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Volumn 38, Issue , 2017, Pages 114-121

Evolution of commensal bacteria in the intestinal tract of mice

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL COLONIZATION; CARBOHYDRATE DIET; CLONAL VARIATION; COMMENSAL; COMMUNITY DYNAMICS; ECOSYSTEM; EVOLUTION; GENE MUTATION; HORIZONTAL GENE TRANSFER; IMMUNE SYSTEM; INTESTINE FLORA; LIPID DIET; MOUSE; NONHUMAN; REVIEW; SPECIES RICHNESS; SUGAR INTAKE; ADAPTATION; ANIMAL; BACTERIUM; GASTROINTESTINAL TRACT; GENETICS; MICROBIOLOGY; MOLECULAR EVOLUTION; SYMBIOSIS;

EID: 85020043148     PISSN: 13695274     EISSN: 18790364     Source Type: Journal    
DOI: 10.1016/j.mib.2017.05.007     Document Type: Review
Times cited : (27)

References (67)
  • 1
    • 0003416664 scopus 로고
    • The Prolongation of Life; Optimistic Studies
    • G.P. Putnam's Sons New York & London
    • Metchnikoff, E., Mitchell, P.C., The Prolongation of Life; Optimistic Studies. 1908, G.P. Putnam's Sons, New York & London.
    • (1908)
    • Metchnikoff, E.1    Mitchell, P.C.2
  • 2
    • 84961288867 scopus 로고    scopus 로고
    • Are we really vastly outnumbered: revisiting the ratio of bacterial to host cells in humans
    • Sender, R., Fuchs, S., Milo, R., Are we really vastly outnumbered: revisiting the ratio of bacterial to host cells in humans. Cell 164 (2016), 337–340.
    • (2016) Cell , vol.164 , pp. 337-340
    • Sender, R.1    Fuchs, S.2    Milo, R.3
  • 5
    • 84904384753 scopus 로고    scopus 로고
    • Foxp3+ T cells regulate immunoglobulin A selection and facilitate diversification of bacterial species responsible for immune homeostasis
    • Study showing that regulatory T-cells, through their effects on IgA production, lead to increased diversity of the microbiota, particularly in Clostridia (phylum Firmicutes), and that these bacteria also induce IgA production, creating a positive feedback loop between the microbiota and the host immune system.
    • Kawamoto, S., Maruya, M., Kato, L.M., Suda, W., Atarashi, K., Doi, Y., Tsutsui, Y., Qin, H., Honda, K., Okada, T., et al. Foxp3+ T cells regulate immunoglobulin A selection and facilitate diversification of bacterial species responsible for immune homeostasis. Immunity 41 (2014), 152–165 Study showing that regulatory T-cells, through their effects on IgA production, lead to increased diversity of the microbiota, particularly in Clostridia (phylum Firmicutes), and that these bacteria also induce IgA production, creating a positive feedback loop between the microbiota and the host immune system.
    • (2014) Immunity , vol.41 , pp. 152-165
    • Kawamoto, S.1    Maruya, M.2    Kato, L.M.3    Suda, W.4    Atarashi, K.5    Doi, Y.6    Tsutsui, Y.7    Qin, H.8    Honda, K.9    Okada, T.10
  • 8
    • 80052965474 scopus 로고    scopus 로고
    • Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve
    • Bravo, J.A., Forsythe, P., Chew, M.V., Escaravage, E., Savignac, H.M., Dinan, T.G., Bienenstock, J., Cryan, J.F., Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve. Proc. Natl. Acad. Sci. 108 (2011), 16050–16055.
    • (2011) Proc. Natl. Acad. Sci. , vol.108 , pp. 16050-16055
    • Bravo, J.A.1    Forsythe, P.2    Chew, M.V.3    Escaravage, E.4    Savignac, H.M.5    Dinan, T.G.6    Bienenstock, J.7    Cryan, J.F.8
  • 9
    • 84892708007 scopus 로고    scopus 로고
    • Ecological modeling from time-series inference: insight into dynamics and stability of intestinal microbiota
    • Pioneer study demonstrating how an integrative design, which combines mice experiments, microbiota 16S data and mathematical modeling, allows quantifying ecological interactions.
