Shining a Light on Dark Sequencing: Characterising Errors in Ion Torrent PGM Data

PLoS Computational Biology

Volumn 9, Issue 4, 2013, Pages

  Bragg, Lauren M ^a,b   Stone, Glenn ^c   Butler, Margaret K ^a   Hugenholtz, Philip ^a   Tyson, Gene W ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b CSIRO   (Australia)

^c UNIVERSITY OF WESTERN SYDNEY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

HOMOPOLYMERIZATION; RANDOM ERRORS;

CHIP DENSITY; DELETION ERRORS; ERROR TYPES; FLOW CYCLES; FLOW-LEVEL; HIGH FREQUENCY HF; MACHINE DATA; MAIN ERROR SOURCES; MEASURING PH; PERSONAL GENOMES;

GENE ENCODING;

ACCURACY; AMPLICON; ANALYTICAL ERROR; ARTICLE; BIOINFORMATICS; CONTROLLED STUDY; DATA ANALYSIS; DNA BASE COMPOSITION; DNA SEQUENCE; DNA TEMPLATE; GENETIC POLYMORPHISM; GENETIC PROCEDURES; GENOME ANALYSIS; INDEL MUTATION; ION TORRENT PERSONAL GENOME MACHINE; QUANTITATIVE ANALYSIS; SEQUENCE ANALYSIS; STATISTICAL MODEL;

EID: 84876933570     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1003031     Document Type: Article

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