메뉴 건너뛰기




Volumn 477, Issue 7365, 2011, Pages 471-476

Synthetic chromosome arms function in yeast and generate phenotypic diversity by design

(15)  Dymond, Jessica S a,f   Richardson, Sarah M a   Coombes, Candice E a   Babatz, Timothy a   Muller, Héloïse b   Annaluru, Narayana b   Blake, William J c,g   Schwerzmann, Joy W b,h   Dai, Junbiao a,i   Lindstrom, Derek L d,j   Boeke, Annabel C a,k   Gottschling, Daniel E d   Chandrasegaran, Srinivasan b   Bader, Joel S a,e   Boeke, Jef D a  


Author keywords

[No Author keywords available]

Indexed keywords

DNA; FUNGAL RNA; TRANSFER RNA;

EID: 80053132391     PISSN: 00280836     EISSN: 14764687     Source Type: Journal    
DOI: 10.1038/nature10403     Document Type: Article
Times cited : (368)

References (29)
  • 1
    • 2442671716 scopus 로고    scopus 로고
    • A highly active synthetic mammalian retrotransposon
    • DOI 10.1038/nature02535
    • Han, J. S. & Boeke, J. D. A highly active synthetic mammalian retrotransposon. Nature 429, 314-318 (2004). (Pubitemid 38684818)
    • (2004) Nature , vol.429 , Issue.6989 , pp. 314-318
    • Han, J.S.1    Boeke, J.D.2
  • 2
    • 33645514473 scopus 로고    scopus 로고
    • GeneDesign: Rapid, automated design of multikilobase synthetic genes
    • Richardson, S. M.,Wheelan, S. J., Yarrington, R. M.&Boeke, J. D.GeneDesign: rapid, automated design of multikilobase synthetic genes. Genome Res. 16, 550-556 (2006).
    • (2006) Genome Res. , vol.16 , pp. 550-556
    • Richardson, M.1    Wheelan, S.S.J.2    Yarrington, R.M.3    Boeke, J.D.4
  • 3
  • 5
    • 58149510036 scopus 로고    scopus 로고
    • One-step assembly in yeast of 25 overlappingDNA fragments to form a complete synthetic Mycoplasma genitalium genome
    • Gibson, D. G., et al.One-step assembly in yeast of 25 overlappingDNA fragments to form a complete synthetic Mycoplasma genitalium genome. Proc. Natl Acad. Sci. USA 105, 20404-20409 (2008).
    • (2008) Proc. Natl Acad. Sci. USA , vol.105 , pp. 20404-20409
    • Gibson, D.G.1
  • 6
    • 77953584054 scopus 로고    scopus 로고
    • Creation of a bacterial cell controlled by a chemically synthesized genome
    • Gibson, D. G., et al. Creation of a bacterial cell controlled by a chemically synthesized genome. Science 329, 52-56 (2010).
    • (2010) Science , vol.329 , pp. 52-56
    • Gibson, D.G.1
  • 7
    • 70349324305 scopus 로고    scopus 로고
    • Creating bacterial strains from genomes that have been cloned and engineered in yeast
    • Lartigue, C., et al. Creating bacterial strains from genomes that have been cloned and engineered in yeast. Science 325, 1693-1696 (2009).
    • (2009) Science , vol.325 , pp. 1693-1696
    • Lartigue, C.1
  • 8
    • 0027192351 scopus 로고
    • Hotspots for unselected Ty1 transposition events on yeast chromosome III are near tRNA genes and LTR sequences
    • DOI 10.1016/0092-8674(93)90278-X
    • Ji, H., et al.Hotspots for unselected Ty1 transposition events on yeast chromosome III are near tRNA genes and LTR sequences. Cell 73, 1007-1018 (1993). (Pubitemid 23165615)
    • (1993) Cell , vol.73 , Issue.5 , pp. 1007-1018
    • Ji, H.1    Moore, D.P.2    Biomberg, M.A.3    Bralterman, L.T.4    Voytas, D.F.5    Natsoulis, G.6    Boeke, J.D.7
  • 9
    • 30944462801 scopus 로고    scopus 로고
    • Cycles of chromosome instability are associated with a fragile site and are increased by defects in DNA replication and checkpoint controls in yeast
    • DOI 10.1101/gad.1392506