    • Stein, R.R., Bucci, V., Toussaint, N.C., Buffie, C.G., Rätsch, G., Pamer, E.G., Sander, C., Xavier, J.B., Ecological modeling from time-series inference: insight into dynamics and stability of intestinal microbiota. PLoS Comput. Biol., 9, 2013, e1003388 Pioneer study demonstrating how an integrative design, which combines mice experiments, microbiota 16S data and mathematical modeling, allows quantifying ecological interactions.
    • (2013) PLoS Comput. Biol. , vol.9 , pp. e1003388
    • Stein, R.R.1    Bucci, V.2    Toussaint, N.C.3    Buffie, C.G.4    Rätsch, G.5    Pamer, E.G.6    Sander, C.7    Xavier, J.B.8
  • 11
    • 0141462552 scopus 로고    scopus 로고
    • Long-term persistence of resistant Enterococcus species after antibiotics to eradicate Helicobacter pylori
    • Sjölund, M., Wreiber, K., Andersson, D.I., Blaser, M.J., Engstrand, L., Long-term persistence of resistant Enterococcus species after antibiotics to eradicate Helicobacter pylori. Ann. Intern. Med. 139 (2003), 483–487.
    • (2003) Ann. Intern. Med. , vol.139 , pp. 483-487
    • Sjölund, M.1    Wreiber, K.2    Andersson, D.I.3    Blaser, M.J.4    Engstrand, L.5
  • 13
    • 84947216877 scopus 로고    scopus 로고
    • The ecology of the microbiome: networks, competition, and stability
    • This study develops mathematical theory based on the Lotka–Volterra ecological model to understand the factors that promote microbiota stability. The theory predicts that ecosystem stability is promoted by increasing the proportion of competitive, relative to cooperative interactions, as it dampens the destabilizing effects of positive feedback loops arising from cooperation.
    • Coyte, K.Z., Schluter, J., Foster, K.R., The ecology of the microbiome: networks, competition, and stability. Science 350 (2015), 663–666 This study develops mathematical theory based on the Lotka–Volterra ecological model to understand the factors that promote microbiota stability. The theory predicts that ecosystem stability is promoted by increasing the proportion of competitive, relative to cooperative interactions, as it dampens the destabilizing effects of positive feedback loops arising from cooperation.
    • (2015) Science , vol.350 , pp. 663-666
    • Coyte, K.Z.1    Schluter, J.2    Foster, K.R.3
  • 14
    • 85020030983 scopus 로고    scopus 로고
    • Lotka–Volterra pairwise modeling fails to capture diverse pairwise microbial interactions
    • Momeni, B., Xie, L., Shou, W., Lotka–Volterra pairwise modeling fails to capture diverse pairwise microbial interactions. eLife, 6, 2017.
    • (2017) eLife , vol.6
    • Momeni, B.1    Xie, L.2    Shou, W.3
  • 15
    • 0018868854 scopus 로고
    • Single-nutrient microbial competition: qualitative agreement between experimental and theoretically forecast outcomes
    • Hansen, S.R., Hubbell, S.P., Single-nutrient microbial competition: qualitative agreement between experimental and theoretically forecast outcomes. Science 207 (1980), 1491–1493.
    • (1980) Science , vol.207 , pp. 1491-1493
    • Hansen, S.R.1    Hubbell, S.P.2
  • 17
    • 41849127118 scopus 로고    scopus 로고
    • Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome
    • Turnbaugh, P.J., Bäckhed, F., Fulton, L., Gordon, J.I., Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome. Cell Host Microbe 3 (2008), 213–223.
    • (2008) Cell Host Microbe , vol.3 , pp. 213-223
    • Turnbaugh, P.J.1    Bäckhed, F.2    Fulton, L.3    Gordon, J.I.4
  • 20
    • 84866167497 scopus 로고    scopus 로고
    • Reciprocal interactions of the intestinal microbiota and immune system
    • Maynard, C.L., Elson, C.O., Hatton, R.D., Weaver, C.T., Reciprocal interactions of the intestinal microbiota and immune system. Nature 489 (2012), 231–241.
