., Clark, K.L., Quantitative mRNA expression profiling of ACE 2, a novel homologue of angiotensin converting enzyme. FEBS Lett. 532 (2002), 107–110.
    • (2002) FEBS Lett. , vol.532 , pp. 107-110
    • Harmer, D.1    Gilbert, M.2    Borman, R.3    Clark, K.L.4
  • 49
    • 2942548115 scopus 로고    scopus 로고
    • Susceptibility to SARS coronavirus S protein-driven infection correlates with expression of angiotensin converting enzyme 2 and infection can be blocked by soluble receptor
    • Hofmann, H., Geier, M., Marzi, A., Krumbiegel, M., Peipp, M., Fey, G.H., Gramberg, T., Pöhlmann, S., Susceptibility to SARS coronavirus S protein-driven infection correlates with expression of angiotensin converting enzyme 2 and infection can be blocked by soluble receptor. Biochem. Biophys. Res. Commun. 319 (2004), 1216–1221.
    • (2004) Biochem. Biophys. Res. Commun. , vol.319 , pp. 1216-1221
    • Hofmann, H.1    Geier, M.2    Marzi, A.3    Krumbiegel, M.4    Peipp, M.5    Fey, G.H.6    Gramberg, T.7    Pöhlmann, S.8
  • 50
    • 85045380401 scopus 로고    scopus 로고
    • Adenovirus Infection of Human Enteroids Reveals Interferon Sensitivity and Preferential Infection of Goblet Cells
    • Holly, M.K., Smith, J.G., Adenovirus Infection of Human Enteroids Reveals Interferon Sensitivity and Preferential Infection of Goblet Cells. J. Virol., 92, 2018, e00250-18.
    • (2018) J. Virol. , vol.92 , pp. e00250-18
    • Holly, M.K.1    Smith, J.G.2
  • 52
    • 84898731336 scopus 로고    scopus 로고
    • Angiotensin II plasma levels are linked to disease severity and predict fatal outcomes in H7N9-infected patients
    • Huang, F., Guo, J., Zou, Z., Liu, J., Cao, B., Zhang, S., Li, H., Wang, W., Sheng, M., Liu, S., et al. Angiotensin II plasma levels are linked to disease severity and predict fatal outcomes in H7N9-infected patients. Nat. Commun., 5, 2014, 3595.
    • (2014) Nat. Commun. , vol.5 , pp. 3595
    • Huang, F.1    Guo, J.2    Zou, Z.3    Liu, J.4    Cao, B.5    Zhang, S.6    Li, H.7    Wang, W.8    Sheng, M.9    Liu, S.10
  • 53
    • 85078262578 scopus 로고    scopus 로고
    • Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China
    • Huang, C., Wang, Y., Li, X., Ren, L., Zhao, J., Hu, Y., Zhang, L., Fan, G., Xu, J., Gu, X., et al. Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China. Lancet 395 (2020), 497–506.
    • (2020) Lancet , vol.395 , pp. 497-506
    • Huang, C.1    Wang, Y.2    Li, X.3    Ren, L.4    Zhao, J.5    Hu, Y.6    Zhang, L.7    Fan, G.8    Xu, J.9    Gu, X.10
  • 56
    • 84899503850 scopus 로고    scopus 로고
    • Innate immunity to influenza virus infection
    • Iwasaki, A., Pillai, P.S., Innate immunity to influenza virus infection. Nat. Rev. Immunol. 14 (2014), 315–328.
    • (2014) Nat. Rev. Immunol. , vol.14 , pp. 315-328
    • Iwasaki, A.1    Pillai, P.S.2
  • 57
    • 84997327229 scopus 로고    scopus 로고
    • Early local immune defences in the respiratory tract
    • Iwasaki, A., Foxman, E.F., Molony, R.D., Early local immune defences in the respiratory tract. Nat. Rev. Immunol. 17 (2017), 7–20.
    • (2017) Nat. Rev. Immunol. , vol.17 , pp. 7-20
    • Iwasaki, A.1    Foxman, E.F.2    Molony, R.D.3
  • 58
    • 85062601344 scopus 로고    scopus 로고
    • TMPRSS2 Contributes to Virus Spread and Immunopathology in the Airways of Murine Models after Coronavirus Infection
    • Iwata-Yoshikawa, N., Okamura, T., Shimizu, Y., Hasegawa, H., Takeda, M., Nagata, N., TMPRSS2 Contributes to Virus Spread and Immunopathology in the Airways of Murine Models after Coronavirus Infection. J. Virol., 93, 2019, e01815-18.
