-
1
-
-
0009369386
-
Observation of the separation of spectral lines by an electric field
-
Stark J. (1913). Observation of the separation of spectral lines by an electric field. Nature 92(2301): 401
-
(1913)
Nature
, vol.92
, Issue.2301
, pp. 401
-
-
Stark, J.1
-
2
-
-
6344286862
-
Lanalogo elettrico del fenomeno diZeeman e la costituzione dellatomo
-
Lo Surdo A. (1914). Lanalogo elettrico del fenomeno diZeeman e la costituzione dellatomo. Leletrotecnica 1: 624-34
-
(1914)
Leletrotecnica
, vol.1
, pp. 624-634
-
-
Lo Surdo, A.1
-
3
-
-
6344230203
-
A simultaneous discovery: The case of Johannes Stark and Antonino Lo Surdo
-
Leone M, Paoletti A, Robotti N. (2004). A simultaneous discovery: the case of Johannes Stark and Antonino Lo Surdo. Phys. Perspect. 6: 271-94
-
(2004)
Phys. Perspect
, vol.6
, pp. 271-294
-
-
Leone, M.1
Paoletti, A.2
Robotti, N.3
-
4
-
-
36149022808
-
The Stark effect from the point of view of Schroedingers quantum theory
-
Epstein PS. (1926). The Stark effect from the point of view of Schroedingers quantum theory. Phys. Rev. 28: 695-710
-
(1926)
Phys. Rev
, vol.28
, pp. 695-710
-
-
Epstein, P.S.1
-
5
-
-
84981796364
-
Electrochromism and solvatochromism
-
Liptay W. (1969). Electrochromism and solvatochromism. Angew. Chem. Int. Ed. 8(3): 177-88
-
(1969)
Angew. Chem. Int. Ed
, vol.8
, Issue.3
, pp. 177-188
-
-
Liptay, W.1
-
6
-
-
33947087821
-
Electric field effects on oriented molecules and molecular crystals
-
Hochstrasser RM. (1973). Electric field effects on oriented molecules and molecular crystals. Acc. Chem. Res. 6: 263-69
-
(1973)
Acc. Chem. Res
, vol.6
, pp. 263-269
-
-
Hochstrasser, R.M.1
-
7
-
-
84858759425
-
Experimental and theoretical studies on the excited state polarizabilities of benzene, naphthalene and anthracene
-
Mathies R, Albrecht AC. (1974). Experimental and theoretical studies on the excited state polarizabilities of benzene, naphthalene and anthracene. J. Chem. Phys. 60: 2500-8
-
(1974)
J. Chem. Phys
, vol.60
, pp. 2500-2508
-
-
Mathies, R.1
Albrecht, A.C.2
-
8
-
-
0001718556
-
Retinal has a highly dipolar vertically excited singlet state: Implications for vision
-
Mathies R, Stryer L. (1976). Retinal has a highly dipolar vertically excited singlet state: implications for vision. PNAS 73(7): 2169-73
-
(1976)
PNAS
, vol.73
, Issue.7
, pp. 2169-2173
-
-
Mathies, R.1
Stryer, L.2
-
9
-
-
0000460141
-
Magnitude and direction of the change in dipole moment associated with excitation of the primary electron donor in Rhodopseudomonas sphaeroides reaction centers
-
Lockhart DJ, Boxer SG. (1987). Magnitude and direction of the change in dipole moment associated with excitation of the primary electron donor in Rhodopseudomonas sphaeroides reaction centers. Biochemistry 26: 664-68
-
(1987)
Biochemistry
, vol.26
, pp. 664-668
-
-
Lockhart, D.J.1
Boxer, S.G.2
-
10
-
-
0025758270
-
Large protein-induced dipoles for a symmetric carotenoid in a photosynthetic antenna complex
-
Gottfried DS, Steffen MA, Boxer SG. (1991). Large protein-induced dipoles for a symmetric carotenoid in a photosynthetic antenna complex. Science 251(4994): 662-65
-
(1991)
Science
, vol.251
, Issue.4994
, pp. 662-665
-
-
Gottfried, D.S.1
Steffen, M.A.2
Boxer, S.G.3
-
11
-
-
0004214524
-
-
London: Longmans Green
-
Haldane JBS. (1930). Enzymes. London: Longmans Green
-
(1930)
Enzymes
-
-
Haldane, J.B.S.1
-
12
-
-
84855649802
-
Catalytic proficiency: The extreme case of S-O cleaving sulfatases
-
Edwards DR, Lohman DC, Wolfenden R. (2012). Catalytic proficiency: the extreme case of S-O cleaving sulfatases. J. Am. Chem. Soc. 134: 525-31
-
(2012)
J. Am. Chem. Soc
, vol.134
, pp. 525-531
-
-
Edwards, D.R.1
Lohman, D.C.2
Wolfenden, R.3
-
13
-
-
0038286174
-
The rate of hydrolysis of phosphomonoester dianions and the exceptional catalytic proficiencies of protein and inositol phosphatases
-
Lad C, Williams N, Wolfenden R. (2003). The rate of hydrolysis of phosphomonoester dianions and the exceptional catalytic proficiencies of protein and inositol phosphatases. PNAS 100: 5607-10
-
(2003)
PNAS
, vol.100
, pp. 5607-5610
-
-
Lad, C.1
Williams, N.2
Wolfenden, R.3
-
14
-
-
0028918401
-
A proficient enzyme
-
Radzicka A, Wolfenden R. (1995). A proficient enzyme. Science 267(5194): 90-93
-
(1995)
Science
, vol.267
, Issue.5194
, pp. 90-93
-
-
Radzicka, A.1
Wolfenden, R.2
-
16
-
-
0346726109
-
How enzymes work: Analysis by modern rate theory and computer simulations
-
Garcia-Viloca M, Gao J, Karplus M, Truhlar DG. (2004). How enzymes work: analysis by modern rate theory and computer simulations. Science 303(5655): 186-95
-
(2004)
Science
, vol.303
, Issue.5655
, pp. 186-195
-
-
Garcia-Viloca, M.1
Gao, J.2
Karplus, M.3
Truhlar, D.G.4
-
17
-
-
0034656302
-
So do we understand how enzymes work?
-
Blow D. (2000). So do we understand how enzymes work? Structure 8(4): R77-81
-
(2000)
Structure
, vol.8
, Issue.4
, pp. R77-R81
-
-
Blow, D.1
-
18
-
-
0024298964
-
How do enzymes work?
