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Volumn 2, Issue , 2012, Pages 779-884

Barley: Omics Approaches for Abiotic Stress Tolerance

Author keywords

Abiotic stress tolerance; Barley; Genetical genomics; Omics; Quantitative genetics; Yield potential

Indexed keywords


EID: 84885728328     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9783527632930.ch34     Document Type: Chapter
Times cited : (5)

References (433)
  • 1
    • 22144473378 scopus 로고    scopus 로고
    • Developmental determinants of sensitivity and resistance to stress
    • Levine, S. (2005) Developmental determinants of sensitivity and resistance to stress. Psychoneuroendocrinology, 30, 939-946.
    • (2005) Psychoneuroendocrinology , vol.30 , pp. 939-946
    • Levine, S.1
  • 2
    • 6044233140 scopus 로고
    • Stress bei Pflanzen
    • Larcher, W. (1987) Stress bei Pflanzen. Naturwissenschaften, 74, 158-167.
    • (1987) Naturwissenschaften , vol.74 , pp. 158-167
    • Larcher, W.1
  • 3
    • 0346565879 scopus 로고
    • Larcher's definition of plant stress: a valuable principle for metabolic adaptability research
    • Pahlich, E. (1993) Larcher's definition of plant stress: a valuable principle for metabolic adaptability research. Braz.J. Plant Physiol., 5 (2), 209-216.
    • (1993) Braz.J. Plant Physiol , vol.5 , Issue.2 , pp. 209-216
    • Pahlich, E.1
  • 4
    • 0038034471 scopus 로고    scopus 로고
    • Genetic improvement of barley yield potential and its physiological determinants in Argentina (1944-1998)
    • Abeledo, L.G., Calderoni, D.F., and Slafer, G.A. (2003) Genetic improvement of barley yield potential and its physiological determinants in Argentina (1944-1998). Euphytica, 130 (3), 325-334.
    • (2003) Euphytica , vol.130 , Issue.3 , pp. 325-334
    • Abeledo, L.G.1    Calderoni, D.F.2    Slafer, G.A.3
  • 5
    • 77957080749 scopus 로고    scopus 로고
    • Diversity in abiotic stress tolerances
    • in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam
    • Stanca, A.M., Romagosa, I., Takeda, K., Lundborg, T., Terzi, V., and Cattivelli, L. (2003) Diversity in abiotic stress tolerances, in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam, pp. 179-199.
    • (2003) , pp. 179-199
    • Stanca, A.M.1    Romagosa, I.2    Takeda, K.3    Lundborg, T.4    Terzi, V.5    Cattivelli, L.6
  • 6
    • 84885786539 scopus 로고    scopus 로고
    • Barley, in Evolution and Adaptation of Cereal Crops
    • (eds V.L. Chopra and S. Prakash), Science Publishers Inc., Enfield
    • Pecchioni, N., Cattivelli, L., Delogu, G., Faccioli, P., Terzi, V., Vale, G., and Stanca, A.M. (2002) Barley, in Evolution and Adaptation of Cereal Crops (eds V.L. Chopra and S. Prakash), Science Publishers Inc., Enfield, pp. 135-211.
    • (2002) , pp. 135-211
    • Pecchioni, N.1    Cattivelli, L.2    Delogu, G.3    Faccioli, P.4    Terzi, V.5    Vale, G.6    Stanca, A.M.7
  • 7
    • 0003630378 scopus 로고
    • Responses of Plants to Environmental Stresses
    • Academic Press, New York.
    • Levitt, J. (1980) Responses of Plants to Environmental Stresses, Academic Press, New York.
    • (1980)
    • Levitt, J.1
  • 8
    • 8744306298 scopus 로고    scopus 로고
    • QTL mapping of chromosomal regions conferring reproductive frost tolerance in barley (Hordeum vulgare Hordeum vulgare)
    • Reinheimer, J.L., Barr, A.R., and Eglinton, J.K. (2004) QTL mapping of chromosomal regions conferring reproductive frost tolerance in barley (Hordeum vulgare Hordeum vulgare). Theor. Appl. Genet., 109, 1267-1274.
    • (2004) Theor. Appl. Genet , vol.109 , pp. 1267-1274
    • Reinheimer, J.L.1    Barr, A.R.2    Eglinton, J.K.3
  • 10
    • 0032993342 scopus 로고    scopus 로고
    • Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor
    • Kasuga, M., Liu, Q., Miura, S., Yamaguchi-Shinozaki, K., and Shinozaki, K. (1999) Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor. Nat. Biotechnol., 17 (3), 229-230.
    • (1999) Nat. Biotechnol , vol.17 , Issue.3 , pp. 229-230
    • Kasuga, M.1    Liu, Q.2    Miura, S.3    Yamaguchi-shinozaki, K.4    Shinozaki, K.5
  • 12
    • 30144445464 scopus 로고    scopus 로고
    • Abiotic stress: the field environment and stress combination
    • Mittler, R. (2006) Abiotic stress: the field environment and stress combination. Trends Plant Sci., 11 (1), 15-19.
    • (2006) Trends Plant Sci , vol.11 , Issue.1 , pp. 15-19
    • Mittler, R.1
  • 13
    • 1942533606 scopus 로고    scopus 로고
    • When defense pathways collide: the response of Arabidopsis to a combination of drought and heat stress
    • Rizhsky, L., Liang, H., Shuman, J., Shulaev, V., Davletova, S., and Mittler, R. (2004) When defense pathways collide: the response of Arabidopsis to a combination of drought and heat stress. Plant Physiol., 134, 1-14.
    • (2004) Plant Physiol , vol.134 , pp. 1-14
    • Rizhsky, L.1    Liang, H.2    Shuman, J.3    Shulaev, V.4    Davletova, S.5    Mittler, R.6
  • 14
    • 33847240161 scopus 로고    scopus 로고
    • Large-scale expression profiling and physiological characterization of jasmonic acid-mediated adaptation of barley to salinity stress
    • Walia, H., Wilson, C., Condamine, P., Liu, X., Ismail, A.M., and Close, T.J. (2007) Large-scale expression profiling and physiological characterization of jasmonic acid-mediated adaptation of barley to salinity stress. Plant Cell Environ., 30, 410-421.
    • (2007) Plant Cell Environ , vol.30 , pp. 410-421
    • Walia, H.1    Wilson, C.2    Condamine, P.3    Liu, X.4    Ismail, A.M.5    Close, T.J.6
  • 15
    • 33847149667 scopus 로고    scopus 로고
    • Triticeae genomics: advances in sequence analysis of large genome cereal crops
    • Stein, N. (2007) Triticeae genomics: advances in sequence analysis of large genome cereal crops. Chromosome Res., 15, 21-31.
    • (2007) Chromosome Res , vol.15 , pp. 21-31
    • Stein, N.1
  • 17
  • 18
    • 33845764733 scopus 로고    scopus 로고
    • Deciphering the regulatory mechanisms of abiotic stress tolerance in plants by genomic approaches
    • Sreenivasulu, N., Sopory, S.K., and Kavi Kishor, P.B. (2007) Deciphering the regulatory mechanisms of abiotic stress tolerance in plants by genomic approaches. Gene, 388, 1-13.
    • (2007) Gene , vol.388 , pp. 1-13
    • Sreenivasulu, N.1    Sopory, S.K.2    Kishor, K.P.B.3
  • 19
    • 84885831843 scopus 로고
    • In our own hands: a strategy for conserving biological diversity in California, California Policy Seminar Research Report, University of California, Berkeley
    • Jensen, D.B., Torn, M., and Harte, J. (1990) In our own hands: a strategy for conserving biological diversity in California, California Policy Seminar Research Report, University of California, Berkeley.