    • (2019) J. Virol. , vol.93 , pp. e01815-18
    • Iwata-Yoshikawa, N.1    Okamura, T.2    Shimizu, Y.3    Hasegawa, H.4    Takeda, M.5    Nagata, N.6
  • 60
    • 84957601858 scopus 로고    scopus 로고
    • Coronaviruses and the human airway: a universal system for virus-host interaction studies
    • Jonsdottir, H.R., Dijkman, R., Coronaviruses and the human airway: a universal system for virus-host interaction studies. Virol. J., 13, 2016, 24.
    • (2016) Virol. J. , vol.13 , pp. 24
    • Jonsdottir, H.R.1    Dijkman, R.2
  • 63
    • 84903574951 scopus 로고    scopus 로고
    • Bayesian approach to single-cell differential expression analysis
    • Kharchenko, P.V., Silberstein, L., Scadden, D.T., Bayesian approach to single-cell differential expression analysis. Nat. Methods 11 (2014), 740–742.
    • (2014) Nat. Methods , vol.11 , pp. 740-742
    • Kharchenko, P.V.1    Silberstein, L.2    Scadden, D.T.3
  • 64
    • 85054893218 scopus 로고    scopus 로고
    • Phosphorylation of TRIM28 Enhances the Expression of IFN-β and Proinflammatory Cytokines During HPAIV Infection of Human Lung Epithelial Cells
    • Krischuns, T., Günl, F., Henschel, L., Binder, M., Willemsen, J., Schloer, S., Rescher, U., Gerlt, V., Zimmer, G., Nordhoff, C., et al. Phosphorylation of TRIM28 Enhances the Expression of IFN-β and Proinflammatory Cytokines During HPAIV Infection of Human Lung Epithelial Cells. Front. Immunol., 9, 2018, 2229, 10.3389/fimmu.2018.02229.
    • (2018) Front. Immunol. , vol.9 , pp. 2229
    • Krischuns, T.1    Günl, F.2    Henschel, L.3    Binder, M.4    Willemsen, J.5    Schloer, S.6    Rescher, U.7    Gerlt, V.8    Zimmer, G.9    Nordhoff, C.10
  • 65
    • 23844463115 scopus 로고    scopus 로고
    • A crucial role of angiotensin converting enzyme 2 (ACE2) in SARS coronavirus-induced lung injury
    • Kuba, K., Imai, Y., Rao, S., Gao, H., Guo, F., Guan, B., Huan, Y., Yang, P., Zhang, Y., Deng, W., et al. A crucial role of angiotensin converting enzyme 2 (ACE2) in SARS coronavirus-induced lung injury. Nat. Med. 11 (2005), 875–879.
    • (2005) Nat. Med. , vol.11 , pp. 875-879
    • Kuba, K.1    Imai, Y.2    Rao, S.3    Gao, H.4    Guo, F.5    Guan, B.6    Huan, Y.7    Yang, P.8    Zhang, Y.9    Deng, W.10
  • 66
    • 85082189367 scopus 로고    scopus 로고
    • Early dynamics of transmission and control of COVID-19: a mathematical modelling study
    • Kucharski, A.J., Russell, T.W., Diamond, C., Liu, Y., Edmunds, J., Funk, S., Eggo, R.M., Centre for Mathematical Modelling of Infectious Diseases COVID-19 working group. Early dynamics of transmission and control of COVID-19: a mathematical modelling study. Lancet Infect. Dis., 2020, 10.1016/S1473-3099(20)30144-4.
    • (2020) Lancet Infect. Dis.
    • Kucharski, A.J.1    Russell, T.W.2    Diamond, C.3    Liu, Y.4    Edmunds, J.5    Funk, S.6    Eggo, R.M.7
  • 68
    • 85081380710 scopus 로고    scopus 로고
    • CT Imaging of the 2019 Novel Coronavirus (2019-nCoV) Pneumonia
    • Lei, J., Li, J., Li, X., Qi, X., CT Imaging of the 2019 Novel Coronavirus (2019-nCoV) Pneumonia. Radiology, 295, 2020, 18.
