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Volumn 26, Issue 8, 2018, Pages 677-691

Evolutionary Mechanisms Shaping the Maintenance of Antibiotic Resistance

Author keywords

antibiotic; compensation; epistasis; evolution; fitness costs; multidrug resistance

Indexed keywords

AMINOGLYCOSIDE ANTIBIOTIC AGENT; CARBAPENEM; CEPHALOSPORIN; DNA TOPOISOMERASE (ATP HYDROLYSING) A; FOSFOMYCIN; OFLOXACIN; QUINOLINE DERIVED ANTIINFECTIVE AGENT; RIFAMPICIN; RNA POLYMERASE BETA SUBUNIT; STREPTOMYCIN; TETRACYCLINE; VANCOMYCIN; ANTIINFECTIVE AGENT;

EID: 85044768181     PISSN: 0966842X     EISSN: 18784380     Source Type: Journal    
DOI: 10.1016/j.tim.2018.01.005     Document Type: Review
Times cited : (180)

References (146)
  • 1
    • 77949569493 scopus 로고    scopus 로고
    • Antibiotic resistance and its cost: is it possible to reverse resistance?
    • Andersson, D.I., Hughes, D., Antibiotic resistance and its cost: is it possible to reverse resistance?. Nat. Rev. Microbiol. 8 (2010), 260–271.
    • (2010) Nat. Rev. Microbiol. , vol.8 , pp. 260-271
    • Andersson, D.I.1    Hughes, D.2
  • 2
    • 84861998997 scopus 로고    scopus 로고
    • Acquired antibiotic resistance genes: an overview
    • van Hoek, A.H.A.M., et al. Acquired antibiotic resistance genes: an overview. Front. Microbiol., 2, 2011, 203.
    • (2011) Front. Microbiol. , vol.2 , pp. 203
    • van Hoek, A.H.A.M.1
  • 3
    • 79960941561 scopus 로고    scopus 로고
    • Selection of resistant bacteria at very low antibiotic concentrations
    • Gullberg, E., et al. Selection of resistant bacteria at very low antibiotic concentrations. PLoS Pathog., 7, 2011, e1002158.
    • (2011) PLoS Pathog. , vol.7
    • Gullberg, E.1
  • 4
    • 84955621185 scopus 로고    scopus 로고
    • Limits to compensatory adaptation and the persistence of antibiotic resistance in pathogenic bacteria
    • MacLean, R.C., Vogwill, T., Limits to compensatory adaptation and the persistence of antibiotic resistance in pathogenic bacteria. Evol. Med. Public Health 2015 (2015), 4–12.
    • (2015) Evol. Med. Public Health , vol.2015 , pp. 4-12
    • MacLean, R.C.1    Vogwill, T.2
  • 5
    • 84859574738 scopus 로고    scopus 로고
    • Antibiotic resistance is prevalent in an isolated cave microbiome
    • Bhullar, K., et al. Antibiotic resistance is prevalent in an isolated cave microbiome. PLoS One, 7, 2012, e34953.
    • (2012) PLoS One , vol.7
    • Bhullar, K.1
  • 6
    • 84865531061 scopus 로고    scopus 로고
    • The shared antibiotic resistome of soil bacteria and human pathogens
    • Forsberg, K.J., et al. The shared antibiotic resistome of soil bacteria and human pathogens. Science 337 (2012), 1107–1111.
    • (2012) Science , vol.337 , pp. 1107-1111
    • Forsberg, K.J.1
  • 7
    • 78650489953 scopus 로고    scopus 로고
    • Elements of Evolutionary Genetics
    • Roberts & Co
    • Charlesworth, B., Elements of Evolutionary Genetics. 2010, Roberts & Co.
    • (2010)
    • Charlesworth, B.1
  • 8
    • 84875164559 scopus 로고    scopus 로고
    • The true cost of antimicrobial resistance
    • Smith, R., Coast, J., The true cost of antimicrobial resistance. BMJ, 346, 2013, f1493.
    • (2013) BMJ , vol.346
    • Smith, R.1    Coast, J.2
  • 9
    • 85029325925 scopus 로고    scopus 로고
    • Evolutionary trajectories to antibiotic resistance
    • Hughes, D., Andersson, D.I., Evolutionary trajectories to antibiotic resistance. Annu. Rev. Microbiol. 71 (2017), 579–596.
    • (2017) Annu. Rev. Microbiol. , vol.71 , pp. 579-596
    • Hughes, D.1    Andersson, D.I.2
  • 10
    • 85014472101 scopus 로고    scopus 로고
    • Epistasis and the evolution of antimicrobial resistance
    • Wong, A., Epistasis and the evolution of antimicrobial resistance. Front. Microbiol., 8, 2017, 246.
    • (2017) Front. Microbiol. , vol.8 , pp. 246
    • Wong, A.1
  • 11
    • 34547924819 scopus 로고    scopus 로고
    • Adaptive mutations in bacteria: high rate and small effects
    • Perfeito, L., et al. Adaptive mutations in bacteria: high rate and small effects. Science 317 (2007), 813–815.
    • (2007) Science , vol.317 , pp. 813-815
    • Perfeito, L.1
  • 12
    • 0033936567 scopus 로고    scopus 로고
    • Mutation frequencies and antibiotic resistance
    • Martinez, J.L., Baquero, F., Mutation frequencies and antibiotic resistance. Antimicrob. Agents Chemother. 44 (2000), 1771–1777.
    • (2000) Antimicrob. Agents Chemother. , vol.44 , pp. 1771-1777
    • Martinez, J.L.1    Baquero, F.2
  • 13
    • 85020043148 scopus 로고    scopus 로고
    • Evolution of commensal bacteria in the intestinal tract of mice
    • Sousa, A., et al. Evolution of commensal bacteria in the intestinal tract of mice. Curr. Opin. Microbiol. 38 (2017), 114–121.
    • (2017) Curr. Opin. Microbiol. , vol.38 , pp. 114-121
    • Sousa, A.1
  • 14
    • 0032491390 scopus 로고    scopus 로고
    • Evidence that gene amplification underlies adaptive mutability of the bacterial lac operon
    • Andersson, D.I., et al. Evidence that gene amplification underlies adaptive mutability of the bacterial lac operon. Science 282 (1998), 1133–1135.
    • (1998) Science , vol.282 , pp. 1133-1135
    • Andersson, D.I.1
  • 15
    • 78651066562 scopus 로고    scopus 로고
    • The joys and terrors of fast adaptation: new findings elucidate antibiotic resistance and natural selection
    • Roth, J.R., The joys and terrors of fast adaptation: new findings elucidate antibiotic resistance and natural selection. Mol. Microbiol. 79 (2011), 279–282.
    • (2011) Mol. Microbiol. , vol.79 , pp. 279-282
    • Roth, J.R.1
  • 16
    • 21344460325 scopus 로고    scopus 로고
    • Inhibition of mutation and combating the evolution of antibiotic resistance
    • Cirz, R.T., et al. Inhibition of mutation and combating the evolution of antibiotic resistance. PLoS Biol., 3, 2005, e176.
    • (2005) PLoS Biol. , vol.3 , pp. e176
    • Cirz, R.T.1
  • 17
    • 85006263447 scopus 로고    scopus 로고
    • Fisher's geometrical model and the mutational patterns of antibiotic resistance across dose gradients
    • Harmand, N., et al. Fisher's geometrical model and the mutational patterns of antibiotic resistance across dose gradients. Evol. Int. J. Org. Evol. 71 (2017), 23–37.
    • (2017) Evol. Int. J. Org. Evol. , vol.71 , pp. 23-37
    • Harmand, N.1
  • 18
    • 84874100936 scopus 로고    scopus 로고
    • Evolution of Escherichia coli rifampicin resistance in an antibiotic-free environment during thermal stress
    • Rodríguez-Verdugo, A., et al. Evolution of Escherichia coli rifampicin resistance in an antibiotic-free environment during thermal stress. BMC Evol. Biol., 13, 2013, 50.