    • (1990)
    • Jensen, D.B.1    Torn, M.2    Harte, J.3
  • 20
    • 27444439567 scopus 로고    scopus 로고
    • The domestication of cultivated barley
    • in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam
    • von Bothmer, R., Sato, K., Komatsuda, T., Yasuda, S., and Fischbeck, G. (2003) The domestication of cultivated barley, in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam, pp. 3-280.
    • (2003) , pp. 3-280
    • Bothmer, V.R.1    Sato, K.2    Komatsuda, T.3    Yasuda, S.4    Fischbeck, G.5
  • 21
    • 0037805644 scopus 로고    scopus 로고
    • Biotechnological prospects from metagenomics
    • Schloss, P.D. and Handelsman, J. (2003) Biotechnological prospects from metagenomics. Curr. Opin. Biotechnol., 14 (3), 303-310.
    • (2003) Curr. Opin. Biotechnol , vol.14 , Issue.3 , pp. 303-310
    • Schloss, P.D.1    Handelsman, J.2
  • 22
    • 53649106195 scopus 로고    scopus 로고
    • Next-generation DNA sequencing
    • Shendure, J. and Ji, H. (2008) Next-generation DNA sequencing. Nat. Biotechnol., 26, 1135-1145.
    • (2008) Nat. Biotechnol , vol.26 , pp. 1135-1145
    • Shendure, J.1    Ji, H.2
  • 23
    • 72849144434 scopus 로고    scopus 로고
    • Sequencing technologies
    • Metzker, M. (2010) Sequencing technologies. Nat. Rev., 11, 31-46.
    • (2010) Nat. Rev , vol.11 , pp. 31-46
    • Metzker, M.1
  • 24
    • 0030880972 scopus 로고    scopus 로고
    • Seed banks and molecular maps: unlocking genetic potential from the wild
    • Tanksley, S.D. and McCouch, S.R. (1997) Seed banks and molecular maps: unlocking genetic potential from the wild. Science, 277 (5329), 1063-1066.
    • (1997) Science , vol.277 , Issue.5329 , pp. 1063-1066
    • Tanksley, S.D.1    McCouch, S.R.2
  • 25
    • 77957760027 scopus 로고    scopus 로고
    • Ecogeographical diversity: a Vavilovian approach
    • in Development in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam
    • Knupffer, H., Terentyeva, I., Hammer, K., Kovaleva, O., and Sato, K. (2003) Ecogeographical diversity: a Vavilovian approach, in Development in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam, pp. 53-76.
    • (2003) , pp. 53-76
    • Knupffer, H.1    Terentyeva, I.2    Hammer, K.3    Kovaleva, O.4    Sato, K.5
  • 26
    • 84885713536 scopus 로고    scopus 로고
    • Global strategy for the ex situ conservation and use of barley germplasm
    • 2011 Global Crop Diversity Trust, 8 February
    • Global Crop Diversity Trust (2008) Global strategy for the ex situ conservation and use of barley germplasm http://www.croptrust.org/documents/web/Barley_Strategy_FINAL_27Oct08.pdf (8 February 2011).
    • (2008)
  • 27
    • 84885815705 scopus 로고    scopus 로고
    • 8 February
    • http://www.nordgen.org/index.php/en/content/view/full/371 (8 February 2011).
    • (2011)
  • 29
    • 84885701088 scopus 로고    scopus 로고
    • 8 February
    • http://earth.lab.nig.ac.jp/~dclust/cgi-bin/BCC (8 February 2011) .
    • (2011)
  • 30
    • 77957063718 scopus 로고    scopus 로고
    • Summarised diversity: the barley core collection
    • in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam
    • Knupffer, H. and van Hintum, T. (2003) Summarised diversity: the barley core collection, in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam, pp. 259-267.
    • (2003) , pp. 259-267
    • Knupffer, H.1    Hintum, V.T.2
  • 31
    • 0002170826 scopus 로고
    • Origin, evolution, population genetics and resources for breeding of wild barley, Hordeum spontaneum, in the Fertile Crescent
    • in Barley: Genetics, Biochemistry, Molecular Biology and Biotechnology (ed. P.R. Shewry), CAB International, The Alden Press, Oxford
    • Nevo, E. (1992) Origin, evolution, population genetics and resources for breeding of wild barley, Hordeum spontaneum, in the Fertile Crescent, in Barley: Genetics, Biochemistry, Molecular Biology and Biotechnology (ed. P.R. Shewry), CAB International, The Alden Press, Oxford, pp. 19-43.
    • (1992) , pp. 19-43
    • Nevo, E.1
  • 34
    • 78650651107 scopus 로고    scopus 로고
    • Allele mining and sequence diversity at the wheat powdery mildew resistance locus Pm3, in Proceedings of the 11th International Wheat Genetics Symposium
    • (eds R. Appels, R. Eastwood, E. Lagudah, O. Langridge, M. Mackay, and L. McIntyre), Sydney University Press, Sydney
    • Kaur, K., Street, K., Mackay, M., Yahiaoui, N., and Keller, B. (2008) Allele mining and sequence diversity at the wheat powdery mildew resistance locus Pm3, in Proceedings of the 11th International Wheat Genetics Symposium (eds R. Appels, R. Eastwood, E. Lagudah, O. Langridge, M. Mackay, and L. McIntyre), Sydney University Press, Sydney, pp. 1-3.
    • (2008) , pp. 1-3
    • Kaur, K.1    Street, K.2    Mackay, M.3    Yahiaoui, N.4    Keller, B.5
  • 35
    • 35248822115 scopus 로고    scopus 로고
    • Haplotype analysis of vernalization loci in European barley germplasm reveals novel VRN-H1 alleles and a predominant winter VRN-H1/VRN-H2 multi-locus haplotypes
    • Cockram, J., Chiapparino, E., Taylor, S.A., Starnati, K., Donini, P., Laurie, D.A., and O'Sullivan, D.M. (2007) Haplotype analysis of vernalization loci in European barley germplasm reveals novel VRN-H1 alleles and a predominant winter VRN-H1/VRN-H2 multi-locus haplotypes. Theor. Appl. Genet., 115, 993-1001.
    • (2007) Theor. Appl. Genet , vol.115 , pp. 993-1001
    • Cockram, J.1    Chiapparino, E.2    Taylor, S.A.3    Starnati, K.4    Donini, P.5    Laurie, D.A.6    O'Sullivan, D.M.7
  • 36
    • 0034951896 scopus 로고    scopus 로고
    • A mini core subset for capturing diversity and promoting utilization of chickpea genetic resources in crop improvement
    • Upadhyaya, H.D. and Ortiz, R. (2001) A mini core subset for capturing diversity and promoting utilization of chickpea genetic resources in crop improvement. Theor. Appl. Genet., 102 (8), 1292-1298.
    • (2001) Theor. Appl. Genet , vol.102 , Issue.8 , pp. 1292-1298
    • Upadhyaya, H.D.1    Ortiz, R.2
  • 40
    • 56549090030 scopus 로고    scopus 로고
    • Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats
    • Wicker, T., Narechania, A., Sabot, F., Stein, J., Vu, G.T.H., Graner, A., Ware, D., and Stein, N. (2008) Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats. BMC Genomics, 9, 518.