    • (2020) Radiology , vol.295 , pp. 18
    • Lei, J.1    Li, J.2    Li, X.3    Qi, X.4
  • 69
    • 85079767277 scopus 로고    scopus 로고
    • Functional assessment of cell entry and receptor usage for SARS-CoV-2 and other lineage B betacoronaviruses
    • Letko, M., Marzi, A., Munster, V., Functional assessment of cell entry and receptor usage for SARS-CoV-2 and other lineage B betacoronaviruses. Nat. Microbiol. 5 (2020), 562–569.
    • (2020) Nat. Microbiol. , vol.5 , pp. 562-569
    • Letko, M.1    Marzi, A.2    Munster, V.3
  • 70
    • 85079755488 scopus 로고    scopus 로고
    • Therapeutic options for the 2019 novel coronavirus (2019-nCoV)
    • Li, G., De Clercq, E., Therapeutic options for the 2019 novel coronavirus (2019-nCoV). Nat. Rev. Drug Discov. 19 (2020), 149–150.
    • (2020) Nat. Rev. Drug Discov. , vol.19 , pp. 149-150
    • Li, G.1    De Clercq, E.2
  • 72
    • 85083046144 scopus 로고    scopus 로고
    • The landscape of lung bronchoalveolar immune cells in COVID-19 revealed by single-cell RNA sequencing
    • Liao, M., Liu, Y., Yuan, J., Wen, Y., Xu, G., Zhao, J., Chen, L., Li, J., Wang, X., Wang, F., et al. The landscape of lung bronchoalveolar immune cells in COVID-19 revealed by single-cell RNA sequencing. medRxiv, 2020, 10.1101/2020.02.23.20026690.
    • (2020) medRxiv
    • Liao, M.1    Liu, Y.2    Yuan, J.3    Wen, Y.4    Xu, G.5    Zhao, J.6    Chen, L.7    Li, J.8    Wang, X.9    Wang, F.10
  • 73
    • 85078741591 scopus 로고    scopus 로고
    • Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding
    • Lu, R., Zhao, X., Li, J., Niu, P., Yang, B., Wu, H., Wang, W., Song, H., Huang, B., Zhu, N., et al. Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding. Lancet 395 (2020), 565–574.
    • (2020) Lancet , vol.395 , pp. 565-574
    • Lu, R.1    Zhao, X.2    Li, J.3    Niu, P.4    Yang, B.5    Wu, H.6    Wang, W.7    Song, H.8    Huang, B.9    Zhu, N.10
  • 74
    • 85083529393 scopus 로고    scopus 로고
    • SARS-CoV-2 receptor ACE2 and TMPRSS2 are predominantly expressed in a transient secretory cell type in subsegmental bronchial branches
    • Lukassen, S., Chua, R.L., Trefzer, T., Kahn, N.C., Schneider, M.A., Muley, T., Winter, H., Meister, M., Veith, C., Boots, A.W., et al. SARS-CoV-2 receptor ACE2 and TMPRSS2 are predominantly expressed in a transient secretory cell type in subsegmental bronchial branches. bioRxiv, 2020, 10.1101/2020.03.13.991455.
    • (2020) bioRxiv
    • Lukassen, S.1    Chua, R.L.2    Trefzer, T.3    Kahn, N.C.4    Schneider, M.A.5    Muley, T.6    Winter, H.7    Meister, M.8    Veith, C.9    Boots, A.W.10
  • 75
    • 85010931059 scopus 로고    scopus 로고
    • A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor
    • Lun, A.T., McCarthy, D.J., Marioni, J.C., A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor. F1000Res., 5, 2016, 2122, 10.12688/f1000research.9501.2.
