Maldi biotyper-based rapid resistance detection by stable-isotope labeling

Journal of Clinical Microbiology

Volumn 51, Issue 11, 2013, Pages 3741-3748

  Sparbier, Katrin ^a   Lange, Christoph ^a   Jung, Jette ^b   Wieser, Andreas ^b   Schubert, Sören ^b   Kostrzewa, Markus ^a  

^a BRUKER DALTONIK GMBH   (Germany)

^b UNIVERSITY OF MUNICH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CEFOXITIN; OXACILLIN;

ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIAL STRAIN; BACTERIUM DETECTION; BIOINFORMATICS; CLASSIFICATION; COMPUTER PROGRAM; CONTROLLED STUDY; MASS SPECTROMETRIC RESISTANCE TEST WITH STABLE ISOTOPE; MASS SPECTROMETRY; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS; METHICILLIN SUSCEPTIBLE STAPHYLOCOCCUS AUREUS; MINIMUM INHIBITORY CONCENTRATION; NONHUMAN; PRIORITY JOURNAL; REPRODUCIBILITY;

AMINO ACIDS; ANTI-BACTERIAL AGENTS; DRUG RESISTANCE, BACTERIAL; HUMANS; ISOTOPE LABELING; METHICILLIN-RESISTANT STAPHYLOCOCCUS AUREUS; MICROBIAL SENSITIVITY TESTS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 84886450400     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.01536-13     Document Type: Article

References (17)

1. Leone M, Martin C. 2008. How to break the vicious circle of antibiotic resistances? Curr. Opin. Crit. Care 14:587-592.
2. Bou G. 2007. Minimum inhibitory concentration (MIC) analysis and susceptibility testing of MRSA. Methods Mol. Biol. 391:29-49.
3. Woodford N, Eastaway AT, Ford M, Leanord A, Keane C, Quayle RM, Steer JA, Zhang J, Livermore DM. 2010. Comparison of BD Phoenix, Vitek 2, and MicroScan automated systems for detection and inference of mechanisms responsible for carbapenem resistance in Enterobacteriaceae. J. Clin. Microbiol. 48:2999-3002.
4. Mellmann A, Bimet F, Bizet C, Borovskaya AD, Drake RR, Eigner U, Fahr AM, He Y, Ilina EN, Kostrzewa M, Maier T, Mancinelli L, Moussaoui W, Prévost G, Putignani L, Seachord CL, Tang YW, Harmsen D. 2009. High interlaboratory reproducibility of matrix-assisted laser desorption ionizationtime of flight mass spectrometry-based species identification of nonfermenting bacteria. J. Clin. Microbiol. 47:3732-3734.
5. Sauer S, Kliem M. 2010. Mass spectrometry tools for the classification and identification of bacteria. Nat. Rev. Microbiol. 8:74-82.
6. Seng P, Rolain J-M, Fournier PE, La Scola B, Drancourt M, Raoult D. 2010. MALDI-TOF-mass spectrometry applications in clinical microbiology. Future Microbiol. 5:1733-1754.
7. Sparbier K, Schubert S, Weller U, Boogen C, Kostrzewa M. 2012. Matrix-assisted laser desorption ionization-time of flight mass spectrometry- based functional assay for rapid detection of resistance against-lactam antibiotics. J. Clin. Microbiol. 50:927-937.
8. Hrabák J, Walková R, Studentová V, Chudácková E, Bergerová T. 2011. Carbapenemase activity detection by matrix-assisted laser desorption ionization- time of flight mass spectrometry. J. Clin. Microbiol. 49:3222-3227.
9. Burckhardt I, Zimmermann S. 2011. Using matrix-assisted laser desorption ionization-time of flight mass spectrometry to detect carbapenem resistance within 1 to 2.5 hours. J. Clin. Microbiol. 49:3321-3324.
10. Sauer S, Freiwald A, Maier T, Kube M, Reinhardt R, Kostrzewa M, Geider K. 2008. Classification and identification of bacteria by mass spectrometry and computational analysis. PLoS One 3:e2843. doi:10.1371/journal.pone.0002843.
11. R Development Core Team. 2011. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.
12. Gibb S, Strimmer K. 2012. MALDIquant: a versatile R package for the analysis of mass spectrometry data. Bioinformatics 28:2270-2271.
13. Demirev PA, Hagan NS, Antoine MD, Lin JS, Feldman AB. 9 April 2013. Establishing drug resistance in microorganisms by mass spectrometry. J. Am. Soc. Mass Spectrom. [Epub ahead of print.] doi:10.1007/s13361-013 -0609-x.
14. Teramoto K, Sato H, Sun L, Torimura M, Tao H. 2007. A simple intact protein analysis by MALDI-MS for characterization of ribosomal proteins of two genome-sequenced lactic acid bacteria and verification of their amino acid sequences. J. Proteome Res. 6:3899-3907.
15. Teramoto K, Sato H, Sun L, Torimura M, Tao H, Yoshikawa H, Hotta Y, Hosoda A, Tamura H. 2007. Phylogenetic classification of Pseudomonas putida strains by MALDI-MS using ribosomal subunit proteins as biomarkers. Anal. Chem. 79:8712-8719.
16. Poole K. 2007. Efflux pumps as antimicrobial resistance mechanisms. Ann. Med. 39:162-176.
17. Tenover FC. 2006. Mechanisms of antimicrobial resistance in bacteria. Am. J. Med. 119:S3-S10; discussion S62-S70