    • (2012) Nature , vol.489 , pp. 231-241
    • Maynard, C.L.1    Elson, C.O.2    Hatton, R.D.3    Weaver, C.T.4
  • 21
    • 58549111588 scopus 로고    scopus 로고
    • Paneth cells directly sense gut commensals and maintain homeostasis at the intestinal host-microbial interface
    • Vaishnava, S., Behrendt, C.L., Ismail, A.S., Eckmann, L., Hooper, L.V., Paneth cells directly sense gut commensals and maintain homeostasis at the intestinal host-microbial interface. Proc. Natl. Acad. Sci. 105 (2008), 20858–20863.
    • (2008) Proc. Natl. Acad. Sci. , vol.105 , pp. 20858-20863
    • Vaishnava, S.1    Behrendt, C.L.2    Ismail, A.S.3    Eckmann, L.4    Hooper, L.V.5
  • 22
    • 84893370250 scopus 로고    scopus 로고
    • Identifying gut microbe–host phenotype relationships using combinatorial communities in gnotobiotic mice
    • 220ra11–220ra11
    • Faith, J.J., Ahern, P.P., Ridaura, V.K., Cheng, J., Gordon, J.I., Identifying gut microbe–host phenotype relationships using combinatorial communities in gnotobiotic mice. Sci. Transl. Med., 6, 2014 220ra11–220ra11.
    • (2014) Sci. Transl. Med. , vol.6
    • Faith, J.J.1    Ahern, P.P.2    Ridaura, V.K.3    Cheng, J.4    Gordon, J.I.5
  • 25
    • 0342383237 scopus 로고
    • Effects of linkage on rates of molecular evolution
    • Birky, C.W., Walsh, J.B., Effects of linkage on rates of molecular evolution. Proc. Natl. Acad. Sci. U. S. A. 85 (1988), 6414–6418.
    • (1988) Proc. Natl. Acad. Sci. U. S. A. , vol.85 , pp. 6414-6418
    • Birky, C.W.1    Walsh, J.B.2
  • 26
    • 0003867285 scopus 로고    scopus 로고
    • Population Genetics: A Concise Guide
    • Johns Hopkins University Press
    • Gillespie, J.H., Population Genetics: A Concise Guide. 2004, Johns Hopkins University Press.
    • (2004)
    • Gillespie, J.H.1
  • 27
    • 0032955085 scopus 로고    scopus 로고
    • Estimation of growth rates of Escherichia coli BJ4 in streptomycin-treated and previously germfree mice by in situ rRNA hybridization
    • Rang, C.U., Licht, T.R., Midtvedt, T., Conway, P.L., Chao, L., Krogfelt, K.A., Cohen, P.S., Molin, S., Estimation of growth rates of Escherichia coli BJ4 in streptomycin-treated and previously germfree mice by in situ rRNA hybridization. Clin. Diagn. Lab. Immunol. 6 (1999), 434–436.
    • (1999) Clin. Diagn. Lab. Immunol. , vol.6 , pp. 434-436
    • Rang, C.U.1    Licht, T.R.2    Midtvedt, T.3    Conway, P.L.4    Chao, L.5    Krogfelt, K.A.6    Cohen, P.S.7    Molin, S.8
  • 28
    • 84948657224 scopus 로고    scopus 로고
    • A distributed cell division counter reveals growth dynamics in the gut microbiota
    • Myhrvold, C., Kotula, J.W., Hicks, W.M., Conway, N.J., Silver, P.A., A distributed cell division counter reveals growth dynamics in the gut microbiota. Nat. Commun., 6, 2015, 10039.
    • (2015) Nat. Commun. , vol.6 , pp. 10039
    • Myhrvold, C.1    Kotula, J.W.2    Hicks, W.M.3    Conway, N.J.4    Silver, P.A.5
  • 29
    • 0025886466 scopus 로고
    • A constant rate of spontaneous mutation in DNA-based microbes
    • Drake, J.W., A constant rate of spontaneous mutation in DNA-based microbes. Proc. Natl. Acad. Sci. U. S. A. 88 (1991), 7160–7164.
