메뉴 건너뛰기




Volumn 27, Issue 4, 2014, Pages 783-822

Emerging technologies for the clinical microbiology laboratory

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; MESSENGER RNA; RNA POLYMERASE;

EID: 84907798849     PISSN: 08938512     EISSN: 10986618     Source Type: Journal    
DOI: 10.1128/CMR.00003-14     Document Type: Article
Times cited : (231)

References (261)
  • 1
    • 84871705543 scopus 로고    scopus 로고
    • Point: Is the era of viral culture over in the clinical microbiology laboratory
    • Hodinka RL. 2013. Point: is the era of viral culture over in the clinical microbiology laboratory? J. Clin. Microbiol. 51:2–4. http://dx.doi.org/10.1128/JCM.02593-12.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 2-4
    • Hodinka, R.L.1
  • 2
    • 84879779075 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization-time of flight mass spectrometry: A fundamental shift in the routine practice of clinical microbiology
    • Clark AE, Kaleta EJ, Arora A, Wolk DM. 2013. Matrix-assisted laser desorption ionization-time of flight mass spectrometry: a fundamental shift in the routine practice of clinical microbiology. Clin. Microbiol. Rev. 26:547–603. http://dx.doi.org/10.1128/CMR.00072-12.
    • (2013) Clin. Microbiol. Rev , vol.26 , pp. 547-603
    • Clark, A.E.1    Kaleta, E.J.2    Arora, A.3    Wolk, D.M.4
  • 3
    • 77954605045 scopus 로고    scopus 로고
    • Validation of laboratory-developed molecular assays for infectious diseases
    • Burd EM. 2010. Validation of laboratory-developed molecular assays for infectious diseases. Clin. Microbiol. Rev. 23:550–576. http://dx.doi.org/10.1128/CMR.00074-09.
    • (2010) Clin. Microbiol. Rev , vol.23 , pp. 550-576
    • Burd, E.M.1
  • 4
    • 0025164789 scopus 로고
    • Evaluating diagnostic tests with imperfect standards
    • Valenstein PN. 1990. Evaluating diagnostic tests with imperfect standards. Am. J. Clin. Pathol. 93:252–258.
    • (1990) Am. J. Clin. Pathol , vol.93 , pp. 252-258
    • Valenstein, P.N.1
  • 7
    • 0037085729 scopus 로고    scopus 로고
    • Real-time PCR in virology
    • Mackay IM, Arden KE, Nitsche A. 2002. Real-time PCR in virology. Nucleic Acids Res. 30:1292–1305. http://dx.doi.org/10.1093/nar/30.6.1292.
    • (2002) Nucleic Acids Res , vol.30 , pp. 1292-1305
    • Mackay, I.M.1    Arden, K.E.2    Nitsche, A.3
  • 8
    • 0031810702 scopus 로고    scopus 로고
    • A new gold standard for the detection of Chlamydia trachomatis
    • Monif GR. 1998. A new gold standard for the detection of Chlamydia trachomatis? Infect. Dis. Obstet. Gynecol. 6:44–45. http://dx.doi.org/10.1155/S106474499800009X.
    • (1998) Infect. Dis. Obstet. Gynecol , vol.6 , pp. 44-45
    • Monif, G.R.1
  • 9
    • 77951026738 scopus 로고    scopus 로고
    • Clinical practice guidelines for Clostridium difficile infection in adults: 2010 update by the Society for Healthcare Epidemiology of America (SHEA) and the Infectious Diseases Society of America (IDSA
    • Cohen SH, Gerding DN, Johnson S, Kelly CP, Loo VG, McDonald LC, Pepin J, Wilcox MH. 2010. Clinical practice guidelines for Clostridium difficile infection in adults: 2010 update by the Society for Healthcare Epidemiology of America (SHEA) and the Infectious Diseases Society of America (IDSA). Infect. Control Hosp. Epidemiol. 31:431–455. http://dx.doi.org/10.1086/651706.
    • (2010) Infect. Control Hosp. Epidemiol , vol.31 , pp. 431-455
    • Cohen, S.H.1    Gerding, D.N.2    Johnson, S.3    Kelly, C.P.4    Loo, V.G.5    McDonald, L.C.6    Pepin, J.7    Wilcox, M.H.8
  • 10
    • 36349015978 scopus 로고    scopus 로고
    • Currently used nucleic acid amplification tests for the detection of viruses and atypicals in acute respiratory infections
    • Ieven M. 2007. Currently used nucleic acid amplification tests for the detection of viruses and atypicals in acute respiratory infections. J. Clin. Virol. 40:259–276. http://dx.doi.org/10.1016/j.jcv.2007.08.012.
    • (2007) J. Clin. Virol , vol.40 , pp. 259-276
    • Ieven, M.1
  • 12
    • 33748782812 scopus 로고    scopus 로고
    • Comparison of transcription-mediated amplification and PCR assay results for various genital specimen types for detection of Myco-plasma genitalium
    • Wroblewski JK, Manhart LE, Dickey KA, Hudspeth MK, Totten PA. 2006. Comparison of transcription-mediated amplification and PCR assay results for various genital specimen types for detection of Myco-plasma genitalium. J. Clin. Microbiol. 44:3306–3312. http://dx.doi.org/10.1128/JCM.00553-06.
    • (2006) J. Clin. Microbiol , vol.44 , pp. 3306-3312
    • Wroblewski, J.K.1    Manhart, L.E.2    Dickey, K.A.3    Hudspeth, M.K.4    Totten, P.A.5
  • 13
    • 0037236789 scopus 로고    scopus 로고
    • Performance of the APTIMA Combo 2 assay for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in female urine and endocervical swab specimens
    • Gaydos CA, Quinn TC, Willis D, Weissfeld A, Hook EW, Martin DH, Ferrero DV, Schachter J. 2003. Performance of the APTIMA Combo 2 assay for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in female urine and endocervical swab specimens. J. Clin. Microbiol. 41:304–309. http://dx.doi.org/10.1128/JCM.41.1.304-309.2003.
    • (2003) J. Clin. Microbiol , vol.41 , pp. 304-309
    • Gaydos, C.A.1    Quinn, T.C.2    Willis, D.3    Weissfeld, A.4    Hook, E.W.5    Martin, D.H.6    Ferrero, D.V.7    Schachter, J.8
  • 16
    • 84862744693 scopus 로고    scopus 로고
    • Performance of the Cobas CT/NG test compared to the Aptima AC2 and Viper CTQ/GCQ assays for detection ofChlamydia trachomatisandNeisseria gonorrhoeae
    • Van Der Pol B, Liesenfeld O, Williams JA, Taylor SN, Lillis RA, Body BA, Nye M, Eisenhut C, Hook EW, III. 2012. Performance of the Cobas CT/NG test compared to the Aptima AC2 and Viper CTQ/GCQ assays for detection ofChlamydia trachomatisandNeisseria gonorrhoeae.J.Clin. Microbiol. 50:2244–2249. http://dx.doi.org/10.1128/JCM.06481-11.
    • (2012) J.Clin. Microbiol , vol.50 , pp. 2244-2249
    • Van Der Pol, B.1    Liesenfeld, O.2    Williams, J.A.3    Taylor, S.N.4    Lillis, R.A.5    Body, B.A.6    Nye, M.7    Eisenhut, C.8    Hook, E.W.9
  • 17
    • 85027944953 scopus 로고    scopus 로고
    • Comparison of the BD Viper System with XTR Technology to the Gen-Probe APTIMA COMBO2Assay using the TIGRIS DTS system for the detection of Chlamydia trachomatis and Neisseria gonorrhoeae in urine specimens
    • Mushanski LM, Brandt K, Coffin N, Levett PN, Horsman GB, Rank EL. 2012. Comparison of the BD Viper System with XTR Technology to the Gen-Probe APTIMA COMBO2Assay using the TIGRIS DTS system for the detection of Chlamydia trachomatis and Neisseria gonorrhoeae in urine specimens. Sex. Transm. Dis. 39:514–517. http://dx.doi.org/10.1097/OLQ.0b013e31824f2f5b.
    • (2012) Sex. Transm. Dis , vol.39 , pp. 514-517
    • Mushanski, L.M.1    Brandt, K.2    Coffin, N.3    Levett, P.N.4    Horsman, G.B.5    Rank, E.L.6
  • 18
    • 84871171761 scopus 로고    scopus 로고
    • Assessment of self taken swabs versus clinician taken swab cultures for diagnosing gonorrhoea in women: Single centre, diagnostic accuracy study
    • Stewart CM, Schoeman SA, Booth RA, Smith SD, Wilcox MH, Wilson JD. 2012. Assessment of self taken swabs versus clinician taken swab cultures for diagnosing gonorrhoea in women: single centre, diagnostic accuracy study. BMJ 345:e8107. http://dx.doi.org/10.1136/bmj.e8107.
    • (2012) BMJ , pp. 345
    • Stewart, C.M.1    Schoeman, S.A.2    Booth, R.A.3    Smith, S.D.4    Wilcox, M.H.5    Wilson, J.D.6
  • 19
    • 84874072123 scopus 로고    scopus 로고
    • Vaginal swabs are the optimal specimen for detection of genital Chlamydia trachomatis or Neisseria gonorrhoeae using the Cobas 4800 CT/NG test
    • Van Der Pol B, Taylor SN, Liesenfeld O, Williams JA, Hook EW, III. 2013. Vaginal swabs are the optimal specimen for detection of genital Chlamydia trachomatis or Neisseria gonorrhoeae using the Cobas 4800 CT/NG test. Sex. Transm. Dis. 40:247–250. http://dx.doi.org/10.1097/OLQ.0b013e3182717833.
    • (2013) Sex. Transm. Dis , vol.40 , pp. 247-250
    • Van Der Pol, B.1    Taylor, S.N.2    Liesenfeld, O.3    Williams, J.A.4    Hook, E.W.5
  • 21
    • 78651353217 scopus 로고    scopus 로고
    • Importance of methicillin-resistant Staphylococcus aureus eradication in carriers to prevent postoperative methicillin-resistant Staphylococcus au-reus surgical site infection
    • Pofahl WE, Ramsey KM, Nobles DL, Cochran MK, Goettler C. 2011. Importance of methicillin-resistant Staphylococcus aureus eradication in carriers to prevent postoperative methicillin-resistant Staphylococcus au-reus surgical site infection. Am. Surg. 77:27–31.
    • (2011) Am. Surg , vol.77 , pp. 27-31
    • Pofahl, W.E.1    Ramsey, K.M.2    Nobles, D.L.3    Cochran, M.K.4    Goettler, C.5
  • 22
    • 43949093775 scopus 로고    scopus 로고
    • Impact of preoperative screening for meticil-lin-resistant Staphylococcus aureus by real-time polymerase chain reaction in patients undergoing cardiac surgery
    • Jog S, Cunningham R, Cooper S, Wallis M, Marchbank A, Vasco-Knight P, Jenks PJ. 2008. Impact of preoperative screening for meticil-lin-resistant Staphylococcus aureus by real-time polymerase chain reaction in patients undergoing cardiac surgery. J. Hosp. Infect. 69:124–130. http://dx.doi.org/10.1016/j.jhin.2008.02.008.
    • (2008) J. Hosp. Infect , vol.69 , pp. 124-130
    • Jog, S.1    Cunningham, R.2    Cooper, S.3    Wallis, M.4    Marchbank, A.5    Vasco-Knight, P.6    Jenks, P.J.7
  • 23
    • 77957869461 scopus 로고    scopus 로고
    • The economic effect of screening orthopedic surgery patients preoperatively for methicillin-resistant Staphylococcus aureus
    • Lee BY, Wiringa AE, Bailey RR, Goyal V, Tsui B, Lewis GJ, Muder RR, Harrison LH. 2010. The economic effect of screening orthopedic surgery patients preoperatively for methicillin-resistant Staphylococcus aureus. Infect. Control Hosp. Epidemiol. 31:1130–1138. http://dx.doi.org/10.1086/656591.
    • (2010) Infect. Control HospEpidemiol , vol.31 , pp. 1130-1138
    • Lee, B.Y.1    Wiringa, A.E.2    Bailey, R.R.3    Goyal, V.4    Tsui, B.5    Lewis, G.J.6    Muder, R.R.7    Harrison, L.H.8
  • 24
    • 84884940432 scopus 로고    scopus 로고
    • Laboratory diagnosis of Clostridium difficile infections: There is light at the end of the colon
    • Brecher SM, Novak-Weekley SM, Nagy E. 2013. Laboratory diagnosis of Clostridium difficile infections: there is light at the end of the colon. Clin. Infect. Dis. 57:1175–1181. http://dx.doi.org/10.1093/cid/cit424.
    • (2013) Clin. Infect. Dis , vol.57 , pp. 1175-1181
    • Brecher, S.M.1    Novak-Weekley, S.M.2    Nagy, E.3
  • 26
    • 84868574552 scopus 로고    scopus 로고
    • Overcoming barriers to effective recognition and diagnosis of Clostridium difficile infection
    • Wilcox MH. 2012. Overcoming barriers to effective recognition and diagnosis of Clostridium difficile infection. Clin. Microbiol. Infect. 18(Suppl 6):S13–S20.
    • (2012) Clin. Microbiol. Infect , vol.18 , pp. S13-S20
    • Wilcox, M.H.1
  • 27
    • 70649095042 scopus 로고    scopus 로고
    • European Society of Clinical Microbiology and Infectious Diseases (ESCMID): Data review and recommendations for diagnosing Clostridium difficile-infection (CDI
    • Crobach MJ, Dekkers OM, Wilcox MH, Kuijper EJ. 2009. European Society of Clinical Microbiology and Infectious Diseases (ESCMID): data review and recommendations for diagnosing Clostridium difficile-infection (CDI). Clin. Microbiol. Infect. 15:1053–1066. http://dx.doi.org/10.1111/j.1469-0691.2009.03098.x.
    • (2009) Clin. Microbiol. Infect , vol.15 , pp. 1053-1066
    • Crobach, M.J.1    Dekkers, O.M.2    Wilcox, M.H.3    Kuijper, E.J.4
  • 31
    • 84879764131 scopus 로고    scopus 로고
    • Diagnosis of Clostridium difficile infection: An ongoing conundrum for clinicians and for clinical laboratories
    • Burnham CA, Carroll KC. 2013. Diagnosis of Clostridium difficile infection: an ongoing conundrum for clinicians and for clinical laboratories. Clin. Microbiol. Rev. 26:604–630. http://dx.doi.org/10.1128/CMR.00016-13.
    • (2013) Clin. Microbiol. Rev , vol.26 , pp. 604-630
    • Burnham, C.A.1    Carroll, K.C.2
  • 32
    • 34548423655 scopus 로고    scopus 로고
    • Outbreaks of respiratory illness mistakenly attributed to pertussis—New Hampshire, Massachusetts, and Tennessee, 2004-2006
    • CDC. 2007. Outbreaks of respiratory illness mistakenly attributed to pertussis—New Hampshire, Massachusetts, and Tennessee, 2004-2006. MMWR Morb. Mortal. Wkly. Rep. 56:837–842.
    • (2007) MMWR Morb. Mortal. Wkly. Rep , vol.56 , pp. 837-842
  • 33
    • 74049153059 scopus 로고    scopus 로고
    • Outbreak of atypical pertussis detected by polymerase chain reaction in immunized preschool-aged children
    • Waters V, Jamieson F, Richardson SE, Finkelstein M, Wormsbecker A, Halperin SA. 2009. Outbreak of atypical pertussis detected by polymerase chain reaction in immunized preschool-aged children. Pediatr. Infect. Dis. J. 28:582–587. http://dx.doi.org/10.1097/INF.0b013e318197fac1.
    • (2009) Pediatr. Infect. Dis. J , vol.28 , pp. 582-587
    • Waters, V.1    Jamieson, F.2    Richardson, S.E.3    Finkelstein, M.4    Wormsbecker, A.5    Halperin, S.A.6
  • 34
    • 74049160699 scopus 로고    scopus 로고
    • What is the significance of a high cycle threshold positive IS481 PCR for Bordetella pertussis
    • Author reply, 28:1143–1144
    • Papenburg J, Fontela P. 2009. What is the significance of a high cycle threshold positive IS481 PCR for Bordetella pertussis? Pediatr. Infect. Dis. J. 28:1143. (Author reply, 28:1143–1144.)
    • (2009) Pediatr. Infect. Dis. J , vol.28 , pp. 1143
    • Papenburg, J.1    Fontela, P.2
  • 35
    • 55849093876 scopus 로고    scopus 로고
    • Use of Bordetella pertussis BP3385 to establish a cutoff value for an IS481-targeted real-time PCR assay
    • Guthrie JL, Seah C, Brown S, Tang P, Jamieson F, Drews SJ. 2008. Use of Bordetella pertussis BP3385 to establish a cutoff value for an IS481-targeted real-time PCR assay. J.Clin. Microbiol. 46:3798–3799. http://dx.doi.org/10.1128/JCM.01551-08.