    • (2013) BMC Evol. Biol. , vol.13 , pp. 50
    • Rodríguez-Verdugo, A.1
  • 19
    • 84902536156 scopus 로고    scopus 로고
    • Microbiological effects of sublethal levels of antibiotics
    • Andersson, D.I., Hughes, D., Microbiological effects of sublethal levels of antibiotics. Nat. Rev. Microbiol. 12 (2014), 465–478.
    • (2014) Nat. Rev. Microbiol. , vol.12 , pp. 465-478
    • Andersson, D.I.1    Hughes, D.2
  • 20
    • 0032985104 scopus 로고    scopus 로고
    • Direct selection for mutators in Escherichia coli
    • Miller, J.H., et al. Direct selection for mutators in Escherichia coli. J. Bacteriol. 181 (1999), 1576–1584.
    • (1999) J. Bacteriol. , vol.181 , pp. 1576-1584
    • Miller, J.H.1
  • 21
    • 0030924545 scopus 로고    scopus 로고
    • Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria
    • Vulić M., et al. Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria. Proc. Natl. Acad. Sci. U. S. A. 94 (1997), 9763–9767.
    • (1997) Proc. Natl. Acad. Sci. U. S. A. , vol.94 , pp. 9763-9767
    • Vulić, M.1
  • 22
    • 31544468664 scopus 로고    scopus 로고
    • Intermediate mutation frequencies favor evolution of multidrug resistance in Escherichia coli
    • Denamur, E., et al. Intermediate mutation frequencies favor evolution of multidrug resistance in Escherichia coli. Genetics 171 (2005), 825–827.
    • (2005) Genetics , vol.171 , pp. 825-827
    • Denamur, E.1
  • 23
    • 84942191993 scopus 로고    scopus 로고
    • Improving predictions of the risk of resistance development against new and old antibiotics
    • Andersson, D.I., Improving predictions of the risk of resistance development against new and old antibiotics. Clin. Microbiol. Infect. 21 (2015), 894–898.
    • (2015) Clin. Microbiol. Infect. , vol.21 , pp. 894-898
    • Andersson, D.I.1
  • 24
    • 33845321413 scopus 로고    scopus 로고
    • The emergence of antibiotic resistance by mutation
    • Woodford, N., Ellington, M.J., The emergence of antibiotic resistance by mutation. Clin. Microbiol. Infect. 13 (2007), 5–18.
    • (2007) Clin. Microbiol. Infect. , vol.13 , pp. 5-18
    • Woodford, N.1    Ellington, M.J.2
  • 25
    • 84991712897 scopus 로고    scopus 로고
    • Genetic drift, selection and the evolution of the mutation rate
    • Lynch, M., et al. Genetic drift, selection and the evolution of the mutation rate. Nat. Rev. Genet., 17, 2016, 704.
    • (2016) Nat. Rev. Genet. , vol.17 , pp. 704
    • Lynch, M.1
  • 26
    • 85018372872 scopus 로고    scopus 로고
    • Evidence for the evolutionary steps leading to mecA-mediated β-lactam resistance in staphylococci
    • Rolo, J., et al. Evidence for the evolutionary steps leading to mecA-mediated β-lactam resistance in staphylococci. PLoS Genet., 13, 2017, e1006674.
    • (2017) PLoS Genet. , vol.13
    • Rolo, J.1
  • 27
    • 85026806599 scopus 로고    scopus 로고
    • Selection and transmission of antibiotic-resistant bacteria
    • MTBP-0013-2016
    • Andersson, D.I., Hughes, D., Selection and transmission of antibiotic-resistant bacteria. Microbiol. Spectr., 5, 2017 MTBP-0013-2016.
    • (2017) Microbiol. Spectr. , vol.5
    • Andersson, D.I.1    Hughes, D.2
  • 28
    • 85015431413 scopus 로고    scopus 로고
    • Fitness costs associated with the acquisition of antibiotic resistance
    • Hernando-Amado, S., et al. Fitness costs associated with the acquisition of antibiotic resistance. Essays Biochem. 61 (2017), 37–48.
    • (2017) Essays Biochem. , vol.61 , pp. 37-48
    • Hernando-Amado, S.1
  • 29
    • 0036961416 scopus 로고    scopus 로고
    • Plasmids spread very fast in heterogeneous bacterial communities
    • Dionisio, F., et al. Plasmids spread very fast in heterogeneous bacterial communities. Genetics 162 (2002), 1525–1532.
    • (2002) Genetics , vol.162 , pp. 1525-1532
    • Dionisio, F.1
  • 30
    • 0022358659 scopus 로고
    • Expression of tetracycline resistance in pBR322 derivatives reduces the reproductive fitness of plasmid-containing Escherichia coli
    • Lee, S.W., Edlin, G., Expression of tetracycline resistance in pBR322 derivatives reduces the reproductive fitness of plasmid-containing Escherichia coli. Gene 39 (1985), 173–180.
    • (1985) Gene , vol.39 , pp. 173-180
    • Lee, S.W.1    Edlin, G.2
  • 31
    • 0027182325 scopus 로고
    • Adaptation of Escherichia coli growth rates to the presence of pBR322
    • McDermott, P.J., et al. Adaptation of Escherichia coli growth rates to the presence of pBR322. Lett. Appl. Microbiol. 17 (1993), 139–143.
    • (1993) Lett. Appl. Microbiol. , vol.17 , pp. 139-143
    • McDermott, P.J.1
  • 32
    • 0347992016 scopus 로고    scopus 로고
    • Amelioration of the cost of conjugative plasmid carriage in Eschericha coli K12
    • Dahlberg, C., Chao, L., Amelioration of the cost of conjugative plasmid carriage in Eschericha coli K12. Genetics 165 (2003), 1641–1649.
    • (2003) Genetics , vol.165 , pp. 1641-1649
    • Dahlberg, C.1    Chao, L.2
  • 33
    • 3042692238 scopus 로고    scopus 로고
    • Enhancement of host fitness by the sul2-coding plasmid p9123 in the absence of selective pressure
    • Enne, V.I., et al. Enhancement of host fitness by the sul2-coding plasmid p9123 in the absence of selective pressure. J. Antimicrob. Chemother. 53 (2004), 958–963.
    • (2004) J. Antimicrob. Chemother. , vol.53 , pp. 958-963
    • Enne, V.I.1
  • 34
    • 33847234930 scopus 로고    scopus 로고
    • Frequent conjugative transfer accelerates adaptation of a broad-host-range plasmid to an unfavorable Pseudomonas putida host
    • Heuer, H., et al. Frequent conjugative transfer accelerates adaptation of a broad-host-range plasmid to an unfavorable Pseudomonas putida host. FEMS Microbiol. Ecol. 59 (2007), 738–748.
    • (2007) FEMS Microbiol. Ecol. , vol.59 , pp. 738-748
    • Heuer, H.1
  • 35
    • 34548407803 scopus 로고    scopus 로고
    • A fitness cost associated with the antibiotic resistance enzyme SME-1 beta-lactamase
    • Marciano, D.C., et al. A fitness cost associated with the antibiotic resistance enzyme SME-1 beta-lactamase. Genetics 176 (2007), 2381–2392.
    • (2007) Genetics , vol.176 , pp. 2381-2392
    • Marciano, D.C.1
  • 36
    • 84887536164 scopus 로고    scopus 로고
    • Fitness costs of various mobile genetic elements in Enterococcus faecium and Enterococcus faecalis
    • Starikova, I., et al. Fitness costs of various mobile genetic elements in Enterococcus faecium and Enterococcus faecalis. J. Antimicrob. Chemother. 68 (2013), 2755–2765.