    • (1991) Proc. Natl. Acad. Sci. U. S. A. , vol.88 , pp. 7160-7164
    • Drake, J.W.1
  • 31
    • 84993237044 scopus 로고    scopus 로고
    • Experimental evolution as an underutilized tool for studying beneficial animal–microbe interactions
    • Hoang, K.L., Morran, L.T., Gerardo, N.M., Experimental evolution as an underutilized tool for studying beneficial animal–microbe interactions. Front. Microbiol., 7, 2016.
    • (2016) Front. Microbiol. , vol.7
    • Hoang, K.L.1    Morran, L.T.2    Gerardo, N.M.3
  • 32
    • 79959827651 scopus 로고    scopus 로고
    • Trade-off between bile resistance and nutritional competence drives Escherichia coli diversification in the mouse gut
    • De Paepe, M., Gaboriau-Routhiau, V., Rainteau, D., Rakotobe, S., Taddei, F., Cerf-Bensussan, N., Trade-off between bile resistance and nutritional competence drives Escherichia coli diversification in the mouse gut. PLoS Genet., 7, 2011, e1002107.
    • (2011) PLoS Genet. , vol.7 , pp. e1002107
    • De Paepe, M.1    Gaboriau-Routhiau, V.2    Rainteau, D.3    Rakotobe, S.4    Taddei, F.5    Cerf-Bensussan, N.6
  • 34
    • 84890281518 scopus 로고    scopus 로고
    • Gnotobiotic mouse model of phage-bacterial host dynamics in the human gut
    • Reyes, A., Wu, M., McNulty, N.P., Rohwer, F.L., Gordon, J.I., Gnotobiotic mouse model of phage-bacterial host dynamics in the human gut. Proc. Natl. Acad. Sci. 110 (2013), 20236–20241.
    • (2013) Proc. Natl. Acad. Sci. , vol.110 , pp. 20236-20241
    • Reyes, A.1    Wu, M.2    McNulty, N.P.3    Rohwer, F.L.4    Gordon, J.I.5
  • 35
    • 84948807962 scopus 로고    scopus 로고
    • Adaptive immunity increases the pace and predictability of evolutionary change in commensal gut bacteria
    • Barroso-Batista, J., Demengeot, J., Gordo, I., Adaptive immunity increases the pace and predictability of evolutionary change in commensal gut bacteria. Nat. Commun., 6, 2015, 8945.
    • (2015) Nat. Commun. , vol.6 , pp. 8945
    • Barroso-Batista, J.1    Demengeot, J.2    Gordo, I.3
  • 36
    • 85103043464 scopus 로고    scopus 로고
    • Commensal and pathogenic Escherichia coli metabolism in the gut
    • T. Conway P.S. Cohen American Society of Microbiology
    • Conway, T., Cohen, P.S., Commensal and pathogenic Escherichia coli metabolism in the gut. Conway, T., Cohen, P.S., (eds.) Metabolism and Bacterial Pathogenesis, 2015, American Society of Microbiology, 343–362.
    • (2015) Metabolism and Bacterial Pathogenesis , pp. 343-362
    • Conway, T.1    Cohen, P.S.2
  • 38
    • 0035970874 scopus 로고    scopus 로고
    • Costs and benefits of high mutation rates: adaptive evolution of bacteria in the mouse gut
    • Giraud, A., Costs and benefits of high mutation rates: adaptive evolution of bacteria in the mouse gut. Science 291 (2001), 2606–2608.
    • (2001) Science , vol.291 , pp. 2606-2608
    • Giraud, A.1
  • 39
    • 84897389131 scopus 로고    scopus 로고
    • The first steps of adaptation of Escherichia coli to the gut are dominated by soft sweeps
    • Using the tools of experimental evolution, this study demonstrates that rapid evolutionary change and intense clonal interference can occur in commensal species colonizing the mammalian gut. This work provides the first estimates of the rate and fitness effects of beneficial mutations in this ecosystem.