    • (2008) J.Clin. Microbiol , vol.46 , pp. 3798-3799
    • Guthrie, J.L.1    Seah, C.2    Brown, S.3    Tang, P.4    Jamieson, F.5    Drews, S.J.6
  • 37
    • 0035940965 scopus 로고    scopus 로고
    • Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation
    • Mori Y, Nagamine K, Tomita N, Notomi T. 2001. Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation. Biochem. Biophys. Res. Com-mun. 289:150–154. http://dx.doi.org/10.1006/bbrc.2001.5921.
    • (2001) Biochem. Biophys. Res. Com-mun , vol.289 , pp. 150-154
    • Mori, Y.1    Nagamine, K.2    Tomita, N.3    Notomi, T.4
  • 38
    • 2442610695 scopus 로고    scopus 로고
    • Real-time turbidimetry of LAMP reaction for quantifying template DNA
    • Mori Y, Kitao M, Tomita N, Notomi T. 2004. Real-time turbidimetry of LAMP reaction for quantifying template DNA. J. Biochem. Biophys. Methods 59:145–157. http://dx.doi.org/10.1016/j.jbbm.2003.12.005.
    • (2004) J. Biochem. Biophys. Methods , vol.59 , pp. 145-157
    • Mori, Y.1    Kitao, M.2    Tomita, N.3    Notomi, T.4
  • 39
    • 84876761270 scopus 로고    scopus 로고
    • Multicenter clinical evaluation of the illumigene group A Streptococcus DNA amplification assay for detection of group A Streptococcus from pharyngeal swabs
    • Anderson NW, Buchan BW, Mayne D, Mortensen JE, Mackey TL, Ledeboer NA. 2013. Multicenter clinical evaluation of the illumigene group A Streptococcus DNA amplification assay for detection of group A Streptococcus from pharyngeal swabs. J. Clin. Microbiol. 51:1474–1477. http://dx.doi.org/10.1128/JCM.00176-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 1474-1477
    • Anderson, N.W.1    Buchan, B.W.2    Mayne, D.3    Mortensen, J.E.4    Mackey, T.L.5    Ledeboer, N.A.6
  • 40
    • 84871707666 scopus 로고    scopus 로고
    • Evaluation of Clostridium difficile fecal load and limit of detection during a prospective comparison of two molecular tests, the illumigene C. difficile and Xpert C
    • Gyorke CE, Wang S, Leslie JL, Cohen SH, Solnick JV, Polage CR. 2013. Evaluation of Clostridium difficile fecal load and limit of detection during a prospective comparison of two molecular tests, the illumigene C. difficile and Xpert C. difficile/Epi tests. J. Clin. Microbiol. 51:278–280. http://dx.doi.org/10.1128/JCM.02120-12.
    • (2013) difficile/Epi tests. J. Clin. Microbiol , vol.51 , pp. 278-280
    • Gyorke, C.E.1    Wang, S.2    Leslie, J.L.3    Cohen, S.H.4    Solnick, J.V.5    Polage, C.R.6
  • 41
    • 84861743930 scopus 로고    scopus 로고
    • Comparison of commercial molecular assays for toxigenic Clos-tridium difficile detection in stools: BD GeneOhm Cdiff, XPert C. difficile and illumigene C
    • Viala C, Le Monnier A, Maataoui N, Rousseau C, Collignon A, Poilane I. 2012. Comparison of commercial molecular assays for toxigenic Clos-tridium difficile detection in stools: BD GeneOhm Cdiff, XPert C. difficile and illumigene C. difficile. J. Microbiol. Methods 90:83–85. http://dx.doi.org/10.1016/j.mimet.2012.04.017.
    • (2012) difficile. J. Microbiol. Methods , vol.90 , pp. 83-85
    • Viala, C.1    Le Monnier, A.2    Maataoui, N.3    Rousseau, C.4    Collignon, A.5    Poilane, I.6
  • 42
    • 84858603395 scopus 로고    scopus 로고
    • Detection of toxigenic Clostridium difficile: Comparison of the cell culture neutralization, Xpert C. difficile, Xpert C. difficile/Epi, and Illumigene C
    • Pancholi P, Kelly C, Raczkowski M, Balada-Llasat JM. 2012. Detection of toxigenic Clostridium difficile: comparison of the cell culture neutralization, Xpert C. difficile, Xpert C. difficile/Epi, and Illumigene C. difficile assays. J. Clin. Microbiol. 50:1331–1335. http://dx.doi.org/10.1128/JCM.06597-11.
    • (2012) difficile assays. J. Clin. Microbiol , vol.50 , pp. 1331-1335
    • Pancholi, P.1    Kelly, C.2    Raczkowski, M.3    Balada-Llasat, J.M.4
  • 43
    • 84869217890 scopus 로고    scopus 로고
    • Multicenter clinical evaluation of the portrait toxigenic C. difficile assay for detection of toxigenic Clostridium difficile strains in clinical stool specimens
    • Buchan BW, Mackey TL, Daly JA, Alger G, Denys GA, Peterson LR, Kehl SC, Ledeboer NA. 2012. Multicenter clinical evaluation of the portrait toxigenic C. difficile assay for detection of toxigenic Clostridium difficile strains in clinical stool specimens. J. Clin. Microbiol. 50:3932–3936. http://dx.doi.org/10.1128/JCM.02083-12.
    • (2012) J. Clin. Microbiol , vol.50 , pp. 3932-3936
    • Buchan, B.W.1    Mackey, T.L.2    Daly, J.A.3    Alger, G.4    Denys, G.A.5    Peterson, L.R.6    Kehl, S.C.7    Ledeboer, N.A.8
  • 44
    • 84889869548 scopus 로고    scopus 로고
    • Detection of Streptococcus pyogenes using illumigene group A Streptococcus assay
    • Henson AM, Carter D, Todd K, Shulman ST, Zheng X. 2013. Detection of Streptococcus pyogenes using illumigene group A Streptococcus assay. J. Clin. Microbiol. 51:4207–4209. http://dx.doi.org/10.1128/JCM.01892-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 4207-4209
    • Henson, A.M.1    Carter, D.2    Todd, K.3    Shulman, S.T.4    Zheng, X.5
  • 45
    • 84902505019 scopus 로고    scopus 로고
    • Bench-scale experiments for the development of a unified loop-mediated isothermal amplification (LAMP) assay for the in vitro diagnosis of Leishmania species’ promastigotes
    • Karani M, Sotiriadou I, Plutzer J, Karanis P. 2014. Bench-scale experiments for the development of a unified loop-mediated isothermal amplification (LAMP) assay for the in vitro diagnosis of Leishmania species’ promastigotes. Epidemiol. Infect. 142:1671–1677. http://dx.doi.org/10.1017/S0950268813002677.
    • (2014) Epidemiol. Infect , vol.142 , pp. 1671-1677
    • Karani, M.1    Sotiriadou, I.2    Plutzer, J.3    Karanis, P.4
  • 46
    • 84865959349 scopus 로고    scopus 로고
    • Loop-mediated isothermal amplification assay for rapid detection of hepatitis C virus
    • Kargar M, Askari A, Doosti A, Ghorbani-Dalini S. 2012. Loop-mediated isothermal amplification assay for rapid detection of hepatitis C virus. Indian J. Virol. 23:18–23. http://dx.doi.org/10.1007/s13337-012 -0067-2.
    • (2012) Indian J. Virol , vol.23 , pp. 18-23
    • Kargar, M.1    Askari, A.2    Doosti, A.3    Ghorbani-Dalini, S.4
  • 47
    • 67349221789 scopus 로고    scopus 로고
    • Rapid identification of Giardia duodenalis by loop-mediated isothermal amplification (LAMP) from faecal and environmental samples and comparative findings by PCR and real-time PCR methods
    • Plutzer J, Karanis P. 2009. Rapid identification of Giardia duodenalis by loop-mediated isothermal amplification (LAMP) from faecal and environmental samples and comparative findings by PCR and real-time PCR methods. Parasitol. Res. 104:1527–1533. http://dx.doi.org/10.1007/s00436-009-1391-3.
    • (2009) Parasitol. Res , vol.104 , pp. 1527-1533
    • Plutzer, J.1    Karanis, P.2
  • 49
    • 84880951891 scopus 로고    scopus 로고
    • Highly sensitive detection of malaria parasitemia in a malaria-endemic setting: Performance of a new loop-mediated isothermal amplification kitinaremote clinicin Uganda
    • Hopkins H, Gonzalez IJ, Polley SD, Angutoko P, Ategeka J, Asiimwe C, Agaba B, Kyabayinze DJ, Sutherland CJ, Perkins MD, Bell D. 2013. Highly sensitive detection of malaria parasitemia in a malaria-endemic setting: performance of a new loop-mediated isothermal amplification kitinaremote clinicin Uganda. J.Infect. Dis. 208:645–652. http://dx.doi.org/10.1093/infdis/jit184.
    • (2013) J.Infect. Dis , vol.208 , pp. 645-652
    • Hopkins, H.1    Gonzalez, I.J.2    Polley, S.D.3    Angutoko, P.4    Ategeka, J.5    Asiimwe, C.6    Agaba, B.7    Kyabayinze, D.J.8    Sutherland, C.J.9    Perkins, M.D.10    Bell, D.11
  • 51
    • 31844450172 scopus 로고    scopus 로고
    • Sensitive and inexpensive molecular test for falciparum malaria: Detecting Plasmodium falciparum DNA directly from heat-treated blood by loop-mediated isothermal amplification
    • Poon LL, Wong BW, Ma EH, Chan KH, Chow LM, Abeyewickreme W, Tangpukdee N, Yuen KY, Guan Y, Looareesuwan S, Peiris JS. 2006. Sensitive and inexpensive molecular test for falciparum malaria: detecting Plasmodium falciparum DNA directly from heat-treated blood by loop-mediated isothermal amplification. Clin. Chem. 52:303–306. http://dx.doi.org/10.1373/clinchem.2005.057901.
    • (2006) Clin. Chem , vol.52 , pp. 303-306
    • Poon, L.L.1    Wong, B.W.2    Ma, E.H.3    Chan, K.H.4    Chow, L.M.5    Abeyewickreme, W.6    Tangpukdee, N.7    Yuen, K.Y.8    Guan, Y.9    Looareesuwan, S.10    Peiris, J.S.11
  • 52
    • 34548105961 scopus 로고    scopus 로고
    • Detection of four Plasmodium species by genus- and species-specific loop-mediated isothermal amplification for clinical diagnosis
    • Han ET, Watanabe R, Sattabongkot J, Khuntirat B, Sirichaisinthop J, Iriko H, Jin L, Takeo S, Tsuboi T. 2007. Detection of four Plasmodium species by genus- and species-specific loop-mediated isothermal amplification for clinical diagnosis. J. Clin. Microbiol. 45:2521–2528. http://dx.doi.org/10.1128/JCM.02117-06.
    • (2007) J. Clin. Microbiol , vol.45 , pp. 2521-2528
    • Han, E.T.1    Watanabe, R.2    Sattabongkot, J.3    Khuntirat, B.4    Sirichaisinthop, J.5    Iriko, H.6    Jin, L.7    Takeo, S.8    Tsuboi, T.9
  • 53
    • 4444258850 scopus 로고    scopus 로고
    • Helicase-dependent isothermal DNA amplification
    • Vincent M, Xu Y, Kong H. 2004. Helicase-dependent isothermal DNA amplification. EMBO Rep. 5:795–800. http://dx.doi.org/10.1038/sj.embor.7400200.
    • (2004) EMBO Rep , vol.5 , pp. 795-800
    • Vincent, M.1    Xu, Y.2    Kong, H.3
  • 54
    • 84875498310 scopus 로고    scopus 로고
    • Low cost extraction and isothermal amplification of DNA for infectious diarrhea diagnosis
    • Huang S, Do J, Mahalanabis M, Fan A, Zhao L, Jepeal L, Singh SK, Klapperich CM. 2013. Low cost extraction and isothermal amplification of DNA for infectious diarrhea diagnosis. PLoS One 8:e60059. http://dx.doi.org/10.1371/journal.pone.0060059.
    • (2013) PLoS One , vol.8
    • Huang, S.1    Do, J.2    Mahalanabis, M.3    Fan, A.4    Zhao, L.5    Jepeal, L.6    Singh, S.K.7    Klapperich, C.M.8
  • 55
    • 84864823112 scopus 로고    scopus 로고
    • Direct detection of nasal Staphylococcus aureus carriage via helicase-dependent isothermal amplification and chip hybridization
    • Frech GC, Munns D, Jenison RD, Hicke BJ. 2012. Direct detection of nasal Staphylococcus aureus carriage via helicase-dependent isothermal amplification and chip hybridization. BMC Res. Notes 5:430. http://dx.doi.org/10.1186/1756-0500-5-430.
    • (2012) BMC Res. Notes , vol.5 , pp. 430
    • Frech, G.C.1    Munns, D.2    Jenison, R.D.3    Hicke, B.J.4
  • 56
    • 84882243100 scopus 로고    scopus 로고
    • Detection and species identification of malaria parasites by isothermal tHDA amplification directly from human blood without sample preparation
    • Li Y, Kumar N, Gopalakrishnan A, Ginocchio C, Manji R, Bythrow M, Lemieux B, Kong H. 2013. Detection and species identification of malaria parasites by isothermal tHDA amplification directly from human blood without sample preparation. J. Mol. Diagn. 15:634–641. http://dx.doi.org/10.1016/j.jmoldx.2013.05.005.
    • (2013) J. Mol. Diagn , vol.15 , pp. 634-641
    • Li, Y.1    Kumar, N.2    Gopalakrishnan, A.3    Ginocchio, C.4    Manji, R.5    Bythrow, M.6    Lemieux, B.7    Kong, H.8
  • 57
    • 84863858481 scopus 로고    scopus 로고
    • Comparative clinical evaluation of the IsoAmp HSV Assay with ELVIS HSV culture/ID/typing test system for the detection of herpes simplex virus in genital and oral lesions
    • Miller NS, Yen-Lieberman B, Poulter MD, Tang YW, Granato PA. 2012. Comparative clinical evaluation of the IsoAmp HSV Assay with ELVIS HSV culture/ID/typing test system for the detection of herpes simplex virus in genital and oral lesions. J. Clin. Virol. 54:355–358. http://dx.doi.org/10.1016/j.jcv.2012.04.004.
    • (2012) J. Clin. Virol , vol.54 , pp. 355-358
    • Miller, N.S.1    Yen-Lieberman, B.2    Poulter, M.D.3    Tang, Y.W.4    Granato, P.A.5
  • 58
    • 84857127395 scopus 로고    scopus 로고
    • Thermophilic helicase-dependent DNA amplification using the IsoAmp SE experimental kit for rapid detection of Streptococcus equi subspecies equi in clinical samples
    • Artiushin S, Tong Y, Timoney J, Lemieux B, Schlegel A, Kong H. 2011. Thermophilic helicase-dependent DNA amplification using the IsoAmp SE experimental kit for rapid detection of Streptococcus equi subspecies equi in clinical samples. J. Vet. Diagn. Invest. 23:909–914. http://dx.doi.org/10.1177/1040638711416968.
    • (2011) J. Vet. Diagn. Invest , vol.23 , pp. 909-914
    • Artiushin, S.1    Tong, Y.2    Timoney, J.3    Lemieux, B.4    Schlegel, A.5    Kong, H.6
  • 61
    • 84907786532 scopus 로고    scopus 로고
    • Screening, isolation, and decolonization strategies for vancomycin-resistant entero-cocci or extended spectrum beta-lactamase-producing organisms: A systematic review of the clinical evidence and health services impact
    • Ho C, Lau A, Cimon K, Farrah K, Gardam M. 2013. Screening, isolation, and decolonization strategies for vancomycin-resistant entero-cocci or extended spectrum beta-lactamase-producing organisms: a systematic review of the clinical evidence and health services impact. CADTH Technol. Overviews 3:e3202.
    • (2013) CADTH Technol. Overviews , vol.3
    • Ho, C.1    Lau, A.2    Cimon, K.3    Farrah, K.4    Gardam, M.5
  • 62
    • 77958556787 scopus 로고    scopus 로고
    • An antimicrobial stewardship program’s impact with rapid polymerase chain reaction methicillin-resistant Staphylococcus aureus/S. aureus blood culture test in patients with S. aureus bacteremia
    • Bauer KA, West JE, Balada-Llasat JM, Pancholi P, Stevenson KB, Goff DA. 2010. An antimicrobial stewardship program’s impact with rapid polymerase chain reaction methicillin-resistant Staphylococcus aureus/S. aureus blood culture test in patients with S. aureus bacteremia. Clin. Infect. Dis. 51:1074–1080. http://dx.doi.org/10.1086/656623.