-
Kraut J. (1988). How do enzymes work? Science 242: 533-40
-
(1988)
Science
, vol.242
, pp. 533-540
-
-
Kraut, J.1
-
19
-
-
33947547892
-
Molecular architecture and biological reactions
-
Pauling L. (1946). Molecular architecture and biological reactions. Chem. Eng. News 24(10): 1375-77
-
(1946)
Chem. Eng. News
, vol.24
, Issue.10
, pp. 1375-1377
-
-
Pauling, L.1
-
20
-
-
0013852463
-
Structure of hen egg-white lysozyme: A three-dimensional Fourier synthesis at 2Å resolution
-
Blake CCF, Koenig DF, Mair GA, North ACT, Phillips DC, Sarma VR. (1965). Structure of hen egg-white lysozyme: a three-dimensional Fourier synthesis at 2Å resolution. Nature 206: 757-61
-
(1965)
Nature
, vol.206
, pp. 757-761
-
-
Blake, C.C.F.1
Koenig, D.F.2
Mair, G.A.3
North, A.C.T.4
Phillips, D.C.5
Sarma, V.R.6
-
21
-
-
0002102170
-
On the nature of the binding of hexa-N-Acetyl glucosamine substrate to lysozyme
-
ed.ERBlout, FABovey, MGoodman, NLotan NewYork Wiley
-
Levitt M. (1974). On the nature of the binding of hexa-N-Acetyl glucosamine substrate to lysozyme. In Peptides, Polypeptides, and Proteins, ed.ERBlout, FABovey, MGoodman, NLotan, pp. 99-113.NewYork: Wiley
-
(1974)
Peptides, Polypeptides, and Proteins
, pp. 99-113
-
-
Levitt, M.1
-
22
-
-
0016624901
-
Binding energy, specificity, and enzymic catalysis: The Circe effect
-
Jencks WP. (1975). Binding energy, specificity, and enzymic catalysis: the Circe effect. Adv. Enzymol. Relat. Areas Mol. Biol. 43: 219-410
-
(1975)
Adv. Enzymol. Relat. Areas Mol. Biol
, vol.43
, pp. 219-410
-
-
Jencks, W.P.1
-
23
-
-
84875636822
-
Specificity in transition state binding: The Pauling model revisited
-
Amyes TL, Richard JP. (2013). Specificity in transition state binding: the Pauling model revisited. Biochemistry 52(12): 2021-35
-
(2013)
Biochemistry
, vol.52
, Issue.12
, pp. 2021-2035
-
-
Amyes, T.L.1
Richard, J.P.2
-
24
-
-
43649086695
-
Phosphate binding energy and catalysis by small and large molecules
-
Morrow JR, Amyes TL, Richard JP. (2008). Phosphate binding energy and catalysis by small and large molecules. Acc. Chem. Res. 41(4): 539-48
-
(2008)
Acc. Chem. Res
, vol.41
, Issue.4
, pp. 539-548
-
-
Morrow, J.R.1
Amyes, T.L.2
Richard, J.P.3
-
25
-
-
79955438648
-
OMP decarboxylase: Phosphodianion binding energy is used to stabilize a vinyl carbanion intermediate
-
Goryanova B, Amyes TL, Gerlt JA, Richard JP. (2011). OMP decarboxylase: phosphodianion binding energy is used to stabilize a vinyl carbanion intermediate. J. Am. Chem. Soc. 133: 6545-48
-
(2011)
J. Am. Chem. Soc
, vol.133
, pp. 6545-6548
-
-
Goryanova, B.1
Amyes, T.L.2
Gerlt, J.A.3
Richard, J.P.4
-
26
-
-
70149104037
-
Determining the catalytic role of remote substrate binding interactions in ketosteroid isomerase
-
Schwans JP, Kraut DA, Herschlag D. (2009). Determining the catalytic role of remote substrate binding interactions in ketosteroid isomerase. PNAS 106: 14271-75
-
(2009)
PNAS
, vol.106
, pp. 14271-14275
-
-
Schwans, J.P.1
Kraut, D.A.2
Herschlag, D.3
-
27
-
-
33947486528
-
Transition state characterization for catalyzed reactions
-
Kurz JL. (1963). Transition state characterization for catalyzed reactions. J. Am. Chem. Soc. 85: 987-91
-
(1963)
J. Am. Chem. Soc
, vol.85
, pp. 987-991
-
-
Kurz, J.L.1
-
28
-
-
0002903441
-
Analog approaches to the structure of the transition state in enzyme reactions
-
Wolfenden R. (1972). Analog approaches to the structure of the transition state in enzyme reactions. Acc. Chem. Res. 5: 10-18
-
(1972)
Acc. Chem. Res
, vol.5
, pp. 10-18
-
-
Wolfenden, R.1
-
29
-
-
0028040716
-
A low-barrier hydrogen bond in the catalytic triad of serine proteases
-
Frey P, Whitt S, Tobin J. (1994). A low-barrier hydrogen bond in the catalytic triad of serine proteases. Science 264(5167): 1927-30
-
(1994)
Science
, vol.264
, Issue.5167
, pp. 1927-1930
-
-
Frey, P.1
Whitt, S.2
Tobin, J.3
-
30
-
-
0032475836
-
The low barrier hydrogen bond in enzymatic catalysis
-
Cleland WW, Frey PA, Gerlt JA. (1998). The low barrier hydrogen bond in enzymatic catalysis. J. Biol. Chem. 273: 25529-32
-
(1998)
J. Biol. Chem
, vol.273
, pp. 25529-25532
-
-
Cleland, W.W.1
Frey, P.A.2
Gerlt, J.A.3
-
32
-
-
0015497445
-
Subtilisin Stereochemical mechanism involving transition-state stabilization
-
Robertus JD, Kraut J, Alden RA, Birktoft JJ. (1972). Subtilisin. Stereochemical mechanism involving transition-state stabilization. Biochemistry 11: 4293-303
-
(1972)
Biochemistry
, vol.11
, pp. 4293-4303
-
-
Robertus, J.D.1
Kraut, J.2
Alden, R.A.3
Birktoft, J.J.4
-
33
-
-
33748633480
-
Electrostatic basis for enzyme catalysis
-
Warshel A, Sharma PK, Kato M, Xiang Y, Liu H, Olsson MHM. (2006). Electrostatic basis for enzyme catalysis. Chem. Rev. 106: 3210-35
-
(2006)
Chem. Rev
, vol.106
, pp. 3210-3235
-
-
Warshel, A.1
Sharma, P.K.2
Kato, M.3
Xiang, Y.4
Liu, H.5
Olsson, M.H.M.6
-
34
-
-
77957753971
-
Enzyme catalysis from improved packing in their transition-state structures
-
Williams D. (2010). Enzyme catalysis from improved packing in their transition-state structures. Curr. Opin. Chem. Biol. 14: 666-70
-
(2010)
Curr. Opin. Chem. Biol
, vol.14
, pp. 666-670
-
-
Williams, D.1
-
35
-
-
13644271603
-
Positional ordering of reacting groups contributes significantly to the efficiency of proton transfer at an antibody active site
-
Seebeck FP, Hilvert D. (2005). Positional ordering of reacting groups contributes significantly to the efficiency of proton transfer at an antibody active site. J. Am. Chem. Soc. 127: 1307-12
-
(2005)
J. Am. Chem. Soc
, vol.127
, pp. 1307-1312
-
-
Seebeck, F.P.1
Hilvert, D.2
-
36
-
-
0030917908
-
Loss of translational entropy in binding, folding, and catalysis
-
Amzel LM. (1998). Loss of translational entropy in binding, folding, and catalysis. Proteins 28: 144-49
-
(1998)
Proteins
, vol.28
, pp. 144-149
-
-
Amzel, L.M.1
-
37
-
-
0015101706
-
Entropic contributions to rate accelerations in enzymic and intramolecular reactions and the chelate effect
-
Page M, Jencks W. (1971). Entropic contributions to rate accelerations in enzymic and intramolecular reactions and the chelate effect. PNAS 68: 1678-83
-
(1971)
PNAS
, vol.68
, pp. 1678-1683
-
-
Page, M.1
Jencks, W.2
-
38
-
-
85023100437
-
The effect of geminal substitution ring size and rotamer distribution on the intramolecular nucleophilic catalysis of the hydrolysis of monophenyl esters of dibasic acids and the solvolysis of the intermediate anhydrides
-
Bruice TC, Pandit UK. (1960). The effect of geminal substitution ring size and rotamer distribution on the intramolecular nucleophilic catalysis of the hydrolysis of monophenyl esters of dibasic acids and the solvolysis of the intermediate anhydrides. J. Am. Chem. Soc. 82: 5858-65
-
(1960)
J. Am. Chem. Soc
, vol.82
, pp. 5858-5865
-
-
Bruice, T.C.1
Pandit, U.K.2
-
39
-
-
0040362704
-
Chemical basis for enzyme catalysis
-
Bruice TC, Benkovic SJ. (2000). Chemical basis for enzyme catalysis. Biochemistry 39: 6267-74
-
(2000)
Biochemistry
, vol.39
, pp. 6267-6274
-
-
Bruice, T.C.1