    • (2013) J. Antimicrob. Chemother. , vol.68 , pp. 2755-2765
    • Starikova, I.1
  • 37
    • 84925306196 scopus 로고    scopus 로고
    • Costs of antibiotic resistance – separating trait effects and selective effects
    • Hall, A.R., et al. Costs of antibiotic resistance – separating trait effects and selective effects. Evol. Appl. 8 (2015), 261–272.
    • (2015) Evol. Appl. , vol.8 , pp. 261-272
    • Hall, A.R.1
  • 38
    • 0037990199 scopus 로고    scopus 로고
    • The effect of changes in the consumption of macrolide antibiotics on erythromycin resistance in group A streptococci in Finland
    • Seppälä H., et al. The effect of changes in the consumption of macrolide antibiotics on erythromycin resistance in group A streptococci in Finland. N. Engl. J. Med. 337 (1997), 441–446.
    • (1997) N. Engl. J. Med. , vol.337 , pp. 441-446
    • Seppälä, H.1
  • 39
    • 0035962337 scopus 로고    scopus 로고
    • Persistence of sulphonamide resistance in Escherichia coli in the UK despite national prescribing restriction
    • Enne, V.I., et al. Persistence of sulphonamide resistance in Escherichia coli in the UK despite national prescribing restriction. Lancet 357 (2001), 1325–1328.
    • (2001) Lancet , vol.357 , pp. 1325-1328
    • Enne, V.I.1
  • 40
    • 27744544283 scopus 로고    scopus 로고
    • Resistance among Escherichia coli to sulphonamides and other antimicrobials now little used in man
    • Bean, D.C., et al. Resistance among Escherichia coli to sulphonamides and other antimicrobials now little used in man. J. Antimicrob. Chemother. 56 (2005), 962–964.
    • (2005) J. Antimicrob. Chemother. , vol.56 , pp. 962-964
    • Bean, D.C.1
  • 41
    • 70049084153 scopus 로고    scopus 로고
    • Impact of quinolone restriction on resistance patterns of Escherichia coli isolated from urine by culture in a community setting
    • Gottesman, B.S., et al. Impact of quinolone restriction on resistance patterns of Escherichia coli isolated from urine by culture in a community setting. Clin. Infect. Dis. 49 (2009), 869–875.
    • (2009) Clin. Infect. Dis. , vol.49 , pp. 869-875
    • Gottesman, B.S.1
  • 42
    • 84872035293 scopus 로고    scopus 로고
    • Increased survival of antibiotic-resistant Escherichia coli inside macrophages
    • Miskinyte, M., Gordo, I., Increased survival of antibiotic-resistant Escherichia coli inside macrophages. Antimicrob. Agents Chemother. 57 (2013), 189–195.
    • (2013) Antimicrob. Agents Chemother. , vol.57 , pp. 189-195
    • Miskinyte, M.1    Gordo, I.2
  • 43
    • 84976877620 scopus 로고    scopus 로고
    • Enhanced survival of rifampin- and streptomycin-resistant Escherichia coli inside macrophages
    • Durão, P., et al. Enhanced survival of rifampin- and streptomycin-resistant Escherichia coli inside macrophages. Antimicrob. Agents Chemother. 60 (2016), 4324–4332.
    • (2016) Antimicrob. Agents Chemother. , vol.60 , pp. 4324-4332
    • Durão, P.1
  • 44
    • 85020775051 scopus 로고    scopus 로고
    • Antibiotic-Independent adaptive effects of antibiotic resistance mutations
    • Hershberg, R., Antibiotic-Independent adaptive effects of antibiotic resistance mutations. Trends Genet. 33 (2017), 521–528.
    • (2017) Trends Genet. , vol.33 , pp. 521-528
    • Hershberg, R.1
  • 45
    • 84890817835 scopus 로고    scopus 로고
    • Enhanced in vivo fitness of carbapenem-resistant oprD mutants of Pseudomonas aeruginosa revealed through high-throughput sequencing
    • Skurnik, D., et al. Enhanced in vivo fitness of carbapenem-resistant oprD mutants of Pseudomonas aeruginosa revealed through high-throughput sequencing. Proc. Natl. Acad. Sci. U. S. A. 110 (2013), 20747–20752.
    • (2013) Proc. Natl. Acad. Sci. U. S. A. , vol.110 , pp. 20747-20752
    • Skurnik, D.1
  • 46
    • 84937950366 scopus 로고    scopus 로고
    • Fitness cost of antibiotic susceptibility during bacterial infection
    • Roux, D., et al. Fitness cost of antibiotic susceptibility during bacterial infection. Sci. Transl. Med., 7, 2015, 297ra114.
    • (2015) Sci. Transl. Med. , vol.7
    • Roux, D.1
  • 47
    • 84907346425 scopus 로고    scopus 로고
    • Evolution of resistance to a last-resort antibiotic in Staphylococcus aureus via bacterial competition
    • Koch, G., et al. Evolution of resistance to a last-resort antibiotic in Staphylococcus aureus via bacterial competition. Cell 158 (2014), 1060–1071.
    • (2014) Cell , vol.158 , pp. 1060-1071
    • Koch, G.1
  • 48
    • 84943412847 scopus 로고    scopus 로고
    • Multiple resistance at no cost: rifampicin and streptomycin a dangerous liaison in the spread of antibiotic resistance
    • Durão, P., et al. Multiple resistance at no cost: rifampicin and streptomycin a dangerous liaison in the spread of antibiotic resistance. Mol. Biol. Evol. 32 (2015), 2675–2680.
    • (2015) Mol. Biol. Evol. , vol.32 , pp. 2675-2680
    • Durão, P.1
  • 49
    • 84870520677 scopus 로고    scopus 로고
    • Antibiotic resistance and stress in the light of Fisher's model
    • Trindade, S., et al. Antibiotic resistance and stress in the light of Fisher's model. Evol. Int. J. Org. Evol. 66 (2012), 3815–3824.
    • (2012) Evol. Int. J. Org. Evol. , vol.66 , pp. 3815-3824
    • Trindade, S.1
  • 50
    • 84928190938 scopus 로고    scopus 로고
    • Comprehensive phenotypic characterization of rifampicin resistance mutations in Salmonella provides insight into the evolution of resistance in Mycobacterium tuberculosis
    • Brandis, G., et al. Comprehensive phenotypic characterization of rifampicin resistance mutations in Salmonella provides insight into the evolution of resistance in Mycobacterium tuberculosis. J. Antimicrob. Chemother. 70 (2015), 680–685.
    • (2015) J. Antimicrob. Chemother. , vol.70 , pp. 680-685
    • Brandis, G.1
  • 51
    • 29944432454 scopus 로고    scopus 로고
    • Molecular genetic and structural modeling studies of Staphylococcus aureus RNA polymerase and the fitness of rifampin resistance genotypes in relation to clinical prevalence
    • O'Neill, A.J., et al. Molecular genetic and structural modeling studies of Staphylococcus aureus RNA polymerase and the fitness of rifampin resistance genotypes in relation to clinical prevalence. Antimicrob. Agents Chemother. 50 (2006), 298–309.
    • (2006) Antimicrob. Agents Chemother. , vol.50 , pp. 298-309
    • O'Neill, A.J.1
  • 52
    • 84925296085 scopus 로고    scopus 로고
    • The genetic basis of the fitness costs of antimicrobial resistance: a meta-analysis approach
    • Vogwill, T., MacLean, R.C., The genetic basis of the fitness costs of antimicrobial resistance: a meta-analysis approach. Evol. Appl. 8 (2015), 284–295.
    • (2015) Evol. Appl. , vol.8 , pp. 284-295
    • Vogwill, T.1    MacLean, R.C.2
  • 53
    • 84987597485 scopus 로고    scopus 로고
    • Spatiotemporal microbial evolution on antibiotic landscapes
    • Baym, M., et al. Spatiotemporal microbial evolution on antibiotic landscapes. Science 353 (2016), 1147–1151.