    • (2008) BMC Genomics , vol.9 , pp. 518
    • Wicker, T.1    Narechania, A.2    Sabot, F.3    Stein, J.4    Vu, G.T.H.5    Graner, A.6    Ware, D.7    Stein, N.8
  • 42
    • 69249142634 scopus 로고    scopus 로고
    • A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley
    • Wicker, T., Taudien, S., Houben, A., Keller, B., Graner, A., Platzer, M., and Stein, N. (2009) A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley. Plant J., 59, 712-722.
    • (2009) Plant J , vol.59 , pp. 712-722
    • Wicker, T.1    Taudien, S.2    Houben, A.3    Keller, B.4    Graner, A.5    Platzer, M.6    Stein, N.7
  • 43
    • 0025878507 scopus 로고
    • Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare)
    • Heun, M., Kennedy, A.E., Anderson, J.A., Lapitan, N.L.V., Sorrells, M.E., and Tanksley, S.D. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare). Genome, 34 (3), 437-447.
    • (1991) Genome , vol.34 , Issue.3 , pp. 437-447
    • Heun, M.1    Kennedy, A.E.2    Anderson, J.A.3    Lapitan, N.L.V.4    Sorrells, M.E.5    Tanksley, S.D.6
  • 45
    • 33846834106 scopus 로고    scopus 로고
    • A high-density consensus map of barley to compare the distribution of QTLs for partial resistance of Puccinia hordei and of defence gene homologues
    • Marcel, T.C., Varshney, R.K., Barbieri, M., Jafary, H., de Kock, M.J.D., Graner, A., and Niks, R.E. (2007) A high-density consensus map of barley to compare the distribution of QTLs for partial resistance of Puccinia hordei and of defence gene homologues. Theor. Appl. Genet., 114, 487-500.
    • (2007) Theor. Appl. Genet , vol.114 , pp. 487-500
    • Marcel, T.C.1    Varshney, R.K.2    Barbieri, M.3    Jafary, H.4    Kock, D.M.J.D.5    Graner, A.6    Niks, R.E.7
  • 50
    • 37249073867 scopus 로고    scopus 로고
    • Gene expression quantitative trait locus analysis of 16,000 barley genes reveals a complex pattern of genome-wide transcriptional regulation
    • Potokina, E., Druka, A., Luo, Z., Wise, R., Waugh, R., and Kearsey, M. (2008) Gene expression quantitative trait locus analysis of 16,000 barley genes reveals a complex pattern of genome-wide transcriptional regulation. Plant J., 53, 90-101.
    • (2008) Plant J , vol.53 , pp. 90-101
    • Potokina, E.1    Druka, A.2    Luo, Z.3    Wise, R.4    Waugh, R.5    Kearsey, M.6
  • 51
    • 84885765690 scopus 로고    scopus 로고
    • ESTdevelopment in barley from a cold-induced cDNA library
    • 9th ITMI International Triticeae Mapping Initiative Meeting, August 24-28, Viterbo.
    • Pecchioni, N. (1999) ESTdevelopment in barley from a cold-induced cDNA library. 9th ITMI International Triticeae Mapping Initiative Meeting, August 24-28, Viterbo.
    • (1999)
    • Pecchioni, N.1
  • 56
    • 68349151220 scopus 로고    scopus 로고
    • A high-density transcript linkage map of barley derived from a single population
    • Sato, K., Nankaku, N., and Takeda, K. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity, 103, 110-117.
    • (2009) Heredity , vol.103 , pp. 110-117
    • Sato, K.1    Nankaku, N.2    Takeda, K.3
  • 60
    • 0033711956 scopus 로고    scopus 로고
    • A bacterial artificial chromosome library for barley (Hordeum vulgare Hordeum vulgare) and the identification of clones containing putative resistance genes
    • Yu, Y., Tomkins, J.P., Waugh, R., Frisch, D.A., Kudrna, D., Kleinhofs, A., Brueggeman, R.S., Muehlbauer, G.J., Wise, R.P., and Wing, R.A. (2000) A bacterial artificial chromosome library for barley (Hordeum vulgare Hordeum vulgare) and the identification of clones containing putative resistance genes. Theor. Appl. Genet., 101, 1093-1099.
    • (2000) Theor. Appl. Genet , vol.101 , pp. 1093-1099
    • Yu, Y.1    Tomkins, J.P.2    Waugh, R.3    Frisch, D.A.4    Kudrna, D.5    Kleinhofs, A.6    Brueggeman, R.S.7    Muehlbauer, G.J.8    Wise, R.P.9    Wing, R.A.10
  • 62
    • 33947242310 scopus 로고    scopus 로고
    • Construction and characterization of a bacterial artificial chromosome (BAC) library from the Japanese malting barley variety "Haruna Nijo"
    • Saisho, D., Myoraku, E., Kawasaki, S., Sato, K., and Takeda, K. (2007) Construction and characterization of a bacterial artificial chromosome (BAC) library from the Japanese malting barley variety "Haruna Nijo". Breeding Sci., 57, 29-38.
    • (2007) Breeding Sci , vol.57 , pp. 29-38
    • Saisho, D.1    Myoraku, E.2    Kawasaki, S.3    Sato, K.4    Takeda, K.5
  • 63
    • 77954447980 scopus 로고    scopus 로고
    • Construction of a barley bacterial artificial chromosome library suitable for cloning genes for boron tolerance, sodium exclusion and high grain zinc content
    • Shi, B.J., Sutton, T., Collins, N.C., Pallotta, M., and Langridge, P. (2010) Construction of a barley bacterial artificial chromosome library suitable for cloning genes for boron tolerance, sodium exclusion and high grain zinc content. Plant Breed., 129, 291-296.
    • (2010) Plant Breed , vol.129 , pp. 291-296
    • Shi, B.J.1    Sutton, T.2    Collins, N.C.3    Pallotta, M.4    Langridge, P.5
  • 64
    • 33644775672 scopus 로고    scopus 로고
    • Transcriptome analysis and physical mapping of barley genes in wheat: barley chromosome addition lines
    • Cho, S., Garvin, D.F., and Muehlbauer, G.J. (2006) Transcriptome analysis and physical mapping of barley genes in wheat: barley chromosome addition lines. Genetics, 172, 1277-1285.
    • (2006) Genetics , vol.172 , pp. 1277-1285
    • Cho, S.1    Garvin, D.F.2    Muehlbauer, G.J.3
  • 66
    • 33846668211 scopus 로고    scopus 로고
    • An improved method to identify BAC clones using pooled Overgos
    • doi: 10.1093/nar/gkl920
    • Madishetty, K., Condamine, P., Svensson, J.T., Rodriguez, E., and Close, T.J. (2007) An improved method to identify BAC clones using pooled Overgos. Nucleic Acids Res., 35 (1), e5. doi: 10.1093/nar/gkl920
    • (2007) Nucleic Acids Res , vol.35 , Issue.1
    • Madishetty, K.1    Condamine, P.2    Svensson, J.T.3    Rodriguez, E.4    Close, T.J.5
  • 67
    • 84885831972 scopus 로고    scopus 로고
    • 8 February
    • http://www.ipk-gatersleben.de/Internet/Forschung/Projekte/Barley (8 February 2011) .
    • (2011)
  • 72
    • 77952637117 scopus 로고    scopus 로고
    • Brachypodium distachyon genomics for sustainable food and fuel production
    • Bevan, M.W., Garvin, D.F., and Vogel, J.P. (2010) Brachypodium distachyon genomics for sustainable food and fuel production. Curr. Opin. Biotechnol., 21, 211-217.
