-
1
-
-
85015279062
-
Plasticity in the lung: making and breaking cell identity
-
COI: 1:CAS:528:DC%2BC2sXhtF2hu77L
-
Tata, P. R. & Rajagopal, J. Plasticity in the lung: making and breaking cell identity. Development 144, 755–766 (2017).
-
(2017)
Development
, vol.144
, pp. 755-766
-
-
Tata, P.R.1
Rajagopal, J.2
-
2
-
-
84929684999
-
Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets
-
COI: 1:CAS:528:DC%2BC2MXpt1Sgt7o%3D
-
Macosko, E. Z. et al. Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets. Cell 161, 1202–1214 (2015).
-
(2015)
Cell
, vol.161
, pp. 1202-1214
-
-
Macosko, E.Z.1
-
3
-
-
85051624261
-
A revised airway epithelial hierarchy includes CFTR-expressing ionocytes
-
COI: 1:CAS:528:DC%2BC1cXhsVensrjJ
-
Montoro, D. T. et al. A revised airway epithelial hierarchy includes CFTR-expressing ionocytes. Nature 560, 319–324 (2018).
-
(2018)
Nature
, vol.560
, pp. 319-324
-
-
Montoro, D.T.1
-
4
-
-
85051647983
-
A single-cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte
-
COI: 1:CAS:528:DC%2BC1cXhsVensrnM
-
Plasschaert, L. W. et al. A single-cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte. Nature 560, 377–381 (2018).
-
(2018)
Nature
, vol.560
, pp. 377-381
-
-
Plasschaert, L.W.1
-
5
-
-
13244283293
-
Chemokines and their receptors in the pathogenesis of allergic asthma: progress and perspective
-
COI: 1:CAS:528:DC%2BD2MXntFyjtg%3D%3D
-
Bisset, L. R. & Schmid-Grendelmeier, P. Chemokines and their receptors in the pathogenesis of allergic asthma: progress and perspective. Curr. Opin. Pulm. Med. 11, 35–42 (2005).
-
(2005)
Curr. Opin. Pulm. Med.
, vol.11
, pp. 35-42
-
-
Bisset, L.R.1
Schmid-Grendelmeier, P.2
-
6
-
-
77952575435
-
Synaptotagmin-mediated vesicle fusion regulates cell migration
-
COI: 1:CAS:528:DC%2BC3cXmtFaltbY%3D
-
Colvin, R. A. et al. Synaptotagmin-mediated vesicle fusion regulates cell migration. Nat. Immunol. 11, 495–502 (2010).
-
(2010)
Nat. Immunol.
, vol.11
, pp. 495-502
-
-
Colvin, R.A.1
-
7
-
-
84983294324
-
Protein S is protective in pulmonary fibrosis
-
COI: 1:CAS:528:DC%2BC28Xhtlyls7nJ
-
Urawa, M. et al. Protein S is protective in pulmonary fibrosis. J. Thromb. Haemost. 14, 1588–1599 (2016).
-
(2016)
J. Thromb. Haemost.
, vol.14
, pp. 1588-1599
-
-
Urawa, M.1
-
8
-
-
84943327627
-
+-ATPase activity in lung alveolar epithelial cells
-
COI: 1:CAS:528:DC%2BC2MXhs1WjsL3F
-
+-ATPase activity in lung alveolar epithelial cells. Respir. Physiol. Neurobiol. 220, 54–61 (2016).
-
(2016)
Respir. Physiol. Neurobiol.
, vol.220
, pp. 54-61
-
-
Wujak, A.1
-
9
-
-
85026874971
-
Alpha-1 antitrypsin-deficient macrophages have increased matriptase-mediated proteolytic activity
-
COI: 1:CAS:528:DC%2BC2sXitVSktbzK
-
Krotova, K. et al. Alpha-1 antitrypsin-deficient macrophages have increased matriptase-mediated proteolytic activity. Am. J. Respir. Cell Mol. Biol. 57, 238–247 (2017).
-
(2017)
Am. J. Respir. Cell Mol. Biol.
, vol.57
, pp. 238-247
-
-
Krotova, K.1
-
10
-
-
0040886358
-
S100A12 is expressed exclusively by granulocytes and acts independently from MRP8 and MRP14
-
COI: 1:CAS:528:DyaK1MXmtVWitLk%3D
-
Vogl, T. et al. S100A12 is expressed exclusively by granulocytes and acts independently from MRP8 and MRP14. J. Biol. Chem. 274, 25291–25296 (1999).