    • Barroso-Batista, J., Sousa, A., Lourenço, M., Bergman, M.-L., Sobral, D., Demengeot, J., Xavier, K.B., Gordo, I., The first steps of adaptation of Escherichia coli to the gut are dominated by soft sweeps. PLoS Genet., 10, 2014, e1004182 Using the tools of experimental evolution, this study demonstrates that rapid evolutionary change and intense clonal interference can occur in commensal species colonizing the mammalian gut. This work provides the first estimates of the rate and fitness effects of beneficial mutations in this ecosystem.
    • (2014) PLoS Genet. , vol.10 , pp. e1004182
    • Barroso-Batista, J.1    Sousa, A.2    Lourenço, M.3    Bergman, M.-L.4    Sobral, D.5    Demengeot, J.6    Xavier, K.B.7    Gordo, I.8
  • 40
    • 85000644795 scopus 로고    scopus 로고
    • A mutational hotspot and strong selection contribute to the order of mutations selected for during Escherichia coli adaptation to the gut
    • Lourenço, M., Ramiro, R.S., Güleresi, D., Barroso-Batista, J., Xavier, K.B., Gordo, I., Sousa, A., A mutational hotspot and strong selection contribute to the order of mutations selected for during Escherichia coli adaptation to the gut. PLOS Genet., 12, 2016, e1006420.
    • (2016) PLOS Genet. , vol.12 , pp. e1006420
    • Lourenço, M.1    Ramiro, R.S.2    Güleresi, D.3    Barroso-Batista, J.4    Xavier, K.B.5    Gordo, I.6    Sousa, A.7
  • 41
    • 84991627393 scopus 로고    scopus 로고
    • Using long-term experimental evolution to uncover the patterns and determinants of molecular evolution of an Escherichia coli natural isolate in the streptomycin-treated mouse gut
    • Study of long-term evolution of a human commensalE. coli in the mouse intestine, demonstrating a pattern of evolutionary parallelism and pinpointing the role of epistasis between adaptive mutations.
    • Lescat, M., Launay, A., Ghalayini, M., Magnan, M., Glodt, J., Pintard, C., Dion, S., Denamur, E., Tenaillon, O., Using long-term experimental evolution to uncover the patterns and determinants of molecular evolution of an Escherichia coli natural isolate in the streptomycin-treated mouse gut. Mol. Ecol. 26 (2016), 1802–1817, 10.1111/mec.13851 Study of long-term evolution of a human commensalE. coli in the mouse intestine, demonstrating a pattern of evolutionary parallelism and pinpointing the role of epistasis between adaptive mutations.
    • (2016) Mol. Ecol. , vol.26 , pp. 1802-1817
    • Lescat, M.1    Launay, A.2    Ghalayini, M.3    Magnan, M.4    Glodt, J.5    Pintard, C.6    Dion, S.7    Denamur, E.8    Tenaillon, O.9
  • 42
    • 28444483927 scopus 로고    scopus 로고
    • Mouse intestine selects nonmotile flhDC mutants of Escherichia coli MG1655 with increased colonizing ability and better utilization of carbon sources
    • Leatham, M.P., Stevenson, S.J., Gauger, E.J., Krogfelt, K.A., Lins, J.J., Haddock, T.L., Autieri, S.M., Conway, T., Cohen, P.S., Mouse intestine selects nonmotile flhDC mutants of Escherichia coli MG1655 with increased colonizing ability and better utilization of carbon sources. Infect. Immun. 73 (2005), 8039–8049.
    • (2005) Infect. Immun. , vol.73 , pp. 8039-8049
    • Leatham, M.P.1    Stevenson, S.J.2    Gauger, E.J.3    Krogfelt, K.A.4    Lins, J.J.5    Haddock, T.L.6    Autieri, S.M.7    Conway, T.8    Cohen, P.S.9
  • 43
    • 79959400835 scopus 로고    scopus 로고
    • Genotype and phenotypes of an intestine-adapted Escherichia coli K-12 mutant selected by animal passage for superior colonization
    • Fabich, A.J., Leatham, M.P., Grissom, J.E., Wiley, G., Lai, H., Najar, F., Roe, B.A., Cohen, P.S., Conway, T., Genotype and phenotypes of an intestine-adapted Escherichia coli K-12 mutant selected by animal passage for superior colonization. Infect. Immun. 79 (2011), 2430–2439.