    • (2010) Curr. Opin. Biotechnol , vol.21 , pp. 211-217
    • Bevan, M.W.1    Garvin, D.F.2    Vogel, J.P.3
  • 73
    • 76749150030 scopus 로고    scopus 로고
    • Genome sequencing and analysis of the model grass Brachypodium distachyon
    • The International Brachypodium Initiative
    • The International Brachypodium Initiative (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, 463, 763-768.
    • (2010) Nature , vol.463 , pp. 763-768
  • 75
    • 85056029481 scopus 로고    scopus 로고
    • Brachypodium distachyon: a new model system for structural and functional analysis of grass genomes
    • , in Model Plants and Crop Improvement(eds R.K. Varshney and R.M.D. Koebner), CRC Press, Boca Raton
    • Garvin, D.F. (2007) Brachypodium distachyon: a new model system for structural and functional analysis of grass genomes , in Model Plants and Crop Improvement(eds R.K. Varshney and R.M.D. Koebner), CRC Press, Boca Raton, pp. 109-124.
    • (2007) , pp. 109-124
    • Garvin, D.F.1
  • 76
    • 41549089817 scopus 로고    scopus 로고
    • Highefficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3
    • Vogel, J.P. and Hill, T. (2008) Highefficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3. Plant Cell Rep., 27, 471-478.
    • (2008) Plant Cell Rep , vol.27 , pp. 471-478
    • Vogel, J.P.1    Hill, T.2
  • 77
    • 57049155443 scopus 로고    scopus 로고
    • Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR
    • Hong, S.J., Seo, P.J., Yang, M.S., Xiang, F., and Park, C.M. (2008) Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR. BMC Plant Biol., 8, 112.
    • (2008) BMC Plant Biol , vol.8 , pp. 112
    • Hong, S.J.1    Seo, P.J.2    Yang, M.S.3    Xiang, F.4    Park, C.M.5
  • 78
    • 78650063761 scopus 로고    scopus 로고
    • Natural variation of drought response in Brachypodium distachyon
    • Luo, N., Liua, J., Yub, X., and Jiang, Y. (2011) Natural variation of drought response in Brachypodium distachyon. Physiol. Plant., 141, 19-29.
    • (2011) Physiol. Plant , vol.141 , pp. 19-29
    • Luo, N.1    Liua, J.2    Yub, X.3    Jiang, Y.4
  • 80
    • 0035058382 scopus 로고    scopus 로고
    • Transposons as tools for functional genomics
    • Ramachandran, S. and Sundaresan, V. (2001) Transposons as tools for functional genomics. Plant Physiol. Biochem., 39 (3-4), 243-252.
    • (2001) Plant Physiol. Biochem , vol.39 , Issue.3 , pp. 243-252
    • Ramachandran, S.1    Sundaresan, V.2
  • 82
    • 33645127973 scopus 로고    scopus 로고
    • Genetic transformation of barley (Hordeum vulgare Hordeum vulgare) via infection of androgenetic pollen cultures with Agrobacterium tumefaciens
    • Kumlehn, J., Serazetdinova, L., Hensel, G., Becker, D., and Loerz, H. (2006) Genetic transformation of barley (Hordeum vulgare Hordeum vulgare) via infection of androgenetic pollen cultures with Agrobacterium tumefaciens. Plant Biotechnol. J., 4 (2), 251-261.
    • (2006) Plant Biotechnol. J , vol.4 , Issue.2 , pp. 251-261
    • Kumlehn, J.1    Serazetdinova, L.2    Hensel, G.3    Becker, D.4    Loerz, H.5
  • 83
    • 0033758490 scopus 로고    scopus 로고
    • An efficient method for dispersing Ds elements in the barley genome as a tool for determining gene function
    • Koprek, T., McElroy, D., Louwerse, J., Williams-Carrier, R., and Lemaux, P.G. (2000) An efficient method for dispersing Ds elements in the barley genome as a tool for determining gene function. Plant J., 24, 253-263.
    • (2000) Plant J , vol.24 , pp. 253-263
    • Koprek, T.1    McElroy, D.2    Louwerse, J.3    Williams-carrier, R.4    Lemaux, P.G.5
  • 84
    • 0035145759 scopus 로고    scopus 로고
    • Transposition of the maize transposable element Ac in barley (Hordeum vulgare Hordeum vulgare)
    • Scholz, S., Lorz, H., and Lutticke, S. (2001) Transposition of the maize transposable element Ac in barley (Hordeum vulgare Hordeum vulgare). Mol. Genet. Genomics, 264, 653-661.
    • (2001) Mol. Genet. Genomics , vol.264 , pp. 653-661
    • Scholz, S.1    Lorz, H.2    Lutticke, S.3
  • 85
    • 77952903335 scopus 로고    scopus 로고
    • Genomics and bioinformatics resources for crop improvement
    • Mochida, K. and Shinozaki, K. (2010) Genomics and bioinformatics resources for crop improvement. Plant Cell Physiol., 51 (4), 497-523.
    • (2010) Plant Cell Physiol , vol.51 , Issue.4 , pp. 497-523
    • Mochida, K.1    Shinozaki, K.2
  • 87
    • 33750916343 scopus 로고    scopus 로고
    • High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals
    • Singh, J., Zhang, S., Chen, C., Cooper, L., Bregitzer, P., Sturbaum, A., Hayes, P.M., and Lemaux, P.G. (2006) High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals. Plant Mol. Biol., 62, 937-950.
    • (2006) Plant Mol. Biol , vol.62 , pp. 937-950
    • Singh, J.1    Zhang, S.2    Chen, C.3    Cooper, L.4    Bregitzer, P.5    Sturbaum, A.6    Hayes, P.M.7    Lemaux, P.G.8
  • 89
    • 20444438026 scopus 로고    scopus 로고
    • Abiotic stress tolerance in grasses: from model plants to crop plants
    • Tester, M. and Bacic, A. (2005) Abiotic stress tolerance in grasses: from model plants to crop plants. Plant Physiol., 137, 791-793.
    • (2005) Plant Physiol , vol.137 , pp. 791-793
    • Tester, M.1    Bacic, A.2
  • 90
    • 17044385046 scopus 로고    scopus 로고
    • Recent advances in engineering plant tolerance to abiotic stress: achievements and limitations
    • Vinocur, B. and Altman, A. (2005) Recent advances in engineering plant tolerance to abiotic stress: achievements and limitations. Curr. Opin. Biotechnol., 16, 123-132.
    • (2005) Curr. Opin. Biotechnol , vol.16 , pp. 123-132
    • Vinocur, B.1    Altman, A.2
  • 93
    • 0030021536 scopus 로고    scopus 로고
    • Expression of a late embryogenesis abundant protein gene, HVA1, from barley confers tolerance to water deficit and salt stress in transgenic rice
    • Xu, D., Duna, X., Wang, B., Hong, B., Ho, T.H.D., and Wu, R. (1996) Expression of a late embryogenesis abundant protein gene, HVA1, from barley confers tolerance to water deficit and salt stress in transgenic rice. Plant Physiol., 110 (1), 249-257.
    • (1996) Plant Physiol , vol.110 , Issue.1 , pp. 249-257
    • Xu, D.1    Duna, X.2    Wang, B.3    Hong, B.4    Ho, T.H.D.5    Wu, R.6
  • 94
    • 1542291159 scopus 로고    scopus 로고
    • HVA1, a LEA gene from barley confers dehydration tolerance in transgenic rice (Oryza sativa Oryza sativa) via cell membrane protection
    • Babu, R.C., Zhang, J., Blum, A., Ho, T.H.D., We, R., and Nguyen, H.T. (2004) HVA1, a LEA gene from barley confers dehydration tolerance in transgenic rice (Oryza sativa Oryza sativa) via cell membrane protection. Plant Sci., 166, 855-862.