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 25291-25296
-
-
Vogl, T.1
-
11
-
-
59749106642
-
LILRA5 is expressed by synovial tissue macrophages in rheumatoid arthritis, selectively induces pro-inflammatory cytokines and IL-10 and is regulated by TNF-α, IL-10 and IFN-γ
-
COI: 1:CAS:528:DC%2BD1MXosVCk
-
Mitchell, A. et al. LILRA5 is expressed by synovial tissue macrophages in rheumatoid arthritis, selectively induces pro-inflammatory cytokines and IL-10 and is regulated by TNF-α, IL-10 and IFN-γ. Eur. J. Immunol. 38, 3459–3473 (2008).
-
(2008)
Eur. J. Immunol.
, vol.38
, pp. 3459-3473
-
-
Mitchell, A.1
-
12
-
-
80055068577
-
Lung dendritic cells at the innate-adaptive immune interface
-
COI: 1:CAS:528:DC%2BC3MXhsFSjsr7E
-
Condon, T. V., Sawyer, R. T., Fenton, M. J. & Riches, D. W. H. Lung dendritic cells at the innate-adaptive immune interface. J. Leukoc. Biol. 90, 883–895 (2011).
-
(2011)
J. Leukoc. Biol.
, vol.90
, pp. 883-895
-
-
Condon, T.V.1
Sawyer, R.T.2
Fenton, M.J.3
Riches, D.W.H.4
-
13
-
-
85054929479
-
The lung in primary immunodeficiencies: new concepts in infection and inflammation
-
Baumann, U., Routes, J. M., Soler-Palacín, P. & Jolles, S. The lung in primary immunodeficiencies: new concepts in infection and inflammation. Front. Immunol. 9, 1837 (2018).
-
(2018)
Front. Immunol.
, vol.9
, pp. 1837
-
-
Baumann, U.1
Routes, J.M.2
Soler-Palacín, P.3
Jolles, S.4
-
15
-
-
84859128562
-
Airway epithelial cells from asthmatic children differentially express proremodeling factors
-
COI: 1:CAS:528:DC%2BC38XkvFSqsbw%3D
-
Lopez-Guisa, J. M. et al. Airway epithelial cells from asthmatic children differentially express proremodeling factors. J. Allergy Clin. Immunol. 129, 990–997.e6 (2012).
-
(2012)
J. Allergy Clin. Immunol.
, vol.129
, pp. 990-997.e6
-
-
Lopez-Guisa, J.M.1
-
16
-
-
84906859849
-
Mitotic asynchrony induces transforming growth factor-β1 secretion from airway epithelium
-
COI: 1:CAS:528:DC%2BC2cXhs1yqt7bJ
-
Alcala, S. E. et al. Mitotic asynchrony induces transforming growth factor-β1 secretion from airway epithelium. Am. J. Respir. Cell Mol. Biol. 51, 363–369 (2014).
-
(2014)
Am. J. Respir. Cell Mol. Biol.
, vol.51
, pp. 363-369
-
-
Alcala, S.E.1
-
17
-
-
84923277893
-
Asthma is not only an airway disease, but also a vascular disease
-
COI: 1:CAS:528:DC%2BC2cXitVWhurfN
-
Harkness, L. M., Ashton, A. W. & Burgess, J. K. Asthma is not only an airway disease, but also a vascular disease. Pharmacol. Ther. 148, 17–33 (2015).
-
(2015)
Pharmacol. Ther.
, vol.148
, pp. 17-33
-
-
Harkness, L.M.1
Ashton, A.W.2
Burgess, J.K.3
-
18
-
-
79551511756
-
Mast cell phenotype, location, and activation in severe asthma. Data from the Severe Asthma Research Program
-
Balzar, S. et al. Mast cell phenotype, location, and activation in severe asthma. Data from the Severe Asthma Research Program. Am. J. Respir. Crit. Care Med. 183, 299–309 (2011).
-
(2011)
Am. J. Respir. Crit. Care Med.
, vol.183
, pp. 299-309
-
-
Balzar, S.1
-
19
-
-
33645059692
-
Evaluation of airway inflammation by quantitative Th1/Th2 cytokine mRNA measurement in sputum of asthma patients
-
COI: 1:STN:280:DC%2BD287jtFWnsQ%3D%3D
-
Truyen, E. et al. Evaluation of airway inflammation by quantitative Th1/Th2 cytokine mRNA measurement in sputum of asthma patients. Thorax 61, 202–208 (2006).
-
(2006)
Thorax
, vol.61
, pp. 202-208
-
-
Truyen, E.1
-
20
-
-
84900873950
-
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
-
COI: 1:CAS:528:DC%2BC2cXks12ku7c%3D
-
Trapnell, C. et al. The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells. Nat. Biotechnol. 32, 381–386 (2014).