    • (2016) Science , vol.353 , pp. 1147-1151
    • Baym, M.1
  • 54
    • 84949478882 scopus 로고    scopus 로고
    • Quantifying the determinants of evolutionary dynamics leading to drug resistance
    • Chevereau, G., et al. Quantifying the determinants of evolutionary dynamics leading to drug resistance. PLoS Biol., 13, 2015, e1002299.
    • (2015) PLoS Biol. , vol.13
    • Chevereau, G.1
  • 55
    • 79952355755 scopus 로고    scopus 로고
    • Selective advantage of resistant strains at trace levels of antibiotics: a simple and ultrasensitive color test for detection of antibiotics and genotoxic agents
    • Liu, A., et al. Selective advantage of resistant strains at trace levels of antibiotics: a simple and ultrasensitive color test for detection of antibiotics and genotoxic agents. Antimicrob. Agents Chemother. 55 (2011), 1204–1210.
    • (2011) Antimicrob. Agents Chemother. , vol.55 , pp. 1204-1210
    • Liu, A.1
  • 56
    • 85030449780 scopus 로고    scopus 로고
    • Interaction networks, ecological stability, and collective antibiotic tolerance in polymicrobial infections
    • Vos de, M.G.J., et al. Interaction networks, ecological stability, and collective antibiotic tolerance in polymicrobial infections. Proc. Natl. Acad. Sci. U. S. A. 114 (2017), 10666–10671.
    • (2017) Proc. Natl. Acad. Sci. U. S. A. , vol.114 , pp. 10666-10671
    • Vos de, M.G.J.1
  • 57
    • 85036495200 scopus 로고    scopus 로고
    • Pseudomonas aeruginosa exoproducts determine antibiotic efficacy against Staphylococcus aureus
    • Radlinski, L., et al. Pseudomonas aeruginosa exoproducts determine antibiotic efficacy against Staphylococcus aureus. PLoS Biol., 15, 2017, e2003981.
    • (2017) PLoS Biol. , vol.15
    • Radlinski, L.1
  • 58
    • 75349102377 scopus 로고    scopus 로고
    • Chemical decay of an antibiotic inverts selection for resistance
    • Palmer, A.C., et al. Chemical decay of an antibiotic inverts selection for resistance. Nat. Chem. Biol. 6 (2010), 105–107.
    • (2010) Nat. Chem. Biol. , vol.6 , pp. 105-107
    • Palmer, A.C.1
  • 59
    • 85013753478 scopus 로고    scopus 로고
    • Ribosomal mutations promote the evolution of antibiotic resistance in a multidrug environment
    • Gomez, J.E., et al. Ribosomal mutations promote the evolution of antibiotic resistance in a multidrug environment. eLife, 6, 2017, e20420.
    • (2017) eLife , vol.6
    • Gomez, J.E.1
  • 60
    • 84923353801 scopus 로고    scopus 로고
    • Collective antibiotic tolerance: mechanisms, dynamics and intervention
    • Meredith, H.R., et al. Collective antibiotic tolerance: mechanisms, dynamics and intervention. Nat. Chem. Biol. 11 (2015), 182–188.
    • (2015) Nat. Chem. Biol. , vol.11 , pp. 182-188
    • Meredith, H.R.1
  • 61
    • 84885009252 scopus 로고    scopus 로고
    • Genome sequencing of 161 Mycobacterium tuberculosis isolates from China identifies genes and intergenic regions associated with drug resistance
    • Zhang, H., et al. Genome sequencing of 161 Mycobacterium tuberculosis isolates from China identifies genes and intergenic regions associated with drug resistance. Nat. Genet. 45 (2013), 1255–1260.
    • (2013) Nat. Genet. , vol.45 , pp. 1255-1260
    • Zhang, H.1
  • 62
    • 84555209977 scopus 로고    scopus 로고
    • Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes
    • Comas, I., et al. Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes. Nat. Genet. 44 (2011), 106–110.
    • (2011) Nat. Genet. , vol.44 , pp. 106-110
    • Comas, I.1
  • 63
    • 0036431723 scopus 로고    scopus 로고
    • Compensatory adaptation to the deleterious effect of antibiotic resistance in Salmonella typhimurium
    • Maisnier-Patin, S., et al. Compensatory adaptation to the deleterious effect of antibiotic resistance in Salmonella typhimurium. Mol. Microbiol. 46 (2002), 355–366.
    • (2002) Mol. Microbiol. , vol.46 , pp. 355-366
    • Maisnier-Patin, S.1
  • 64
    • 0034537725 scopus 로고    scopus 로고
    • Compensatory evolution in rifampin-resistant Escherichia coli
    • Reynolds, M.G., Compensatory evolution in rifampin-resistant Escherichia coli. Genetics 156 (2000), 1471–1481.
    • (2000) Genetics , vol.156 , pp. 1471-1481
    • Reynolds, M.G.1
  • 65
    • 84955558494 scopus 로고    scopus 로고
    • The genomic basis of adaptation to the fitness cost of rifampicin resistance in Pseudomonas aeruginosa
    • Qi, Q., et al. The genomic basis of adaptation to the fitness cost of rifampicin resistance in Pseudomonas aeruginosa. Proc. Biol. Sci., 283, 2016, 20152452.
    • (2016) Proc. Biol. Sci. , vol.283
    • Qi, Q.1
  • 66
    • 16244419018 scopus 로고    scopus 로고
    • Compensatory adaptation to the loss of biological fitness associated with acquisition of fusidic acid resistance in Staphylococcus aureus
    • Besier, S., et al. Compensatory adaptation to the loss of biological fitness associated with acquisition of fusidic acid resistance in Staphylococcus aureus. Antimicrob. Agents Chemother. 49 (2005), 1426–1431.
    • (2005) Antimicrob. Agents Chemother. , vol.49 , pp. 1426-1431
    • Besier, S.1
  • 67
    • 0042373060 scopus 로고    scopus 로고
    • Effects of environment on compensatory mutations to ameliorate costs of antibiotic resistance
    • Björkman, J., et al. Effects of environment on compensatory mutations to ameliorate costs of antibiotic resistance. Science 287 (2000), 1479–1482.
    • (2000) Science , vol.287 , pp. 1479-1482
    • Björkman, J.1
  • 68
    • 85030709439 scopus 로고    scopus 로고
    • Reversing resistance: different routes and common themes across pathogens
    • Allen, R.C., et al. Reversing resistance: different routes and common themes across pathogens. Proc. Biol. Sci., 284, 2017, 20171619.
    • (2017) Proc. Biol. Sci. , vol.284
    • Allen, R.C.1
  • 69
    • 2942665668 scopus 로고    scopus 로고
    • Adaptation to the deleterious effects of antimicrobial drug resistance mutations by compensatory evolution
    • Maisnier-Patin, S., Andersson, D.I., Adaptation to the deleterious effects of antimicrobial drug resistance mutations by compensatory evolution. Res. Microbiol. 155 (2004), 360–369.
    • (2004) Res. Microbiol. , vol.155 , pp. 360-369
    • Maisnier-Patin, S.1    Andersson, D.I.2
  • 70
    • 0034089028 scopus 로고    scopus 로고
    • Compensatory mutations, antibiotic resistance and the population genetics of adaptive evolution in bacteria
    • Levin, B.R., et al. Compensatory mutations, antibiotic resistance and the population genetics of adaptive evolution in bacteria. Genetics 154 (2000), 985–997.
    • (2000) Genetics , vol.154 , pp. 985-997
    • Levin, B.R.1
  • 71
    • 84942760743 scopus 로고    scopus 로고
    • Potential for adaptation overrides cost of resistance
    • Moura de Sousa, J., et al. Potential for adaptation overrides cost of resistance. Future Microbiol. 10 (2015), 1415–1431.
    • (2015) Future Microbiol. , vol.10 , pp. 1415-1431
    • Moura de Sousa, J.1
  • 72
    • 85019045579 scopus 로고    scopus 로고
    • Multidrug-resistant bacteria compensate for the epistasis between resistances
    • Moura de Sousa, J., et al. Multidrug-resistant bacteria compensate for the epistasis between resistances. PLoS Biol., 15, 2017, e2001741.