    • (2004) Plant Sci , vol.166 , pp. 855-862
    • Babu, R.C.1    Zhang, J.2    Blum, A.3    Ho, T.H.D.4    We, R.5    Nguyen, H.T.6
  • 95
    • 34547584433 scopus 로고    scopus 로고
    • Expression of barley HvCBF4 enhances tolerance to abiotic stress in transgenic rice
    • Oh, S.J., Kwon, C.W., Choi, D.W., Song, S.L., and Kim, J.K. (2007) Expression of barley HvCBF4 enhances tolerance to abiotic stress in transgenic rice. Plant Biotechnol. J., 5 (5), 646-656.
    • (2007) Plant Biotechnol. J , vol.5 , Issue.5 , pp. 646-656
    • Oh, S.J.1    Kwon, C.W.2    Choi, D.W.3    Song, S.L.4    Kim, J.K.5
  • 96
    • 33845777956 scopus 로고    scopus 로고
    • Protein polyubiquitination plays a role in basal host resistance of barley
    • Dong, W., Nowara, D., and Schweizer, P. (2006) Protein polyubiquitination plays a role in basal host resistance of barley. Plant Cell, 18, 3321-3331.
    • (2006) Plant Cell , vol.18 , pp. 3321-3331
    • Dong, W.1    Nowara, D.2    Schweizer, P.3
  • 98
    • 23044467579 scopus 로고    scopus 로고
    • A high-throughput gene-silencing system for the functional assessment of defense related genes in barley epidermal cells
    • Douchkov, D., Nowara, D., Zierold, U., and Schweizer, P. (2005) A high-throughput gene-silencing system for the functional assessment of defense related genes in barley epidermal cells. Mol. Plant Microbe Interact., 18, 755-761.
    • (2005) Mol. Plant Microbe Interact , vol.18 , pp. 755-761
    • Douchkov, D.1    Nowara, D.2    Zierold, U.3    Schweizer, P.4
  • 99
    • 51749084690 scopus 로고    scopus 로고
    • A transient assay system for the assessment of cell autonomous gene function in dehydration-stressed barley
    • Marzin, S., Mihaly, R., Pauk, J., and Schweizer, P. (2008) A transient assay system for the assessment of cell autonomous gene function in dehydration-stressed barley. J. Exp. Bot., 59 (12), 3359-3369.
    • (2008) J. Exp. Bot , vol.59 , Issue.12 , pp. 3359-3369
    • Marzin, S.1    Mihaly, R.2    Pauk, J.3    Schweizer, P.4
  • 100
    • 61449224743 scopus 로고    scopus 로고
    • An Ac/ Ds-mediated gene trap system for functional genomics in barley
    • Lazarow, K. and Lutticke, S. (2009) An Ac/ Ds-mediated gene trap system for functional genomics in barley. BMC Genomics, 10, 55.
    • (2009) BMC Genomics , vol.10 , pp. 55
    • Lazarow, K.1    Lutticke, S.2
  • 101
    • 4844222798 scopus 로고    scopus 로고
    • The potential of virus-induced gene silencing for speeding up the functional characterization of plant genes
    • Vagner, A.B., Visser, P.B., Angenent, G.C., and Krens, F.A. (2004) The potential of virus-induced gene silencing for speeding up the functional characterization of plant genes. Genet. Mol. Res., 3 (3), 323-341.
    • (2004) Genet. Mol. Res , vol.3 , Issue.3 , pp. 323-341
    • Vagner, A.B.1    Visser, P.B.2    Angenent, G.C.3    Krens, F.A.4
  • 102
    • 0032716844 scopus 로고    scopus 로고
    • Homology dependent gene silencing in plants and fungi: a number of variations on the same theme
    • Cogoni, C. and Macino, G. (1999) Homology dependent gene silencing in plants and fungi: a number of variations on the same theme. Curr. Opin. Microbiol., 2 (6), 657-662.
    • (1999) Curr. Opin. Microbiol , vol.2 , Issue.6 , pp. 657-662
    • Cogoni, C.1    Macino, G.2
  • 104
    • 0001412080 scopus 로고    scopus 로고
    • A single copy of a virus-derived transgene encoding hairpin RNA gives immunity to barley yellow dwarf virus
    • Wang, M.B., Abbott, D.C., and Waterhouse, P.M. (2000) A single copy of a virus-derived transgene encoding hairpin RNA gives immunity to barley yellow dwarf virus. Mol. Plant Pathol., 1 (6), 347-356.
    • (2000) Mol. Plant Pathol , vol.1 , Issue.6 , pp. 347-356
    • Wang, M.B.1    Abbott, D.C.2    Waterhouse, P.M.3
  • 105
    • 0038706305 scopus 로고    scopus 로고
    • A chemical-regulated inducible RNAi system in plants
    • Guo, H.S., Fei, J.F., Xie, Q., and Chua, N.H. (2003) A chemical-regulated inducible RNAi system in plants. Plant J., 34, 383-392.
    • (2003) Plant J , vol.34 , pp. 383-392
    • Guo, H.S.1    Fei, J.F.2    Xie, Q.3    Chua, N.H.4
  • 106
    • 0038806468 scopus 로고    scopus 로고
    • Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis
    • Hiratsu, K., Matsui, K., Koyama, T., and Ohme-Takagi, M. (2003) Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis. Plant J., 34, 733-739.
    • (2003) Plant J , vol.34 , pp. 733-739
    • Hiratsu, K.1    Matsui, K.2    Koyama, T.3    Ohme-takagi, M.4
  • 107
    • 45149112228 scopus 로고    scopus 로고
    • A novel NAC transcription factor, IDEF2, that recognizes the iron deficiency-responsive element 2 regulates the genes involved in iron homeostasis in plants
    • Ogo, Y., Kobayashi, T., Nakanishi Itai, R., Nakanishi, H., Kakei, Y., Takahashi, M., Toki, S., Mori, S., and Nishizawa, N.K. (2008) A novel NAC transcription factor, IDEF2, that recognizes the iron deficiency-responsive element 2 regulates the genes involved in iron homeostasis in plants. J. Biol. Chem., 283 (19), 13407-13417.
    • (2008) J. Biol. Chem , vol.283 , Issue.19 , pp. 13407-13417
    • Ogo, Y.1    Kobayashi, T.2    Itai, N.R.3    Nakanishi, H.4    Kakei, Y.5    Takahashi, M.6    Toki, S.7    Mori, S.8    Nishizawa, N.K.9
  • 108
    • 78149497123 scopus 로고    scopus 로고
    • Natural variation in the freezing tolerance of Arabidopsis thaliana: effects of RNAi-induced CBF depletion and QTL localisation vary among accessions
    • Gery, C., Zuther, E., Schulz, E., Legoupi, J., Chauveau, A., McKhann, H., Hincha, D.K., and Téoulé, E. (2011) Natural variation in the freezing tolerance of Arabidopsis thaliana: effects of RNAi-induced CBF depletion and QTL localisation vary among accessions. Plant Sci., 180, 12-23.
    • (2011) Plant Sci , vol.180 , pp. 12-23
    • Gery, C.1    Zuther, E.2    Schulz, E.3    Legoupi, J.4    Chauveau, A.5    McKhann, H.6    Hincha, D.K.7    Téoulé, E.8
  • 109
    • 77952664598 scopus 로고    scopus 로고
    • Virus induced gene silencing in Brachypodium distachyon: a model organism for cereals
    • Demircan, T. and Akkaya, M.S. (2010) Virus induced gene silencing in Brachypodium distachyon: a model organism for cereals. Plant Cell Tissue Organ Cult., 100, 91-96.