    • Admire, A., et al. Cycles of chromosome instability are associated with a fragile site and are increased by defects in DNA replication and checkpoint controls in yeast. Genes Dev. 20, 159-173 (2006). (Pubitemid 43112935)
    • (2006) Genes and Development , vol.20 , Issue.2 , pp. 159-173
    • Admire, A.1    Shanks, L.2    Danzl, N.3    Wang, M.4    Weier, U.5    Stevens, W.6    Hunt, E.7    Weinert, T.8
  • 11
    • 80052165817 scopus 로고    scopus 로고
    • Expanding the genetic code of Escherichia coli with phosphoserine
    • Park, H., et al. Expanding the genetic code of Escherichia coli with phosphoserine. Science 333, 1151-1154 (2011).
    • (2011) Science , vol.333 , pp. 1151-1154
    • Park, H.1
  • 12
    • 79960502359 scopus 로고    scopus 로고
    • Precise manipulation of chromosomes in vivo enables genomewide codon replacement
    • Isaacs, F. J., et al. Precise manipulation of chromosomes in vivo enables genomewide codon replacement. Science 333, 348-353 (2011).
    • (2011) Science , vol.333 , pp. 348-353
    • Isaacs, F.J.1
  • 13
    • 0023046599 scopus 로고
    • The role of the loxP spacer region in P1 site-specific recombination
    • Hoess, R. H., Wierzbicki, A. & Abremski, K. The role of the loxP spacer region in P1 site-specific recombination. Nucleic Acids Res. 14, 2287-2300 (1986).
    • (1986) Nucleic Acids Res. , vol.14 , pp. 2287-2300
    • Hoess, R.H.1    Wierzbicki, A.2    Abremski, K.3
  • 15
    • 70649106968 scopus 로고    scopus 로고
    • The mother enrichment program: A genetic systemfor facile replicative life span analysis in Saccharomyces cerevisiae
    • Lindstrom, D. L. & Gottschling, D. E. The mother enrichment program: a genetic systemfor facile replicative life span analysis in Saccharomyces cerevisiae. Genetics 183, 413-422 (2009).
    • (2009) Genetics , vol.183 , pp. 413-422
    • Lindstrom, D.L.1    Gottschling, D.E.2
  • 16
    • 0029944825 scopus 로고    scopus 로고
    • A heteromeric complex containing the centromere binding factor 1 and two basic leucine zipper factors, Met4 and Met28, mediates the transcription activation of yeast sulfur metabolism
    • Kuras, L., Cherest, H., Surdin-Kerjan, Y. & Thomas, D. A heteromeric complex containing the centromere binding factor 1 and two basic leucine zipper factors, Met4 andMet28,mediates the transcription activation of yeast sulfurmetabolism. EMBO J. 15, 2519-2529 (1996). (Pubitemid 26151191)
    • (1996) EMBO Journal , vol.15 , Issue.10 , pp. 2519-2529
    • Kuras, L.1    Cherest, H.2    Surdin-Kerjan, Y.3    Thomas, D.4
  • 17
    • 0017886563 scopus 로고
    • Purification and characterization of saccharopine dehydrogenase from baker's yeast
    • Ogawa, H. & Fujioka, M. Purification and characterization of saccharopine dehydrogenase from bakers yeast. J. Biol. Chem. 253, 3666-3670 (1978). (Pubitemid 8346561)
    • (1978) Journal of Biological Chemistry , vol.253 , Issue.10 , pp. 3666-3670
    • Ogawa, H.1    Fujioka, M.2
  • 18
    • 84867695709 scopus 로고    scopus 로고
    • Isolation of BAC DNA fromsmall-scale cultures
    • doi:10.1101/pdb.prot4006
    • Sambrook, J. & Russell, D. W. Isolation of BAC DNA fromsmall-scale cultures. Cold Spring Harb. Protoc. doi:10.1101/pdb.prot4006 (2006).
    • (2006) Cold Spring Harb. Protoc.
    • Sambrook, J.1    Russell, D.W.2
  • 19
    • 79959316678 scopus 로고    scopus 로고
    • Preparation of yeast DNA
    • Ch. 13, Unit 13.11
    • Hoffman, C. S. Preparation of yeast DNA. Curr. Protoc. Mol. Biol. Ch. 13, Unit 13.11 (2001).
    • (2001) Curr. Protoc. Mol. Biol.
    • Hoffman, C.S.1
  • 20