    • (2017) PLoS Biol. , vol.15
    • Moura de Sousa, J.1
  • 73
    • 84923532949 scopus 로고    scopus 로고
    • The rule of declining adaptability in microbial evolution experiments
    • Published online March 11, 2015
    • Couce, A., Tenaillon, O.A., The rule of declining adaptability in microbial evolution experiments. Front. Genet., 2015, 10.3389/fgene.2015.00099 Published online March 11, 2015.
    • (2015) Front. Genet.
    • Couce, A.1    Tenaillon, O.A.2
  • 74
    • 70049100936 scopus 로고    scopus 로고
    • Interplay in the selection of fluoroquinolone resistance and bacterial fitness
    • Marcusson, L.L., et al. Interplay in the selection of fluoroquinolone resistance and bacterial fitness. PLoS Pathog., 5, 2009, e1000541.
    • (2009) PLoS Pathog. , vol.5
    • Marcusson, L.L.1
  • 75
    • 33846632742 scopus 로고    scopus 로고
    • Fitness costs of fluoroquinolone resistance in Streptococcus pneumoniae
    • Rozen, D.E., et al. Fitness costs of fluoroquinolone resistance in Streptococcus pneumoniae. Antimicrob. Agents Chemother. 51 (2007), 412–416.
    • (2007) Antimicrob. Agents Chemother. , vol.51 , pp. 412-416
    • Rozen, D.E.1
  • 76
    • 34248336587 scopus 로고    scopus 로고
    • Multiple mechanisms to ameliorate the fitness burden of mupirocin resistance in Salmonella typhimurium
    • Paulander, W., et al. Multiple mechanisms to ameliorate the fitness burden of mupirocin resistance in Salmonella typhimurium. Mol. Microbiol. 64 (2007), 1038–1048.
    • (2007) Mol. Microbiol. , vol.64 , pp. 1038-1048
    • Paulander, W.1
  • 77
    • 85026518920 scopus 로고    scopus 로고
    • The antibiotic course has had its day
    • Llewelyn, M.J., et al. The antibiotic course has had its day. BMJ, 358, 2017, j3418.
    • (2017) BMJ , vol.358 , pp. j3418
    • Llewelyn, M.J.1
  • 78
    • 0033547039 scopus 로고    scopus 로고
    • Don't keep taking the tablets?
    • Lambert, H.P., Don't keep taking the tablets?. Lancet 354 (1999), 943–945.
    • (1999) Lancet , vol.354 , pp. 943-945
    • Lambert, H.P.1
  • 79
    • 33745615117 scopus 로고    scopus 로고
    • The competitive cost of antibiotic resistance in Mycobacterium tuberculosis
    • Gagneux, S., et al. The competitive cost of antibiotic resistance in Mycobacterium tuberculosis. Science 312 (2006), 1944–1946.
    • (2006) Science , vol.312 , pp. 1944-1946
    • Gagneux, S.1
  • 80
    • 84925260583 scopus 로고    scopus 로고
    • Origin and proliferation of multiple-drug resistance in bacterial pathogens
    • Chang, H.-H., et al. Origin and proliferation of multiple-drug resistance in bacterial pathogens. Microbiol. Mol. Biol. Rev. 79 (2015), 101–116.
    • (2015) Microbiol. Mol. Biol. Rev. , vol.79 , pp. 101-116
    • Chang, H.-H.1
  • 81
    • 84936857634 scopus 로고    scopus 로고
    • Genomic epidemiology of multidrug-resistant Mycobacterium tuberculosis during transcontinental spread
    • Coscolla, M., et al. Genomic epidemiology of multidrug-resistant Mycobacterium tuberculosis during transcontinental spread. J. Infect. Dis. 212 (2015), 302–310.
    • (2015) J. Infect. Dis. , vol.212 , pp. 302-310
    • Coscolla, M.1
  • 82
    • 0035807822 scopus 로고    scopus 로고
    • Mutation frequency and biological cost of antibiotic resistance in Helicobacter pylori
    • Björkholm, B., et al. Mutation frequency and biological cost of antibiotic resistance in Helicobacter pylori. Proc. Natl. Acad. Sci. U. S. A. 98 (2001), 14607–14612.
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 14607-14612
    • Björkholm, B.1
  • 83
    • 14144252921 scopus 로고    scopus 로고
    • Enhanced in vivo fitness of fluoroquinolone-resistant Campylobacter jejuni in the absence of antibiotic selection pressure
    • Luo, N., et al. Enhanced in vivo fitness of fluoroquinolone-resistant Campylobacter jejuni in the absence of antibiotic selection pressure. Proc. Natl. Acad. Sci. U. S. A. 102 (2005), 541–546.
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 541-546
    • Luo, N.1
  • 84
    • 79251553136 scopus 로고    scopus 로고
    • Diminishing returns from beneficial mutations and pervasive epistasis shape the fitness landscape for rifampicin resistance in Pseudomonas aeruginosa
    • MacLean, R.C., et al. Diminishing returns from beneficial mutations and pervasive epistasis shape the fitness landscape for rifampicin resistance in Pseudomonas aeruginosa. Genetics 186 (2010), 1345–1354.
    • (2010) Genetics , vol.186 , pp. 1345-1354
    • MacLean, R.C.1
  • 85
    • 84859171818 scopus 로고    scopus 로고
    • Fitness of Escherichia coli strains carrying expressed and partially silent IncN and IncP1 plasmids
    • Humphrey, B., et al. Fitness of Escherichia coli strains carrying expressed and partially silent IncN and IncP1 plasmids. BMC Microbiol., 12, 2012, 53.
    • (2012) BMC Microbiol. , vol.12 , pp. 53
    • Humphrey, B.1
  • 86
    • 85013087754 scopus 로고    scopus 로고
    • Low biological cost of carbapenemase-encoding plasmids following transfer from Klebsiella pneumoniae to Escherichia coli
    • Di Luca, M.C., et al. Low biological cost of carbapenemase-encoding plasmids following transfer from Klebsiella pneumoniae to Escherichia coli. J. Antimicrob. Chemother. 72 (2017), 85–89.
    • (2017) J. Antimicrob. Chemother. , vol.72 , pp. 85-89
    • Di Luca, M.C.1
  • 87
    • 68249108837 scopus 로고    scopus 로고
    • Positive epistasis drives the acquisition of multidrug resistance
    • Trindade, S., et al. Positive epistasis drives the acquisition of multidrug resistance. PLoS Genet., 5, 2009, e1000578.
    • (2009) PLoS Genet. , vol.5
    • Trindade, S.1
  • 88
    • 33645666942 scopus 로고    scopus 로고
    • Darwinian evolution can follow only very few mutational paths to fitter proteins
    • Weinreich, D.M., et al. Darwinian evolution can follow only very few mutational paths to fitter proteins. Science 312 (2006), 111–114.
    • (2006) Science , vol.312 , pp. 111-114
    • Weinreich, D.M.1
  • 89
    • 84894324351 scopus 로고    scopus 로고
    • Positive epistasis between co-infecting plasmids promotes plasmid survival in bacterial populations
    • San Millan, A., et al. Positive epistasis between co-infecting plasmids promotes plasmid survival in bacterial populations. ISME J. 8 (2014), 601–612.
    • (2014) ISME J. , vol.8 , pp. 601-612
    • San Millan, A.1
  • 90
    • 21044435697 scopus 로고    scopus 로고
    • Perspective: Sign epistasis and genetic constraint on evolutionary trajectories
    • Weinreich, D.M., et al. Perspective: Sign epistasis and genetic constraint on evolutionary trajectories. Evol. Int. J. Org. Evol. 59 (2005), 1165–1174.