-
(2014)
Nat. Biotechnol.
, vol.32
, pp. 381-386
-
-
Trapnell, C.1
-
21
-
-
84902352161
-
The cell biology of asthma
-
COI: 1:CAS:528:DC%2BC2cXhtVSktrbO
-
Erle, D. J. & Sheppard, D. The cell biology of asthma. J. Cell Biol. 205, 621–631 (2014).
-
(2014)
J. Cell Biol.
, vol.205
, pp. 621-631
-
-
Erle, D.J.1
Sheppard, D.2
-
22
-
-
84920874540
-
Notch2 is required for inflammatory cytokine-driven goblet cell metaplasia in the lung
-
COI: 1:CAS:528:DC%2BC2MXmvFansw%3D%3D
-
Danahay, H. et al. Notch2 is required for inflammatory cytokine-driven goblet cell metaplasia in the lung. Cell Rep. 10, 239–252 (2015).
-
(2015)
Cell Rep.
, vol.10
, pp. 239-252
-
-
Danahay, H.1
-
23
-
-
84923675686
-
Activation of NOTCH1 or NOTCH3 signaling skews human airway basal cell differentiation toward a secretory pathway
-
Gomi, K., Arbelaez, V., Crystal, R. G. & Walters, M. S. Activation of NOTCH1 or NOTCH3 signaling skews human airway basal cell differentiation toward a secretory pathway. PLoS ONE 10, e0116507 (2015).
-
(2015)
PLoS ONE
, vol.10
-
-
Gomi, K.1
Arbelaez, V.2
Crystal, R.G.3
Walters, M.S.4
-
24
-
-
85052698825
-
Allergic inflammatory memory in human respiratory epithelial progenitor cells
-
COI: 1:CAS:528:DC%2BC1cXhsFOgsL3P
-
Ordovas-Montanes, J. et al. Allergic inflammatory memory in human respiratory epithelial progenitor cells. Nature 560, 649–654 (2018).
-
(2018)
Nature
, vol.560
, pp. 649-654
-
-
Ordovas-Montanes, J.1
-
25
-
-
84963838559
-
Airway epithelial expression quantitative trait loci reveal genes underlying asthma and other airway diseases
-
COI: 1:CAS:528:DC%2BC28XhtVKlurbO
-
Luo, W. et al. Airway epithelial expression quantitative trait loci reveal genes underlying asthma and other airway diseases. Am. J. Respir. Cell Mol. Biol. 54, 177–187 (2016).
-
(2016)
Am. J. Respir. Cell Mol. Biol.
, vol.54
, pp. 177-187
-
-
Luo, W.1
-
26
-
-
77954144226
-
Bronchial epithelial cells produce IL-5: implications for local immune responses in the airways
-
COI: 1:CAS:528:DC%2BC3cXosVGgsL8%3D
-
Wu, C. A. et al. Bronchial epithelial cells produce IL-5: implications for local immune responses in the airways. Cell. Immunol. 264, 32–41 (2010).
-
(2010)
Cell. Immunol.
, vol.264
, pp. 32-41
-
-
Wu, C.A.1
-
27
-
-
0027535474
-
Airway mucosal inflammation even in patients with newly diagnosed asthma
-
COI: 1:STN:280:DyaK3s7ot1yksw%3D%3D
-
Laitinen, L. A., Laitinen, A. & Haahtela, T. Airway mucosal inflammation even in patients with newly diagnosed asthma. Am. Rev. Respir. Dis. 147, 697–704 (1993).
-
(1993)
Am. Rev. Respir. Dis.
, vol.147
, pp. 697-704
-
-
Laitinen, L.A.1
Laitinen, A.2
Haahtela, T.3
-
28
-
-
79953288489
-
H2 inflammation in the pathogenesis of bronchial asthma
-
COI: 1:CAS:528:DC%2BC3MXnt1aktr0%3D
-
H2 inflammation in the pathogenesis of bronchial asthma. Korean J. Intern. Med. 26, 8–18 (2011).
-
(2011)
Korean J. Intern. Med.
, vol.26
, pp. 8-18
-
-
Arima, M.1
Fukuda, T.2
-
29
-
-
84897402119
-
H2 cells
-
COI: 1:CAS:528:DC%2BC2cXivVKnsA%3D%3D
-
H2 cells. J. Allergy Clin. Immunol. 133, 1184–1194 (2014).