    • (2010) Clin. Infect. Dis , vol.51 , pp. 1074-1080
    • Bauer, K.A.1    West, J.E.2    Balada-Llasat, J.M.3    Pancholi, P.4    Stevenson, K.B.5    Goff, D.A.6
  • 63
    • 84555196144 scopus 로고    scopus 로고
    • Clinical impact of a real-time PCR assay for rapid identification of staphylococcal bacteremia
    • Frye AM, Baker CA, Rustvold DL, Heath KA, Hunt J, Leggett JE, Oethinger M. 2012. Clinical impact of a real-time PCR assay for rapid identification of staphylococcal bacteremia. J. Clin. Microbiol. 50:127–133. http://dx.doi.org/10.1128/JCM.06169-11.
    • (2012) J. Clin. Microbiol , vol.50 , pp. 127-133
    • Frye, A.M.1    Baker, C.A.2    Rustvold, D.L.3    Heath, K.A.4    Hunt, J.5    Leggett, J.E.6    Oethinger, M.7
  • 64
    • 84881484942 scopus 로고    scopus 로고
    • Molecular approaches and biomarkers for detection of Mycobacterium tuberculosis
    • Luo RF, Banaei N. 2013. Molecular approaches and biomarkers for detection of Mycobacterium tuberculosis. Clin. Lab. Med. 33:553–566. http://dx.doi.org/10.1016/j.cll.2013.03.012.
    • (2013) Clin. Lab. Med , vol.33 , pp. 553-566
    • Luo, R.F.1    Banaei, N.2
  • 65
    • 84894251772 scopus 로고    scopus 로고
    • Rapid molecular testing for TB to guide respiratory isolation in the U.S.: A cost-benefit analysis
    • Millman AJ, Dowdy DW, Miller CR, Brownell R, Metcalfe JZ, Catta-manchi A, Davis JL. 2013. Rapid molecular testing for TB to guide respiratory isolation in the U.S.: a cost-benefit analysis. PLoS One 8:e79669. http://dx.doi.org/10.1371/journal.pone.0079669.
    • (2013) PLoS One , vol.8
    • Millman, A.J.1    Dowdy, D.W.2    Miller, C.R.3    Brownell, R.4    Metcalfe, J.Z.5    Catta-Manchi, A.6    Davis, J.L.7
  • 68
    • 0024245082 scopus 로고
    • Deletion screening of the Duchenne muscular dystrophy locus via multiplex DNA amplification
    • Chamberlain JS, Gibbs RA, Ranier JE, Nguyen PN, Caskey CT. 1988. Deletion screening of the Duchenne muscular dystrophy locus via multiplex DNA amplification. Nucleic Acids Res. 16:11141–11156. http://dx.doi.org/10.1093/nar/16.23.11141.
    • (1988) Nucleic Acids Res , vol.16 , pp. 11141-11156
    • Chamberlain, J.S.1    Gibbs, R.A.2    Ranier, J.E.3    Nguyen, P.N.4    Caskey, C.T.5
  • 69
    • 0033976857 scopus 로고    scopus 로고
    • Impact of sample type on rapid detection of influenza virus A by cytospin-enhanced immunofluores-cence and membrane enzyme-linked immunosorbent assay
    • Landry ML, Cohen S, Ferguson D. 2000. Impact of sample type on rapid detection of influenza virus A by cytospin-enhanced immunofluores-cence and membrane enzyme-linked immunosorbent assay. J. Clin. Mi-crobiol. 38:429–430.
    • (2000) J. Clin. Mi-crobiol , vol.38 , pp. 429-430
    • Landry, M.L.1    Cohen, S.2    Ferguson, D.3
  • 70
    • 0346462984 scopus 로고    scopus 로고
    • Multiplex real-time PCR assay for detection of influenza and human respiratory syncytial viruses
    • Boivin G, Cote S, Dery P, De Serres G, Bergeron MG. 2004. Multiplex real-time PCR assay for detection of influenza and human respiratory syncytial viruses. J. Clin. Microbiol. 42:45–51. http://dx.doi.org/10.1128/JCM.42.1.45-51.2004.
    • (2004) J. Clin. Microbiol , vol.42 , pp. 45-51
    • Boivin, G.1    Cote, S.2    Dery, P.3    De Serres, G.4    Bergeron, M.G.5
  • 71
    • 70349754214 scopus 로고    scopus 로고
    • Evaluation of the Cepheid respiratory syncytial virus and influenza virus A/B real-time PCR analyte specific reagent
    • Sails AD, Saunders D, Airs S, Roberts D, Eltringham G, Magee JG. 2009. Evaluation of the Cepheid respiratory syncytial virus and influenza virus A/B real-time PCR analyte specific reagent. J. Virol. Methods 162: 88–90. http://dx.doi.org/10.1016/j.jviromet.2009.07.020.
    • (2009) J. Virol. Methods , vol.162 , pp. 88-90
    • Sails, A.D.1    Saunders, D.2    Airs, S.3    Roberts, D.4    Eltringham, G.5    Magee, J.G.6
  • 72
    • 84881554317 scopus 로고    scopus 로고
    • Comparison of two multiplexed PCR assays for the detection of HSV-1, HSV-2, and VZV with extracted and unextracted cutaneous and mucosal specimens
    • Buelow DR, Bankowski MJ, Fofana D, Gu Z, Pounds S, Hayden RT. 2013. Comparison of two multiplexed PCR assays for the detection of HSV-1, HSV-2, and VZV with extracted and unextracted cutaneous and mucosal specimens. J. Clin. Virol. 58:84–88. http://dx.doi.org/10.1016/j.jcv.2013.05.008.
    • (2013) J. Clin. Virol , vol.58 , pp. 84-88
    • Buelow, D.R.1    Bankowski, M.J.2    Fofana, D.3    Gu, Z.4    Pounds, S.5    Hayden, R.T.6
  • 73
    • 84889869928 scopus 로고    scopus 로고
    • Clinical evaluation of a real-time PCR assay for identification of Salmonella, Shigella, Campylobacter (Campylobacter jejuni and C. coli), and Shiga toxin-producing Escherichia coli isolates in stool specimens
    • Buchan BW, Olson WJ, Pezewski M, Marcon MJ, Novicki T, Uphoff TS, Chandramohan L, Revell P, Ledeboer NA. 2013. Clinical evaluation of a real-time PCR assay for identification of Salmonella, Shigella, Campylobacter (Campylobacter jejuni and C. coli), and Shiga toxin-producing Escherichia coli isolates in stool specimens. J. Clin. Microbiol. 51:4001-4007. http://dx.doi.org/10.1128/JCM.02056-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 4001-4007
    • Buchan, B.W.1    Olson, W.J.2    Pezewski, M.3    Marcon, M.J.4    Novicki, T.5    Uphoff, T.S.6    Chandramohan, L.7    Revell, P.8    Ledeboer, N.A.9
  • 74
    • 70449688260 scopus 로고    scopus 로고
    • Failure of the BD GeneOhm StaphSR assay for direct detection of methicillin-resistant and methicillin-susceptible Staphylococcus aureus isolates in positive blood cultures collected in the United States
    • Snyder JW, Munier GK, Heckman SA, Camp P, Overman TL. 2009. Failure of the BD GeneOhm StaphSR assay for direct detection of methicillin-resistant and methicillin-susceptible Staphylococcus aureus isolates in positive blood cultures collected in the United States. J. Clin. Microbiol. 47:3747–3748. http://dx.doi.org/10.1128/JCM.01391-09.
    • (2009) J. Clin. Microbiol , vol.47 , pp. 3747-3748
    • Snyder, J.W.1    Munier, G.K.2    Heckman, S.A.3    Camp, P.4    Overman, T.L.5
  • 77
    • 67349136840 scopus 로고    scopus 로고
    • Evaluation of the LightCycler SeptiFast test in the rapid etiologic diagnostic of infectious endocarditis
    • Casalta JP, Gouriet F, Roux V, Thuny F, Habib G, Raoult D. 2009. Evaluation of the LightCycler SeptiFast test in the rapid etiologic diagnostic of infectious endocarditis. Eur. J. Clin. Microbiol. Infect. Dis. 28: 569–573. http://dx.doi.org/10.1007/s10096-008-0672-6.
    • (2009) Eur. J. Clin. Microbiol. Infect. Dis , vol.28 , pp. 569-573
    • Casalta, J.P.1    Gouriet, F.2    Roux, V.3    Thuny, F.4    Habib, G.5    Raoult, D.6
  • 78
    • 34547622268 scopus 로고    scopus 로고
    • Clinical validation of the molecular BD GeneOhm StaphSR assay for direct detection of Staphylococcus aureus and methicillin-resistant Staphylococcus aureus in positive blood cultures
    • Stamper PD, Cai M, Howard T, Speser S, Carroll KC. 2007. Clinical validation of the molecular BD GeneOhm StaphSR assay for direct detection of Staphylococcus aureus and methicillin-resistant Staphylococcus aureus in positive blood cultures. J. Clin. Microbiol. 45:2191–2196. http://dx.doi.org/10.1128/JCM.00552-07.
    • (2007) J. Clin. Microbiol , vol.45 , pp. 2191-2196
    • Stamper, P.D.1    Cai, M.2    Howard, T.3    Speser, S.4    Carroll, K.C.5
  • 79
    • 66149150869 scopus 로고    scopus 로고
    • A common variant of staphylococcal cassette chromosome mec type IVa in isolates from Copenhagen, Denmark, is not detected by the BD GeneOhm methicillin-resistant Staphylococcus aureus assay
    • Bartels MD, Boye K, Rohde SM, Larsen AR, Torfs H, Bouchy P, Skov R, Westh H. 2009. A common variant of staphylococcal cassette chromosome mec type IVa in isolates from Copenhagen, Denmark, is not detected by the BD GeneOhm methicillin-resistant Staphylococcus aureus assay. J. Clin. Microbiol. 47:1524–1527. http://dx.doi.org/10.1128/JCM.02153-08.
    • (2009) J. Clin. Microbiol , vol.47 , pp. 1524-1527
    • Bartels, M.D.1    Boye, K.2    Rohde, S.M.3    Larsen, A.R.4    Torfs, H.5    Bouchy, P.6    Skov, R.7    Westh, H.8
  • 80
    • 57349195583 scopus 로고    scopus 로고
    • Failure of the BD GeneOhm StaphS/R assay for identification of Australian methicillin-resistant Staphylococcus aureus strains: Duplex assays as the “gold standard” in settings of unknown SCCmec epidemiology
    • Thomas L, van Hal S, O’Sullivan M, Kyme P, Iredell J. 2008. Failure of the BD GeneOhm StaphS/R assay for identification of Australian methicillin-resistant Staphylococcus aureus strains: duplex assays as the “gold standard” in settings of unknown SCCmec epidemiology. J. Clin. Microbiol. 46:4116–4117. http://dx.doi.org/10.1128/JCM.01146-08.
    • (2008) J. Clin. Microbiol , vol.46 , pp. 4116-4117
    • Thomas, L.1    Van Hal, S.2    O’sullivan, M.3    Kyme, P.4    Iredell, J.5
  • 81
    • 3943093972 scopus 로고    scopus 로고
    • Nosocomial bloodstream infections in US hospitals: Analysis of 24,179 cases from a prospective nationwide surveillance study
    • Wisplinghoff H, Bischoff T, Tallent SM, Seifert H, Wenzel RP, Ed-mond MB. 2004. Nosocomial bloodstream infections in US hospitals: analysis of 24,179 cases from a prospective nationwide surveillance study. Clin. Infect. Dis. 39:309–317. http://dx.doi.org/10.1086/421946.
    • (2004) Clin. Infect. Dis , vol.39 , pp. 309-317
    • Wisplinghoff, H.1    Bischoff, T.2    Tallent, S.M.3    Seifert, H.4    Wenzel, R.P.5    Ed-Mond, M.B.6
  • 83
    • 84882805507 scopus 로고    scopus 로고
    • Comparison of the FilmArray RP, Verigene RV+, and Prodesse ProFLU+/FAST+ multiplex platforms for detection of influenza viruses in clinical samples from the 2011-2012 influenza season in Belgium
    • Van Wesenbeeck L, Meeuws H, Van Immerseel A, Ispas G, Schmidt K, Houspie L, Van Ranst M, Stuyver L. 2013. Comparison of the FilmArray RP, Verigene RV+, and Prodesse ProFLU+/FAST+ multiplex platforms for detection of influenza viruses in clinical samples from the 2011-2012 influenza season in Belgium. J. Clin. Microbiol. 51:2977–2985. http://dx.doi.org/10.1128/JCM.00911-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 2977-2985
    • Van Wesenbeeck, L.1    Meeuws, H.2    Van Immerseel, A.3    Ispas, G.4    Schmidt, K.5    Houspie, L.6    Van Ranst, M.7    Stuyver, L.8
  • 84
    • 84856142045 scopus 로고    scopus 로고
    • Comparison of the Idaho Technology FilmArray system to real-time PCR for detection of respiratory pathogens in children
    • Pierce VM, Elkan M, Leet M, McGowan KL, Hodinka RL. 2012. Comparison of the Idaho Technology FilmArray system to real-time PCR for detection of respiratory pathogens in children. J. Clin. Microbiol. 50:364–371. http://dx.doi.org/10.1128/JCM.05996-11.
    • (2012) J. Clin. Microbiol , vol.50 , pp. 364-371
    • Pierce, V.M.1    Elkan, M.2    Leet, M.3    McGowan, K.L.4    Hodinka, R.L.5
  • 85
    • 84889825180 scopus 로고    scopus 로고
    • Clinical evaluation of the FilmArray blood culture identification panel in identification of bacteria and yeasts from positive blood culture bottles
    • Altun O, Almuhayawi M, Ullberg M, Ozenci V. 2013. Clinical evaluation of the FilmArray blood culture identification panel in identification of bacteria and yeasts from positive blood culture bottles. J. Clin. Microbiol. 51:4130–4136. http://dx.doi.org/10.1128/JCM.01835-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 4130-4136
    • Altun, O.1    Almuhayawi, M.2    Ullberg, M.3    Ozenci, V.4
  • 86
    • 84887360488 scopus 로고    scopus 로고
    • The FilmArray respiratory panel: An automated, broadly multiplexed molecular test for the rapid and accurate detection of respiratory pathogens
    • Babady NE. 2013. The FilmArray respiratory panel: an automated, broadly multiplexed molecular test for the rapid and accurate detection of respiratory pathogens. Expert Rev. Mol. Diagn. 13:779–788. http://dx.doi.org/10.1586/14737159.2013.848794.
    • (2013) Expert Rev. Mol. Diagn , vol.13 , pp. 779-788
    • Babady, N.E.1
  • 87
    • 84876771767 scopus 로고    scopus 로고
    • Comparison of the Biofire FilmArray RP, Genmark eSensor RVP, Luminex xTAG RVPv1, and Lu-minex xTAG RVP fast multiplex assays for detection of respiratory viruses
    • Popowitch EB, O’Neill SS, Miller MB. 2013. Comparison of the Biofire FilmArray RP, Genmark eSensor RVP, Luminex xTAG RVPv1, and Lu-minex xTAG RVP fast multiplex assays for detection of respiratory viruses. J. Clin. Microbiol. 51:1528–1533. http://dx.doi.org/10.1128/JCM.03368-12.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 1528-1533
    • Popowitch, E.B.1    O’neill, S.S.2    Miller, M.B.3
  • 89
    • 84889869327 scopus 로고    scopus 로고
    • Evaluation and implementation of FilmArray version 1.7 for improved detection of adenovi-rus respiratory tract infection
    • Doern CD, Lacey D, Huang R, Haag C. 2013. Evaluation and implementation of FilmArray version 1.7 for improved detection of adenovi-rus respiratory tract infection. J. Clin. Microbiol. 51:4036–4039. http://dx.doi.org/10.1128/JCM.02546-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 4036-4039
    • Doern, C.D.1    Lacey, D.2    Huang, R.3    Haag, C.4
  • 91
    • 77953534350 scopus 로고    scopus 로고
    • Trends in antimicrobial resistance of clinical isolates of Enterococcus faecalis and Enterococcus faecium in Greece between 2002 and 2007
    • Protonotariou E, Dimitroulia E, Pournaras S, Pitiriga V, Sofianou D, Tsakris A. 2010. Trends in antimicrobial resistance of clinical isolates of Enterococcus faecalis and Enterococcus faecium in Greece between 2002 and 2007. J. Hosp. Infect. 75:225–227. http://dx.doi.org/10.1016/j.jhin.2009.12.007.