    • (2005) Evol. Int. J. Org. Evol. , vol.59 , pp. 1165-1174
    • Weinreich, D.M.1
  • 91
    • 84887613917 scopus 로고    scopus 로고
    • Patterns of epistasis between beneficial mutations in an antibiotic resistance gene
    • Schenk, M.F., et al. Patterns of epistasis between beneficial mutations in an antibiotic resistance gene. Mol. Biol. Evol. 30 (2013), 1779–1787.
    • (2013) Mol. Biol. Evol. , vol.30 , pp. 1779-1787
    • Schenk, M.F.1
  • 92
    • 79953738501 scopus 로고    scopus 로고
    • Initial mutations direct alternative pathways of protein evolution
    • Salverda, M.L.M., et al. Initial mutations direct alternative pathways of protein evolution. PLoS Genet., 7, 2011, e1001321.
    • (2011) PLoS Genet. , vol.7
    • Salverda, M.L.M.1
  • 93
    • 79952793415 scopus 로고    scopus 로고
    • Second-order selection for evolvability in a large Escherichia coli population
    • Woods, R.J., et al. Second-order selection for evolvability in a large Escherichia coli population. Science 331 (2011), 1433–1436.
    • (2011) Science , vol.331 , pp. 1433-1436
    • Woods, R.J.1
  • 94
    • 84866944595 scopus 로고    scopus 로고
    • Genomic analysis of a key innovation in an experimental Escherichia coli population
    • Blount, Z.D., et al. Genomic analysis of a key innovation in an experimental Escherichia coli population. Nature 489 (2012), 513–518.
    • (2012) Nature , vol.489 , pp. 513-518
    • Blount, Z.D.1
  • 95
    • 84872198240 scopus 로고    scopus 로고
    • Predictability of evolution depends nonmonotonically on population size
    • Szendro, I.G., et al. Predictability of evolution depends nonmonotonically on population size. Proc. Natl. Acad. Sci. U. S. A. 110 (2013), 571–576.
    • (2013) Proc. Natl. Acad. Sci. U. S. A. , vol.110 , pp. 571-576
    • Szendro, I.G.1
  • 96
    • 84875264261 scopus 로고    scopus 로고
    • The heterogeneous evolution of multidrug-resistant Mycobacterium tuberculosis
    • Müller, B., et al. The heterogeneous evolution of multidrug-resistant Mycobacterium tuberculosis. Trends Genet. 29 (2013), 160–169.
    • (2013) Trends Genet. , vol.29 , pp. 160-169
    • Müller, B.1
  • 97
    • 65249103440 scopus 로고    scopus 로고
    • The cost of multiple drug resistance in Pseudomonas aeruginosa
    • Ward, H., et al. The cost of multiple drug resistance in Pseudomonas aeruginosa. J. Evol. Biol. 22 (2009), 997–1003.
    • (2009) J. Evol. Biol. , vol.22 , pp. 997-1003
    • Ward, H.1
  • 98
    • 84880898539 scopus 로고    scopus 로고
    • The cost of antibiotic resistance depends on evolutionary history in Escherichia coli
    • Angst, D.C., Hall, A.R., The cost of antibiotic resistance depends on evolutionary history in Escherichia coli. BMC Evol. Biol., 13, 2013, 163.
    • (2013) BMC Evol. Biol. , vol.13 , pp. 163
    • Angst, D.C.1    Hall, A.R.2
  • 99
    • 84892970335 scopus 로고    scopus 로고
    • Epistasis between antibiotic resistance mutations drives the evolution of extensively drug-resistant tuberculosis
    • Borrell, S., et al. Epistasis between antibiotic resistance mutations drives the evolution of extensively drug-resistant tuberculosis. Evol. Med. Public Health 2013 (2013), 65–74.
    • (2013) Evol. Med. Public Health , vol.2013 , pp. 65-74
    • Borrell, S.1
  • 100
    • 84875212396 scopus 로고    scopus 로고
    • Understanding, predicting and manipulating the genotypic evolution of antibiotic resistance
    • Palmer, A.C., Kishony, R., Understanding, predicting and manipulating the genotypic evolution of antibiotic resistance. Nat. Rev. Genet. 14 (2013), 243–248.
    • (2013) Nat. Rev. Genet. , vol.14 , pp. 243-248
    • Palmer, A.C.1    Kishony, R.2
  • 101
    • 14144251690 scopus 로고    scopus 로고
    • Thermodynamic prediction of protein neutrality
    • Bloom, J.D., et al. Thermodynamic prediction of protein neutrality. Proc. Natl. Acad. Sci. U. S. A. 102 (2005), 606–611.
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 606-611
    • Bloom, J.D.1
  • 102
    • 84881408157 scopus 로고    scopus 로고
    • Capturing the mutational landscape of the beta-lactamase TEM-1
    • Jacquier, H., et al. Capturing the mutational landscape of the beta-lactamase TEM-1. Proc. Natl. Acad. Sci. U. S. A. 110 (2013), 13067–13072.
    • (2013) Proc. Natl. Acad. Sci. U. S. A. , vol.110 , pp. 13067-13072
    • Jacquier, H.1
  • 103
    • 67849092403 scopus 로고    scopus 로고
    • The evolution of epistasis and its links with genetic robustness, complexity and drift in a phenotypic model of adaptation
    • Gros, P.-A., et al. The evolution of epistasis and its links with genetic robustness, complexity and drift in a phenotypic model of adaptation. Genetics 182 (2009), 277–293.
    • (2009) Genetics , vol.182 , pp. 277-293
    • Gros, P.-A.1
  • 104
    • 84914701200 scopus 로고    scopus 로고
    • Properties of selected mutations and genotypic landscapes under Fisher's geometric model
    • Blanquart, F., et al. Properties of selected mutations and genotypic landscapes under Fisher's geometric model. Evol. Int. J. Org. Evol. 68 (2014), 3537–3554.
    • (2014) Evol. Int. J. Org. Evol. , vol.68 , pp. 3537-3554
    • Blanquart, F.1
  • 105
    • 85020673975 scopus 로고    scopus 로고
    • Genotypic complexity of Fisher's geometric model
    • Hwang, S., et al. Genotypic complexity of Fisher's geometric model. Genetics 206 (2017), 1049–1079.
    • (2017) Genetics , vol.206 , pp. 1049-1079
    • Hwang, S.1
  • 106
    • 0036295508 scopus 로고    scopus 로고
    • Evolution of an antibiotic resistance enzyme constrained by stability and activity trade-offs
    • Wang, X., et al. Evolution of an antibiotic resistance enzyme constrained by stability and activity trade-offs. J. Mol. Biol. 320 (2002), 85–95.
    • (2002) J. Mol. Biol. , vol.320 , pp. 85-95
    • Wang, X.1
  • 107
    • 84862489556 scopus 로고    scopus 로고
    • Multidimensional epistasis and fitness landscapes in enzyme evolution
    • Zhang, W., et al. Multidimensional epistasis and fitness landscapes in enzyme evolution. Biochem. J. 445 (2012), 39–46.
    • (2012) Biochem. J. , vol.445 , pp. 39-46
    • Zhang, W.1
  • 108
    • 28444484984 scopus 로고    scopus 로고
    • Genomic buffering mitigates the effects of deleterious mutations in bacteria
    • Maisnier-Patin, S., et al. Genomic buffering mitigates the effects of deleterious mutations in bacteria. Nat. Genet. 37 (2005), 1376–1379.
    • (2005) Nat. Genet. , vol.37 , pp. 1376-1379
    • Maisnier-Patin, S.1
  • 109
    • 66649132872 scopus 로고    scopus 로고
    • Chaperonin overexpression promotes genetic variation and enzyme evolution
    • Tokuriki, N., Tawfik, D.S., Chaperonin overexpression promotes genetic variation and enzyme evolution. Nature 459 (2009), 668–673.