-
(2014)
J. Allergy Clin. Immunol.
, vol.133
, pp. 1184-1194
-
-
Xue, L.1
-
30
-
-
77951672627
-
H2-high asthma
-
COI: 1:CAS:528:DC%2BC3cXlvVWmtbw%3D
-
H2-high asthma. J. Allergy Clin. Immunol. 125, 1046–1053.e8 (2010).
-
(2010)
J. Allergy Clin. Immunol.
, vol.125
, pp. 1046-1053.e8
-
-
Dougherty, R.H.1
-
31
-
-
0025996497
-
IgM in the airways of asthma patients
-
COI: 1:STN:280:DyaK38%2FptFSrsA%3D%3D
-
Hol, B. E., van de Graaf, E. A., Out, T. A., Hische, E. A. & Jansen, H. M. IgM in the airways of asthma patients. Int. Arch. Allergy Appl. Immunol. 96, 12–18 (1991).
-
(1991)
Int. Arch. Allergy Appl. Immunol.
, vol.96
, pp. 12-18
-
-
Hol, B.E.1
van de Graaf, E.A.2
Out, T.A.3
Hische, E.A.4
Jansen, H.M.5
-
33
-
-
85048028902
-
+ T cells inhabit the human lungs
-
COI: 1:CAS:528:DC%2BC2sXhvVSmsLbK
-
+ T cells inhabit the human lungs. Mucosal Immunol. 11, 654–667 (2018).
-
(2018)
Mucosal Immunol.
, vol.11
, pp. 654-667
-
-
Oja, A.E.1
-
34
-
-
84945548667
-
H2 cell subpopulation with enhanced function
-
COI: 1:CAS:528:DC%2BC2MXhsF2hu7nK
-
H2 cell subpopulation with enhanced function. J. Allergy Clin. Immunol. 137, 907–918.e9 (2016).
-
(2016)
J. Allergy Clin. Immunol.
, vol.137
, pp. 907-918.e9
-
-
Mitson-Salazar, A.1
-
35
-
-
85026646095
-
H2 cell subpopulation is associated with allergic disorders
-
H2 cell subpopulation is associated with allergic disorders. Sci. Transl. Med. 9, eaam9171 (2017).
-
(2017)
Sci. Transl. Med.
, vol.9
, pp. eaam9171
-
-
Wambre, E.1
-
36
-
-
84960886647
-
H17 signature in nasal mucosa
-
COI: 1:CAS:528:DC%2BC28XnslKhu70%3D
-
H17 signature in nasal mucosa. J. Allergy Clin. Immunol. 137, 1514–1524 (2016).
-
(2016)
J. Allergy Clin. Immunol.
, vol.137
, pp. 1514-1524
-
-
Lam, E.P.S.1
-
37
-
-
85056665737
-
Single-cell reconstruction of the early maternal–fetal interface in humans
-
COI: 1:CAS:528:DC%2BC1cXit1SnsbzI
-
Vento-Tormo, R. et al. Single-cell reconstruction of the early maternal–fetal interface in humans. Nature 563, 347–353 (2018).
-
(2018)
Nature
, vol.563
, pp. 347-353
-
-
Vento-Tormo, R.1
-
38
-
-
78851472074
-
Haplotypes covering the TNFSF10 gene are associated with bronchial asthma
-
Weckmann, M., Kopp, M. V., Heinzmann, A. & Mattes, J. Haplotypes covering the TNFSF10 gene are associated with bronchial asthma. Pediatr. Allergy Immunol. 22, 25–30 (2011).
-
(2011)
Pediatr. Allergy Immunol.
, vol.22
, pp. 25-30
-
-
Weckmann, M.1
Kopp, M.V.2
Heinzmann, A.3
Mattes, J.4
-
39
-
-
80051570509
-
Thymic stromal lymphopoietin gene promoter polymorphisms are associated with susceptibility to bronchial asthma
-
COI: 1:CAS:528:DC%2BC3MXot1Kjtrc%3D
-
Harada, M. et al. Thymic stromal lymphopoietin gene promoter polymorphisms are associated with susceptibility to bronchial asthma. Am. J. Respir. Cell Mol. Biol. 44, 787–793 (2011).
-
(2011)
Am. J. Respir. Cell Mol. Biol.
, vol.44
, pp. 787-793
-
-
Harada, M.1
-
40
-
-
84875231964
-
Decoding asthma: translating genetic variation in IL33 and IL1RL1 into disease pathophysiology
-
COI: 1:CAS:528:DC%2BC3sXitFKnsbc%3D
-
Grotenboer, N. S., Ketelaar, M. E., Koppelman, G. H. & Nawijn, M. C. Decoding asthma: translating genetic variation in IL33 and IL1RL1 into disease pathophysiology. J. Allergy Clin. Immunol. 131, 856–865 (2013).