Benkovic, S.J.2
-
40
-
-
0037433232
-
Enzymes do what is expected (chalcone isomerase versus chorismate mutase
-
Hur S, Bruice TC. (2003). Enzymes do what is expected (chalcone isomerase versus chorismate mutase). J. Am. Chem. Soc. 125: 1472-73
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 1472-1473
-
-
Hur, S.1
Bruice, T.C.2
-
43
-
-
0043141259
-
An empirical valence bond approach for comparing reactions in solutions and in enzymes
-
Warshel A, Weiss RM. (1980). An empirical valence bond approach for comparing reactions in solutions and in enzymes. J. Am. Chem. Soc. 102: 6218-26
-
(1980)
J. Am. Chem. Soc
, vol.102
, pp. 6218-6226
-
-
Warshel, A.1
Weiss, R.M.2
-
44
-
-
0000467270
-
Electrostatic basis of structure-function correlation in proteins
-
Warshel A. (1981). Electrostatic basis of structure-function correlation in proteins. Acc. Chem. Res. 14: 284-90
-
(1981)
Acc. Chem. Res
, vol.14
, pp. 284-290
-
-
Warshel, A.1
-
45
-
-
4644373998
-
Enzymatic mechanisms for catalysis of enolization: Ketosteroid isomerase
-
Pollack RM. (2004). Enzymatic mechanisms for catalysis of enolization: ketosteroid isomerase. Bioorg. Chem. 32: 341-53
-
(2004)
Bioorg. Chem
, vol.32
, pp. 341-353
-
-
Pollack, R.M.1
-
47
-
-
0343791148
-
Electric moments of molecules in liquids
-
Onsager L. (1936). Electric moments of molecules in liquids. J. Am. Chem. Soc. 58: 1486-93
-
(1936)
J. Am. Chem. Soc
, vol.58
, pp. 1486-1493
-
-
Onsager, L.1
-
48
-
-
0342394897
-
The dielectric polarization of polar liquids
-
Kirkwood JG. (1939). The dielectric polarization of polar liquids. J. Chem. Phys. 7: 911-19
-
(1939)
J. Chem. Phys
, vol.7
, pp. 911-919
-
-
Kirkwood, J.G.1
-
49
-
-
0001229288
-
Theory of the time development of the Stokes shift in polar media
-
Bagchi B, Oxtoby DW, Fleming GR. (1984). Theory of the time development of the Stokes shift in polar media. Chem. Phys. 86: 257-67
-
(1984)
Chem. Phys
, vol.86
, pp. 257-267
-
-
Bagchi, B.1
Oxtoby, D.W.2
Fleming, G.R.3
-
51
-
-
0542434939
-
Inorganic oxidation-reduction reactions in solution electron transfers
-
Zwolinski B, Marcus R, Eyring H. (1955). Inorganic oxidation-reduction reactions in solution electron transfers. Chem. Rev. 55: 157-80
-
(1955)
Chem. Rev
, vol.55
, pp. 157-180
-
-
Zwolinski, B.1
Marcus, R.2
Eyring, H.3
-
52
-
-
0010884753
-
On the theory of oxidation-reduction reactions involving electron transfer
-
Marcus R. (1956). On the theory of oxidation-reduction reactions involving electron transfer. J. Chem. Phys. 24: 966
-
(1956)
J. Chem. Phys
, vol.24
, pp. 966
-
-
Marcus, R.1
-
53
-
-
84928333221
-
Measuring electric fields and noncovalent interactions using the vibrational Stark effect
-
Fried SD, Boxer SG. (2015). Measuring electric fields and noncovalent interactions using the vibrational Stark effect. Acc. Chem. Res. 48: 998-1006
-
(2015)
Acc. Chem. Res
, vol.48
, pp. 998-1006
-
-
Fried, S.D.1
Boxer, S.G.2
-
54
-
-
84881071656
-
Measuring electrostatic fields in both hydrogen-bonding and nonhydrogen-bonding environments using carbonyl vibrational probes
-
Fried SD, Bagchi S, Boxer SG. (2013). Measuring electrostatic fields in both hydrogen-bonding and nonhydrogen-bonding environments using carbonyl vibrational probes. J. Am. Chem. Soc. 135: 11181-92
-
(2013)
J. Am. Chem. Soc
, vol.135
, pp. 11181-11192
-
-
Fried, S.D.1
Bagchi, S.2
Boxer, S.G.3
-
55
-
-
80055014555
-
Direct measurements of electric fields in weak OH p hydrogen bonds
-
Saggu M, Levinson NM, Boxer SG. (2011). Direct measurements of electric fields in weak OH p hydrogen bonds. J. Am. Chem. Soc. 133: 17414-19
-
(2011)
J. Am. Chem. Soc
, vol.133
, pp. 17414-17419
-
-
Saggu, M.1
Levinson, N.M.2
Boxer, S.G.3
-
57
-
-
37049142631
-
Substitution at saturated carbon Part XIV Solvent effects on the free energies of ions, ion-pairs, non-electrolytes, and transition states in some SN and SE reactions
-
Abraham MH. (1972). Substitution at saturated carbon. Part XIV. Solvent effects on the free energies of ions, ion-pairs, non-electrolytes, and transition states in some SN and SE reactions. J. Chem. Soc. Perkin Trans. 2 10: 1343-57
-
(1972)
J. Chem. Soc. Perkin Trans
, vol.2
, Issue.10
, pp. 1343-1357
-
-
Abraham, M.H.1
-
58
-
-
0000230329
-
Energetics of enzyme catalysis
-
Warshel A. (1978). Energetics of enzyme catalysis. PNAS 75: 5250-54
-
(1978)
PNAS
, vol.75
, pp. 5250-5254
-
-
Warshel, A.1
-
59
-
-
0017100947
-
Theoretical studies of enzymic reactions: Dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme
-
Warshel A, Levitt M. (1976). Theoretical studies of enzymic reactions: dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme. J. Mol. Biol. 103: 227-49
-
(1976)
J. Mol. Biol
, vol.103
, pp. 227-249
-
-
Warshel, A.1
Levitt, M.2
-
60
-
-
0019889036
-
Calculations of enzymic reactions: Calculations of pKa, proton transfer reactions, and general acid catalysis reactions in enzymes
-
Warshel A. (1981). Calculations of enzymic reactions: calculations of pKa, proton transfer reactions, and general acid catalysis reactions in enzymes. Biochemistry 20: 3167-77
-
(1981)
Biochemistry
, vol.20
, pp. 3167-3177
-
-
Warshel, A.1
-
61
-
-
0037207102
-
The catalytic power of ketosteroid isomerase investigated by computer simulation
-
Feierberg I, Aqvist J. (2002). The catalytic power of ketosteroid isomerase investigated by computer simulation. Biochemistry 41: 15728-35
-
(2002)
Biochemistry
, vol.41
, pp. 15728-15735
-
-
Feierberg, I.1
Aqvist, J.2
-
62
-
-
34547940340
-
Quantum chemical analysis of reaction paths in chorismate mutase: Conformational effects and electrostatic stabilization
-
Szefczyk B, Claeyssens F, Mulholland AJ, Sokalski WA. (2007). Quantum chemical analysis of reaction paths in chorismate mutase: conformational effects and electrostatic stabilization. Int. J. Quantum Chem. 107: 2274-85
-
(2007)
Int. J. Quantum Chem
, vol.107
, pp. 2274-2285
-
-
Szefczyk, B.1
Claeyssens, F.2
Mulholland, A.J.3
Sokalski, W.A.4
-
63
-
-
0023280069
-
Calculation of electrostatic potentials in an enzyme active site
-
Gilson M, Honig B. (1987). Calculation of electrostatic potentials in an enzyme active site. Nature 330: 84-86
-
(1987)
Nature
, vol.330
, pp. 84-86
-
-
Gilson, M.1
Honig, B.2
-
64
-
-
0024706282
-
Electrostatic fields in the active sites of lysozymes
-
Sun D, Liao D, Remington S. (1989). Electrostatic fields in the active sites of lysozymes. PNAS 86: 5361-65
-
(1989)
PNAS
, vol.86
, pp. 5361-5365
-
-
Sun, D.1
Liao, D.2
Remington, S.3
-
65
-
-
0040321024
-
Experimental measurement of the effective dielectric in the hydrophobic core of a protein
-
Garćia-Moreno B, Dwyer JJ, Gittis AG, Lattman EA, Spencer DS, Stites WE. (1997). Experimental measurement of the effective dielectric in the hydrophobic core of a protein. Biophys. Chem. 64: 211-24
-
(1997)
Biophys. Chem
, vol.64
, pp. 211-224
-
-
Garćia-Moreno, B.1
Dwyer, J.J.2
Gittis, A.G.3
Lattman, E.A.4
Spencer, D.S.5
Stites, W.E.6
-
66
-
-
0036001159
-
Structural basis of perturbed pKa values of catalytic groups in enzyme active sites