    • (2009) Nature , vol.459 , pp. 668-673
    • Tokuriki, N.1    Tawfik, D.S.2
  • 110
    • 22144476125 scopus 로고    scopus 로고
    • Bacterial resistance to antibiotics: enzymatic degradation and modification
    • Wright, G.D., Bacterial resistance to antibiotics: enzymatic degradation and modification. Adv. Drug Deliv. Rev. 57 (2005), 1451–1470.
    • (2005) Adv. Drug Deliv. Rev. , vol.57 , pp. 1451-1470
    • Wright, G.D.1
  • 111
    • 24044514016 scopus 로고    scopus 로고
    • Efflux-mediated antimicrobial resistance
    • Poole, K., Efflux-mediated antimicrobial resistance. J. Antimicrob. Chemother. 56 (2005), 20–51.
    • (2005) J. Antimicrob. Chemother. , vol.56 , pp. 20-51
    • Poole, K.1
  • 112
    • 84872574616 scopus 로고    scopus 로고
    • The role of the natural environment in the emergence of antibiotic resistance in gram-negative bacteria
    • Wellington, E.M.H., et al. The role of the natural environment in the emergence of antibiotic resistance in gram-negative bacteria. Lancet Infect. Dis. 13 (2013), 155–165.
    • (2013) Lancet Infect. Dis. , vol.13 , pp. 155-165
    • Wellington, E.M.H.1
  • 113
    • 84900875411 scopus 로고    scopus 로고
    • Tetracycline antibiotics and resistance mechanisms
    • Nguyen, F., et al. Tetracycline antibiotics and resistance mechanisms. Biol. Chem. 395 (2014), 559–575.
    • (2014) Biol. Chem. , vol.395 , pp. 559-575
    • Nguyen, F.1
  • 114
    • 84905118923 scopus 로고    scopus 로고
    • Fluoroquinolone resistance: mechanisms, impact on bacteria, and role in evolutionary success
    • Redgrave, L.S., et al. Fluoroquinolone resistance: mechanisms, impact on bacteria, and role in evolutionary success. Trends Microbiol. 22 (2014), 438–445.
    • (2014) Trends Microbiol. , vol.22 , pp. 438-445
    • Redgrave, L.S.1
  • 115
    • 0036047412 scopus 로고    scopus 로고
    • Bacterial conjugation: a two-step mechanism for DNA transport
    • Llosa, M., et al. Bacterial conjugation: a two-step mechanism for DNA transport. Mol. Microbiol. 45 (2002), 1–8.
    • (2002) Mol. Microbiol. , vol.45 , pp. 1-8
    • Llosa, M.1
  • 116
    • 85019437357 scopus 로고    scopus 로고
    • Embracing the enemy: the diversification of microbial gene repertoires by phage-mediated horizontal gene transfer
    • Touchon, M., et al. Embracing the enemy: the diversification of microbial gene repertoires by phage-mediated horizontal gene transfer. Curr. Opin. Microbiol. 38 (2017), 66–73.
    • (2017) Curr. Opin. Microbiol. , vol.38 , pp. 66-73
    • Touchon, M.1
  • 117
    • 85018303268 scopus 로고    scopus 로고
    • In and out – contribution of natural transformation to the shuffling of large genomic regions
    • Blokesch, M., In and out – contribution of natural transformation to the shuffling of large genomic regions. Curr. Opin. Microbiol. 38 (2017), 22–29.
    • (2017) Curr. Opin. Microbiol. , vol.38 , pp. 22-29
    • Blokesch, M.1
  • 118
    • 85020281945 scopus 로고    scopus 로고
    • Beyond the canonical strategies of horizontal gene transfer in prokaryotes
    • García-Aljaro, C., et al. Beyond the canonical strategies of horizontal gene transfer in prokaryotes. Curr. Opin. Microbiol. 38 (2017), 95–105.
    • (2017) Curr. Opin. Microbiol. , vol.38 , pp. 95-105
    • García-Aljaro, C.1
  • 119
    • 0034092993 scopus 로고    scopus 로고
    • Effects of yoghurt intake on plasmid transfer and colonisation with transconjugants in the digestive tract of mice associated with human faecal flora
    • Maisonneuve, S., et al. Effects of yoghurt intake on plasmid transfer and colonisation with transconjugants in the digestive tract of mice associated with human faecal flora. FEMS Microbiol. Ecol. 31 (2000), 241–248.
    • (2000) FEMS Microbiol. Ecol. , vol.31 , pp. 241-248
    • Maisonneuve, S.1
  • 120
    • 84856374839 scopus 로고    scopus 로고
    • Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae
    • Stecher, B., et al. Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae. Proc. Natl. Acad. Sci. U. S. A. 109 (2012), 1269–1274.
    • (2012) Proc. Natl. Acad. Sci. U. S. A. , vol.109 , pp. 1269-1274
    • Stecher, B.1
  • 121
    • 84959862900 scopus 로고    scopus 로고
    • Carriage of λ latent virus is costly for its bacterial host due to frequent reactivation in monoxenic mouse intestine
    • De Paepe, M., et al. Carriage of λ latent virus is costly for its bacterial host due to frequent reactivation in monoxenic mouse intestine. PLoS Genet., 12, 2016, e1005861.
    • (2016) PLoS Genet. , vol.12
    • De Paepe, M.1
  • 122
    • 85015281807 scopus 로고    scopus 로고
    • Inflammation boosts bacteriophage transfer between Salmonella spp
    • Diard, M., et al. Inflammation boosts bacteriophage transfer between Salmonella spp. Science 355 (2017), 1211–1215.
    • (2017) Science , vol.355 , pp. 1211-1215
    • Diard, M.1
  • 123
    • 84880831180 scopus 로고    scopus 로고
    • Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota
    • Hu, Y., et al. Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota. Nat. Commun., 4, 2013, 2151.
    • (2013) Nat. Commun. , vol.4 , pp. 2151
    • Hu, Y.1
  • 125
    • 84903167988 scopus 로고    scopus 로고
    • Horizontal gene transfer in the human gastrointestinal tract: potential spread of antibiotic resistance genes
    • Huddleston, J.R., Horizontal gene transfer in the human gastrointestinal tract: potential spread of antibiotic resistance genes. Infect. Drug Resist. 7 (2014), 167–176.
    • (2014) Infect. Drug Resist. , vol.7 , pp. 167-176
    • Huddleston, J.R.1
  • 126
    • 84860182466 scopus 로고    scopus 로고
    • The evolution of conflict resolution between plasmids and their bacterial hosts
    • Mc Ginty, S.É., Rankin, D.J., The evolution of conflict resolution between plasmids and their bacterial hosts. Evol. Int. J. Org. Evol. 66 (2012), 1662–1670.
    • (2012) Evol. Int. J. Org. Evol. , vol.66 , pp. 1662-1670
    • Mc Ginty, S.É.1    Rankin, D.J.2
  • 127
    • 84880712059 scopus 로고    scopus 로고
    • Exploring the costs of horizontal gene transfer
    • Baltrus, D.A., Exploring the costs of horizontal gene transfer. Trends Ecol. Evol. 28 (2013), 489–495.
    • (2013) Trends Ecol. Evol. , vol.28 , pp. 489-495
    • Baltrus, D.A.1
  • 128
    • 85030835290 scopus 로고    scopus 로고
    • Fitness costs of plasmids: a limit to plasmid transmission
    • Published online September 7, 2017
    • San Millan, A., MacLean, R.C., Fitness costs of plasmids: a limit to plasmid transmission. Microbiol. Spectr., 2017, 10.1128/microbiolspec.MTBP-0016-2017 Published online September 7, 2017.
    • (2017) Microbiol. Spectr.
    • San Millan, A.1    MacLean, R.C.2
  • 129
    • 2542459385 scopus 로고    scopus 로고
    • Fitness cost of SCCmec and methicillin resistance levels in Staphylococcus aureus
    • Ender, M., et al. Fitness cost of SCCmec and methicillin resistance levels in Staphylococcus aureus. Antimicrob. Agents Chemother. 48 (2004), 2295–2297.