    • (2010) Plant Cell Tissue Organ Cult , vol.100 , pp. 91-96
    • Demircan, T.1    Akkaya, M.S.2
  • 110
    • 0036112232 scopus 로고    scopus 로고
    • Barley stripe mosaic virus-induced gene silencing in a monocot plant
    • Holzberg, S., Brosio, P., Gross, C., and Pogue, G.P. (2002) Barley stripe mosaic virus-induced gene silencing in a monocot plant. Plant J., 30, 315-327.
    • (2002) Plant J , vol.30 , pp. 315-327
    • Holzberg, S.1    Brosio, P.2    Gross, C.3    Pogue, G.P.4
  • 111
    • 34548444552 scopus 로고    scopus 로고
    • Virus-induced gene silencing of P23k in barley leaf reveals morphological changes involved in secondary wall formation
    • Oikawa, A., Rahman, A., Yamashita, T., Taira, H., and Kidou, S. (2007) Virus-induced gene silencing of P23k in barley leaf reveals morphological changes involved in secondary wall formation. J. Exp. Bot., 58, 2617-2625.
    • (2007) J. Exp. Bot , vol.58 , pp. 2617-2625
    • Oikawa, A.1    Rahman, A.2    Yamashita, T.3    Taira, H.4    Kidou, S.5
  • 113
    • 5144232519 scopus 로고    scopus 로고
    • A structured mutant population for forward and reverse genetics in barley (Hordeum vulgare Hordeum vulgare)
    • Caldwell, D.G., McCallum, N., Shaw, P., Muehlbauer, G.J., Marshall, D.F., and Waugh, R. (2004) A structured mutant population for forward and reverse genetics in barley (Hordeum vulgare Hordeum vulgare). Plant J., 40 (1), 143-150.
    • (2004) Plant J , vol.40 , Issue.1 , pp. 143-150
    • Caldwell, D.G.1    McCallum, N.2    Shaw, P.3    Muehlbauer, G.J.4    Marshall, D.F.5    Waugh, R.6
  • 114
    • 77049093783 scopus 로고    scopus 로고
    • TILLING in the two-rowed barley cultivar "Barke" reveals preferred sites of functional diversity in the gene HvHox1
    • Gottwald, S., Bauer, P., Komatsuda, T., Lundqvist, U., and Stein, N. (2009) TILLING in the two-rowed barley cultivar "Barke" reveals preferred sites of functional diversity in the gene HvHox1. BMC Res. Note, 2, 258.
    • (2009) BMC Res. Note , vol.2 , pp. 258
    • Gottwald, S.1    Bauer, P.2    Komatsuda, T.3    Lundqvist, U.4    Stein, N.5
  • 115
    • 84885780841 scopus 로고    scopus 로고
    • 8 February
    • http://www.distagenomics.unibo.it/TILLMore/ (8 February 2011) .
    • (2011)
  • 118
    • 57749195712 scopus 로고    scopus 로고
    • RNA-seq: a revolutionary tool for transcriptomics
    • Wang, Z., Gerstein, M., and Snyder, M. (2009) RNA-seq: a revolutionary tool for transcriptomics. Nat. Rev., 10, 57-63.
    • (2009) Nat. Rev , vol.10 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 119
    • 77951998724 scopus 로고    scopus 로고
    • Exploring plant transcriptomes using ultra high-throughput sequencing
    • Wang, L., Li, P., and Brutnell, P. (2010) Exploring plant transcriptomes using ultra high-throughput sequencing. Brief. Funct. Genomics, 9 (2), 118-128.
    • (2010) Brief. Funct. Genomics , vol.9 , Issue.2 , pp. 118-128
    • Wang, L.1    Li, P.2    Brutnell, P.3
  • 121
    • 40549133868 scopus 로고    scopus 로고
    • BarleyBase/PLEXdb: a unified expression profiling database for plants and plant pathogens
    • in Plant Bioinformatics: Methods and Protocols (ed. D. Edwards), Methods in Molecular Biology, Humana Press, Totowa
    • Wise, R., Caldo, R., Hong, L., Shen, L., Cannon, E., and Dickerson, J. (2007) BarleyBase/PLEXdb: a unified expression profiling database for plants and plant pathogens, in Plant Bioinformatics: Methods and Protocols (ed. D. Edwards), Methods in Molecular Biology, Humana Press, Totowa, pp. 347-363.
    • (2007) , pp. 347-363
    • Wise, R.1    Caldo, R.2    Hong, L.3    Shen, L.4    Cannon, E.5    Dickerson, J.6
  • 124
    • 33847626433 scopus 로고    scopus 로고
    • Identification of transcripts potentially involved in barley seed germination and dormancy using cDNA-AFLP
    • Leymarie, J., Bruneaux, E., Gibot-Leclerc, S., and Corbineau, F. (2007) Identification of transcripts potentially involved in barley seed germination and dormancy using cDNA-AFLP. J. Exp. Bot., 58 (3), 425-437.
    • (2007) J. Exp. Bot , vol.58 , Issue.3 , pp. 425-437
    • Leymarie, J.1    Bruneaux, E.2    Gibot-leclerc, S.3    Corbineau, F.4
  • 127
    • 34548128406 scopus 로고    scopus 로고
    • SNP discovery via 454 transcriptome sequencing
    • Barbazuk, W.B., Emrich, S.J., Chen, H.D., Li, L., and Schnable, P.S. (2007) SNP discovery via 454 transcriptome sequencing. Plant J., 51 (5), 910-918.
    • (2007) Plant J , vol.51 , Issue.5 , pp. 910-918
    • Barbazuk, W.B.1    Emrich, S.J.2    Chen, H.D.3    Li, L.4    Schnable, P.S.5
  • 128
    • 34250666153 scopus 로고    scopus 로고
    • Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing
    • Weber, A.P.M., Weber, K.L., Carr, K., Wilkerson, C., and Ohlrogge, J.B. (2007) Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing. Plant Physiol., 144, 32-42.
    • (2007) Plant Physiol , vol.144 , pp. 32-42
    • Weber, A.P.M.1    Weber, K.L.2    Carr, K.3    Wilkerson, C.4    Ohlrogge, J.B.5
  • 129
    • 33751017957 scopus 로고    scopus 로고
    • Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology
    • Cheung, F., Haas, B.J., Goldberg, S.M., May, G.D., Xiao, Y., and Town, C.D. (2006) Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology. BMC Genomics, 7, 272.
    • (2006) BMC Genomics , vol.7 , pp. 272
    • Cheung, F.1    Haas, B.J.2    Goldberg, S.M.3    May, G.D.4    Xiao, Y.5    Town, C.D.6
  • 132
    • 84866170116 scopus 로고    scopus 로고
    • Challenges and strategies for next generation sequencing (NGS) data analysis
    • Thakur, V. and Varshney, R. (2010) Challenges and strategies for next generation sequencing (NGS) data analysis. J. Comput. Sci. Syst. Biol., 3 (2), 40-42.
    • (2010) J. Comput. Sci. Syst. Biol , vol.3 , Issue.2 , pp. 40-42
    • Thakur, V.1    Varshney, R.2
  • 133
    • 84885707581 scopus 로고    scopus 로고
    • 8 February
    • http://www.public.iastate.edu/~imagefpc/IBSC%20Webpage/IBSC%20Template-publications.html (8 February 2011) .