    • (2016) F1000Res. , vol.5 , pp. 2122
    • Lun, A.T.1    McCarthy, D.J.2    Marioni, J.C.3
  • 78
    • 85022333849 scopus 로고    scopus 로고
    • Digitally Barcoding Mycobacterium tuberculosis Reveals In Vivo Infection Dynamics in the Macaque Model of Tuberculosis
    • Martin, C.J., Cadena, A.M., Leung, V.W., Lin, P.L., Maiello, P., Hicks, N., Chase, M.R., Flynn, J.L., Fortune, S.M., Digitally Barcoding Mycobacterium tuberculosis Reveals In Vivo Infection Dynamics in the Macaque Model of Tuberculosis. MBio, 8, 2017, e00312-17.
    • (2017) MBio , vol.8 , pp. e00312-17
    • Martin, C.J.1    Cadena, A.M.2    Leung, V.W.3    Lin, P.L.4    Maiello, P.5    Hicks, N.6    Chase, M.R.7    Flynn, J.L.8    Fortune, S.M.9
  • 80
    • 78649407547 scopus 로고    scopus 로고
    • Efficient activation of the severe acute respiratory syndrome coronavirus spike protein by the transmembrane protease TMPRSS2
    • Matsuyama, S., Nagata, N., Shirato, K., Kawase, M., Takeda, M., Taguchi, F., Efficient activation of the severe acute respiratory syndrome coronavirus spike protein by the transmembrane protease TMPRSS2. J. Virol. 84 (2010), 12658–12664.
    • (2010) J. Virol. , vol.84 , pp. 12658-12664
    • Matsuyama, S.1    Nagata, N.2    Shirato, K.3    Kawase, M.4    Takeda, M.5    Taguchi, F.6
  • 83
    • 85063571835 scopus 로고    scopus 로고
    • All models are wrong, but some organoids may be useful
    • Mead, B.E., Karp, J.M., All models are wrong, but some organoids may be useful. Genome Biol., 20, 2019, 66, 10.1186/s13059-019-1677-4.
    • (2019) Genome Biol. , vol.20 , pp. 66
    • Mead, B.E.1    Karp, J.M.2
  • 85
    • 84857538593 scopus 로고    scopus 로고
    • Disease tolerance as a defense strategy
    • Medzhitov, R., Schneider, D.S., Soares, M.P., Disease tolerance as a defense strategy. Science 335 (2012), 936–941.
    • (2012) Science , vol.335 , pp. 936-941
    • Medzhitov, R.1    Schneider, D.S.2    Soares, M.P.3
  • 86
    • 85083498362 scopus 로고    scopus 로고
    • Inhibition of SARS-CoV-2 infections in engineered human tissues using clinical-grade soluble human ACE2
    • Monteil, V., Kwon, H., Prado, P., Hagelkryus, A., Wimmer, R.A., al, e., Inhibition of SARS-CoV-2 infections in engineered human tissues using clinical-grade soluble human ACE2. Cell, 2020, 10.1016/j.cell.2020.04.004.
    • (2020) Cell
    • Monteil, V.1    Kwon, H.2    Prado, P.3    Hagelkryus, A.4    Wimmer, R.A.5    al, E.6
  • 90
    • 84879689439 scopus 로고    scopus 로고
    • Specificity through cooperation: BATF-IRF interactions control immune-regulatory networks
    • Murphy, T.L., Tussiwand, R., Murphy, K.M., Specificity through cooperation: BATF-IRF interactions control immune-regulatory networks. Nat. Rev. Immunol. 13 (2013), 499–509.
    • (2013) Nat. Rev. Immunol. , vol.13 , pp. 499-509
    • Murphy, T.L.1    Tussiwand, R.2    Murphy, K.M.3
  • 93
    • 85078468946 scopus 로고    scopus 로고
    • Coronavirus Infections-More Than Just the Common Cold
    • Paules, C.I., Marston, H.D., Fauci, A.S., Coronavirus Infections-More Than Just the Common Cold. JAMA, 2020, 10.1001/jama.2020.0757.
    • (2020) JAMA
    • Paules, C.I.1    Marston, H.D.2    Fauci, A.S.3
  • 96
    • 85084651595 scopus 로고    scopus 로고
    • Single cell RNA sequencing of 13 human tissues identify cell types and receptors of human coronaviruses
    • Qi, F., Qian, S., Zhang, S., Zhang, Z., Single cell RNA sequencing of 13 human tissues identify cell types and receptors of human coronaviruses. bioRxiv, 2020, 10.1101/2020.02.16.951913.