-
(2013)
J. Allergy Clin. Immunol.
, vol.131
, pp. 856-865
-
-
Grotenboer, N.S.1
Ketelaar, M.E.2
Koppelman, G.H.3
Nawijn, M.C.4
-
41
-
-
14944365805
-
Epithelial-mesenchymal communication in the pathogenesis of chronic asthma
-
COI: 1:CAS:528:DC%2BD28XhsFGisL4%3D
-
Holgate, S. T. et al. Epithelial-mesenchymal communication in the pathogenesis of chronic asthma. Proc. Am. Thorac. Soc. 1, 93–98 (2004).
-
(2004)
Proc. Am. Thorac. Soc.
, vol.1
, pp. 93-98
-
-
Holgate, S.T.1
-
42
-
-
34250159407
-
Down-regulation of E-cadherin in human bronchial epithelial cells leads to epidermal growth factor receptor-dependent Th2 cell-promoting activity
-
COI: 1:CAS:528:DC%2BD2sXmtVKgurY%3D
-
Heijink, I. H. et al. Down-regulation of E-cadherin in human bronchial epithelial cells leads to epidermal growth factor receptor-dependent Th2 cell-promoting activity. J. Immunol. 178, 7678–7685 (2007).
-
(2007)
J. Immunol.
, vol.178
, pp. 7678-7685
-
-
Heijink, I.H.1
-
43
-
-
85018547050
-
Aberrant DNA methylation and expression of SPDEF and FOXA2 in airway epithelium of patients with COPD
-
COI: 1:STN:280:DC%2BC1crhvFKiuw%3D%3D
-
Song, J. et al. Aberrant DNA methylation and expression of SPDEF and FOXA2 in airway epithelium of patients with COPD. Clin. Epigenetics 9, 42 (2017).
-
(2017)
Clin. Epigenetics
, vol.9
-
-
Song, J.1
-
44
-
-
84891677425
-
Full-length RNA-seq from single cells using Smart-seq2
-
COI: 1:CAS:528:DC%2BC2cXls1ejtrc%3D
-
Picelli, S. et al. Full-length RNA-seq from single cells using Smart-seq2. Nat. Protoc. 9, 171–181 (2014).
-
(2014)
Nat. Protoc.
, vol.9
, pp. 171-181
-
-
Picelli, S.1
-
45
-
-
77951820899
-
Fast and SNP-tolerant detection of complex variants and splicing in short reads
-
COI: 1:CAS:528:DC%2BC3cXjvFyktLs%3D
-
Wu, T. D. & Nacu, S. Fast and SNP-tolerant detection of complex variants and splicing in short reads. Bioinformatics 26, 873–881 (2010).
-
(2010)
Bioinformatics
, vol.26
, pp. 873-881
-
-
Wu, T.D.1
Nacu, S.2
-
46
-
-
84871809302
-
STAR: ultrafast universal RNA-seq aligner
-
COI: 1:CAS:528:DC%2BC38XhvV2gsbnF
-
Dobin, A. et al. STAR: ultrafast universal RNA-seq aligner. Bioinformatics 29, 15–21 (2013).
-
(2013)
Bioinformatics
, vol.29
, pp. 15-21
-
-
Dobin, A.1
-
47
-
-
85032485531
-
Single-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations
-
van den Brink, S. C. et al. Single-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations. Nat. Methods 14, 935–936 (2017).
-
(2017)
Nat. Methods
, vol.14
, pp. 935-936
-
-
van den Brink, S.C.1
-
49
-
-
85064408983
-
Scrublet: computational identification of cell doublets in single-cell transcriptomic data
-
Wolock, S. L., Lopez, R. & Klein, A. M. Scrublet: computational identification of cell doublets in single-cell transcriptomic data. Cell Syst. 8, P281–291.E9 (2019).
-
(2019)
Cell Syst.
, vol.8
, pp. P281-291.E9
-
-
Wolock, S.L.1
Lopez, R.2
Klein, A.M.3
-
50
-
-
85046298440
-
Integrating single-cell transcriptomic data across different conditions, technologies, and species
-
COI: 1:CAS:528:DC%2BC1cXmslKrtL0%3D
-
Butler, A., Hoffman, P., Smibert, P., Papalexi, E. & Satija, R. Integrating single-cell transcriptomic data across different conditions, technologies, and species. Nat. Biotechnol. 36, 411–420 (2018).
-
(2018)
Nat. Biotechnol.
, vol.36
, pp. 411-420
-
-
Butler, A.1
Hoffman, P.2
Smibert, P.3
Papalexi, E.4
Satija, R.5
|