    • (2010) J. Hosp. Infect , vol.75 , pp. 225-227
    • Protonotariou, E.1    Dimitroulia, E.2    Pournaras, S.3    Pitiriga, V.4    Sofianou, D.5    Tsakris, A.6
  • 92
    • 70449112966 scopus 로고    scopus 로고
    • Basic concepts of microarrays and potential applications in clinical microbiology
    • Miller MB, Tang YW. 2009. Basic concepts of microarrays and potential applications in clinical microbiology. Clin. Microbiol. Rev. 22:611–633. http://dx.doi.org/10.1128/CMR.00019-09.
    • (2009) Clin. Microbiol. Rev , vol.22 , pp. 611-633
    • Miller, M.B.1    Tang, Y.W.2
  • 93
    • 33747860281 scopus 로고    scopus 로고
    • Making and using spotted DNA microarrays in an academic core laboratory
    • Hager J. 2006. Making and using spotted DNA microarrays in an academic core laboratory. Methods Enzymol. 410:135–168. http://dx.doi.org/10.1016/S0076-6879(06)10007-5.
    • (2006) Methods Enzymol , vol.410 , pp. 135-168
    • Hager, J.1
  • 95
    • 84879451264 scopus 로고    scopus 로고
    • Evaluation of the Verigene Gram-positive blood culture nucleic acid test for rapid detection of bacteria and resistance determinants
    • Wojewoda CM, Sercia L, Navas M, Tuohy M, Wilson D, Hall GS, Procop GW, Richter SS. 2013. Evaluation of the Verigene Gram-positive blood culture nucleic acid test for rapid detection of bacteria and resistance determinants. J. Clin. Microbiol. 51:2072–2076. http://dx.doi.org/10.1128/JCM.00831-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 2072-2076
    • Wojewoda, C.M.1    Sercia, L.2    Navas, M.3    Tuohy, M.4    Wilson, D.5    Hall, G.S.6    Procop, G.W.7    Richter, S.S.8
  • 96
    • 84875827717 scopus 로고    scopus 로고
    • Evaluation of a microarray-based assay for rapid identification of Gram-positive organisms and resistance markers in positive blood cultures
    • Samuel LP, Tibbetts RJ, Agotesku A, Fey M, Hensley R, Meier FA. 2013. Evaluation of a microarray-based assay for rapid identification of Gram-positive organisms and resistance markers in positive blood cultures. J. Clin. Microbiol. 51:1188–1192. http://dx.doi.org/10.1128/JCM.02982-12.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 1188-1192
    • Samuel, L.P.1    Tibbetts, R.J.2    Agotesku, A.3    Fey, M.4    Hensley, R.5    Meier, F.A.6
  • 97
    • 84881261591 scopus 로고    scopus 로고
    • Multiplex identification of gram-positive bacteria and resistance determinants directly from positive blood culture broths: Evaluation of an automated microarray-based nucleic acid test
    • Buchan BW, Ginocchio CC, Manii R, Cavagnolo R, Pancholi P, Swyers L, Thomson RB, Jr., Anderson C, Kaul K, Ledeboer NA. 2013. Multiplex identification of gram-positive bacteria and resistance determinants directly from positive blood culture broths: evaluation of an automated microarray-based nucleic acid test. PLoS medicine. 10: e1001478. http://dx.doi.org/10.1371/journal.pmed.1001478.
    • (2013) PLoS medicine , pp. 10
    • Buchan, B.W.1    Ginocchio, C.C.2    Manii, R.3    Cavagnolo, R.4    Pancholi, P.5    Swyers, L.6    Thomson, R.B.7    Anderson, C.8    Kaul, K.9    Ledeboer, N.A.10
  • 98
    • 80053464779 scopus 로고    scopus 로고
    • Evaluation of a microarray-based genotyping assay for the rapid detection of cyto-chrome P450 2C19 *2 and *3 polymorphisms from whole blood using nanoparticle probes
    • Buchan BW, Peterson JF, Cogbill CH, Anderson DK, Ledford JS, White MN, Quigley NB, Jannetto PJ, Ledeboer NA. 2011. Evaluation of a microarray-based genotyping assay for the rapid detection of cyto-chrome P450 2C19 *2 and *3 polymorphisms from whole blood using nanoparticle probes. Am. J. Clin. Pathol. 136:604–608. http://dx.doi.org/10.1309/AJCPCPU9Q2IRNYXC.
    • (2011) Am. J. Clin. Pathol , vol.136 , pp. 604-608
    • Buchan, B.W.1    Peterson, J.F.2    Cogbill, C.H.3    Anderson, D.K.4    Ledford, J.S.5    White, M.N.6    Quigley, N.B.7    Jannetto, P.J.8    Ledeboer, N.A.9
  • 99
    • 70349238610 scopus 로고    scopus 로고
    • Evaluation of the Nano-sphere Verigene system and the Verigene F5/F2/MTHFR nucleic acid tests
    • Lefferts JA, Jannetto P, Tsongalis GJ. 2009. Evaluation of the Nano-sphere Verigene system and the Verigene F5/F2/MTHFR nucleic acid tests. Exp. Mol. Pathol. 87:105–108. http://dx.doi.org/10.1016/j.yexmp.2009.06.002.
    • (2009) Exp. Mol. Pathol , vol.87 , pp. 105-108
    • Lefferts, J.A.1    Jannetto, P.2    Tsongalis, G.J.3
  • 100
    • 78049514476 scopus 로고    scopus 로고
    • Real-time detection of influenza A, influenza B, and respiratory syncytial virus A and B in respiratory specimens by use of nanoparticle probes
    • Jannetto PJ, Buchan BW, Vaughan KA, Ledford JS, Anderson DK, Henley DC, Quigley NB, Ledeboer NA. 2010. Real-time detection of influenza A, influenza B, and respiratory syncytial virus A and B in respiratory specimens by use of nanoparticle probes. J. Clin. Microbiol. 48: 3997–4002. http://dx.doi.org/10.1128/JCM.01118-10.
    • (2010) J. Clin. Microbiol , vol.48 , pp. 3997-4002
    • Jannetto, P.J.1    Buchan, B.W.2    Vaughan, K.A.3    Ledford, J.S.4    Anderson, D.K.5    Henley, D.C.6    Quigley, N.B.7    Ledeboer, N.A.8
  • 101
    • 84903766746 scopus 로고    scopus 로고
    • Rapid detection of inpatient Gram-negative bacteremia; extended-spectrum beta-lactamases and carbapen-emase resistance determinants with the Verigene BC-GN test: A multi-center evaluation
    • April
    • Sullivan KV, Deburger B, Roundtree SS, Ventrola CA, Blecker-Shelly DL, Mortensen JE. 23 April 2014. Rapid detection of inpatient Gram-negative bacteremia; extended-spectrum beta-lactamases and carbapen-emase resistance determinants with the Verigene BC-GN test: a multi-center evaluation. J. Clin. Microbiol. http://dx.doi.org/10.1128/JCM.00737-14.
    • (2014) J. Clin. Microbiol , vol.23
    • Sullivan, K.V.1    Deburger, B.2    Roundtree, S.S.3    Ventrola, C.A.4    Blecker-Shelly, D.L.5    Mortensen, J.E.6
  • 103
    • 84871683300 scopus 로고    scopus 로고
    • Comparative evaluation of the Nanosphere Verigene RV+ assay and the Simplexa Flu A/B & RSV kit for detection of influenza and respiratory syncytial viruses
    • Alby K, Popowitch EB, Miller MB. 2013. Comparative evaluation of the Nanosphere Verigene RV+ assay and the Simplexa Flu A/B & RSV kit for detection of influenza and respiratory syncytial viruses. J. Clin. Microbiol. 51:352–353. http://dx.doi.org/10.1128/JCM.02504-12.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 352-353
    • Alby, K.1    Popowitch, E.B.2    Miller, M.B.3
  • 104
    • 84880712524 scopus 로고    scopus 로고
    • Near point-of-care administration by the attending physician of the rapid influenza antigen detection immu-nochromatography test and the fully automated respiratory virus nucleic acid test: Contribution to patient management
    • Boku S, Naito T, Murai K, Tanei M, Inui A, Nisimura H, Isonuma H, Takahashi H, Kikuchi K. 2013. Near point-of-care administration by the attending physician of the rapid influenza antigen detection immu-nochromatography test and the fully automated respiratory virus nucleic acid test: contribution to patient management. Diagn. Microbiol. Infect. Dis. 76:445–449. http://dx.doi.org/10.1016/j.diagmicrobio.2013.04.029.
    • (2013) Diagn. Microbiol. InfectDis , vol.76 , pp. 445-449
    • Boku, S.1    Naito, T.2    Murai, K.3    Tanei, M.4    Inui, A.5    Nisimura, H.6    Isonuma, H.7    Takahashi, H.8    Kikuchi, K.9
  • 105
    • 25144469664 scopus 로고    scopus 로고
    • Toxin production by an emerging strain of Clostridium difficile associated with outbreaks of severe disease in North America and Europe
    • Warny M, Pepin J, Fang A, Killgore G, Thompson A, Brazier J, Frost E, McDonald LC. 2005. Toxin production by an emerging strain of Clostridium difficile associated with outbreaks of severe disease in North America and Europe. Lancet 366:1079–1084. http://dx.doi.org/10.1016/S0140-6736(05)67420-X.
    • (2005) Lancet , vol.366 , pp. 1079-1084
    • Warny, M.1    Pepin, J.2    Fang, A.3    Killgore, G.4    Thompson, A.5    Brazier, J.6    Frost, E.7    McDonald, L.C.8
  • 107
    • 84891519991 scopus 로고    scopus 로고
    • Performance of the Verigene gram-positive blood culture assay for direct detection of Gram-positive organisms and resistance markers in a pediatric hospital
    • Mestas J, Polanco CM, Felsenstein S, Dien Bard J. 2014. Performance of the Verigene gram-positive blood culture assay for direct detection of Gram-positive organisms and resistance markers in a pediatric hospital. J. Clin. Microbiol. 52:283–287. http://dx.doi.org/10.1128/JCM.02322-13.
    • (2014) J. Clin. Microbiol , vol.52 , pp. 283-287
    • Mestas, J.1    Polanco, C.M.2    Felsenstein, S.3    Dien Bard, J.4
  • 108
    • 84889772085 scopus 로고    scopus 로고
    • Evaluation of the nanosphere verigene gram-positive blood culture assay with the VersaTREK blood culture system and assessment of possible impact on selected patients
    • Beal SG, Ciurca J, Smith G, John J, Lee F, Doern CD, Gander RM. 2013. Evaluation of the nanosphere verigene gram-positive blood culture assay with the VersaTREK blood culture system and assessment of possible impact on selected patients. J. Clin. Microbiol. 51:3988–3992. http://dx.doi.org/10.1128/JCM.01889-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 3988-3992
    • Beal, S.G.1    Ciurca, J.2    Smith, G.3    John, J.4    Lee, F.5    Doern, C.D.6    Gander, R.M.7
  • 109
    • 84886533886 scopus 로고    scopus 로고
    • Rapid detection of Gram-positive organisms by use of the Verigene Gram-positive blood culture nucleic acid test and the BacT/Alert Pediatric FAN system in a multicenter pediatric evaluation
    • Sullivan KV, Turner NN, Roundtree SS, Young S, Brock-Haag CA, Lacey D, Abuzaid S, Blecker-Shelly DL, Doern CD. 2013. Rapid detection of Gram-positive organisms by use of the Verigene Gram-positive blood culture nucleic acid test and the BacT/Alert Pediatric FAN system in a multicenter pediatric evaluation. J. Clin. Microbiol. 51:3579–3584. http://dx.doi.org/10.1128/JCM.01224-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 3579-3584
    • Sullivan, K.V.1    Turner, N.N.2    Roundtree, S.S.3    Young, S.4    Brock-Haag, C.A.5    Lacey, D.6    Abuzaid, S.7    Blecker-Shelly, D.L.8    Doern, C.D.9
  • 110
    • 37349033245 scopus 로고    scopus 로고
    • Principles of the xTAG respiratory viral panel assay (RVP Assay)
    • Merante F, Yaghoubian S, Janeczko R. 2007. Principles of the xTAG respiratory viral panel assay (RVP Assay). J. Clin. Virol. 40(Suppl 1):S31-S35. http://dx.doi.org/10.1016/S1386-6532(07)70007-0.
    • (2007) J. Clin. Virol , vol.40 , pp. S31-S35
    • Merante, F.1    Yaghoubian, S.2    Janeczko, R.3
  • 111
    • 84880654458 scopus 로고    scopus 로고
    • Performance of the xTAG(R) gastrointestinal pathogen panel, a multiplex molecular assay for simultaneous detection of bacterial, viral, and parasitic causes of infectious gastroenteritis
    • Claas EC, Burnham CA, Mazzulli T, Templeton K, Topin F. 2013. Performance of the xTAG(R) gastrointestinal pathogen panel, a multiplex molecular assay for simultaneous detection of bacterial, viral, and parasitic causes of infectious gastroenteritis. J. Microbiol. Biotechnol. 23:1041–1045. http://dx.doi.org/10.4014/jmb.1212.12042.
    • (2013) J. Microbiol. Biotechnol , vol.23 , pp. 1041-1045
    • Claas, E.C.1    Burnham, C.A.2    Mazzulli, T.3    Templeton, K.4    Topin, F.5
  • 113
    • 53649094726 scopus 로고    scopus 로고
    • Comparison of the Luminex xTAG respiratory viral panel with in-house nucleic acid amplification tests for diagnosis of respiratory virus infections
    • Pabbaraju K, Tokaryk KL, Wong S, Fox JD. 2008. Comparison of the Luminex xTAG respiratory viral panel with in-house nucleic acid amplification tests for diagnosis of respiratory virus infections. J. Clin. Microbiol. 46:3056–3062. http://dx.doi.org/10.1128/JCM.00878-08.
    • (2008) J. Clin. Microbiol , vol.46 , pp. 3056-3062
    • Pabbaraju, K.1    Tokaryk, K.L.2    Wong, S.3    Fox, J.D.4
  • 114
    • 84878235941 scopus 로고    scopus 로고
    • Comparison of four multiplex PCR assays for the detection of viral pathogens in respiratory specimens
    • Anderson TP, Werno AM, Barratt K, Mahagamasekera P, Murdoch DR, Jennings LC. 2013. Comparison of four multiplex PCR assays for the detection of viral pathogens in respiratory specimens. J. Virol. Methods 191:118–121. http://dx.doi.org/10.1016/j.jviromet.2013.04.005.
    • (2013) J. Virol. Methods , vol.191 , pp. 118-121
    • Anderson, T.P.1    Werno, A.M.2    Barratt, K.3    Mahagamasekera, P.4    Murdoch, D.R.5    Jennings, L.C.6
  • 115
    • 16644379918 scopus 로고    scopus 로고
    • Adenovirus
    • Anonymous. 2004. Adenovirus. Am. J. Transplant. 4(Suppl 10):101-104. http://dx.doi.org/10.1111/j.1600-6135.2004.00733.x.
    • (2004) Am. J. Transplant , vol.4 , pp. 101-104
  • 116
    • 0032574193 scopus 로고    scopus 로고
    • Primary symptomless colonisation by Clostridium difficile and decreased risk of subsequent diarrhoea
    • Shim JK, Johnson S, Samore MH, Bliss DZ, Gerding DN. 1998. Primary symptomless colonisation by Clostridium difficile and decreased risk of subsequent diarrhoea. Lancet 351:633–636. http://dx.doi.org/10.1016/S0140-6736(97)08062-8.
    • (1998) Lancet , vol.351 , pp. 633-636
    • Shim, J.K.1    Johnson, S.2    Samore, M.H.3    Bliss, D.Z.4    Gerding, D.N.5
  • 117
    • 84903950312 scopus 로고    scopus 로고
    • Prevalence and risk factors for asymptomatic Clostridium difficile carriage
    • Alasmari F, Seiler SM, Hink T, Burnham CA, Dubberke ER. 2014. Prevalence and risk factors for asymptomatic Clostridium difficile carriage. Clin. Infect. Dis. 59:216–222. http://dx.doi.org/10.1093/cid/ciu258.