    • (2004) Antimicrob. Agents Chemother. , vol.48 , pp. 2295-2297
    • Ender, M.1
  • 130
    • 82155201271 scopus 로고    scopus 로고
    • Bacteriophage selection against a plasmid-encoded sex apparatus leads to the loss of antibiotic-resistance plasmids
    • Jalasvuori, M., et al. Bacteriophage selection against a plasmid-encoded sex apparatus leads to the loss of antibiotic-resistance plasmids. Biol. Lett. 7 (2011), 902–905.
    • (2011) Biol. Lett. , vol.7 , pp. 902-905
    • Jalasvuori, M.1
  • 131
    • 84978128513 scopus 로고    scopus 로고
    • Multiple plasmids contribute to antibiotic resistance and macrophage survival in vitro in CMY2-bearing Salmonella enterica
    • Kempf, A.J., et al. Multiple plasmids contribute to antibiotic resistance and macrophage survival in vitro in CMY2-bearing Salmonella enterica. Foodborne Pathog. Dis. 13 (2016), 398–404.
    • (2016) Foodborne Pathog. Dis. , vol.13 , pp. 398-404
    • Kempf, A.J.1
  • 132
    • 84890117917 scopus 로고    scopus 로고
    • Large deletions in the pAtC58 megaplasmid of Agrobacterium tumefaciens can confer reduced carriage cost and increased expression of virulence genes
    • Morton, E.R., et al. Large deletions in the pAtC58 megaplasmid of Agrobacterium tumefaciens can confer reduced carriage cost and increased expression of virulence genes. Genome Biol. Evol. 5 (2013), 1353–1364.
    • (2013) Genome Biol. Evol. , vol.5 , pp. 1353-1364
    • Morton, E.R.1
  • 133
    • 84923368060 scopus 로고    scopus 로고
    • Positive selection and compensatory adaptation interact to stabilize non-transmissible plasmids
    • San Millan, A., et al. Positive selection and compensatory adaptation interact to stabilize non-transmissible plasmids. Nat. Commun., 5, 2014, 5208.
    • (2014) Nat. Commun. , vol.5 , pp. 5208
    • San Millan, A.1
  • 134
    • 84983652251 scopus 로고    scopus 로고
    • Evolved plasmid-host interactions reduce plasmid interference cost
    • Yano, H., et al. Evolved plasmid-host interactions reduce plasmid interference cost. Mol. Microbiol. 101 (2016), 743–756.
    • (2016) Mol. Microbiol. , vol.101 , pp. 743-756
    • Yano, H.1
  • 135
    • 45849099491 scopus 로고    scopus 로고
    • Adaptive plasmid evolution results in host-range expansion of a broad-host-range plasmid
    • De Gelder, L., et al. Adaptive plasmid evolution results in host-range expansion of a broad-host-range plasmid. Genetics 178 (2008), 2179–2190.
    • (2008) Genetics , vol.178 , pp. 2179-2190
    • De Gelder, L.1
  • 136
    • 84902668698 scopus 로고    scopus 로고
    • Non-additive costs and interactions alter the competitive dynamics of co-occurring ecologically distinct plasmids
    • Morton, E.R., et al. Non-additive costs and interactions alter the competitive dynamics of co-occurring ecologically distinct plasmids. Proc. Biol. Sci., 281, 2014, 20132173.
    • (2014) Proc. Biol. Sci. , vol.281
    • Morton, E.R.1
  • 137
    • 85028560430 scopus 로고    scopus 로고
    • Conjugation efficiency depends on intra and intercellular interactions between distinct plasmids: Plasmids promote the immigration of other plasmids but repress co-colonizing plasmids
    • Gama, J.A., et al. Conjugation efficiency depends on intra and intercellular interactions between distinct plasmids: Plasmids promote the immigration of other plasmids but repress co-colonizing plasmids. Plasmid 93 (2017), 6–16.
    • (2017) Plasmid , vol.93 , pp. 6-16
    • Gama, J.A.1
  • 138
    • 85019038841 scopus 로고    scopus 로고
    • Conjugative plasmids enable the maintenance of low cost non-transmissible plasmids
    • Werisch, M., et al. Conjugative plasmids enable the maintenance of low cost non-transmissible plasmids. Plasmid 91 (2017), 96–104.
    • (2017) Plasmid , vol.91 , pp. 96-104
    • Werisch, M.1
  • 139
    • 79960959549 scopus 로고    scopus 로고
    • Pervasive sign epistasis between conjugative plasmids and drug-resistance chromosomal mutations
    • Silva, R.F., et al. Pervasive sign epistasis between conjugative plasmids and drug-resistance chromosomal mutations. PLoS Genet., 7, 2011, e1002181.
    • (2011) PLoS Genet. , vol.7
    • Silva, R.F.1
  • 140
    • 0018290018 scopus 로고
    • Ribosomal ambiguity (ram) mutations facilitate dihydrostreptomycin binding to ribosomes
    • Böck, A., et al. Ribosomal ambiguity (ram) mutations facilitate dihydrostreptomycin binding to ribosomes. FEBS Lett. 104 (1979), 317–321.
    • (1979) FEBS Lett. , vol.104 , pp. 317-321
    • Böck, A.1
  • 141
    • 0029402926 scopus 로고
    • Antibiotic resistance mechanisms of mutant EF-Tu species in Escherichia coli
    • Kraal, B., et al. Antibiotic resistance mechanisms of mutant EF-Tu species in Escherichia coli. Biochem. Cell Biol. Biochim. Biol. Cell 73 (1995), 1167–1177.
    • (1995) Biochem. Cell Biol. Biochim. Biol. Cell , vol.73 , pp. 1167-1177
    • Kraal, B.1
  • 142
    • 84992109011 scopus 로고    scopus 로고
    • Sequence-specific targeting of bacterial resistance genes increases antibiotic efficacy
    • Ayhan, D.H., et al. Sequence-specific targeting of bacterial resistance genes increases antibiotic efficacy. PLoS Biol., 14, 2016, e1002552.
    • (2016) PLoS Biol. , vol.14
    • Ayhan, D.H.1
  • 143
    • 85015314938 scopus 로고    scopus 로고
    • Reversion of antibiotic resistance in Mycobacterium tuberculosis by spiroisoxazoline SMARt-420
    • Blondiaux, N., et al. Reversion of antibiotic resistance in Mycobacterium tuberculosis by spiroisoxazoline SMARt-420. Science 355 (2017), 1206–1211.
    • (2017) Science , vol.355 , pp. 1206-1211
    • Blondiaux, N.1
  • 144
    • 85035041754 scopus 로고    scopus 로고
    • Membrane microdomain disassembly inhibits MRSA antibiotic resistance
    • 1354–1367.e20
    • García-Fernández, E., et al. Membrane microdomain disassembly inhibits MRSA antibiotic resistance. Cell, 171, 2017 1354–1367.e20.
    • (2017) Cell , vol.171
    • García-Fernández, E.1
  • 145
    • 84931576329 scopus 로고    scopus 로고
    • The fitness effect of mutations across environments: Fisher's geometrical model with multiple optima
    • Martin, G., Lenormand, T., The fitness effect of mutations across environments: Fisher's geometrical model with multiple optima. Evol. Int. J. Org. Evol. 69 (2015), 1433–1447.
    • (2015) Evol. Int. J. Org. Evol. , vol.69 , pp. 1433-1447
    • Martin, G.1    Lenormand, T.2
  • 146
    • 84862840054 scopus 로고    scopus 로고
    • Cost of antibiotic resistance and the geometry of adaptation
    • Sousa, A., et al. Cost of antibiotic resistance and the geometry of adaptation. Mol. Biol. Evol. 29 (2012), 1417–1428.
    • (2012) Mol. Biol. Evol. , vol.29 , pp. 1417-1428
    • Sousa, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.