    • (2011) Infect. Immun. , vol.79 , pp. 2430-2439
    • Fabich, A.J.1    Leatham, M.P.2    Grissom, J.E.3    Wiley, G.4    Lai, H.5    Najar, F.6    Roe, B.A.7    Cohen, P.S.8    Conway, T.9
  • 45
  • 46
    • 67650080596 scopus 로고    scopus 로고
    • Precolonized human commensal Escherichia coli strains serve as a barrier to E. coli O157:H7 growth in the streptomycin-treated mouse intestine
    • Leatham, M.P., Banerjee, S., Autieri, S.M., Mercado-Lubo, R., Conway, T., Cohen, P.S., Precolonized human commensal Escherichia coli strains serve as a barrier to E. coli O157:H7 growth in the streptomycin-treated mouse intestine. Infect. Immun. 77 (2009), 2876–2886.
    • (2009) Infect. Immun. , vol.77 , pp. 2876-2886
    • Leatham, M.P.1    Banerjee, S.2    Autieri, S.M.3    Mercado-Lubo, R.4    Conway, T.5    Cohen, P.S.6
  • 47
    • 0020700626 scopus 로고
    • Survival and implantation of Escherichia coli in the intestinal tract
    • Freter, R., Brickner, H., Fekete, J., Vickerman, M.M., Carey, K.E., Survival and implantation of Escherichia coli in the intestinal tract. Infect. Immun. 39 (1983), 686–703.
    • (1983) Infect. Immun. , vol.39 , pp. 686-703
    • Freter, R.1    Brickner, H.2    Fekete, J.3    Vickerman, M.M.4    Carey, K.E.5
  • 48
    • 84881249747 scopus 로고    scopus 로고
    • Colonization resistance and microbial ecophysiology: using gnotobiotic mouse models and single-cell technology to explore the intestinal jungle
    • Stecher, B., Berry, D., Loy, A., Colonization resistance and microbial ecophysiology: using gnotobiotic mouse models and single-cell technology to explore the intestinal jungle. FEMS Microbiol. Rev. 37 (2013), 793–829.
    • (2013) FEMS Microbiol. Rev. , vol.37 , pp. 793-829
    • Stecher, B.1    Berry, D.2    Loy, A.3
  • 49
    • 0002431711 scopus 로고
    • Factors affecting the microecology of the gut
    • Springer Netherlands
    • Freter, R., Factors affecting the microecology of the gut. Probiotics, 1992, Springer, Netherlands, 111–144.
    • (1992) Probiotics , pp. 111-144
    • Freter, R.1
  • 50
    • 0026027580 scopus 로고
    • Inducible transfer of conjugative transposon Tn1545 from Enterococcus faecalis to Listeria monocytogenes in the digestive tracts of gnotobiotic mice
    • Doucet-Populaire, F., Trieu-Cuot, P., Dosbaa, I., Andremont, A., Courvalin, P., Inducible transfer of conjugative transposon Tn1545 from Enterococcus faecalis to Listeria monocytogenes in the digestive tracts of gnotobiotic mice. Antimicrob. Agents Chemother. 35 (1991), 185–187.
    • (1991) Antimicrob. Agents Chemother. , vol.35 , pp. 185-187
    • Doucet-Populaire, F.1    Trieu-Cuot, P.2    Dosbaa, I.3    Andremont, A.4    Courvalin, P.5
  • 51
    • 77049127826 scopus 로고    scopus 로고
    • Comparative metagenomic analysis of plasmid encoded functions in the human gut microbiome
    • Jones, B.V., Sun, F., Marchesi, J.R., Comparative metagenomic analysis of plasmid encoded functions in the human gut microbiome. BMC Genomics, 11, 2010, 46.