    • (2014) Clin. Infect. Dis , vol.59 , pp. 216-222
    • Alasmari, F.1    Seiler, S.M.2    Hink, T.3    Burnham, C.A.4    Dubberke, E.R.5
  • 118
    • 33748072755 scopus 로고    scopus 로고
    • Impact of rapid in situ hybridization testing on coagulase-negative staphylococci positive blood cultures
    • Forrest GN, Mehta S, Weekes E, Lincalis DP, Johnson JK, Venezia RA. 2006. Impact of rapid in situ hybridization testing on coagulase-negative staphylococci positive blood cultures. J. Antimicrob. Chemother. 58: 154–158. http://dx.doi.org/10.1093/jac/dkl146.
    • (2006) J. Antimicrob. Chemother , vol.58 , pp. 154-158
    • Forrest, G.N.1    Mehta, S.2    Weekes, E.3    Lincalis, D.P.4    Johnson, J.K.5    Venezia, R.A.6
  • 119
    • 33748791771 scopus 로고    scopus 로고
    • Peptide nucleic acid fluorescence in situ hybridization-based identification of Candida albicans and its impact on mortality and antifungal therapy costs
    • Forrest GN, Mankes K, Jabra-Rizk MA, Weekes E, Johnson JK, Lin-calis DP, Venezia RA. 2006. Peptide nucleic acid fluorescence in situ hybridization-based identification of Candida albicans and its impact on mortality and antifungal therapy costs. J. Clin. Microbiol. 44:3381–3383. http://dx.doi.org/10.1128/JCM.00751-06.
    • (2006) J. Clin. Microbiol , vol.44 , pp. 3381-3383
    • Forrest, G.N.1    Mankes, K.2    Jabra-Rizk, M.A.3    Weekes, E.4    Johnson, J.K.5    Lin-Calis, D.P.6    Venezia, R.A.7
  • 120
    • 54049122639 scopus 로고    scopus 로고
    • Peptide nucleic acid fluorescent in situ hybridization for hospital-acquired enterococcal bacteremia: Delivering earlier effective antimicrobial therapy
    • Forrest GN, Roghmann MC, Toombs LS, Johnson JK, Weekes E, Lincalis DP, Venezia RA. 2008. Peptide nucleic acid fluorescent in situ hybridization for hospital-acquired enterococcal bacteremia: delivering earlier effective antimicrobial therapy. Antimicrob. Agents Chemother. 52:3558–3563. http://dx.doi.org/10.1128/AAC.00283-08.
    • (2008) Antimicrob. Agents Chemother , vol.52 , pp. 3558-3563
    • Forrest, G.N.1    Roghmann, M.C.2    Toombs, L.S.3    Johnson, J.K.4    Weekes, E.5    Lincalis, D.P.6    Venezia, R.A.7
  • 121
    • 0032795495 scopus 로고    scopus 로고
    • Cytomegalovirus (CMV) DNA load is anindependent predictor of CMV disease and survival in advanced AIDS
    • Spector SA, Hsia K, Crager M, Pilcher M, Cabral S, Stempien MJ. 1999. Cytomegalovirus (CMV) DNA load is anindependent predictor of CMV disease and survival in advanced AIDS. J. Virol. 73:7027–7030.
    • (1999) J. Virol , vol.73 , pp. 7027-7030
    • Spector, S.A.1    Hsia, K.2    Crager, M.3    Pilcher, M.4    Cabral, S.5    Stempien, M.J.6
  • 122
    • 0034631463 scopus 로고    scopus 로고
    • Application of viral-load kinetics to identify patients who develop cytomegalovirus disease after transplantation
    • Emery VC, Sabin CA, Cope AV, Gor D, Hassan-Walker AF, Griffiths PD. 2000. Application of viral-load kinetics to identify patients who develop cytomegalovirus disease after transplantation. Lancet 355:2032–2036. http://dx.doi.org/10.1016/S0140-6736(00)02350-3.
    • (2000) Lancet , vol.355 , pp. 2032-2036
    • Emery, V.C.1    Sabin, C.A.2    Cope, A.V.3    Gor, D.4    Hassan-Walker, A.F.5    Griffiths, P.D.6
  • 123
    • 8644230860 scopus 로고    scopus 로고
    • Association between a high BK virus load in urine samples of patients with graft-versus-host disease and development of hemorrhagic cystitis after hematopoietic stem cell transplantation
    • Bogdanovic G, Priftakis P, Giraud G, Kuzniar M, Ferraldeschi R, Kokhaei P, Mellstedt H, Remberger M, Ljungman P, Winiarski J, Dalianis T. 2004. Association between a high BK virus load in urine samples of patients with graft-versus-host disease and development of hemorrhagic cystitis after hematopoietic stem cell transplantation. J. Clin. Microbiol. 42:5394–5396. http://dx.doi.org/10.1128/JCM.42.11.5394-5396.2004.
    • (2004) J. Clin. Microbiol , vol.42 , pp. 5394-5396
    • Bogdanovic, G.1    Priftakis, P.2    Giraud, G.3    Kuzniar, M.4    Ferraldeschi, R.5    Kokhaei, P.6    Mellstedt, H.7    Remberger, M.8    Ljungman, P.9    Winiarski, J.10    Dalianis, T.11
  • 124
    • 23044455335 scopus 로고    scopus 로고
    • BK DNA viral load in plasma: Evidence for an association with hemorrhagic cystitis in allogeneic hematopoietic cell transplant recipients
    • Erard V, Kim HW, Corey L, Limaye A, Huang ML, Myerson D, Davis C, Boeckh M. 2005. BK DNA viral load in plasma: evidence for an association with hemorrhagic cystitis in allogeneic hematopoietic cell transplant recipients. Blood 106:1130–1132. http://dx.doi.org/10.1182/blood-2004-12-4988.
    • (2005) Blood , vol.106 , pp. 1130-1132
    • Erard, V.1    Kim, H.W.2    Corey, L.3    Limaye, A.4    Huang, M.L.5    Myerson, D.6    Davis, C.7    Boeckh, M.8
  • 125
    • 67650105676 scopus 로고    scopus 로고
    • Clinical prognostic value ofRNA viral load and CD4 cell counts during untreated HIV-1 infection—a quantitative review
    • Korenromp EL, Williams BG, Schmid GP, Dye C. 2009. Clinical prognostic value ofRNA viral load and CD4 cell counts during untreated HIV-1 infection—a quantitative review. PLoS One 4:e5950. http://dx.doi.org/10.1371/journal.pone.0005950.
    • (2009) PLoS One , vol.4
    • Korenromp, E.L.1    Williams, B.G.2    Schmid, G.P.3    Dye, C.4
  • 126
    • 84865183909 scopus 로고    scopus 로고
    • Chromosomally integrated human herpesvirus-6 in transplant recipients
    • Lee SO, Brown RA, Razonable RR. 2012. Chromosomally integrated human herpesvirus-6 in transplant recipients. Transplant Infect. Dis. 14:346–354. http://dx.doi.org/10.1111/j.1399-3062.2011.00715.x.
    • (2012) Transplant Infect. Dis , vol.14 , pp. 346-354
    • Lee, S.O.1    Brown, R.A.2    Razonable, R.R.3
  • 129
    • 41649114164 scopus 로고    scopus 로고
    • Enabling personalized cancer medicine through analysis of gene-expression patterns
    • Van’t Veer LJ, Bernards R. 2008. Enabling personalized cancer medicine through analysis of gene-expression patterns. Nature 452:564–570. http://dx.doi.org/10.1038/nature06915.
    • (2008) Nature , vol.452 , pp. 564-570
    • Van’T Veer, L.J.1    Bernards, R.2
  • 131
    • 24944534978 scopus 로고    scopus 로고
    • Real-time PCR for mRNA quantitation
    • Wong ML, Medrano JF. 2005. Real-time PCR for mRNA quantitation. Biotechniques 39:75–85. http://dx.doi.org/10.2144/05391RV01.
    • (2005) Biotechniques , vol.39 , pp. 75-85
    • Wong, M.L.1    Medrano, J.F.2
  • 133
    • 2442622585 scopus 로고    scopus 로고
    • Quantitative biomarker analysis of synovial gene expression by real-time PCR
    • Boyle DL, Rosengren S, Bugbee W, Kavanaugh A, Firestein GS. 2003. Quantitative biomarker analysis of synovial gene expression by real-time PCR. Arthritis Res. Ther. 5:R352–R360. http://dx.doi.org/10.1186/ar1004.
    • (2003) Arthritis Res. Ther , vol.5 , pp. R352-R360
    • Boyle, D.L.1    Rosengren, S.2    Bugbee, W.3    Kavanaugh, A.4    Firestein, G.S.5
  • 134
    • 0038506857 scopus 로고    scopus 로고
    • Evaluation of real-time PCR versus PCR with liquid-phase hybridization for detection of enterovirus RNA in cerebrospinal fluid
    • Lai KK, Cook L, Wendt S, Corey L, Jerome KR. 2003. Evaluation of real-time PCR versus PCR with liquid-phase hybridization for detection of enterovirus RNA in cerebrospinal fluid. J. Clin. Microbiol. 41:3133–3141. http://dx.doi.org/10.1128/JCM.41.7.3133-3141.2003.
    • (2003) J. Clin. Microbiol , vol.41 , pp. 3133-3141
    • Lai, K.K.1    Cook, L.2    Wendt, S.3    Corey, L.4    Jerome, K.R.5
  • 136
    • 84870758826 scopus 로고    scopus 로고
    • Viral diagnostics in the era of digital polymerase chain reaction
    • Sedlak RH, Jerome KR. 2013. Viral diagnostics in the era of digital polymerase chain reaction. Diagn. Microbiol. Infect. Dis. 75:1–4. http://dx.doi.org/10.1016/j.diagmicrobio.2012.10.009.
    • (2013) Diagn. Microbiol. Infect. Dis , vol.75 , pp. 1-4
    • Sedlak, R.H.1    Jerome, K.R.2
  • 137
    • 84861960860 scopus 로고    scopus 로고
    • Digital PCR hits its stride
    • Baker M. 2012. Digital PCR hits its stride. Nat. Methods 9:541–544. http://dx.doi.org/10.1038/nmeth.2027.
    • (2012) Nat. Methods , vol.9 , pp. 541-544
    • Baker, M.1
  • 140
    • 84887629698 scopus 로고    scopus 로고
    • Quantification of plasma miRNAs by digital PCR for cancer diagnosis
    • Ma J, Li N, Guarnera M, Jiang F. 2013. Quantification of plasma miRNAs by digital PCR for cancer diagnosis. Biomarker Insights 8:127–136. http://dx.doi.org/10.4137/BMI.S13154.
    • (2013) Biomarker Insights , vol.8 , pp. 127-136
    • Ma, J.1    Li, N.2    Guarnera, M.3    Jiang, F.4
  • 141
    • 28544446695 scopus 로고    scopus 로고
    • Biomarkers in cancer staging, prognosis and treatment selection
    • Ludwig JA, Weinstein JN. 2005. Biomarkers in cancer staging, prognosis and treatment selection. Nat. Rev. Cancer 5:845–856. http://dx.doi.org/10.1038/nrc1739.
    • (2005) Nat. Rev. Cancer , vol.5 , pp. 845-856
    • Ludwig, J.A.1    Weinstein, J.N.2
  • 142
    • 41649102043 scopus 로고    scopus 로고
    • The cancer biomarker problem
    • Sawyers CL. 2008. The cancer biomarker problem. Nature 452:548–552. http://dx.doi.org/10.1038/nature06913.
    • (2008) Nature , vol.452 , pp. 548-552
    • Sawyers, C.L.1
  • 144
    • 84879429277 scopus 로고    scopus 로고
    • Detection of methicillin-resistant Staphylococcus aureus by a duplex droplet digital PCR assay
    • Kelley K, Cosman A, Belgrader P, Chapman B, Sullivan DC. 2013. Detection of methicillin-resistant Staphylococcus aureus by a duplex droplet digital PCR assay. J. Clin. Microbiol. 51:2033–2039. http://dx.doi.org/10.1128/JCM.00196-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 2033-2039
    • Kelley, K.1    Cosman, A.2    Belgrader, P.3    Chapman, B.4    Sullivan, D.C.5
  • 147
    • 80155186117 scopus 로고    scopus 로고
    • Multiplexed quantification of nucleic acids with large dynamic range using multivolume digital RT-PCR on a rotational SlipChip tested with HIV and hepatitis C viral load
    • Shen F, Sun B, Kreutz JE, Davydova EK, Du W, Reddy PL, Joseph LJ, Ismagilov RF. 2011. Multiplexed quantification of nucleic acids with large dynamic range using multivolume digital RT-PCR on a rotational SlipChip tested with HIV and hepatitis C viral load. J. Am. Chem. Soc. 133:17705–17712. http://dx.doi.org/10.1021/ja2060116.
    • (2011) J. Am. Chem. Soc , vol.133 , pp. 17705-17712
    • Shen, F.1    Sun, B.2    Kreutz, J.E.3    Davydova, E.K.4    Du, W.5    Reddy, P.L.6    Joseph, L.J.7    Ismagilov, R.F.8
  • 148
    • 84898984300 scopus 로고    scopus 로고
    • Identification of chromosomally integrated human herpesvirus 6 by droplet digital PCR
    • Sedlak RH, Cook L, Huang ML, Magaret A, Zerr DM, Boeckh M, Jerome KR. 2014. Identification of chromosomally integrated human herpesvirus 6 by droplet digital PCR. Clin. Chem. 60:765–772. http://dx.doi.org/10.1373/clinchem.2013.217240.
    • (2014) Clin. Chem , vol.60 , pp. 765-772
    • Sedlak, R.H.1    Cook, L.2    Huang, M.L.3    Magaret, A.4    Zerr, D.M.5    Boeckh, M.6    Jerome, K.R.7
  • 151
    • 0023548685 scopus 로고
    • Enzymatic method for continuous monitoring of DNA polymerase activity
    • Nyren P. 1987. Enzymatic method for continuous monitoring of DNA polymerase activity. Anal. Biochem. 167:235–238. http://dx.doi.org/10.1016/0003-2697(87)90158-8.
    • (1987) Anal. Biochem , vol.167 , pp. 235-238
    • Nyren, P.1
  • 152
    • 0023715281 scopus 로고
    • A new method of sequencing DNA
    • Hyman ED. 1988. A new method of sequencing DNA. Anal. Biochem. 174:423–436. http://dx.doi.org/10.1016/0003-2697(88)90041-3.
    • (1988) Anal. Biochem , vol.174 , pp. 423-436
    • Hyman, E.D.1
  • 153
    • 0030298490 scopus 로고    scopus 로고
    • Real-time DNA sequencing using detection of pyrophosphate release
    • Ronaghi M, Karamohamed S, Pettersson B, Uhlen M, Nyren P. 1996. Real-time DNA sequencing using detection of pyrophosphate release. Anal. Biochem. 242:84–89. http://dx.doi.org/10.1006/abio.1996.0432.
    • (1996) Anal. Biochem , vol.242 , pp. 84-89
    • Ronaghi, M.1    Karamohamed, S.2    Pettersson, B.3    Uhlen, M.4    Nyren, P.5
  • 155
    • 33947228403 scopus 로고    scopus 로고
    • Analysis of read length limiting factors in pyrosequencing chemistry
    • Mashayekhi F, Ronaghi M. 2007. Analysis of read length limiting factors in pyrosequencing chemistry. Anal. Biochem. 363:275–287. http://dx.doi.org/10.1016/j.ab.2007.02.002.
    • (2007) Anal. Biochem , vol.363 , pp. 275-287
    • Mashayekhi, F.1    Ronaghi, M.2
  • 156
    • 34948842866 scopus 로고    scopus 로고
    • Accuracy and quality of massively parallel DNA pyrosequencing
    • Huse SM, Huber JA, Morrison HG, Sogin ML, Welch DM. 2007. Accuracy and quality of massively parallel DNA pyrosequencing. Genome Biol. 8:R143. http://dx.doi.org/10.1186/gb-2007-8-7-r143.
    • (2007) Genome Biol , vol.8 , pp. R143
    • Huse, S.M.1    Huber, J.A.2    Morrison, H.G.3    Sogin, M.L.4    Welch, D.M.5
  • 159
    • 79951568734 scopus 로고    scopus 로고
    • Making contact with sequencing’s fourth generation
    • Perkel J. 2011. Making contact with sequencing’s fourth generation. Biotechniques 50:93–95. http://dx.doi.org/10.2144/000113608.
    • (2011) Biotechniques , vol.50 , pp. 93-95
    • Perkel, J.1
  • 160
    • 84876933570 scopus 로고    scopus 로고
    • Shining a light on dark sequencing: Characterising errors in ion torrent PGM data. PLoS Comput
    • Bragg LM, Stone G, Butler MK, Hugenholtz P, Tyson GW. 2013. Shining a light on dark sequencing: characterising errors in ion torrent PGM data. PLoS Comput. Biol. 9:e1003031. http://dx.doi.org/10.1371/journal.pcbi.1003031.