-
Harris TK, Turner GJ. (2002). Structural basis of perturbed pKa values of catalytic groups in enzyme active sites. IUBMB Life 53: 85-98
-
(2002)
IUBMB Life
, vol.53
, pp. 85-98
-
-
Harris, T.K.1
Turner, G.J.2
-
67
-
-
79955092337
-
Large shifts in pKa values of lysine residues buried inside a protein
-
Isom DG, Casta ñeda CA, Cannon BR, Garćia-Moreno B. (2011). Large shifts in pKa values of lysine residues buried inside a protein. PNAS 108: 5260-65
-
(2011)
PNAS
, vol.108
, pp. 5260-5265
-
-
Isom, D.G.1
Casta Ñeda, C.A.2
Cannon, B.R.3
Garćia-Moreno, B.4
-
68
-
-
0024594073
-
Electrostatic interactions in wild-Type and mutant recombinant human myoglobins
-
Varadarajan R, Lambright DG, Boxer SG. (1989). Electrostatic interactions in wild-Type and mutant recombinant human myoglobins. Biochemistry 28: 3771-81
-
(1989)
Biochemistry
, vol.28
, pp. 3771-3781
-
-
Varadarajan, R.1
Lambright, D.G.2
Boxer, S.G.3
-
69
-
-
0041972670
-
How cytochromes with different folds control heme redox potentials
-
Mao J, Hauser K, Gunner MR. (2003). How cytochromes with different folds control heme redox potentials. Biochemistry 42: 9829-40
-
(2003)
Biochemistry
, vol.42
, pp. 9829-9840
-
-
Mao, J.1
Hauser, K.2
Gunner, M.R.3
-
70
-
-
0024495355
-
Effects of buried ionizable amino acids on the reduction potential of recombinant myoglobin
-
Varadarajan R, Zewert TE, Gray HB, Boxer SG. (1989). Effects of buried ionizable amino acids on the reduction potential of recombinant myoglobin. Science 243: 69-72
-
(1989)
Science
, vol.243
, pp. 69-72
-
-
Varadarajan, R.1
Zewert, T.E.2
Gray, H.B.3
Boxer, S.G.4
-
71
-
-
33646262869
-
Testing electrostatic complementarity in enzyme catalysis: Hydrogen bonding in the ketosteroid isomerase oxyanion hole
-
Kraut DA, Sigala PA, Pybus B, Liu CW, Ringe D, et al. (2006). Testing electrostatic complementarity in enzyme catalysis: hydrogen bonding in the ketosteroid isomerase oxyanion hole. PLOS Biol. 4(4): e99
-
(2006)
PLOS Biol
, vol.4
, Issue.4
, pp. e99
-
-
Kraut, D.A.1
Sigala, P.A.2
Pybus, B.3
Liu, C.W.4
Ringe, D.5
-
72
-
-
0037204951
-
Probing protein electrostatics with a synthetic fluorescent amino acid
-
Cohen BE, McAnaney TB, Park ES, Jan YN, Boxer SG, Jan LY. (2002). Probing protein electrostatics with a synthetic fluorescent amino acid. Science 296: 1700-3
-
(2002)
Science
, vol.296
, pp. 1700-1703
-
-
Cohen, B.E.1
McAnaney, T.B.2
Park, E.S.3
Jan, Y.N.4
Boxer, S.G.5
Jan, L.Y.6
-
73
-
-
0035028745
-
Mechanisms of tryptophan fluorescence shifts in proteins
-
Vivian JT, Callis PR. (2001). Mechanisms of tryptophan fluorescence shifts in proteins. Biophys. J. 80: 2093-109
-
(2001)
Biophys. J
, vol.80
, pp. 2093-2109
-
-
Vivian, J.T.1
Callis, P.R.2
-
74
-
-
0001465616
-
Chemical shifts in proteins: A shielding trajectory analysis of the fluorine nuclear magnetic resonance spectrum of the Escherichia coli galactose binding protein
-
Pearson J, Oldfield E, Lee F, Warshel A. (1993). Chemical shifts in proteins: a shielding trajectory analysis of the fluorine nuclear magnetic resonance spectrum of the Escherichia coli galactose binding protein. J. Am. Chem. Soc. 115: 6851-62
-
(1993)
J. Am. Chem. Soc
, vol.115
, pp. 6851-6862
-
-
Pearson, J.1
Oldfield, E.2
Lee, F.3
Warshel, A.4
-
75
-
-
0009423608
-
Correlation of fluorine-19 chemical shielding and chemical shift nonequivalence
-
Augspurger J, Dykstra C. (1993). Correlation of fluorine-19 chemical shielding and chemical shift nonequivalence. J. Am. Chem. Soc. 115: 12016-19
-
(1993)
J. Am. Chem. Soc
, vol.115
, pp. 12016-12019
-
-
Augspurger, J.1
Dykstra, C.2
-
76
-
-
0000435803
-
Correlation of carbon-13 and oxygen-17 chemical shifts and the vibrational frequency of electrically perturbed carbon monoxide
-
Augspurger J, Dykstra C, Oldfield E. (1991). Correlation of carbon-13 and oxygen-17 chemical shifts and the vibrational frequency of electrically perturbed carbon monoxide. J. Am. Chem. Soc. 113: 2447-51
-
(1991)
J. Am. Chem. Soc
, vol.113
, pp. 2447-2451
-
-
Augspurger, J.1
Dykstra, C.2
Oldfield, E.3
-
77
-
-
0000103150
-
Chemical shifts in the NMR spectra of molecules containing polar groups
-
Buckingham AD. (1960). Chemical shifts in the NMR spectra of molecules containing polar groups. Can. J. Chem. 38: 300-7
-
(1960)
Can. J. Chem
, vol.38
, pp. 300-307
-
-
Buckingham, A.D.1
-
78
-
-
80051673221
-
SHIFTX2: Significantly improved protein chemical shift prediction
-
Han B, Liu Y, Ginzinger SW, Wishart DS. (2011). SHIFTX2: significantly improved protein chemical shift prediction. J. Biomol. NMR 50: 43-57
-
(2011)
J. Biomol. NMR
, vol.50
, pp. 43-57
-
-
Han, B.1
Liu, Y.2
Ginzinger, S.W.3
Wishart, D.S.4
-
79
-
-
80054955089
-
Site-specific spectroscopic reporters of the local electric field, hydration, structure, and dynamics of biomolecules
-
Waegele MM, Culik RM, Gai F. (2011). Site-specific spectroscopic reporters of the local electric field, hydration, structure, and dynamics of biomolecules. J. Phys. Chem. Lett. 2: 2598-609
-
(2011)
J. Phys. Chem. Lett
, vol.2
, pp. 2598-2609
-
-
Waegele, M.M.1
Culik, R.M.2
Gai, F.3
-
80
-
-
84881082892
-
Infrared probes for studying the structure and dynamics of biomolecules
-
Kim H, Cho M. (2013). Infrared probes for studying the structure and dynamics of biomolecules. Chem. Rev. 113: 5817-47
-
(2013)
Chem. Rev
, vol.113
, pp. 5817-5847
-
-
Kim, H.1
Cho, M.2
-
81
-
-
84857125236
-
Quantitative, directional measurement of electric field heterogeneity in the active site of ketosteroid isomerase
-
Fafarman AT, Sigala PA, Schwans JP, Fenn TD, Herschlag D, Boxer SG. (2012). Quantitative, directional measurement of electric field heterogeneity in the active site of ketosteroid isomerase. PNAS 109(6): E299-308
-
(2012)
PNAS
, vol.109
, Issue.6
, pp. E299-E308
-
-
Fafarman, A.T.1
Sigala, P.A.2
Schwans, J.P.3
Fenn, T.D.4
Herschlag, D.5
Boxer, S.G.6
-
82
-
-
0034499168
-
Vibrational Stark effects of nitriles i Methods and experimental results
-
Andrews SS, Boxer SG. (2000). Vibrational Stark effects of nitriles I. Methods and experimental results. J. Phys. Chem. A 104: 11853-63
-
(2000)
J. Phys. Chem
, vol.A104
, pp. 11853-11863
-
-
Andrews, S.S.1
Boxer, S.G.2
-
83
-
-
0001300576
-
Vibrational Stark effect spectroscopy
-
Chattopadhyay A, Boxer SG. (1995). Vibrational Stark effect spectroscopy. J. Am. Chem. Soc. 117: 1449-50
-
(1995)
J. Am. Chem. Soc
, vol.117
, pp. 1449-1450
-
-
Chattopadhyay, A.1
Boxer, S.G.2
-
84
-
-
0030624708
-
Stark spectroscopy: Applications in chemistry, biology, and materials science
-
Bublitz GU, Boxer SG. (1997). Stark spectroscopy: applications in chemistry, biology, and materials science. Annu. Rev. Phys. Chem. 48: 213-42
-
(1997)
Annu. Rev. Phys. Chem
, vol.48
, pp. 213-242
-
-
Bublitz, G.U.1
Boxer, S.G.2
-
85
-
-
65249172623
-
Stark realities
-
Boxer SG. (2009). Stark realities. J. Phys. Chem. B. 113: 2972-83
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 2972-2983
-
-
Boxer, S.G.1
-
87
-
-
0037030845
-