    • (2020) bioRxiv
    • Qi, F.1    Qian, S.2    Zhang, S.3    Zhang, Z.4
  • 100
    • 75249087100 scopus 로고    scopus 로고
    • edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
    • Robinson, M.D., McCarthy, D.J., Smyth, G.K., edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26 (2010), 139–140.
    • (2010) Bioinformatics , vol.26 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2    Smyth, G.K.3
  • 102
    • 84903289127 scopus 로고    scopus 로고
    • Machine learning. Clustering by fast search and find of density peaks
    • Rodriguez, A., Laio, A., Machine learning. Clustering by fast search and find of density peaks. Science 344 (2014), 1492–1496.
    • (2014) Science , vol.344 , pp. 1492-1496
    • Rodriguez, A.1    Laio, A.2
  • 105
    • 85043531075 scopus 로고    scopus 로고
    • Extreme heterogeneity of influenza virus infection in single cells
    • Russell, A.B., Trapnell, C., Bloom, J.D., Extreme heterogeneity of influenza virus infection in single cells. eLife, 7, 2018, e32303, 10.7554/eLife.32303.
    • (2018) eLife , vol.7 , pp. e32303
    • Russell, A.B.1    Trapnell, C.2    Bloom, J.D.3
  • 106
    • 5144219591 scopus 로고    scopus 로고
    • Interferon-beta and interferon-gamma synergistically inhibit the replication of severe acute respiratory syndrome-associated coronavirus (SARS-CoV)
    • Sainz, B. Jr., Mossel, E.C., Peters, C.J., Garry, R.F., Interferon-beta and interferon-gamma synergistically inhibit the replication of severe acute respiratory syndrome-associated coronavirus (SARS-CoV). Virology 329 (2004), 11–17.
    • (2004) Virology , vol.329 , pp. 11-17
    • Sainz, B.1    Mossel, E.C.2    Peters, C.J.3    Garry, R.F.4
  • 111
    • 84954358205 scopus 로고    scopus 로고
    • Two ways to survive infection: what resistance and tolerance can teach us about treating infectious diseases
    • Schneider, D.S., Ayres, J.S., Two ways to survive infection: what resistance and tolerance can teach us about treating infectious diseases. Nat. Rev. Immunol. 8 (2008), 889–895.
    • (2008) Nat. Rev. Immunol. , vol.8 , pp. 889-895
    • Schneider, D.S.1    Ayres, J.S.2
  • 112
    • 84896987305 scopus 로고    scopus 로고
    • Interferon-stimulated genes: a complex web of host defenses
    • Schneider, W.M., Chevillotte, M.D., Rice, C.M., Interferon-stimulated genes: a complex web of host defenses. Annu. Rev. Immunol. 32 (2014), 513–545.
    • (2014) Annu. Rev. Immunol. , vol.32 , pp. 513-545
    • Schneider, W.M.1    Chevillotte, M.D.2    Rice, C.M.3
  • 114
    • 78650652994 scopus 로고    scopus 로고
    • A transmembrane serine protease is linked to the severe acute respiratory syndrome coronavirus receptor and activates virus entry
    • Shulla, A., Heald-Sargent, T., Subramanya, G., Zhao, J., Perlman, S., Gallagher, T., A transmembrane serine protease is linked to the severe acute respiratory syndrome coronavirus receptor and activates virus entry. J. Virol. 85 (2011), 873–882.
    • (2011) J. Virol. , vol.85 , pp. 873-882
    • Shulla, A.1    Heald-Sargent, T.2    Subramanya, G.3    Zhao, J.4    Perlman, S.5    Gallagher, T.6
  • 118
    • 33748455338 scopus 로고    scopus 로고
    • Type I interferons in host defense
    • Stetson, D.B., Medzhitov, R., Type I interferons in host defense. Immunity 25 (2006), 373–381.
    • (2006) Immunity , vol.25 , pp. 373-381
    • Stetson, D.B.1    Medzhitov, R.2
  • 120
    • 85083969210 scopus 로고    scopus 로고
    • SARS-CoV-2 Entry Genes Are Most Highly Expressed in Nasal Goblet and Ciliated Cells within Human Airways
    • Sungnak, W., Huang, N., Becavin, C., Berg, M., Network, H.L.B., SARS-CoV-2 Entry Genes Are Most Highly Expressed in Nasal Goblet and Ciliated Cells within Human Airways. Nat. Med., 2020, 10.1038/s41591-020-0868-6.