    • (2011)
  • 134
    • 0035696449 scopus 로고    scopus 로고
    • Expressed sequence tags from cold-acclimatized barley can identify novel plant genes
    • Faccioli, P., Pecchioni, N., Cattivelli, L., Stanca, A.M., and Terzi, V. (2001) Expressed sequence tags from cold-acclimatized barley can identify novel plant genes. Plant Breed., 120, 497-502.
    • (2001) Plant Breed , vol.120 , pp. 497-502
    • Faccioli, P.1    Pecchioni, N.2    Cattivelli, L.3    Stanca, A.M.4    Terzi, V.5
  • 135
    • 18744375994 scopus 로고    scopus 로고
    • Analysis of differential expression of barley ESTs during cold acclimatization using microarray technology
    • Faccioli, P., Lagonigro, M.S., De Checco, L., Stanca, A.M., Alberici, R., and Terzi, V. (2002) Analysis of differential expression of barley ESTs during cold acclimatization using microarray technology. Plant Biol., 4, 630-639.
    • (2002) Plant Biol , vol.4 , pp. 630-639
    • Faccioli, P.1    Lagonigro, M.S.2    Checco, D.L.3    Stanca, A.M.4    Alberici, R.5    Terzi, V.6
  • 136
    • 4644250562 scopus 로고    scopus 로고
    • Large scale analysis of transcripts abundance in barley subjected to several single and combined abiotic stress conditions
    • Atienza, S.G., Faccioli, P., Perrotta, G., Dalfino, G., Zschiesche, W., Humbeck, K., Stanca, A.M., and Cattivelli, L. (2004) Large scale analysis of transcripts abundance in barley subjected to several single and combined abiotic stress conditions. Plant Sci., 167, 1359-1365.
    • (2004) Plant Sci , vol.167 , pp. 1359-1365
    • Atienza, S.G.1    Faccioli, P.2    Perrotta, G.3    Dalfino, G.4    Zschiesche, W.5    Humbeck, K.6    Stanca, A.M.7    Cattivelli, L.8
  • 137
    • 52349092299 scopus 로고    scopus 로고
    • Dehydrin gene expression provides an indicator of low temperature and drought stress: transcriptome-based analysis of barley (Hordeum vulgare Hordeum vulgare)
    • Tommasini, L., Svensson, J.T., Rodriguez, E.M., Wahid, A., Malatrasi, M., Kato, K., Wanamaker, S., Resnik, J., and Close, T.J. (2008) Dehydrin gene expression provides an indicator of low temperature and drought stress: transcriptome-based analysis of barley (Hordeum vulgare Hordeum vulgare). Funct. Integr. Genomics, 8, 387-405.
    • (2008) Funct. Integr. Genomics , vol.8 , pp. 387-405
    • Tommasini, L.1    Svensson, J.T.2    Rodriguez, E.M.3    Wahid, A.4    Malatrasi, M.5    Kato, K.6    Wanamaker, S.7    Resnik, J.8    Close, T.J.9
  • 138
    • 0037322989 scopus 로고    scopus 로고
    • Cor gene expression in barley mutants affected in chloroplast development and photosynthetic electron transport
    • Dal Bosco, C., Busconi, M., Govoni, C., Baldi, P., Stanca, A.M., Crosatti, C., Bassi, R., and Cattivelli, L. (2003) Cor gene expression in barley mutants affected in chloroplast development and photosynthetic electron transport. Plant Physiol., 131, 793-802.
    • (2003) Plant Physiol , vol.131 , pp. 793-802
    • Bosco, D.C.1    Busconi, M.2    Govoni, C.3    Baldi, P.4    Stanca, A.M.5    Crosatti, C.6    Bassi, R.7    Cattivelli, L.8
  • 140
    • 33846837504 scopus 로고    scopus 로고
    • Barley transcript profiles under dehydration shock and drought stress treatments: a comparative analysis
    • Talamè, V., Ozturk, N.Z., Bohnert, H.J., and Tuberosa, R. (2007) Barley transcript profiles under dehydration shock and drought stress treatments: a comparative analysis. J. Exp. Bot., 58 (2), 229-240.
    • (2007) J. Exp. Bot , vol.58 , Issue.2 , pp. 229-240
    • Talamè, V.1    Ozturk, N.Z.2    Bohnert, H.J.3    Tuberosa, R.4
  • 142
    • 36448995026 scopus 로고    scopus 로고
    • The barley microarray: a community vision and application to abiotic stress
    • Close, T.J. (2005) The barley microarray: a community vision and application to abiotic stress. Czech J. Genet. Plant Breed., 41 (4), 144-152.
    • (2005) Czech J. Genet. Plant Breed , vol.41 , Issue.4 , pp. 144-152
    • Close, T.J.1
  • 143
    • 34247201682 scopus 로고    scopus 로고
    • Identification of a novel gene (Hsdr4) involved in water-stress tolerance in wild barley
    • Suprunova, T., Krugman, T., Distelfeld, A., Fahima, T., Nevo, E., and Korol, A. (2007) Identification of a novel gene (Hsdr4) involved in water-stress tolerance in wild barley. Plant Mol. Biol., 64, 17-34.
    • (2007) Plant Mol. Biol , vol.64 , pp. 17-34
    • Suprunova, T.1    Krugman, T.2    Distelfeld, A.3    Fahima, T.4    Nevo, E.5    Korol, A.6
  • 144
    • 67649531708 scopus 로고    scopus 로고
    • Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage
    • Guo, P., Baum, M., Grando, S., Ceccarelli, S., Bai, G., Li, R., von Korff, M., Graner, A., and Valcoun, J. (2009) Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage. J. Exp. Bot., 60, 3531-3544.
    • (2009) J. Exp. Bot , vol.60 , pp. 3531-3544
    • Guo, P.1    Baum, M.2    Grando, S.3    Ceccarelli, S.4    Bai, G.5    Li, R.6    Korff, V.M.7    Graner, A.8    Valcoun, J.9
  • 145
    • 77955925113 scopus 로고    scopus 로고
    • Drought response in the spikes of barley: gene expression in the lemma, palea, awn, and seed
    • Abebe, T., Melmaiee, K., Berg, V., and Wise, R.P. (2010) Drought response in the spikes of barley: gene expression in the lemma, palea, awn, and seed. Funct. Integr. Genomics, 10, 191-205.
    • (2010) Funct. Integr. Genomics , vol.10 , pp. 191-205
    • Abebe, T.1    Melmaiee, K.2    Berg, V.3    Wise, R.P.4
  • 146
    • 23044534092 scopus 로고    scopus 로고
    • Analysis of salt-inducible genes in barley roots by differential display
    • Ueda, A., Shi, W., Nakamura, T., and Takabe, T. (2002) Analysis of salt-inducible genes in barley roots by differential display. J. Plant Res., 115, 119-130.
    • (2002) J. Plant Res , vol.115 , pp. 119-130
    • Ueda, A.1    Shi, W.2    Nakamura, T.3    Takabe, T.4
  • 147
    • 5144227438 scopus 로고    scopus 로고
    • Osmotic stress in barley regulates expression of a different set of genes than salt stress does
    • Ueda, A., Kathiresan, A., Inada, M., Narita, Y., Nakamura, T., Shi, W., Takabe, T., and Bennett, J. (2004) Osmotic stress in barley regulates expression of a different set of genes than salt stress does. J. Exp. Bot., 55 (406), 2213-2218.