Origins of the sensitivity of molecular vibrations to electric fields: Carbonyl and nitrosyl stretches in model compounds and proteins
-
New York: Springer. 3rd ed. 87. Park ES, Boxer SG. (2002). Origins of the sensitivity of molecular vibrations to electric fields: carbonyl and nitrosyl stretches in model compounds and proteins. J. Phys. Chem. B 106: 5800-6
-
(2002)
J. Phys. Chem. B
, vol.106
, pp. 5800-5806
-
-
Park, E.S.1
Boxer, S.G.2
-
88
-
-
0001257322
-
Vibrational Stark spectroscopy in proteins: A probe and calibration for electrostatic fields
-
Park ES, Andrews SS, Hu RB, Boxer SG. (1999). Vibrational Stark spectroscopy in proteins: a probe and calibration for electrostatic fields. J. Phys. Chem. B. 103: 9813-17
-
(1999)
J. Phys. Chem. B
, vol.103
, pp. 9813-9817
-
-
Park, E.S.1
Andrews, S.S.2
Hu, R.B.3
Boxer, S.G.4
-
89
-
-
33746017658
-
Electric fields at the active site of an enzyme: Direct comparison of experiment with theory
-
Suydam IT, Snow CD, Pande VS, Boxer SG. (2006). Electric fields at the active site of an enzyme: direct comparison of experiment with theory. Science 313: 200-4
-
(2006)
Science
, vol.313
, pp. 200-204
-
-
Suydam, I.T.1
Snow, C.D.2
Pande, V.S.3
Boxer, S.G.4
-
90
-
-
84863492163
-
A solvatochromic model calibrates nitriles vibrational frequencies to electrostatic fields
-
Bagchi S, Fried SD, Boxer SG. (2012). A solvatochromic model calibrates nitriles vibrational frequencies to electrostatic fields. J. Am. Chem. Soc. 134: 10373-76
-
(2012)
J. Am. Chem. Soc
, vol.134
, pp. 10373-10376
-
-
Bagchi, S.1
Fried, S.D.2
Boxer, S.G.3
-
91
-
-
85018243435
-
Solvent-independent anharmonicity for carbonyl oscillators
-
Schneider SH, Kratocvhil HT, Zanni MT, Boxer SG. (2017). Solvent-independent anharmonicity for carbonyl oscillators. J. Phys. Chem. B 121(10): 2331
-
(2017)
J. Phys. Chem. B
, vol.121
, Issue.10
, pp. 2331
-
-
Schneider, S.H.1
Kratocvhil, H.T.2
Zanni, M.T.3
Boxer, S.G.4
-
92
-
-
77958474269
-
Nitrile bonds as infrared probes of electrostatics in ribonuclease S
-
Fafarman AT, Boxer SG. (2010). Nitrile bonds as infrared probes of electrostatics in ribonuclease S. J. Phys. Chem. B 114: 13536-44
-
(2010)
J. Phys. Chem
, vol.B114
, pp. 13536-13544
-
-
Fafarman, A.T.1
Boxer, S.G.2
-
93
-
-
79952751750
-
Dynamics of the folded and unfolded villin headpiece (HP35) measured with ultrafast 2D IR vibrational echo spectroscopy
-
Chung JK, Thielges MC, Fayer MD. (2011). Dynamics of the folded and unfolded villin headpiece (HP35) measured with ultrafast 2D IR vibrational echo spectroscopy. PNAS 108: 3578-83
-
(2011)
PNAS
, vol.108
, pp. 3578-3583
-
-
Chung, J.K.1
Thielges, M.C.2
Fayer, M.D.3
-
94
-
-
84904878087
-
Probing the electrostatics of active site microenvironments along the catalytic cycle for Escherichia coli dihydrofolate reductase
-
Liu CT, Layfield JP, Stewart RJ III, French JB, Hanoian P, et al. (2014). Probing the electrostatics of active site microenvironments along the catalytic cycle for Escherichia coli dihydrofolate reductase. J. Am. Chem. Soc. 136: 10349-60
-
(2014)
J. Am. Chem. Soc
, vol.136
, pp. 10349-10360
-
-
Liu, C.T.1
Layfield, J.P.2
Stewart, R.J.3
French, J.B.4
Hanoian, P.5
-
95
-
-
70349303948
-
Nitrile groups as vibrational probes of biomolecular structure and dynamics: An overview
-
Lindquist BA, Furse KE, Corcelli SA. (2009). Nitrile groups as vibrational probes of biomolecular structure and dynamics: an overview. Phys. Chem. Chem. Phys. 11: 8119-32
-
(2009)
Phys. Chem. Chem. Phys
, vol.11
, pp. 8119-8132
-
-
Lindquist, B.A.1
Furse, K.E.2
Corcelli, S.A.3
-
96
-
-
33750471951
-
A genetically encoded infrared probe
-
Schultz KC, Supekova L, Ryu Y, Xie J, Perera R, Schultz PG. (2006). A genetically encoded infrared probe. J. Am. Chem. Soc. 128: 13984-85
-
(2006)
J. Am. Chem. Soc
, vol.128
, pp. 13984-13985
-
-
Schultz, K.C.1
Supekova, L.2
Ryu, Y.3
Xie, J.4
Perera, R.5
Schultz, P.G.6
-
97
-
-
84897114242
-
A conserved water-mediated hydrogen bond network defines bosutinibs kinase selectivity
-
Levinson NM, Boxer SG. (2013). A conserved water-mediated hydrogen bond network defines bosutinibs kinase selectivity. Nat. Chem. Biol. 10: 127-32
-
(2013)
Nat. Chem. Biol
, vol.10
, pp. 127-132
-
-
Levinson, N.M.1
Boxer, S.G.2
-
98
-
-
79961229861
-
Direct measurement of the membrane dipole field in bicelles using vibrational Stark effect spectroscopy
-
Hu W, Webb LJ. (2011). Direct measurement of the membrane dipole field in bicelles using vibrational Stark effect spectroscopy. J. Phys. Chem. Lett. 2: 1925-30
-
(2011)
J. Phys. Chem. Lett
, vol.2
, pp. 1925-1930
-
-
Hu, W.1
Webb, L.J.2
-
99
-
-
70349273994
-
Probing hydrogen bonding environments: Solvatochromic effects on the CN vibration of benzonitrile
-
Aschaffenburg D, Moog R. (2009). Probing hydrogen bonding environments: solvatochromic effects on the CN vibration of benzonitrile. J. Phys. Chem. B 113: 12736-43
-
(2009)
J. Phys. Chem
, vol.B113
, pp. 12736-12743
-
-
Aschaffenburg, D.1
Moog, R.2
-
100
-
-
77956634583
-
Decomposition of vibrational shifts of nitriles into electrostatic and hydrogen-bonding effects
-
Fafarman A, Sigala P, Herschlag D, Boxer S. (2010). Decomposition of vibrational shifts of nitriles into electrostatic and hydrogen-bonding effects. J. Am. Chem. Soc. 132: 12811-13
-
(2010)
J. Am. Chem. Soc
, vol.132
, pp. 12811-12813
-
-
Fafarman, A.1
Sigala, P.2
Herschlag, D.3
Boxer, S.4
-
101
-
-
84969504494
-
Correlating nitrile IR frequencies to local electrostatics quantifies noncovalent interactions of peptides and proteins
-
Deb P, Haldar T, Kashid SM, Banerjee S, Chakrabarty S, Bagchi S. (2016). Correlating nitrile IR frequencies to local electrostatics quantifies noncovalent interactions of peptides and proteins. J. Phys. Chem. B 120: 4034-46
-
(2016)
J. Phys. Chem
, vol.B120
, pp. 4034-4046
-
-
Deb, P.1
Haldar, T.2
Kashid, S.M.3
Banerjee, S.4
Chakrabarty, S.5
Bagchi, S.6
-
102
-
-
79955398126
-
Vibrational solvatochromism and electrochromism of infrared probe molecules containing C=O, C=N, C==O, or C-F vibrational chromophore
-
Choi J-H, Cho M. (2011). Vibrational solvatochromism and electrochromism of infrared probe molecules containing C=O, C=N, C==O, or C-F vibrational chromophore. J. Chem. Phys. 134: 154513
-
(2011)
J. Chem. Phys
, vol.134
, pp. 154513
-
-
Choi, J.-H.1
Cho, M.2
-
103
-
-
0019316936
-
Direct observation of substrate distortion by triosephosphate isomerase using Fourier transform infrared spectroscopy
-
Belasco JG, Knowles JR. (1980). Direct observation of substrate distortion by triosephosphate isomerase using Fourier transform infrared spectroscopy. Biochemistry 19(3): 472-77
-
(1980)
Biochemistry
, vol.19
, Issue.3
, pp. 472-477
-
-
Belasco, J.G.1
Knowles, J.R.2
-
104
-
-
9744257006
-
Quantifying energetic contributions to ground state destabilization
-
Anderson VE. (2005). Quantifying energetic contributions to ground state destabilization. Arch. Biochem. Biophys. 433: 27-33
-
(2005)
Arch. Biochem. Biophys
, vol.433
, pp. 27-33
-
-
Anderson, V.E.1
-
105
-
-
33748632360
-