    • 0021799352 scopus 로고
    • Ty elements transpose through an RNA intermediate
    • Boeke, J. D., Garfinkel, D. J., Styles, C. A.&Fink, G. R. Ty elements transpose through an RNA intermediate. Cell 40, 491-500 (1985). (Pubitemid 15076566)
    • (1985) Cell , vol.40 , Issue.3 , pp. 491-500
    • Boeke, J.D.1    Garfinkel, D.J.2    Styles, C.A.3    Fink, G.R.4
  • 21
    • 0021153574 scopus 로고
    • Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis
    • Schwartz, D. C. & Cantor, C. R. Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis. Cell 37, 67-75 (1984). (Pubitemid 14079837)
    • (1984) Cell , vol.37 , Issue.1 , pp. 67-75
    • Schwartz, D.C.1    Cantor, C.R.2
  • 22
    • 14844286404 scopus 로고    scopus 로고
    • Chromosomal translocations in yeast induced by low levels of DNA polymerase: A model for chromosome fragile sites
    • DOI 10.1016/j.cell.2004.12.039
    • Lemoine, F. J., Degtyareva, N. P., Lobachev, K. & Petes, T. D. Chromosomal translocations in yeast induced by low levels of DNA polymerase: a model for chromosome fragile sites. Cell 120, 587-598 (2005). (Pubitemid 40343072)
    • (2005) Cell , vol.120 , Issue.5 , pp. 587-598
    • Lemoine, F.J.1    Degtyareva, N.P.2    Lobachev, K.3    Petes, T.D.4
  • 23
    • 0029417194 scopus 로고
    • The chromosome ends of Saccharomyces cerevisiae
    • Louis, E. J. The chromosome ends of Saccharomyces cerevisiae. Yeast 11, 1553-1573 (1995).
    • (1995) Yeast , vol.11 , pp. 1553-1573
    • Louis, E.J.1
  • 24
    • 48249124553 scopus 로고    scopus 로고
    • Deletion of many yeast introns reveals a minority of genes that require splicing for function
    • Parenteau, J., et al. Deletion of many yeast introns reveals a minority of genes that require splicing for function. Mol. Biol. Cell 19, 1932-1941 (2008).
    • (2008) Mol. Biol. Cell , vol.19 , pp. 1932-1941
    • Parenteau, J.1
  • 25
    • 17444449538 scopus 로고    scopus 로고
    • Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae
    • DOI 10.1006/jmbi.1997.0942
    • Percudani, R., Pavesi, A. & Ottonello, S. Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J. Mol. Biol. 268, 322-330 (1997). (Pubitemid 27208057)
    • (1997) Journal of Molecular Biology , vol.268 , Issue.2 , pp. 322-330
    • Percudani, R.1    Pavesi, A.2    Ottonello, S.3
  • 26
    • 61549086812 scopus 로고    scopus 로고
    • Teaching synthetic biology, bioinformatics and engineering to undergraduates: The interdisciplinary build-a-genome course
    • Dymond, J. S., et al. Teaching synthetic biology, bioinformatics and engineering to undergraduates: the interdisciplinary build-a-genome course. Genetics 181, 13-21 (2009).
    • (2009) Genetics , vol.181 , pp. 13-21
    • Dymond, J.S.1
  • 27
    • 0030966330 scopus 로고    scopus 로고
    • A review of phenotypes in Saccharomyces cerevisiae
    • DOI 10.1002/(SICI)1097-0061(19970930)13:12<1099::AID-YEA177>3.0. CO;2-7
    • Hampsey, M. A review of phenotypes in Saccharomyces cerevisiae. Yeast 13, 1099-1133 (1997). (Pubitemid 27376794)
    • (1997) Yeast , vol.13 , Issue.12 , pp. 1099-1133
    • Hampsey, M.1
  • 29
    • 77952477753 scopus 로고    scopus 로고
    • Pairwise selection assembly for sequence-independent construction of long-length DNA
    • Blake, W. J., et al. Pairwise selection assembly for sequence-independent construction of long-length DNA. Nucleic Acids Res. 38, 2594-2602 (2010).
    • (2010) Nucleic Acids Res. , vol.38 , pp. 2594-2602
    • Blake, W.J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.