    • (2020) Nat. Med.
    • Sungnak, W.1    Huang, N.2    Becavin, C.3    Berg, M.4    Network, H.L.B.5
  • 121
    • 85078037691 scopus 로고    scopus 로고
    • Droplet scRNA-seq is not zero-inflated
    • Svensson, V., Droplet scRNA-seq is not zero-inflated. Nat. Biotechnol. 38 (2020), 147–150.
    • (2020) Nat. Biotechnol. , vol.38 , pp. 147-150
    • Svensson, V.1
  • 122
    • 85057055649 scopus 로고    scopus 로고
    • Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons
    • Tepe, B., Hill, M.C., Pekarek, B.T., Hunt, P.J., Martin, T.J., Martin, J.F., Arenkiel, B.R., Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons. Cell Rep, 2018, 10.1016/j.celrep.2018.11.034.
    • (2018) Cell Rep
    • Tepe, B.1    Hill, M.C.2    Pekarek, B.T.3    Hunt, P.J.4    Martin, T.J.5    Martin, J.F.6    Arenkiel, B.R.7
  • 124
    • 85014466687 scopus 로고    scopus 로고
    • Interferons and HIV Infection: The Good, the Bad, and the Ugly
    • Utay, N.S., Douek, D.C., Interferons and HIV Infection: The Good, the Bad, and the Ugly. Pathog. Immun. 1 (2016), 107–116.
    • (2016) Pathog. Immun. , vol.1 , pp. 107-116
    • Utay, N.S.1    Douek, D.C.2
  • 127
    • 85081283286 scopus 로고    scopus 로고
    • Structure, Function, and Antigenicity of the SARS-CoV-2 Spike Glycoprotein
    • Walls, A.C., Park, Y.J., Tortorici, M.A., Wall, A., McGuire, A.T., Veesler, D., Structure, Function, and Antigenicity of the SARS-CoV-2 Spike Glycoprotein. Cell 181 (2020), 281–292.e6.
    • (2020) Cell , vol.181 , pp. 281-292.e6
    • Walls, A.C.1    Park, Y.J.2    Tortorici, M.A.3    Wall, A.4    McGuire, A.T.5    Veesler, D.6
  • 128
    • 85083064176 scopus 로고    scopus 로고
    • Increasing Host Cellular Receptor—Angiotensin-Converting Enzyme 2 (ACE2) Expression by Coronavirus may Facilitate 2019-nCoV Infection
    • Wang, P.-H., Cheng, Y., Increasing Host Cellular Receptor—Angiotensin-Converting Enzyme 2 (ACE2) Expression by Coronavirus may Facilitate 2019-nCoV Infection. bioRxiv, 2020, 10.1101/2020.02.24.963348.
    • (2020) bioRxiv
    • Wang, P.-H.1    Cheng, Y.2
  • 131
    • 85081654989 scopus 로고    scopus 로고
    • Detection of SARS-CoV-2 in Different Types of Clinical Specimens
    • Wang, W., Xu, Y., Gao, R., Lu, R., Han, K., Wu, G., Tan, W., Detection of SARS-CoV-2 in Different Types of Clinical Specimens. JAMA, 2020, 10.1001/jama.2020.3786.
    • (2020) JAMA
    • Wang, W.1    Xu, Y.2    Gao, R.3    Lu, R.4    Han, K.5    Wu, G.6    Tan, W.7
  • 133
    • 85041394976 scopus 로고    scopus 로고
    • SCANPY: large-scale single-cell gene expression data analysis
    • Wolf, F.A., Angerer, P., Theis, F.J., SCANPY: large-scale single-cell gene expression data analysis. Genome Biol., 19, 2018, 15, 10.1186/s13059-017-1382-0.