Spectroscopic characterization of distortion in enzyme complexes
-
Carey PR. (2006). Spectroscopic characterization of distortion in enzyme complexes. Chem. Rev. 106: 3043-54
-
(2006)
Chem. Rev
, vol.106
, pp. 3043-3054
-
-
Carey, P.R.1
-
106
-
-
0026788194
-
Forces, bond lengths, and reactivity: Fundamental insight into themechanism of enzyme catalysis
-
Tonge PJ, Carey PR. (1992). Forces, bond lengths, and reactivity: fundamental insight into themechanism of enzyme catalysis. Biochemistry 31: 9122-25
-
(1992)
Biochemistry
, vol.31
, pp. 9122-9125
-
-
Tonge, P.J.1
Carey, P.R.2
-
107
-
-
84922796655
-
Direct evidence of catalytic heterogeneity in lactate dehydrogenase by temperature jump infrared spectroscopy
-
Reddish MJ, Peng H-L, Deng H, Panwar KS, Callener R, Dyer RB. (2014). Direct evidence of catalytic heterogeneity in lactate dehydrogenase by temperature jump infrared spectroscopy. J. Phys. Chem. B 118: 10854-62
-
(2014)
J. Phys. Chem
, vol.B118
, pp. 10854-10862
-
-
Reddish, M.J.1
Peng, H.-L.2
Deng, H.3
Panwar, K.S.4
Callener, R.5
Dyer, R.B.6
-
108
-
-
84987897228
-
Vibrational Stark effects of carbonyl probes applied to re-interpret IR and Raman data for enzyme inhibitors in terms of electric fields at the active site
-
Schneider SH, Boxer SG. (2016). Vibrational Stark effects of carbonyl probes applied to re-interpret IR and Raman data for enzyme inhibitors in terms of electric fields at the active site. J. Phys. Chem. B 120: 9672-84
-
(2016)
J. Phys. Chem
, vol.B120
, pp. 9672-9684
-
-
Schneider, S.H.1
Boxer, S.G.2
-
109
-
-
84978732960
-
Conformational heterogeneity in the Michaelis complex of lactate dehydrogenase: An analysis of vibrational spectroscopy usingMarkov and hiddenMarkov models
-
Pan X, Schwartz SD. (2016). Conformational heterogeneity in the Michaelis complex of lactate dehydrogenase: an analysis of vibrational spectroscopy usingMarkov and hiddenMarkov models. J. Phys. Chem. B 120: 6612-20
-
(2016)
J. Phys. Chem
, vol.B120
, pp. 6612-6620
-
-
Pan, X.1
Schwartz, S.D.2
-
110
-
-
50449136029
-
Enzymic isomerization of 5-3-ketosteroids
-
Talalay P, Wang VS. (1955). Enzymic isomerization of 5-3-ketosteroids. Biochim. Biophys. Acta 18: 300-1
-
(1955)
Biochim. Biophys. Acta
, vol.18
, pp. 300-301
-
-
Talalay, P.1
Wang, V.S.2
-
111
-
-
0001078277
-
Oxidative degradation of testosterone by adaptive enzymes
-
Talalay P, Dobson MM, Tapley DF. (1952). Oxidative degradation of testosterone by adaptive enzymes. Nature 170: 620-21
-
(1952)
Nature
, vol.170
, pp. 620-621
-
-
Talalay, P.1
Dobson, M.M.2
Tapley, D.F.3
-
112
-
-
0001138955
-
The mechanism of the5-3-ketosteroid isomerase reaction: Absorption and fluorescence spectra of enzyme-steroid complexes
-
Wang S, Kawahara F, Talalay P. (1963). The mechanism of the5-3-ketosteroid isomerase reaction: absorption and fluorescence spectra of enzyme-steroid complexes. J. Biol. Chem. 238: 576-85
-
(1963)
J. Biol. Chem
, vol.238
, pp. 576-585
-
-
Wang, S.1
Kawahara, F.2
Talalay, P.3
-
113
-
-
0026598557
-
Nature of the intermediate in the 3-oxo-5-steroid isomerase reaction
-
Zeng B, Bounds P, Steiner R, Pollack R. (1992). Nature of the intermediate in the 3-oxo-5-steroid isomerase reaction. Biochemistry 31: 1521-28
-
(1992)
Biochemistry
, vol.31
, pp. 1521-1528
-
-
Zeng, B.1
Bounds, P.2
Steiner, R.3
Pollack, R.4
-
114
-
-
0024585879
-
Kinetic and ultraviolet spectroscopic studies of active-site mutants of5-3-ketosteroid isomerase
-
Kuliopulos A, Mildvan A, Shortle D, Talalay P. (1989). Kinetic and ultraviolet spectroscopic studies of active-site mutants of5-3-ketosteroid isomerase. Biochemistry 28: 149-59
-
(1989)
Biochemistry
, vol.28
, pp. 149-159
-
-
Kuliopulos, A.1
Mildvan, A.2
Shortle, D.3
Talalay, P.4
-
115
-
-
0025912705
-
Microscopic rate constants for the acetate ion catalyzed isomerization of 5-Androstene-3, 17-dione to 4-Androstene-3, 17-dione: A model for steroid isomerase
-
Zeng B, Pollack RM. (1991). Microscopic rate constants for the acetate ion catalyzed isomerization of 5-Androstene-3, 17-dione to 4-Androstene-3, 17-dione: a model for steroid isomerase. J. Am. Chem. Soc. 113: 3838-42
-
(1991)
J. Am. Chem. Soc
, vol.113
, pp. 3838-3842
-
-
Zeng, B.1
Pollack, R.M.2
-
116
-
-
84981516779
-
Evaluation of the catalytic contribution of a positioned general base in ketosteroid isomerase
-
Lamba V, Yabukarski F, Pinney M, Herschlag D. (2016). Evaluation of the catalytic contribution of a positioned general base in ketosteroid isomerase. J. Am. Chem. Soc. 138: 9902-9
-
(2016)
J. Am. Chem. Soc
, vol.138
, pp. 9902-9909
-
-
Lamba, V.1
Yabukarski, F.2
Pinney, M.3
Herschlag, D.4
-
117
-
-
84899463140
-
Experimental and computational mutagenesis to investigate the positioning of a general base within an enzyme active site
-
Schwans JP, Hanoian P, Lengerich BJ, Sunden F, Gonzalez A, et al. (2014). Experimental and computational mutagenesis to investigate the positioning of a general base within an enzyme active site. Biochemistry 53(15): 2541-55
-
(2014)
Biochemistry
, vol.53
, Issue.15
, pp. 2541-2555
-
-
Schwans, J.P.1
Hanoian, P.2
Lengerich, B.J.3
Sunden, F.4
Gonzalez, A.5
-
118
-
-
84919430407
-
Extreme electric fields power catalysis in the active site of ketosteroid isomerase
-
Fried SD, Bagchi S, Boxer SG. (2014). Extreme electric fields power catalysis in the active site of ketosteroid isomerase. Science 346: 1510-14
-
(2014)
Science
, vol.346
, pp. 1510-1514
-
-
Fried, S.D.1
Bagchi, S.2
Boxer, S.G.3
-
119
-
-
84987811206
-
A critical test of the electrostatic contribution to catalysis with non-canonical amino acids in ketosteroid isomerase
-
Wu Y, Boxer SG. (2016). A critical test of the electrostatic contribution to catalysis with non-canonical amino acids in ketosteroid isomerase. J. Am. Chem. Soc. 138: 11890-95
-
(2016)
J. Am. Chem. Soc
, vol.138
, pp. 11890-11895
-
-
Wu, Y.1
Boxer, S.G.2
-
120
-
-
84901705960
-
Using unnatural amino acids to probe the energetics of oxyanion hole hydrogen bonds in the ketosteroid isomerase active site
-
Natarajan A, Schwans JP, Herschlag D. (2014). Using unnatural amino acids to probe the energetics of oxyanion hole hydrogen bonds in the ketosteroid isomerase active site. J. Am. Chem. Soc. 136: 7643-54
-
(2014)
J. Am. Chem. Soc
, vol.136
, pp. 7643-7654
-
-
Natarajan, A.1
Schwans, J.P.2
Herschlag, D.3
-
121
-
-
0036882394
-
Serine protease mechanism and specificity
-
Hedstrom L. (2002). Serine protease mechanism and specificity. Chem. Rev. 102: 4501-24
-
(2002)
Chem. Rev
, vol.102
, pp. 4501-4524
-
-
Hedstrom, L.1
-
122
-
-
0025005004
-
Mechanistic studies of peptide prolyl cis-Trans isomerase: Evidence for catalysis by distortion
-
Harrison RK, Stein RL. (1990). Mechanistic studies of peptide prolyl cis-Trans isomerase: evidence for catalysis by distortion. Biochemistry 29: 1684-89
-
(1990)
Biochemistry
, vol.29
, pp. 1684-1689
-
-
Harrison, R.K.1
Stein, R.L.2
-
123
-
-
0027742843
-
A mechanism for rotamase catalysis by the FK506 binding protein
-