    • (2010) BMC Genomics , vol.11 , pp. 46
    • Jones, B.V.1    Sun, F.2    Marchesi, J.R.3
  • 52
    • 48249151749 scopus 로고    scopus 로고
    • Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
    • Dagan, T., Artzy-Randrup, Y., Martin, W., Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution. Proc. Natl. Acad. Sci. 105 (2008), 10039–10044.
    • (2008) Proc. Natl. Acad. Sci. , vol.105 , pp. 10039-10044
    • Dagan, T.1    Artzy-Randrup, Y.2    Martin, W.3
  • 53
    • 84864296504 scopus 로고    scopus 로고
    • New perspectives into bacterial DNA transfer to human cells
    • Llosa, M., Schröder, G., Dehio, C., New perspectives into bacterial DNA transfer to human cells. Trends Microbiol. 20 (2012), 355–359.
    • (2012) Trends Microbiol. , vol.20 , pp. 355-359
    • Llosa, M.1    Schröder, G.2    Dehio, C.3
  • 54
    • 83055186603 scopus 로고    scopus 로고
    • Ecology drives a global network of gene exchange connecting the human microbiome
    • Smillie, C.S., Smith, M.B., Friedman, J., Cordero, O.X., David, L.A., Alm, E.J., Ecology drives a global network of gene exchange connecting the human microbiome. Nature 480 (2011), 241–244.
    • (2011) Nature , vol.480 , pp. 241-244
    • Smillie, C.S.1    Smith, M.B.2    Friedman, J.3    Cordero, O.X.4    David, L.A.5    Alm, E.J.6
  • 55
    • 0030924545 scopus 로고    scopus 로고
    • Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria
    • Vulić, M., Dionisio, F., Taddei, F., Radman, M., Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria. Proc. Natl. Acad. Sci. U. S. A. 94 (1997), 9763–9767.
    • (1997) Proc. Natl. Acad. Sci. U. S. A. , vol.94 , pp. 9763-9767
    • Vulić, M.1    Dionisio, F.2    Taddei, F.3    Radman, M.4
  • 56
    • 33750607431 scopus 로고    scopus 로고
    • Of what use is sex to bacteria?
    • Narra, H.P., Ochman, H., Of what use is sex to bacteria?. Curr. Biol. 16 (2006), R705–R710.
    • (2006) Curr. Biol. , vol.16 , pp. R705-R710
    • Narra, H.P.1    Ochman, H.2
  • 57
    • 63149179892 scopus 로고    scopus 로고
    • Gene transfer events and their occurrence in selected environments
    • Kelly, B.G., Vespermann, A., Bolton, D.J., Gene transfer events and their occurrence in selected environments. Food Chem. Toxicol. 47 (2009), 978–983.
    • (2009) Food Chem. Toxicol. , vol.47 , pp. 978-983
    • Kelly, B.G.1    Vespermann, A.2    Bolton, D.J.3
  • 58
    • 84867918293 scopus 로고    scopus 로고
    • The human microbiome: a hot spot of microbial horizontal gene transfer
    • Liu, L., Chen, X., Skogerbø, G., Zhang, P., Chen, R., He, S., Huang, D.-W., The human microbiome: a hot spot of microbial horizontal gene transfer. Genomics 100 (2012), 265–270.
    • (2012) Genomics , vol.100 , pp. 265-270
    • Liu, L.1    Chen, X.2    Skogerbø, G.3    Zhang, P.4    Chen, R.5    He, S.6    Huang, D.-W.7
  • 59
    • 0033670249 scopus 로고    scopus 로고
    • Horizontal gene transfer in bacterial and archaeal complete genomes
    • Garcia-Vallvé, S., Romeu, A., Palau, J., Horizontal gene transfer in bacterial and archaeal complete genomes. Genome Res. 10 (2000), 1719–1725.