    • (2013) Biol , vol.9
    • Bragg, L.M.1    Stone, G.2    Butler, M.K.3    Hugenholtz, P.4    Tyson, G.W.5
  • 161
    • 79955539272 scopus 로고    scopus 로고
    • Molecular detection of mutations associated with first- and second-line drug resistance compared with conventional drug susceptibility testing of Myco-bacterium tuberculosis
    • Campbell PJ, Morlock GP, Sikes RD, Dalton TL, Metchock B, Starks AM, Hooks DP, Cowan LS, Plikaytis BB, Posey JE. 2011. Molecular detection of mutations associated with first- and second-line drug resistance compared with conventional drug susceptibility testing of Myco-bacterium tuberculosis. Antimicrob. Agents Chemother. 55:2032–2041. http://dx.doi.org/10.1128/AAC.01550-10.
    • (2011) Antimicrob. Agents Chemother , vol.55 , pp. 2032-2041
    • Campbell, P.J.1    Morlock, G.P.2    Sikes, R.D.3    Dalton, T.L.4    Metchock, B.5    Starks, A.M.6    Hooks, D.P.7    Cowan, L.S.8    Plikaytis, B.B.9    Posey, J.E.10
  • 164
    • 33745165269 scopus 로고    scopus 로고
    • Rapid detection of rifampin resistance in Mycobacterium tuberculosis by pyrosequencing technology
    • Jureen P, Engstrand L, Eriksson S, Alderborn A, Krabbe M, Hoffner SE. 2006. Rapid detection of rifampin resistance in Mycobacterium tuberculosis by pyrosequencing technology. J. Clin. Microbiol. 44:1925–1929. http://dx.doi.org/10.1128/JCM.02210-05.
    • (2006) J. Clin. Microbiol , vol.44 , pp. 1925-1929
    • Jureen, P.1    Engstrand, L.2    Eriksson, S.3    Alderborn, A.4    Krabbe, M.5    Hoffner, S.E.6
  • 167
    • 84876764053 scopus 로고    scopus 로고
    • Outbreak investigation using high-throughput genome sequencing within a diagnostic microbiology laboratory
    • Sherry NL, Porter JL, Seemann T, Watkins A, Stinear TP, Howden BP. 2013. Outbreak investigation using high-throughput genome sequencing within a diagnostic microbiology laboratory. J. Clin. Microbiol. 51: 1396–1401. http://dx.doi.org/10.1128/JCM.03332-12.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 1396-1401
    • Sherry, N.L.1    Porter, J.L.2    Seemann, T.3    Watkins, A.4    Stinear, T.P.5    Howden, B.P.6
  • 170
    • 84875507913 scopus 로고    scopus 로고
    • Rapid deep sequencing of patient-derived HIV with ion semiconductor technology
    • Chang MW, Oliveira G, Yuan J, Okulicz JF, Levy S, Torbett BE. 2013. Rapid deep sequencing of patient-derived HIV with ion semiconductor technology. J. Virol. Methods 189:232–234. http://dx.doi.org/10.1016/j.jviromet.2013.01.019.
    • (2013) J. Virol. Methods , vol.189 , pp. 232-234
    • Chang, M.W.1    Oliveira, G.2    Yuan, J.3    Okulicz, J.F.4    Levy, S.5    Torbett, B.E.6
  • 175
    • 84893813110 scopus 로고    scopus 로고
    • Deficiency in expression and epigenetic DNA Methylationof ASS1 geneinnasopha-ryngeal carcinoma: Negative prognostic impact and therapeutic relevance
    • Lan J, Tai HC, Lee SW, Chen TJ, Huang HY, Li CF. 2014. Deficiency in expression and epigenetic DNA Methylationof ASS1 geneinnasopha-ryngeal carcinoma: negative prognostic impact and therapeutic relevance. Tumour Biol. 35:161–169. http://dx.doi.org/10.1007/s13277-013 -1020-8.
    • (2014) Tumour Biol , vol.35 , pp. 161-169
    • Lan, J.1    Tai, H.C.2    Lee, S.W.3    Chen, T.J.4    Huang, H.Y.5    Li, C.F.6
  • 176
    • 84887929046 scopus 로고    scopus 로고
    • Genes with aberrant expression in murine preneoplastic intestine show epigenetic and expression changes in normal mucosa of colon cancer patients
    • Leclerc D, Levesque N, Cao Y, Deng L, Wu Q., Powell J, Sapienza C, Rozen R. 2013. Genes with aberrant expression in murine preneoplastic intestine show epigenetic and expression changes in normal mucosa of colon cancer patients. Cancer Prev. Res. 6:1171–1181. http://dx.doi.org/10.1158/1940-6207.CAPR-13-0198.
    • (2013) Cancer Prev. Res , vol.6 , pp. 1171-1181
    • Leclerc, D.1    Levesque, N.2    Cao, Y.3    Deng, L.4    Wu, Q.5    Powell, J.6    Sapienza, C.7    Rozen, R.8
  • 178
    • 64149123778 scopus 로고    scopus 로고
    • Next-generation sequencing: From basic research to diagnostics
    • Voelkerding KV, Dames SA, Durtschi JD. 2009. Next-generation sequencing: from basic research to diagnostics. Clin. Chem. 55:641–658. http://dx.doi.org/10.1373/clinchem.2008.112789.
    • (2009) Clin. Chem , vol.55 , pp. 641-658
    • Voelkerding, K.V.1    Dames, S.A.2    Durtschi, J.D.3
  • 179
    • 0042261796 scopus 로고    scopus 로고
    • Tandem mass spectrometry in the clinical chemistry laboratory
    • Dooley KC. 2003. Tandem mass spectrometry in the clinical chemistry laboratory. Clin. Biochem. 36:471–481. http://dx.doi.org/10.1016/S0009 -9120(03)00105-X.
    • (2003) Clin. Biochem , vol.36 , pp. 471-481
    • Dooley, K.C.1
  • 180
    • 73949146997 scopus 로고    scopus 로고
    • Mass spectrometry tools for the classification and identification of bacteria
    • Sauer S, Kliem M. 2010. Mass spectrometry tools for the classification and identification of bacteria. Nat. Rev. Microbiol. 8:74–82. http://dx.doi.org/10.1038/nrmicro2243.
    • (2010) Nat. Rev. Microbiol , vol.8 , pp. 74-82
    • Sauer, S.1    Kliem, M.2
  • 181
    • 67651173106 scopus 로고    scopus 로고
    • Proteomics by mass spectrom-etry: Approaches, advances, and applications
    • Yates JR, Ruse CI, Nakorchevsky A. 2009. Proteomics by mass spectrom-etry: approaches, advances, and applications. Annu. Rev. Biomed. Eng. 11: 49–79. http://dx.doi.org/10.1146/annurev-bioeng-061008-124934.
    • (2009) Annu. Rev. Biomed. Eng , vol.11 , pp. 49-79
    • Yates, J.R.1    Ruse, C.I.2    Nakorchevsky, A.3
  • 182
    • 79953834934 scopus 로고    scopus 로고
    • Intact cell MALDI-TOF mass spectrometry-based approaches for the diagnosis of bloodstream infections
    • La Scola B. 2011. Intact cell MALDI-TOF mass spectrometry-based approaches for the diagnosis of bloodstream infections. Expert Rev. Mol. Diagn. 11:287–298.
    • (2011) Expert Rev. Mol. Diagn , vol.11 , pp. 287-298
    • La Scola, B.1
  • 183
    • 77950462078 scopus 로고    scopus 로고
    • Comparison of two matrix-assisted laser desorption ionization–time of flight mass spectrometry methods with conventional phenotypic identification for routine identification of bacteria to the species level
    • Cherkaoui A, Hibbs J, Emonet S, Tangomo M, Girard M, Francois P, Schrenzel J. 2010. Comparison of two matrix-assisted laser desorption ionization–time of flight mass spectrometry methods with conventional phenotypic identification for routine identification of bacteria to the species level. J. Clin. Microbiol. 48:1169–1175. http://dx.doi.org/10.1128/JCM.01881-09.
    • (2010) J. Clin. Microbiol , vol.48 , pp. 1169-1175
    • Cherkaoui, A.1    Hibbs, J.2    Emonet, S.3    Tangomo, M.4    Girard, M.5    Francois, P.6    Schrenzel, J.7
  • 184
    • 84875164327 scopus 로고    scopus 로고
    • Comparison of two matrixassisted laser desorption/ionization-time of flight (MALDI-TOF) mass spectrometry methods and API 20AN for identification of clinically relevant anaerobic bacteria
    • Jamal WY, Shahin M, Rotimi VO. 2013. Comparison of two matrixassisted laser desorption/ionization-time of flight (MALDI-TOF) mass spectrometry methods and API 20AN for identification of clinically relevant anaerobic bacteria. J. Med. Microbiol. 62:540–544. http://dx.doi.org/10.1099/jmm.0.053256-0.
    • (2013) J. Med. Microbiol , vol.62 , pp. 540-544
    • Jamal, W.Y.1    Shahin, M.2    Rotimi, V.O.3
  • 185
    • 84862071299 scopus 로고    scopus 로고
    • Evaluation of the Bruker Biotyper and Vitek MS matrix-assisted laser desorption ionization–time of flight mass spec-trometry systems for identification of nonfermenting Gram-negative bacilli isolated from cultures from cystic fibrosis patients
    • Marko DC, Saffert RT, Cunningham SA, Hyman J, Walsh J, Arbefe-ville S, Howard W, Pruessner J, Safwat N, Cockerill FR, Bossler AD, Patel R, Richter SS. 2012. Evaluation of the Bruker Biotyper and Vitek MS matrix-assisted laser desorption ionization–time of flight mass spec-trometry systems for identification of nonfermenting Gram-negative bacilli isolated from cultures from cystic fibrosis patients. J. Clin. Micro-biol. 50:2034–2039. http://dx.doi.org/10.1128/JCM.00330-12.
    • (2012) J. Clin. Micro-biol , vol.50 , pp. 2034-2039
    • Marko, D.C.1    Saffert, R.T.2    Cunningham, S.A.3    Hyman, J.4    Walsh, J.5    Arbefe-Ville, S.6    Howard, W.7    Pruessner, J.8    Safwat, N.9    Cockerill, F.R.10    Bossler, A.D.11    Patel, R.12    Richter, S.S.13
  • 186
    • 84858594531 scopus 로고    scopus 로고
    • Comparison of the Microflex LT and Vitek MS systems for routine identification of bacteria by matrix-assisted laser desorption ionization–time of flight mass spectrometry
    • Martiny D, Busson L, Wybo I, El Haj RA, Dediste A, Vandenberg O. 2012. Comparison of the Microflex LT and Vitek MS systems for routine identification of bacteria by matrix-assisted laser desorption ionization–time of flight mass spectrometry. J. Clin. Microbiol. 50:1313–1325. http://dx.doi.org/10.1128/JCM.05971-11.
    • (2012) J. Clin. Microbiol , vol.50 , pp. 1313-1325
    • Martiny, D.1    Busson, L.2    Wybo, I.3    El Haj, R.A.4    Dediste, A.5    Vandenberg, O.6
  • 191
    • 79551560563 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the identificationofclinically relevant bacteria
    • Benagli C, Rossi V, Dolina M, Tonolla M, Petrini O. 2011. Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the identificationofclinically relevant bacteria. PLoS One 6:e16424. http://dx.doi.org/10.1371/journal.pone.0016424.
    • (2011) PLoS One , vol.6
    • Benagli, C.1    Rossi, V.2    Dolina, M.3    Tonolla, M.4    Petrini, O.5
  • 192
    • 79952347401 scopus 로고    scopus 로고
    • Comparison of Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometer to BD Phoenix automated microbiology system for identification of gram-negative bacilli
    • Saffert RT, Cunningham SA, Ihde SM, Jobe KE, Mandrekar J, Patel R. 2011. Comparison of Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometer to BD Phoenix automated microbiology system for identification of gram-negative bacilli. J. Clin. Microbiol. 49:887–892. http://dx.doi.org/10.1128/JCM.01890-10.
    • (2011) J. Clin. Microbiol , vol.49 , pp. 887-892
    • Saffert, R.T.1    Cunningham, S.A.2    Ihde, S.M.3    Jobe, K.E.4    Mandrekar, J.5    Patel, R.6
  • 193
    • 84866460224 scopus 로고    scopus 로고
    • Prospective evaluation of a matrix-assisted laser desorption ionization-time of flight mass spectrometry system in a hospital clinical microbiology laboratory for identificationofbacteria and yeasts:A bench-by-bench study for assessing the impact on time to identification and cost-effectiveness
    • Tan KE, Ellis BC, Lee R, Stamper PD, Zhang SX, Carroll KC. 2012. Prospective evaluation of a matrix-assisted laser desorption ionization-time of flight mass spectrometry system in a hospital clinical microbiology laboratory for identificationofbacteria and yeasts:a bench-by-bench study for assessing the impact on time to identification and cost-effectiveness. J. Clin. Microbiol. 50:3301–3308. http://dx.doi.org/10.1128/JCM.01405-12.
    • (2012) J. Clin. Microbiol , vol.50 , pp. 3301-3308
    • Tan, K.E.1    Ellis, B.C.2    Lee, R.3    Stamper, P.D.4    Zhang, S.X.5    Carroll, K.C.6
  • 195
    • 84895093433 scopus 로고    scopus 로고
    • Diafiltration MALDI-TOF mass spectrometry method for culture-independent detection and identification of pathogens directly from urine specimens
    • Demarco ML, Burnham CA. 2014. Diafiltration MALDI-TOF mass spectrometry method for culture-independent detection and identification of pathogens directly from urine specimens. Am. J. Clin. Pathol. 141:204–212. http://dx.doi.org/10.1309/AJCPQYW3B6JLKILC.
    • (2014) Am. J. Clin. Pathol , vol.141 , pp. 204-212
    • Demarco, M.L.1    Burnham, C.A.2
  • 196
    • 84856206216 scopus 로고    scopus 로고
    • Comparison of the MALDI Biotyper system using Sepsityper specimen processing toroutine microbiological methods for identification of bacteria from positive blood culture bottles
    • Buchan BW, Riebe KM, Ledeboer NA. 2012. Comparison of the MALDI Biotyper system using Sepsityper specimen processing toroutine microbiological methods for identification of bacteria from positive blood culture bottles. J. Clin. Microbiol. 50:346–352. http://dx.doi.org/10.1128/JCM.05021-11.
    • (2012) J. Clin. Microbiol , vol.50 , pp. 346-352
    • Buchan, B.W.1    Riebe, K.M.2    Ledeboer, N.A.3
  • 197
    • 84874074475 scopus 로고    scopus 로고
    • Rapid identification of bacteria and yeasts from positive-blood-culture bottlesbyusingalysis-filtration method and matrix-assisted laser desorption ionization-time of flight mass spectrum analysis with the SARAMIS database
    • Fothergill A, Kasinathan V, Hyman J, Walsh J, Drake T, Wang YF. 2013. Rapid identification of bacteria and yeasts from positive-blood-culture bottlesbyusingalysis-filtration method and matrix-assisted laser desorption ionization-time of flight mass spectrum analysis with the SARAMIS database. J. Clin. Microbiol. 51:805–809. http://dx.doi.org/10.1128/JCM.02326-12.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 805-809
    • Fothergill, A.1    Kasinathan, V.2    Hyman, J.3    Walsh, J.4    Drake, T.5    Wang, Y.F.6
  • 198
    • 84878496270 scopus 로고    scopus 로고
    • Direct bacterial identification in positive blood cultures by use of two commercial matrix-assisted laser desorption ionization-time of flight mass spectrometry systems
    • Chen JH, Ho PL, Kwan GS, She KK, Siu GK, Cheng VC, Yuen KY, Yam WC. 2013. Direct bacterial identification in positive blood cultures by use of two commercial matrix-assisted laser desorption ionization-time of flight mass spectrometry systems. J. Clin. Microbiol. 51:1733–1739. http://dx.doi.org/10.1128/JCM.03259-12.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 1733-1739
    • Chen, J.H.1    Ho, P.L.2    Kwan, G.S.3    She, K.K.4    Siu, G.K.5    Cheng, V.C.6    Yuen, K.Y.7    Yam, W.C.8
  • 199
    • 77958597011 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization time-of-flight mass spectrometry identifies 90% of bacteria directly from blood culture vials
    • Moussaoui W, Jaulhac B, Hoffmann AM, Ludes B, Kostrzewa M, Riegel P, Prevost G. 2010. Matrix-assisted laser desorption ionization time-of-flight mass spectrometry identifies 90% of bacteria directly from blood culture vials. Clin. Microbiol. Infect. 16:1631–1638. http://dx.doi.org/10.1111/j.1469-0691.2010.03356.x.