Fischer S, Michnick S, Karplus M. (1993). A mechanism for rotamase catalysis by the FK506 binding protein. Biochemistry 32: 13830-37
-
(1993)
Biochemistry
, vol.32
, pp. 13830-13837
-
-
Fischer, S.1
Michnick, S.2
Karplus, M.3
-
124
-
-
84904329758
-
Cyclophilin A catalyzes proline isomerization by an electrostatic handle mechanism
-
Camilloni C, Sahakyan AB, Holliday MJ, Isern NG, Zhang F, et al. (2014). Cyclophilin A catalyzes proline isomerization by an electrostatic handle mechanism. PNAS 111: 10203-8
-
(2014)
PNAS
, vol.111
, pp. 10203-10208
-
-
Camilloni, C.1
Sahakyan, A.B.2
Holliday, M.J.3
Isern, N.G.4
Zhang, F.5
-
125
-
-
0029639694
-
Exploration of possible mechanisms for 4-chlorobenzoyl CoA dehalogenase: Evidence for an aryl-enzyme intermediate
-
Crooks GP, Xu L, Barkley RM, Copley SD. (1995). Exploration of possible mechanisms for 4-chlorobenzoyl CoA dehalogenase: evidence for an aryl-enzyme intermediate. J. Am. Chem. Soc. 117: 10791
-
(1995)
J. Am. Chem. Soc
, vol.117
, pp. 10791
-
-
Crooks, G.P.1
Xu, L.2
Barkley, R.M.3
Copley, S.D.4
-
126
-
-
0030921325
-
On the dehalogenation mechanism of 4-chlorobenzyl CoA by 4-chlorobenzyl CoA dehalogenase
-
Zheng Y-J, Bruice TC. (1997). On the dehalogenation mechanism of 4-chlorobenzyl CoA by 4-chlorobenzyl CoA dehalogenase. J. Am. Chem. Soc. 119: 3868-77
-
(1997)
J. Am. Chem. Soc
, vol.119
, pp. 3868-3877
-
-
Zheng, Y.-J.1
Bruice, T.C.2
-
127
-
-
30144432502
-
Contributions of long-range electrostatic interactions to 4-chlorobenzoyl-CoA dehalogenase catalysis: A combined theoretical and experimental study
-
Wu J, Xu D, Lu X, Wang C, Guo H, Dunaway-Mariano D. (2006). Contributions of long-range electrostatic interactions to 4-chlorobenzoyl-CoA dehalogenase catalysis: a combined theoretical and experimental study. Biochemistry 45: 102-12
-
(2006)
Biochemistry
, vol.45
, pp. 102-112
-
-
Wu, J.1
Xu, D.2
Lu, X.3
Wang, C.4
Guo, H.5
Dunaway-Mariano, D.6
-
128
-
-
0000707160
-
An investigation into the minimum requirements for peptide hydrolysis by mutation of the catalytic triad of trypsin
-
Corey DR, Craik CS. (1992). An investigation into the minimum requirements for peptide hydrolysis by mutation of the catalytic triad of trypsin. J. Am. Chem. Soc. 114: 1784-90
-
(1992)
J. Am. Chem. Soc
, vol.114
, pp. 1784-1790
-
-
Corey, D.R.1
Craik, C.S.2
-
129
-
-
0014689979
-
Role of a buried acid group in the mechanism of action of chymotrypsin
-
Blow DM, Birktoft JJ, Hartley BS. (1969). Role of a buried acid group in the mechanism of action of chymotrypsin. Nature 221: 337-40
-
(1969)
Nature
, vol.221
, pp. 337-340
-
-
Blow, D.M.1
Birktoft, J.J.2
Hartley, B.S.3
-
130
-
-
0014945734
-
Structure of crystalline α-chymotrypsin: IV the structure of indoleacryloyl-α-chymotrypsin and its relevance to the hydrolytic mechanism of the enzyme
-
Henderson R. (1970). Structure of crystalline α-chymotrypsin: IV. The structure of indoleacryloyl-α-chymotrypsin and its relevance to the hydrolytic mechanism of the enzyme. J. Mol. Biol. 54: 341-54
-
(1970)
J. Mol. Biol
, vol.54
, pp. 341-354
-
-
Henderson, R.1
-
132
-
-
0034102419
-
Electrostatic stress in catalysis: Structure and mechanism of the enzyme orotidine monophosphate decarboxylase
-
Wu N, Mo Y, Gao J, Pai EF. (2000). Electrostatic stress in catalysis: structure and mechanism of the enzyme orotidine monophosphate decarboxylase. PNAS 97: 2017-22
-
(2000)
PNAS
, vol.97
, pp. 2017-2022
-
-
Wu, N.1
Mo, Y.2
Gao, J.3
Pai, E.F.4
-
133
-
-
0034705337
-
A revised mechanism for the alkaline phosphatase reaction involving three metal ions
-
Stec B, Holtz KM, Kantrowitz ER. (2000). A revised mechanism for the alkaline phosphatase reaction involving three metal ions. J. Mol. Biol. 299: 1303-11
-
(2000)
J. Mol. Biol
, vol.299
, pp. 1303-1311
-
-
Stec, B.1
Holtz, K.M.2
Kantrowitz, E.R.3
-
134
-
-
84908499924
-
Probing the origins of catalytic discrimination between phosphate and sulfate monoester hydrolysis: Comparative analysis of alkaline phosphatase and protein tyrosine phosphatases
-
Andrews LD, Zalatan JG, Herschlag D. (2014). Probing the origins of catalytic discrimination between phosphate and sulfate monoester hydrolysis: comparative analysis of alkaline phosphatase and protein tyrosine phosphatases. Biochemistry 53: 6811-19
-
(2014)
Biochemistry
, vol.53
, pp. 6811-6819
-
-
Andrews, L.D.1
Zalatan, J.G.2
Herschlag, D.3
-
135
-
-
33748585807
-
Pericyclic reactions in biological systems-Does nature know about the Diels-Alder reaction?
-
Laschat S. (1996). Pericyclic reactions in biological systems-Does nature know about the Diels-Alder reaction? Angew. Chem. Int. Ed. 35: 289-91
-
(1996)
Angew. Chem. Int. Ed
, vol.35
, pp. 289-291
-
-
Laschat, S.1
-
136
-
-
84962109823
-
Dynamically complex [6+4] and [4+2] cycloadditions in the biosynthesis of spinosyn A
-
Patel A, Chen Z, Yang Z, Gutíerrez O, Liu H-w, et al. (2016). Dynamically complex [6+4] and [4+2] cycloadditions in the biosynthesis of spinosyn A. J. Am. Chem. Soc. 138: 3631-34
-
(2016)
J. Am. Chem. Soc
, vol.138
, pp. 3631-3634
-
-
Patel, A.1
Chen, Z.2
Yang, Z.3
Gutíerrez, O.4
Liu, H.-W.5
-
138
-
-
77954811495
-
Computational design of an enzyme catalyst for a stereoselective bimolecular Diels-Alder reaction
-
Siegel JB, Zanghellini A, Lovick HM, Kiss G, Lambert AR, et al. (2010). Computational design of an enzyme catalyst for a stereoselective bimolecular Diels-Alder reaction. Science 329: 309-13
-
(2010)
Science
, vol.329
, pp. 309-313
-
-
Siegel, J.B.1
Zanghellini, A.2
Lovick, H.M.3
Kiss, G.4
Lambert, A.R.5
-
139
-
-
67549086082
-
Understanding the functional roles of amino acid residues in enzyme catalysis
-
Holliday GL, Mitchell JBO, Thornton JM. (2009). Understanding the functional roles of amino acid residues in enzyme catalysis. J. Mol. Biol. 390: 560-77
-
(2009)
J. Mol. Biol
, vol.390
, pp. 560-577
-
-
Holliday, G.L.1
Mitchell, J.B.O.2
Thornton, J.M.3
-
140
-
-
80053616941
-
Characterizing the complexity of enzymes on the basis of their mechanisms and structures with a bio-computational analysis
-
Holliday GL, Fischer JD, Mitchell JBO, Thornton JM. (2011). Characterizing the complexity of enzymes on the basis of their mechanisms and structures with a bio-computational analysis. FEBS J. 278: 3835-45
-
(2011)
FEBS J
, vol.278
, pp. 3835-3845
-
-
Holliday, G.L.1
Fischer, J.D.2
Mitchell, J.B.O.3
Thornton, J.M.4
-
141
-
-
68549113108
-
Metal-MACiE: A database of metals involved in biological catalysis
-
Andreini C, Bertini I, Cavallaro G, Holliday GL, Thornton JM. (2009). Metal-MACiE: a database of metals involved in biological catalysis. Bioinformatics 25: 2088-89
-
(2009)
Bioinformatics
, vol.25
, pp. 2088-2089
-
-
Andreini, C.1
Bertini, I.2
Cavallaro, G.3
Holliday, G.L.4
Thornton, J.M.5
-
143
-
-
77953623874
-
Enzyme promiscuity: A mechanistic and evolutionary perspective
-
Khersonsky O, Tawfik DS. (2010). Enzyme promiscuity: a mechanistic and evolutionary perspective. Annu. Rev. Biochem. 79: 471-505
-
(2010)
Annu. Rev. Biochem
, vol.79
, pp. 471-505
-
-
Khersonsky, O.1
Tawfik, D.S.2