    • (2000) Genome Res. , vol.10 , pp. 1719-1725
    • Garcia-Vallvé, S.1    Romeu, A.2    Palau, J.3
  • 60
    • 0030994798 scopus 로고    scopus 로고
    • Amelioration of bacterial genomes: rates of change and exchange
    • Lawrence, J.G., Ochman, H., Amelioration of bacterial genomes: rates of change and exchange. J. Mol. Evol. 44 (1997), 383–397.
    • (1997) J. Mol. Evol. , vol.44 , pp. 383-397
    • Lawrence, J.G.1    Ochman, H.2
  • 61
    • 0026332291 scopus 로고
    • Evidence for horizontal gene transfer in Escherichia coli speciation
    • Médigue, C., Rouxel, T., Vigier, P., Hénaut, A., Danchin, A., Evidence for horizontal gene transfer in Escherichia coli speciation. J. Mol. Biol. 222 (1991), 851–856.
    • (1991) J. Mol. Biol. , vol.222 , pp. 851-856
    • Médigue, C.1    Rouxel, T.2    Vigier, P.3    Hénaut, A.4    Danchin, A.5
  • 62
    • 0034092993 scopus 로고    scopus 로고
    • Effects of yoghurt intake on plasmid transfer and colonisation with transconjugants in the digestive tract of mice associated with human faecal flora
    • Maisonneuve, S., Ouriet, M., Duval-Iflah, Y., Effects of yoghurt intake on plasmid transfer and colonisation with transconjugants in the digestive tract of mice associated with human faecal flora. FEMS Microbiol. Ecol. 31 (2000), 241–248.
    • (2000) FEMS Microbiol. Ecol. , vol.31 , pp. 241-248
    • Maisonneuve, S.1    Ouriet, M.2    Duval-Iflah, Y.3
  • 65
    • 84959862900 scopus 로고    scopus 로고
    • Carriage of λ latent virus is costly for its bacterial host due to frequent reactivation in monoxenic mouse intestine
    • Pioneer study quantifying the rate of transfer of temperate phages in the gut. This study also shows that the bacteria carrying temperate phages pay a fitness cost due to the high induction rate in the mouse intestine.
    • De Paepe, M., Tournier, L., Moncaut, E., Son, O., Langella, P., Petit, M.-A., Carriage of λ latent virus is costly for its bacterial host due to frequent reactivation in monoxenic mouse intestine. PLOS Genet., 12, 2016, e1005861 Pioneer study quantifying the rate of transfer of temperate phages in the gut. This study also shows that the bacteria carrying temperate phages pay a fitness cost due to the high induction rate in the mouse intestine.
    • (2016) PLOS Genet. , vol.12 , pp. e1005861
    • De Paepe, M.1    Tournier, L.2    Moncaut, E.3    Son, O.4    Langella, P.5    Petit, M.-A.6
  • 66
    • 84868338851 scopus 로고    scopus 로고
    • High levels of genetic recombination during nasopharyngeal carriage and biofilm formation in Streptococcus pneumoniae
    • e00200-12-e00200-12
    • Marks, L.R., Reddinger, R.M., Hakansson, A.P., High levels of genetic recombination during nasopharyngeal carriage and biofilm formation in Streptococcus pneumoniae. mBio, 3, 2012 e00200-12-e00200-12.
    • (2012) mBio , vol.3
    • Marks, L.R.1    Reddinger, R.M.2    Hakansson, A.P.3
  • 67
    • 38949179514 scopus 로고    scopus 로고
    • Lack of detectable DNA uptake by bacterial gut isolates grown in vitro and by Acinetobacter baylyi colonizing rodents in vivo
    • Nordgård, L., Nguyen, T., Midtvedt, T., Benno, Y., Traavik, T., Nielsen, K.M., Lack of detectable DNA uptake by bacterial gut isolates grown in vitro and by Acinetobacter baylyi colonizing rodents in vivo. Environ. Biosaf. Res. 6 (2007), 149–160.
    • (2007) Environ. Biosaf. Res. , vol.6 , pp. 149-160
    • Nordgård, L.1    Nguyen, T.2    Midtvedt, T.3    Benno, Y.4    Traavik, T.5    Nielsen, K.M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.