    • (2018) Genome Biol. , vol.19 , pp. 15
    • Wolf, F.A.1    Angerer, P.2    Theis, F.J.3
  • 136
    • 85079769926 scopus 로고    scopus 로고
    • Single-cell RNA expression profiling of ACE2, the putative receptor of Wuhan 2019-nCoV, in the nasal tissue
    • Wu, C., Zheng, S., Chen, Y., Zheng, M., Single-cell RNA expression profiling of ACE2, the putative receptor of Wuhan 2019-nCoV, in the nasal tissue. medRxiv, 2020, 10.1101/2020.02.11.20022228.
    • (2020) medRxiv
    • Wu, C.1    Zheng, S.2    Chen, Y.3    Zheng, M.4
  • 137
  • 138
    • 85082178543 scopus 로고    scopus 로고
    • Characteristics of pediatric SARS-CoV-2 infection and potential evidence for persistent fecal viral shedding
    • Xu, Y., Li, X., Zhu, B., Liang, H., Fang, C., Gong, Y., Guo, Q., Sun, X., Zhao, D., Shen, J., et al. Characteristics of pediatric SARS-CoV-2 infection and potential evidence for persistent fecal viral shedding. Nat. Med. 26 (2020), 502–505.
    • (2020) Nat. Med. , vol.26 , pp. 502-505
    • Xu, Y.1    Li, X.2    Zhu, B.3    Liang, H.4    Fang, C.5    Gong, Y.6    Guo, Q.7    Sun, X.8    Zhao, D.9    Shen, J.10
  • 139
    • 85050814118 scopus 로고    scopus 로고
    • SoupX removes ambient RNA contamination from droplet based single-cell RNA sequencing data
    • Young, M.D., Behjati, S., SoupX removes ambient RNA contamination from droplet based single-cell RNA sequencing data. bioRxiv, 2020, 10.1101/303727.
    • (2020) bioRxiv
    • Young, M.D.1    Behjati, S.2
  • 140
    • 85079753542 scopus 로고    scopus 로고
    • The digestive system is a potential route of 2019-nCov infection: a bioinformatics analysis based on single-cell transcriptomes
    • Zhang, H., Kang, Z., Gong, H., Xu, D., Wang, J., Li, Z., Cui, X., Xiao, J., Meng, T., Zhou, W., et al. The digestive system is a potential route of 2019-nCov infection: a bioinformatics analysis based on single-cell transcriptomes. bioRxiv, 2020, 10.1101/2020.01.30.927806.
    • (2020) bioRxiv
    • Zhang, H.1    Kang, Z.2    Gong, H.3    Xu, D.4    Wang, J.5    Li, Z.6    Cui, X.7    Xiao, J.8    Meng, T.9    Zhou, W.10
  • 142
    • 3242885894 scopus 로고    scopus 로고
    • Potent inhibition of SARS-associated coronavirus (SCOV) infection and replication by type I interferons (IFN-alpha/beta) but not by type II interferon (IFN-gamma)
    • Zheng, B., He, M.L., Wong, K.L., Lum, C.T., Poon, L.L., Peng, Y., Guan, Y., Lin, M.C., Kung, H.F., Potent inhibition of SARS-associated coronavirus (SCOV) infection and replication by type I interferons (IFN-alpha/beta) but not by type II interferon (IFN-gamma). J. Interferon Cytokine Res. 24 (2004), 388–390.
    • (2004) J. Interferon Cytokine Res. , vol.24 , pp. 388-390
    • Zheng, B.1    He, M.L.2    Wong, K.L.3    Lum, C.T.4    Poon, L.L.5    Peng, Y.6    Guan, Y.7    Lin, M.C.8    Kung, H.F.9
  • 143
    • 84922493649 scopus 로고    scopus 로고
    • Angiotensin-converting enzyme 2 protects from lethal avian influenza A H5N1 infections
    • Zou, Z., Yan, Y., Shu, Y., Gao, R., Sun, Y., Li, X., Ju, X., Liang, Z., Liu, Q., Zhao, Y., et al. Angiotensin-converting enzyme 2 protects from lethal avian influenza A H5N1 infections. Nat. Commun., 5, 2014, 3594.
    • (2014) Nat. Commun. , vol.5 , pp. 3594
    • Zou, Z.1    Yan, Y.2    Shu, Y.3    Gao, R.4    Sun, Y.5    Li, X.6    Ju, X.7    Liang, Z.8    Liu, Q.9    Zhao, Y.10


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