    • (2010) Clin. Microbiol. Infect , vol.16 , pp. 1631-1638
    • Moussaoui, W.1    Jaulhac, B.2    Hoffmann, A.M.3    Ludes, B.4    Kostrzewa, M.5    Riegel, P.6    Prevost, G.7
  • 200
    • 75649119276 scopus 로고    scopus 로고
    • Rapid identification of bacteria in positive blood culture broths by matrix-assisted laser desorp-tion ionization–time of flight mass spectrometry
    • Stevenson LG, Drake SK, Murray PR. 2010. Rapid identification of bacteria in positive blood culture broths by matrix-assisted laser desorp-tion ionization–time of flight mass spectrometry. J. Clin. Microbiol. 48: 444–447. http://dx.doi.org/10.1128/JCM.01541-09.
    • (2010) J. Clin. Microbiol , vol.48 , pp. 444-447
    • Stevenson, L.G.1    Drake, S.K.2    Murray, P.R.3
  • 201
    • 84873965016 scopus 로고    scopus 로고
    • Direct identification of bacteria causing urinary tract infections by combining matrix-assisted laser desorption ionization-time offlight mass spectrom-etry with UF-1000i urine flow cytometry
    • Wang XH, Zhang G, Fan YY, Yang X, Sui WJ, Lu XX. 2013. Direct identification of bacteria causing urinary tract infections by combining matrix-assisted laser desorption ionization-time offlight mass spectrom-etry with UF-1000i urine flow cytometry. J. Microbiol. Methods 92:231–235. http://dx.doi.org/10.1016/j.mimet.2012.12.016.
    • (2013) J. Microbiol. Methods , vol.92 , pp. 231-235
    • Wang, X.H.1    Zhang, G.2    Fan, Y.Y.3    Yang, X.4    Sui, W.J.5    Lu, X.X.6
  • 202
    • 84886911636 scopus 로고    scopus 로고
    • Impact of rapid organism identification via matrix-assisted laser desorption ionization time-of-flight combined with antimicrobial stewardship team intervention in adult patients with bac-teremia and candidemia
    • Huang AM, Newton D, Kunapuli A, Gandhi TN, Washer LL, Isip J, Collins CD, Nagel JL. 2013. Impact of rapid organism identification via matrix-assisted laser desorption ionization time-of-flight combined with antimicrobial stewardship team intervention in adult patients with bac-teremia and candidemia. Clin. Infect. Dis. 57:1237–1245. http://dx.doi.org/10.1093/cid/cit498.
    • (2013) Clin. Infect. Dis , vol.57 , pp. 1237-1245
    • Huang, A.M.1    Newton, D.2    Kunapuli, A.3    Gandhi, T.N.4    Washer, L.L.5    Isip, J.6    Collins, C.D.7    Nagel, J.L.8
  • 204
    • 84876705043 scopus 로고    scopus 로고
    • Advances in identification of clinical yeast isolates by use of matrix-assisted laser desorption ionization–time of flight mass spectrometry
    • Buchan BW, Ledeboer NA. 2013. Advances in identification of clinical yeast isolates by use of matrix-assisted laser desorption ionization–time of flight mass spectrometry. J. Clin. Microbiol. 51:1359–1366. http://dx.doi.org/10.1128/JCM.03105-12.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 1359-1366
    • Buchan, B.W.1    Ledeboer, N.A.2
  • 207
    • 83455212028 scopus 로고    scopus 로고
    • Mould routine identification in the clinical laboratory by matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    • Cassagne C, Ranque S, Normand AC, Fourquet P, Thiebault S, Pla-nard C, Hendrickx M, Piarroux R. 2011. Mould routine identification in the clinical laboratory by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. PLoS One 6:e28425. http://dx.doi.org/10.1371/journal.pone.0028425.
    • (2011) PLoS One , vol.6
    • Cassagne, C.1    Ranque, S.2    Normand, A.C.3    Fourquet, P.4    Thiebault, S.5    Pla-Nard, C.6    Hendrickx, M.7    Piarroux, R.8
  • 208
    • 84894470655 scopus 로고    scopus 로고
    • Comparison of MALDI-TOF MS with HPLC and nucleic acid sequencing for the identification of Mycobacterium species in cultures using solid medium and broth
    • Buchan BW, Riebe KM, Timke M, Kostrzewa M, Ledeboer NA. 2014. Comparison of MALDI-TOF MS with HPLC and nucleic acid sequencing for the identification of Mycobacterium species in cultures using solid medium and broth. Am. J. Clin. Pathol. 141:25–34. http://dx.doi.org/10.1309/AJCPBPUBUDEW2OAG.
    • (2014) Am. J. Clin. Pathol , vol.141 , pp. 25-34
    • Buchan, B.W.1    Riebe, K.M.2    Timke, M.3    Kostrzewa, M.4    Ledeboer, N.A.5
  • 209
    • 84882771247 scopus 로고    scopus 로고
    • Identification of my-cobacteria from solid and liquid media by matrix-assisted laser desorp-tion ionization–time of flight mass spectrometry in the clinical laboratory
    • Balada-Llasat JM, Kamboj K, Pancholi P. 2013. Identification of my-cobacteria from solid and liquid media by matrix-assisted laser desorp-tion ionization–time of flight mass spectrometry in the clinical laboratory. J. Clin. Microbiol. 51:2875–2879. http://dx.doi.org/10.1128/JCM.00819-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 2875-2879
    • Balada-Llasat, J.M.1    Kamboj, K.2    Pancholi, P.3
  • 210
    • 33745209203 scopus 로고    scopus 로고
    • Identification of mycobacteria by matrix-assisted laser desorption ionization–time-of-flight mass spectrometry
    • Pignone M, Greth KM, Cooper J, Emerson D, Tang J. 2006. Identification of mycobacteria by matrix-assisted laser desorption ionization–time-of-flight mass spectrometry. J.Clin. Microbiol. 44:1963–1970. http://dx.doi.org/10.1128/JCM.01959-05.
    • (2006) J.Clin. Microbiol , vol.44 , pp. 1963-1970
    • Pignone, M.1    Greth, K.M.2    Cooper, J.3    Emerson, D.4    Tang, J.5
  • 212
    • 84911006556 scopus 로고    scopus 로고
    • Comparison and optimization of two MALDI-TOF MS platforms for the identification of medically relevant yeast species
    • 7 May
    • Pence MA, McElvania Tekippe E, Wallace MA, Burnham CA. 7 May 2014. Comparison and optimization of two MALDI-TOF MS platforms for the identification of medically relevant yeast species. Eur. J. Clin. Microbiol. Infect. Dis. http://dx.doi.org/10.1007/s10096-014-2115-x.
    • (2014) Eur. J. Clin. Microbiol. Infect. Dis
    • Pence, M.A.1    McElvania Tekippe, E.2    Wallace, M.A.3    Burnham, C.A.4
  • 213
    • 80051876952 scopus 로고    scopus 로고
    • Improved clinical laboratory identification of human pathogenic yeasts by matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    • Bader O, Weig M, Taverne-Ghadwal L, Lugert R, Gross U, Kuhns M. 2011. Improved clinical laboratory identification of human pathogenic yeasts by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin. Microbiol. Infect. 17:1359–1365. http://dx.doi.org/10.1111/j.1469-0691.2010.03398.x.
    • (2011) Clin. Microbiol. Infect , vol.17 , pp. 1359-1365
    • Bader, O.1    Weig, M.2    Taverne-Ghadwal, L.3    Lugert, R.4    Gross, U.5    Kuhns, M.6
  • 214
    • 79953869376 scopus 로고    scopus 로고
    • Performance and cost analysis of matrix-assisted laser desorp-tion ionization-time of flight mass spectrometry for routine identification of yeast
    • Dhiman N, Hall L, Wohlfiel SL, Buckwalter SP, Wengenack NL. 2011. Performance and cost analysis of matrix-assisted laser desorp-tion ionization-time of flight mass spectrometry for routine identification of yeast. J. Clin. Microbiol. 49:1614–1616. http://dx.doi.org/10.1128/JCM.02381-10.
    • (2011) J. Clin. Microbiol , vol.49 , pp. 1614-1616
    • Dhiman, N.1    Hall, L.2    Wohlfiel, S.L.3    Buckwalter, S.P.4    Wengenack, N.L.5
  • 215
  • 216
    • 77957809580 scopus 로고    scopus 로고
    • Evaluation of matrix-assisted laser desorption ionization–time of flight mass spectrometry for identification of clinically important yeast species
    • Stevenson LG, Drake SK, Shea YR, Zelazny AM, Murray PR. 2010. Evaluation of matrix-assisted laser desorption ionization–time of flight mass spectrometry for identification of clinically important yeast species. J. Clin. Microbiol. 48:3482–3486. http://dx.doi.org/10.1128/JCM.00687-09.
    • (2010) J. Clin. Microbiol , vol.48 , pp. 3482-3486
    • Stevenson, L.G.1    Drake, S.K.2    Shea, Y.R.3    Zelazny, A.M.4    Murray, P.R.5
  • 217
    • 84891376148 scopus 로고    scopus 로고
    • Comparison of the Bruker Biotyper and Vitek MS matrix-assisted laser desorption ionization–time of flight mass spectrometry systems for identification of mycobacteria using simplified protein extraction protocols
    • Mather CA, Rivera SF, Butler-Wu SM. 2014. Comparison of the Bruker Biotyper and Vitek MS matrix-assisted laser desorption ionization–time of flight mass spectrometry systems for identification of mycobacteria using simplified protein extraction protocols. J. Clin. Microbiol. 52:130–138. http://dx.doi.org/10.1128/JCM.01996-13.
    • (2014) J. Clin. Microbiol , vol.52 , pp. 130-138
    • Mather, C.A.1    Rivera, S.F.2    Butler-Wu, S.M.3
  • 218
    • 79955528822 scopus 로고    scopus 로고
    • Identification of mycobacteria in solid-culture media by matrix-assisted laser desorption ionization–time offlight mass spectrometry
    • Saleeb PG, Drake SK, Murray PR, Zelazny AM. 2011. Identification of mycobacteria in solid-culture media by matrix-assisted laser desorption ionization–time offlight mass spectrometry.J. Clin. Microbiol. 49:1790–1794. http://dx.doi.org/10.1128/JCM.02135-10.
    • (2011) J. Clin. Microbiol , vol.49 , pp. 1790-1794
    • Saleeb, P.G.1    Drake, S.K.2    Murray, P.R.3    Zelazny, A.M.4
  • 220
    • 84898058457 scopus 로고    scopus 로고
    • The influence of culture conditions on the identification of Myco-bacterium species by MALDI-TOF MS profiling
    • Balazova T, Makovcova J, Sedo O, Slany M, Faldyna M, Zdrahal Z. 2014. The influence of culture conditions on the identification of Myco-bacterium species by MALDI-TOF MS profiling. FEMS Microbiol. Lett. 353:77–84. http://dx.doi.org/10.1111/1574-6968.12408.
    • (2014) FEMS Microbiol. Lett , vol.353 , pp. 77-84
    • Balazova, T.1    Makovcova, J.2    Sedo, O.3    Slany, M.4    Faldyna, M.5    Zdrahal, Z.6
  • 221
    • 84857382388 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization–time of flight mass spec-trometry-based functional assay for rapid detection of resistance against beta-lactam antibiotics
    • Sparbier K, Schubert S, Weller U, Boogen C, Kostrzewa M. 2012. Matrix-assisted laser desorption ionization–time of flight mass spec-trometry-based functional assay for rapid detection of resistance against beta-lactam antibiotics. J. Clin. Microbiol. 50:927–937. http://dx.doi.org/10.1128/JCM.05737-11.
    • (2012) J. Clin. Microbiol , vol.50 , pp. 927-937
    • Sparbier, K.1    Schubert, S.2    Weller, U.3    Boogen, C.4    Kostrzewa, M.5
  • 223
    • 84886450400 scopus 로고    scopus 로고
    • MALDI Biotyper-based rapid resistance detection by stable-isotope labeling
    • Sparbier K, Lange C, Jung J, Wieser A, Schubert S, Kostrzewa M. 2013. MALDI Biotyper-based rapid resistance detection by stable-isotope labeling. J. Clin. Microbiol. 51:3741–3748. http://dx.doi.org/10.1128/JCM.01536-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 3741-3748
    • Sparbier, K.1    Lange, C.2    Jung, J.3    Wieser, A.4    Schubert, S.5    Kostrzewa, M.6
  • 224
    • 78049522776 scopus 로고    scopus 로고
    • Initial identification and characterization of an emerging zoonotic influenza virus prior to pandemic spread
    • Metzgar D, Baynes D, Myers CA, Kammerer P, Unabia M, Faix DJ, Blair PJ. 2010. Initial identification and characterization of an emerging zoonotic influenza virus prior to pandemic spread. J. Clin. Microbiol. 48:4228–4234. http://dx.doi.org/10.1128/JCM.01336-10.
    • (2010) J. Clin. Microbiol , vol.48 , pp. 4228-4234
    • Metzgar, D.1    Baynes, D.2    Myers, C.A.3    Kammerer, P.4    Unabia, M.5    Faix, D.J.6    Blair, P.J.7
  • 227
    • 79959704052 scopus 로고    scopus 로고
    • Comparative analysis of PCR-electrospray ioniza-tion/mass spectrometry (MS) and MALDI-TOF/MS for the identification of bacteria and yeast from positive blood culture bottles
    • Kaleta EJ, Clark AE, Cherkaoui A, Wysocki VH, Ingram EL, Schrenzel J, Wolk DM. 2011. Comparative analysis of PCR-electrospray ioniza-tion/mass spectrometry (MS) and MALDI-TOF/MS for the identification of bacteria and yeast from positive blood culture bottles. Clin. Chem. 57:1057–1067. http://dx.doi.org/10.1373/clinchem.2011.161968.
    • (2011) Clin. Chem , vol.57 , pp. 1057-1067
    • Kaleta, E.J.1    Clark, A.E.2    Cherkaoui, A.3    Wysocki, V.H.4    Ingram, E.L.5    Schrenzel, J.6    Wolk, D.M.7
  • 228
    • 78650854004 scopus 로고    scopus 로고
    • Use of PCR coupled with electro-spray ionization mass spectrometry for rapid identification of bacterial and yeast bloodstream pathogens from blood culture bottles
    • Kaleta EJ, Clark AE, Johnson DR, Gamage DC, Wysocki VH, Cherka-oui A, Schrenzel J, Wolk DM. 2011. Use of PCR coupled with electro-spray ionization mass spectrometry for rapid identification of bacterial and yeast bloodstream pathogens from blood culture bottles. J. Clin. Microbiol. 49:345–353. http://dx.doi.org/10.1128/JCM.00936-10.
    • (2011) J. Clin. Microbiol , vol.49 , pp. 345-353
    • Kaleta, E.J.1    Clark, A.E.2    Johnson, D.R.3    Gamage, D.C.4    Wysocki, V.H.5    Cherka-Oui, A.6    Schrenzel, J.7    Wolk, D.M.8
  • 229
    • 84870856926 scopus 로고    scopus 로고
    • Detection and identification of Salmonella enterica, Escherichia coli, and Shigella spp. via PCR-electrospray ionization mass spectrometry: Isolate testing and analysis of food samples
    • Pierce SE, Bell RL, Hellberg RS, Cheng CM, Chen KS, Williams-Hill DM, Martin WB, Allard MW. 2012. Detection and identification of Salmonella enterica, Escherichia coli, and Shigella spp. via PCR-electrospray ionization mass spectrometry: isolate testing and analysis of food samples. Appl. Environ. Microbiol. 78:8403–8411. http://dx.doi.org/10.1128/AEM.02272-12.
    • (2012) Appl. Environ. Microbiol , vol.78 , pp. 8403-8411
    • Pierce, S.E.1    Bell, R.L.2    Hellberg, R.S.3    Cheng, C.M.4    Chen, K.S.5    Williams-Hill, D.M.6    Martin, W.B.7    Allard, M.W.8
  • 231
    • 84891393399 scopus 로고    scopus 로고
    • Evaluation of a polymerase chain reaction-electrospray ionization time-of-flight mass spectrometry for the detection and subtyping of influenza viruses in respiratory specimens
    • Mengelle C, Mansuy JM, Da Silva I, Guerin JL, Izopet J. 2013. Evaluation of a polymerase chain reaction-electrospray ionization time-of-flight mass spectrometry for the detection and subtyping of influenza viruses in respiratory specimens. J. Clin. Virol. 57:222–226. http://dx.doi.org/10.1016/j.jcv.2013.03.004.