-
144
-
-
57049143713
-
Promiscuous sulfatase activity and thio-effects in a phosphodiesterase of the alkaline phosphatase superfamily
-
Lassila JK, Herschlag D. (2008). Promiscuous sulfatase activity and thio-effects in a phosphodiesterase of the alkaline phosphatase superfamily. Biochemistry 47: 12853-59
-
(2008)
Biochemistry
, vol.47
, pp. 12853-12859
-
-
Lassila, J.K.1
Herschlag, D.2
-
145
-
-
0028896311
-
A relationship between protein stability and protein function
-
Shoichet BK, Baase WA, Kuroki R, Matthews BW. (1995). A relationship between protein stability and protein function. PNAS 92: 452-56
-
(1995)
PNAS
, vol.92
, pp. 452-456
-
-
Shoichet, B.K.1
Baase, W.A.2
Kuroki, R.3
Matthews, B.W.4
-
146
-
-
84879549646
-
What makes a protein fold amenable to functional innovation? Fold polarity and stability trade-offs
-
Dellus-Gur E, Toth-Petroczy A, Elias M, Tawfik DS. (2013). What makes a protein fold amenable to functional innovation? Fold polarity and stability trade-offs. J. Mol. Biol. 425: 2609-21
-
(2013)
J. Mol. Biol
, vol.425
, pp. 2609-2621
-
-
Dellus-Gur, E.1
Toth-Petroczy, A.2
Elias, M.3
Tawfik, D.S.4
-
147
-
-
84962415022
-
On the temperature dependence of enzyme-catalyzed rates
-
Arcus VL, Prentice EJ, Hobbs JK, Mulholland AJ, van der Kamp MW, et al. (2016). On the temperature dependence of enzyme-catalyzed rates. Biochemistry 55: 1681-88
-
(2016)
Biochemistry
, vol.55
, pp. 1681-1688
-
-
Arcus, V.L.1
Prentice, E.J.2
Hobbs, J.K.3
Mulholland, A.J.4
Van Der Kamp, M.W.5
-
148
-
-
80054974028
-
A tale of two isomerases: Compact versus extended active sites in ketosteroid isomerase and phosphoglucose isomerase
-
Somarowthu S, Brodkin HR, DAquino JA, Ringe D, Ondrechen MJ, Beuning PJ. (2011). A tale of two isomerases: compact versus extended active sites in ketosteroid isomerase and phosphoglucose isomerase. Biochemistry 50: 4923-35
-
(2011)
Biochemistry
, vol.50
, pp. 4923-4935
-
-
Somarowthu, S.1
Brodkin, H.R.2
D'Aquino, J.A.3
Ringe, D.4
Ondrechen, M.J.5
Beuning, P.J.6
-
149
-
-
0001305507
-
High-resolution crystal structures of 5-3-ketosteroid isomerase with and without a reaction intermediate analogue
-
Kim SW, Cha SS, Cho HS, Kim JS, Ha NC, et al. (1997). High-resolution crystal structures of 5-3-ketosteroid isomerase with and without a reaction intermediate analogue. Biochemistry 36: 14030-36
-
(1997)
Biochemistry
, vol.36
, pp. 14030-14036
-
-
Kim, S.W.1
Cha, S.S.2
Cho, H.S.3
Kim, J.S.4
Ha, N.C.5
-
150
-
-
84940495083
-
Response to comments on Extreme electric fields power catalysis in the active site of ketosteroid isomerase
-
Fried SD, Boxer SG. (2015). Response to comments on Extreme electric fields power catalysis in the active site of ketosteroid isomerase. Science 349: 936
-
(2015)
Science
, vol.349
, pp. 936
-
-
Fried, S.D.1
Boxer, S.G.2
-
151
-
-
83755181406
-
Evaluating the catalytic contribution from the oxyanion hole in ketosteroid isomerase
-
Schwans JP, Sunden F, Gonzalez A, Tsai Y, Herschlag D. (2011). Evaluating the catalytic contribution from the oxyanion hole in ketosteroid isomerase. J. Am. Chem. Soc. 133: 20052-55
-
(2011)
J. Am. Chem. Soc
, vol.133
, pp. 20052-20055
-
-
Schwans, J.P.1
Sunden, F.2
Gonzalez, A.3
Tsai, Y.4
Herschlag, D.5
-
152
-
-
0016232066
-
Catalysis, binding and enzyme-substrate complementarity
-
Fersht AR. (1974). Catalysis, binding and enzyme-substrate complementarity. Proc. R. Soc. B 187: 397-407
-
(1974)
Proc. R. Soc
, vol.B187
, pp. 397-407
-
-
Fersht, A.R.1
-
153
-
-
53849096731
-
Testing geometrical discrimination within an enzyme active site: Constrained hydrogen bonding in the ketosteroid isomerase oxyanion hole
-
Sigala PA, Kraut DA, Caaveiro JMM, Pybus B, Ruben EA, et al. (2008). Testing geometrical discrimination within an enzyme active site: constrained hydrogen bonding in the ketosteroid isomerase oxyanion hole. J. Am. Chem. Soc. 130: 13696-708
-
(2008)
J. Am. Chem. Soc
, vol.130
, pp. 13696-13708
-
-
Sigala, P.A.1
Kraut, D.A.2
Caaveiro, J.M.M.3
Pybus, B.4
Ruben, E.A.5
-
154
-
-
82455219011
-
Flexibility, diversity, and cooperativity: Pillars of enzyme catalysis
-
Hammes GG, Benkovic SJ, Hammes-Schiffer S. (2011). Flexibility, diversity, and cooperativity: pillars of enzyme catalysis. Biochemistry 50: 10422-30
-
(2011)
Biochemistry
, vol.50
, pp. 10422-10430
-
-
Hammes, G.G.1
Benkovic, S.J.2
Hammes-Schiffer, S.3
-
155
-
-
84923078953
-
Role of dynamics in enzyme catalysis: Substantial versus semantic controversies
-
Kohen A. (2015). Role of dynamics in enzyme catalysis: substantial versus semantic controversies. Acc. Chem. Res. 48: 466-73
-
(2015)
Acc. Chem. Res
, vol.48
, pp. 466-473
-
-
Kohen, A.1
-
156
-
-
77951226274
-
At the dawn of the 21st century: Is dynamics the missing link for understanding enzyme catalysis?
-
Kamerlin SCL, Warshel A. (2010). At the dawn of the 21st century: Is dynamics the missing link for understanding enzyme catalysis? Proteins 78: 1339-75
-
(2010)
Proteins
, vol.78
, pp. 1339-1375
-
-
Kamerlin, S.C.L.1
Warshel, A.2
-
157
-
-
84971264954
-
Defining and quantifying the role of dynamics in enzyme catalysis
-
Warshel A, Bora RP. (2016). Defining and quantifying the role of dynamics in enzyme catalysis. J. Chem. Phys. 144: 180901
-
(2016)
J. Chem. Phys
, vol.144
, pp. 180901
-
-
Warshel, A.1
Bora, R.P.2
-
158
-
-
80053641898
-
Direct measurement of the protein response to an electrostatic perturbation that mimics the catalytic cycle in ketosteroid isomerase
-
Jha SK, Ji M, Gaffney KJ, Boxer SG. (2011). Direct measurement of the protein response to an electrostatic perturbation that mimics the catalytic cycle in ketosteroid isomerase. PNAS 108: 16612-17
-
(2011)
PNAS
, vol.108
, pp. 16612-16617
-
-
Jha, S.K.1
Ji, M.2
Gaffney, K.J.3
Boxer, S.G.4
-
159
-
-
3042660150
-
Structure, dynamics, and catalytic function of dihydrofolate reductase
-
Schnell JR, Dyson HJ, Wright PE. (2004). Structure, dynamics, and catalytic function of dihydrofolate reductase. Annu. Rev. Biophys. Biomol. Struct. 33: 119-40
-
(2004)
Annu. Rev. Biophys. Biomol. Struct
, vol.33
, pp. 119-140
-
-
Schnell, J.R.1
Dyson, H.J.2
Wright, P.E.3
-
160
-
-
84858758329
-
Evidence that a dynamic knockout in Escherichia coli dihydrofolate reductase does not affect the chemical step of catalysis
-
Loveridge EJ, Behiry EM, Guo J, Allemann RK. (2012). Evidence that a dynamic knockout in Escherichia coli dihydrofolate reductase does not affect the chemical step of catalysis. Nat. Chem. 4: 292-97
-
(2012)
Nat. Chem
, vol.4
, pp. 292-297
-
-
Loveridge, E.J.1
Behiry, E.M.2
Guo, J.3
Allemann, R.K.4
-
161
-
-
84976333816
-
Correction to Evaluating the catalytic contribution from the oxyanion hole in ketosteroid isomerase
-
Schwans JP, Sunden F, Gonzalez A, Tsai Y, Herschlag D. (2016). Correction to Evaluating the catalytic contribution from the oxyanion hole in ketosteroid isomerase. J. Am. Chem. Soc. 138: 7801-2
-
(2016)
J. Am. Chem. Soc
, vol.138
, pp. 7801-7802
-
-
Schwans, J.P.1
Sunden, F.2
Gonzalez, A.3
Tsai, Y.4
Herschlag, D.5
|