    • (2013) J. Clin. Virol , vol.57 , pp. 222-226
    • Mengelle, C.1    Mansuy, J.M.2    Da Silva, I.3    Guerin, J.L.4    Izopet, J.5
  • 234
    • 77950477553 scopus 로고    scopus 로고
    • Improved diagnosis of periprosthetic joint infection by multiplex PCR of sonication fluid from removed implants
    • Achermann Y, Vogt M, Leunig M, Wust J, Trampuz A. 2010. Improved diagnosis of periprosthetic joint infection by multiplex PCR of sonication fluid from removed implants. J. Clin. Microbiol. 48:1208–1214. http://dx.doi.org/10.1128/JCM.00006-10.
    • (2010) J. Clin. Microbiol , vol.48 , pp. 1208-1214
    • Achermann, Y.1    Vogt, M.2    Leunig, M.3    Wust, J.4    Trampuz, A.5
  • 235
  • 236
    • 84871502231 scopus 로고    scopus 로고
    • Successful identification of pathogens by polymerase chain reaction (PCR)-based electron spray ionization time-of-flight mass spectrometry (ESI-TOF-MS) inculture-negative periprosthetic joint infection
    • Jacovides CL, Kreft R, Adeli B, Hozack B, Ehrlich GD, Parvizi J. 2012. Successful identification of pathogens by polymerase chain reaction (PCR)-based electron spray ionization time-of-flight mass spectrometry (ESI-TOF-MS) inculture-negative periprosthetic joint infection. J. Bone Joint Surg. Am. 94:2247–2254. http://dx.doi.org/10.2106/JBJS.L.00210.
    • (2012) J. Bone Joint Surg. Am , vol.94 , pp. 2247-2254
    • Jacovides, C.L.1    Kreft, R.2    Adeli, B.3    Hozack, B.4    Ehrlich, G.D.5    Parvizi, J.6
  • 238
    • 84878492961 scopus 로고    scopus 로고
    • Broad-range direct detection and identification of fungi by use of the PLEX-ID PCR-electrospray ionization mass spec-trometry system
    • Simner PJ, Uhl JR, Hall L, Weber MM, Walchak RC, Buckwalter S, Wengenack NL. 2013. Broad-range direct detection and identification of fungi by use of the PLEX-ID PCR-electrospray ionization mass spec-trometry system. J. Clin. Microbiol. 51:1699–1706. http://dx.doi.org/10.1128/JCM.03282-12.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 1699-1706
    • Simner, P.J.1    Uhl, J.R.2    Hall, L.3    Weber, M.M.4    Walchak, R.C.5    Buckwalter, S.6    Wengenack, N.L.7
  • 239
    • 79955408437 scopus 로고    scopus 로고
    • Automation in clinical bacteriology: What system to choose
    • Greub G, Prod’hom G. 2011. Automation in clinical bacteriology: what system to choose? Clin. Microbiol. Infect. 17:655–660. http://dx.doi.org/10.1111/j.1469-0691.2011.03513.x.
    • (2011) Clin. Microbiol. Infect , vol.17 , pp. 655-660
    • Greub, G.1    Prod’hom, G.2
  • 240
    • 84881500588 scopus 로고    scopus 로고
    • Automation in the clinical microbiology laboratory
    • Novak SM, Marlowe EM. 2013. Automation in the clinical microbiology laboratory. Clin. Lab. Med. 33:567–588. http://dx.doi.org/10.1016/j.cll.2013.03.002.
    • (2013) Clin. Lab. Med , vol.33 , pp. 567-588
    • Novak, S.M.1    Marlowe, E.M.2
  • 241
    • 84878492392 scopus 로고    scopus 로고
    • Automation in clinical microbiology
    • Bourbeau PP, Ledeboer NA. 2013. Automation in clinical microbiology. J. Clin. Microbiol. 51:1658–1665. http://dx.doi.org/10.1128/JCM.00301-13.
    • (2013) J. Clin. Microbiol , vol.51 , pp. 1658-1665
    • Bourbeau, P.P.1    Ledeboer, N.A.2
  • 242
    • 84889770881 scopus 로고    scopus 로고
    • Automation in the clinical microbiology laboratory. Clin
    • Burnham CA, Dunne WM, Jr, Greub G, Novak SM, Patel R. 2013. Automation in the clinical microbiology laboratory. Clin. Chem. 59: 1696–1702. http://dx.doi.org/10.1373/clinchem.2012.201038.
    • (2013) Chem , vol.59 , pp. 1696-1702
    • Burnham, C.A.1    Dunne, W.M.2    Greub, G.3    Novak, S.M.4    Patel, R.5
  • 243
    • 84864416379 scopus 로고    scopus 로고
    • First evaluation of automated specimen inoculation for wound swab samples by use of the Previ Isola system compared to manual inoculation in a routine laboratory: Finding a cost-effective and accurate approach
    • Mischnik A, Mieth M, Busch CJ, Hofer S, Zimmermann S. 2012. First evaluation of automated specimen inoculation for wound swab samples by use of the Previ Isola system compared to manual inoculation in a routine laboratory: finding a cost-effective and accurate approach. J. Clin. Microbiol. 50:2732–2736. http://dx.doi.org/10.1128/JCM.05501-11.
    • (2012) J. Clin. Microbiol , vol.50 , pp. 2732-2736
    • Mischnik, A.1    Mieth, M.2    Busch, C.J.3    Hofer, S.4    Zimmermann, S.5
  • 244
    • 65249157909 scopus 로고    scopus 로고
    • First evaluation of the WASP, a new automated microbiology plating instrument
    • Bourbeau PP, Swartz BL. 2009. First evaluation of the WASP, a new automated microbiology plating instrument. J. Clin. Microbiol. 47: 1101–1106. http://dx.doi.org/10.1128/JCM.01963-08.
    • (2009) J. Clin. Microbiol , vol.47 , pp. 1101-1106
    • Bourbeau, P.P.1    Swartz, B.L.2
  • 245
    • 42449089845 scopus 로고    scopus 로고
    • Evaluation of an automated instrument for inoculating and spreading samples onto agar plates
    • Glasson JH, Guthrie LH, Nielsen DJ, Bethell FA. 2008. Evaluation of an automated instrument for inoculating and spreading samples onto agar plates. J. Clin. Microbiol. 46:1281–1284. http://dx.doi.org/10.1128/JCM.01687-07.
    • (2008) J. Clin. Microbiol , vol.46 , pp. 1281-1284
    • Glasson, J.H.1    Guthrie, L.H.2    Nielsen, D.J.3    Bethell, F.A.4
  • 246
    • 0017839584 scopus 로고
    • Evaluation of an automated agar plate streaker
    • Tilton RC, Ryan RW. 1978. Evaluation of an automated agar plate streaker. J. Clin. Microbiol. 7:298–304.
    • (1978) J. Clin. Microbiol , vol.7 , pp. 298-304
    • Tilton, R.C.1    Ryan, R.W.2
  • 247
    • 43249093989 scopus 로고    scopus 로고
    • Comparison of the Copan ESwab system with two Amies agar swab transport systems for maintenance ofmicroorganism viability
    • Van Horn KG, Audette CD, Sebeck D, Tucker KA. 2008. Comparison of the Copan ESwab system with two Amies agar swab transport systems for maintenance ofmicroorganism viability.J. Clin. Microbiol. 46:1655–1658. http://dx.doi.org/10.1128/JCM.02047-07.
    • (2008) J. Clin. Microbiol , vol.46 , pp. 1655-1658
    • Van Horn, K.G.1    Audette, C.D.2    Sebeck, D.3    Tucker, K.A.4
  • 248
    • 53649108016 scopus 로고    scopus 로고
    • Viability of Trichomonas vaginalis in Co-pan universal transport medium and eSwab transport medium
    • Rivers CA, Schwebke JR. 2008. Viability of Trichomonas vaginalis in Co-pan universal transport medium and eSwab transport medium. J. Clin. Mi-crobiol. 46:3134–3155. http://dx.doi.org/10.1128/JCM.00841-08.
    • (2008) J. Clin. Mi-crobiol , vol.46 , pp. 3134-3155
    • Rivers, C.A.1    Schwebke, J.R.2
  • 249
    • 77952099057 scopus 로고    scopus 로고
    • Comparison of Copan eSwab with the Copan Venturi Transystem for the quantitative survival of Escherichia coli, Streptococcus agalactiae and Candida albicans
    • Nys S, Vijgen S, Magerman K, Cartuyvels R. 2010. Comparison of Copan eSwab with the Copan Venturi Transystem for the quantitative survival of Escherichia coli, Streptococcus agalactiae and Candida albicans. Eur. J. Clin. Microbiol. Infect. Dis. 29:453–456. http://dx.doi.org/10.1007/s10096-010-0883-5.
    • (2010) Eur. J. Clin. Microbiol. Infect. Dis , vol.29 , pp. 453-456
    • Nys, S.1    Vijgen, S.2    Magerman, K.3    Cartuyvels, R.4
  • 250
    • 80051551129 scopus 로고    scopus 로고
    • Clinical evaluation of the Copan ESwab for methicillin-resistant Staphylococcus aureus detection and culture of wounds
    • Saegeman V, Flamaing J, Muller J, Peetermans WE, Stuyck J, Verhae-gen J. 2011. Clinical evaluation of the Copan ESwab for methicillin-resistant Staphylococcus aureus detection and culture of wounds. Eur. J. Clin. Microbiol. Infect. Dis. 30:943–949. http://dx.doi.org/10.1007/s10096-011-1178-1.
    • (2011) Eur. J. Clin. Microbiol. Infect. Dis , vol.30 , pp. 943-949
    • Saegeman, V.1    Flamaing, J.2    Muller, J.3    Peetermans, W.E.4    Stuyck, J.5    Verhae-Gen, J.6
  • 251
    • 70049104591 scopus 로고    scopus 로고
    • Evaluation of the Copan ESwab transport system for the detection of methicillin-resistant Staphylococcus aureus: A laboratory and clinical study
    • Smismans A, Verhaegen J, Schuermans A, Frans J. 2009. Evaluation of the Copan ESwab transport system for the detection of methicillin-resistant Staphylococcus aureus: a laboratory and clinical study. Diagn. Microbiol. Infect. Dis. 65:108–111. http://dx.doi.org/10.1016/j.diagmicrobio.2009.06.015.
    • (2009) Diagn. Microbiol. Infect. Dis , vol.65 , pp. 108-111
    • Smismans, A.1    Verhaegen, J.2    Schuermans, A.3    Frans, J.4
  • 252
    • 84866381849 scopus 로고    scopus 로고
    • Eswab flocked swabs unfit for viral culture
    • Indevuyst C, Beuselinck K, Lagrou K. 2012. Eswab flocked swabs unfit for viral culture. J. Clin. Virol. 55:282–283. http://dx.doi.org/10.1016/j.jcv.2012.07.006.
    • (2012) J. Clin. Virol , vol.55 , pp. 282-283
    • Indevuyst, C.1    Beuselinck, K.2    Lagrou, K.3
  • 253
    • 84897853488 scopus 로고    scopus 로고
    • Performance of Kiestra total laboratory automation combined with MS in clinical microbiology practice
    • Mutters NT, Hodiamont CJ, de Jong MD, Overmeijer HP, van den Boogaard M, Visser CE. 2014. Performance of Kiestra total laboratory automation combined with MS in clinical microbiology practice. Ann. Lab. Med. 34:111–117. http://dx.doi.org/10.3343/alm.2014.34.2.111.
    • (2014) Ann. Lab. Med , vol.34 , pp. 111-117
    • Mutters, N.T.1    Hodiamont, C.J.2    De Jong, M.D.3    Overmeijer, H.P.4    Van Den Boogaard, M.5    Visser, C.E.6
  • 254
    • 79955435121 scopus 로고    scopus 로고
    • The future of diagnostic bacteriology
    • Matthews S, Deutekom J. 2011. The future of diagnostic bacteriology. Clin. Microbiol. Infect. 17:651–654. http://dx.doi.org/10.1111/j.1469 -0691.2011.03512.x.
    • (2011) Clin. Microbiol. Infect , vol.17 , pp. 651-654
    • Matthews, S.1    Deutekom, J.2
  • 256
    • 85041501993 scopus 로고    scopus 로고
    • Experience with KIESTRA’s Total Lab Automation solutiion to meet teh challenge ofuniversal MRSA screening for Lister Hospital,alargeUK distract general hospital
    • abstr, Milan, Italy
    • Humphrey G, Malone C, Gough H, Awadel-Kariem M. 2011. Experience with KIESTRA’s Total Lab Automation solutiion to meet teh challenge ofuniversal MRSA screening for Lister Hospital,alargeUK distract general hospital, abstr P 1793. Abstr. Eur. Congr. Clin. Microbiol. Infect. Dis., Milan, Italy.
    • (2011) Abstr. Eur. Congr. Clin. Microbiol. Infect. Dis , pp. 1793
    • Humphrey, G.1    Malone, C.2    Gough, H.3    Awadel-Kariem, M.4
  • 257
    • 84907715674 scopus 로고    scopus 로고
    • Molecular testing platforms a land of plenty
    • Ford A. 2013. Molecular testing platforms a land of plenty. CAP Today 27:22–42.
    • (2013) CAP Today , vol.27 , pp. 22-42
    • Ford, A.1
  • 258
    • 77955471303 scopus 로고    scopus 로고
    • Evaluation of the Xpert MRSA assay for rapid detection of methicillin-resistant Staphylococcus aureus from nares swabs of geriatric hospitalized patients and failure to detect a specific SCCmec type IV variant
    • Laurent C, Bogaerts P, Schoevaerdts D, Denis O, Deplano A, Swine C, Struelens MJ, Glupczynski Y. 2010. Evaluation of the Xpert MRSA assay for rapid detection of methicillin-resistant Staphylococcus aureus from nares swabs of geriatric hospitalized patients and failure to detect a specific SCCmec type IV variant. Eur. J. Clin. Microbiol. Infect. Dis. 29:995–1002. http://dx.doi.org/10.1007/s10096-010-0958-3.
    • (2010) Eur. J. Clin. Microbiol. Infect. Dis , vol.29 , pp. 995-1002
    • Laurent, C.1    Bogaerts, P.2    Schoevaerdts, D.3    Denis, O.4    Deplano, A.5    Swine, C.6    Struelens, M.J.7    Glupczynski, Y.8
  • 259
    • 62749094404 scopus 로고    scopus 로고
    • Rapid detection of Staphylococcus aureus and methicillin-resistant S. aureus (MRSA)inwound specimens and blood cultures: Multicenter preclinical evaluationof the Cepheid Xpert MRSA/SA skin and soft tissue and blood culture assays
    • Wolk DM, Struelens MJ, Pancholi P, Davis T, Della-Latta P, Fuller D, Picton E, Dickenson R, Denis O, Johnson D, Chapin K. 2009. Rapid detection of Staphylococcus aureus and methicillin-resistant S. aureus (MRSA)inwound specimens and blood cultures: multicenter preclinical evaluationof the Cepheid Xpert MRSA/SA skin and soft tissue and blood culture assays. J. Clin. Microbiol. 47:823–826. http://dx.doi.org/10.1128/JCM.01884-08.
    • (2009) J. Clin. Microbiol , vol.47 , pp. 823-826
    • Wolk, D.M.1    Struelens, M.J.2    Pancholi, P.3    Davis, T.4    Della-Latta, P.5    Fuller, D.6    Picton, E.7    Dickenson, R.8    Denis, O.9    Johnson, D.10    Chapin, K.11
  • 260
    • 80355126480 scopus 로고    scopus 로고
    • Validation and implementation of the GeneXpert MRSA/SA blood culture assay in a pediatric setting
    • Spencer DH, Sellenriek P, Burnham CA. 2011. Validation and implementation of the GeneXpert MRSA/SA blood culture assay in a pediatric setting. Am. J. Clin. Pathol. 136:690–694. http://dx.doi.org/10.1309/AJCP07UGYOKBVVNC.
    • (2011) Am. J. Clin. Pathol , vol.136 , pp. 690-694
    • Spencer, D.H.1    Sellenriek, P.2    Burnham, C.A.3
  • 261
    • 80051688000 scopus 로고    scopus 로고
    • Field guide to next-generation DNA sequencers
    • Glenn TC. 2011. Field guide to next-generation DNA sequencers. Mol. Ecol. Resources 11:759–769. http://dx.doi.org/10.1111/j.1755-0998.2011.03024.x.
    • (2011) Mol. Ecol. Resources , vol.11 , pp. 759-769
    • Glenn, T.C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.