    • (2004) J. Exp. Bot , vol.55 , Issue.406 , pp. 2213-2218
    • Ueda, A.1    Kathiresan, A.2    Inada, M.3    Narita, Y.4    Nakamura, T.5    Shi, W.6    Takabe, T.7    Bennett, J.8
  • 148
    • 33644533829 scopus 로고    scopus 로고
    • Expression analysis of barley (Hordeum vulgare Hordeum vulgare) during salinity stress
    • Walia, H., Wilson, C., Wahid, A., Condamine, P., Cui, X., and Close, T.J. (2006) Expression analysis of barley (Hordeum vulgare Hordeum vulgare) during salinity stress. Funct. Integr. Genomics, 6, 143-156.
    • (2006) Funct. Integr. Genomics , vol.6 , pp. 143-156
    • Walia, H.1    Wilson, C.2    Wahid, A.3    Condamine, P.4    Cui, X.5    Close, T.J.6
  • 150
    • 29144527032 scopus 로고    scopus 로고
    • Improving salt tolerance of wheat and barley: future prospects
    • Colmer, T.D., Munns, R., and Flowers, T.J. (2005) Improving salt tolerance of wheat and barley: future prospects. Aust. J. Exp. Agr., 45, 1425-1443.
    • (2005) Aust. J. Exp. Agr , vol.45 , pp. 1425-1443
    • Colmer, T.D.1    Munns, R.2    Flowers, T.J.3
  • 151
    • 33645558534 scopus 로고    scopus 로고
    • Comparative transcriptome analyses of barley and rice under salt stress
    • Ueda, A., Kathiresan, A., Bennett, J., and Takabe, T. (2006) Comparative transcriptome analyses of barley and rice under salt stress. Theor. Appl. Genet., 112, 1286-1294.
    • (2006) Theor. Appl. Genet , vol.112 , pp. 1286-1294
    • Ueda, A.1    Kathiresan, A.2    Bennett, J.3    Takabe, T.4
  • 152
    • 70349575391 scopus 로고    scopus 로고
    • Comparing genomic expression patterns across plant species reveals highly diverged transcriptional dynamics in response to salt stress
    • Walia, H., Wilson, C., Ismail, A.M., Close, T.J., and Cui, X. (2009) Comparing genomic expression patterns across plant species reveals highly diverged transcriptional dynamics in response to salt stress. BMC Genomics, 10, 398.
    • (2009) BMC Genomics , vol.10 , pp. 398
    • Walia, H.1    Wilson, C.2    Ismail, A.M.3    Close, T.J.4    Cui, X.5
  • 153
    • 4244168125 scopus 로고    scopus 로고
    • Altered nitrogen metabolism under environmental stress conditions, in Handbook of Plant and Crop Stress, 2nd edn
    • (ed. M. Pessarakli), Marcel Dekker Inc., New York
    • Rabie, E. (1999) Altered nitrogen metabolism under environmental stress conditions, in Handbook of Plant and Crop Stress, 2nd edn (ed. M. Pessarakli), Marcel Dekker Inc., New York, pp. 349-363.
    • (1999) , pp. 349-363
    • Rabie, E.1
  • 154
    • 0033831570 scopus 로고    scopus 로고
    • Genomic analysis of a nutrient response in Arabidopsis reveals diverse expression patterns and novel metabolic and potential regulatory genes induced by nitrate
    • Wang, R., Guegler, K., LaBrie, S.T., and Crawforda, N.M. (2000) Genomic analysis of a nutrient response in Arabidopsis reveals diverse expression patterns and novel metabolic and potential regulatory genes induced by nitrate. Plant Cell, 12, 1491-1509.
    • (2000) Plant Cell , vol.12 , pp. 1491-1509
    • Wang, R.1    Guegler, K.2    LaBrie, S.T.3    Crawforda, N.M.4
  • 156
    • 70350323687 scopus 로고    scopus 로고
    • Influence of nitrogen on the expression of TaDof1 transcription factor in wheat and its relationship with photosynthetic and ammonium assimilating efficiency
    • Kumar, R., Taware, R., Gaur, V.S., Guru, S.K., and Kumar, A. (2009) Influence of nitrogen on the expression of TaDof1 transcription factor in wheat and its relationship with photosynthetic and ammonium assimilating efficiency. Mol. Biol. Rep., 36 (8), 2209-2220.
    • (2009) Mol. Biol. Rep , vol.36 , Issue.8 , pp. 2209-2220
    • Kumar, R.1    Taware, R.2    Gaur, V.S.3    Guru, S.K.4    Kumar, A.5
  • 157
    • 0030579205 scopus 로고    scopus 로고
    • Molecular cloning of higher plant homologues of the high-affinity nitrate transporters of Chlamydomonas reinhardtii and Aspergillus nidulans
    • Trueman, L.J., Richardson, A., and Forde, B.G. (1996) Molecular cloning of higher plant homologues of the high-affinity nitrate transporters of Chlamydomonas reinhardtii and Aspergillus nidulans. Gene, 175, 223-231.
    • (1996) Gene , vol.175 , pp. 223-231
    • Trueman, L.J.1    Richardson, A.2    Forde, B.G.3
  • 158
    • 0033765356 scopus 로고    scopus 로고
    • Isolation and characterization of HvNRT2.3 and HvNRT2.4, cDNAs encoding high-affinity nitrate transporters from roots of barley
    • Vidmar, J.J., Zhuo, D., Siddiqi, M.Y., and Glass, A.D.M. (2000) Isolation and characterization of HvNRT2.3 and HvNRT2.4, cDNAs encoding high-affinity nitrate transporters from roots of barley. Plant Physiol., 122, 783-792.
    • (2000) Plant Physiol , vol.122 , pp. 783-792
    • Vidmar, J.J.1    Zhuo, D.2    Siddiqi, M.Y.3    Glass, A.D.M.4
  • 159
    • 0033789831 scopus 로고    scopus 로고
    • Fructan accumulation induced by nitrogen deficiency in barley leaves correlates with the level ofsucrose: fructan 6-fructosyltransferase mRNA
    • Wang, C., van den Ende, W., and Tillberg, J.E. (2000) Fructan accumulation induced by nitrogen deficiency in barley leaves correlates with the level ofsucrose: fructan 6-fructosyltransferase mRNA. Planta, 211 (5), 701-707.
    • (2000) Planta , vol.211 , Issue.5 , pp. 701-707
    • Wang, C.1    Ende, V.D.W.2    Tillberg, J.E.3
  • 162
    • 0037355477 scopus 로고    scopus 로고
    • Nylon filter arrays reveal differential gene expression in proteoid roots of white lupin in response to phosphorus deficiency
    • Uhde-Stone, C., Zinn, K.E., Ramirez-Yanez, M., Li, A.G., Vance, C.P., and Allan, D.L. (2003) Nylon filter arrays reveal differential gene expression in proteoid roots of white lupin in response to phosphorus deficiency. Plant Physiol., 131, 1064-1079.
    • (2003) Plant Physiol , vol.131 , pp. 1064-1079
    • Uhde-stone, C.1    Zinn, K.E.2    Ramirez-yanez, M.3    Li, A.G.4    Vance, C.P.5    Allan, D.L.6
  • 164
    • 84885700147 scopus 로고    scopus 로고
    • 8 February
    • http://www.plexdb.org/modules/PD_browse/experiment_browser.php?experiment=BB83&genechip=Barley1 (8 February 2011) .
    • (2011)
  • 166
    • 70350776582 scopus 로고    scopus 로고
    • Microarray analysis of late response to boron toxicity in barley (Hordeum vulgare Hordeum vulgare) leaves
    • Oz, M.T., Yilmaz, R., Eyidogan, F., de Graaff, L., Yucel, M., and Oktemi, H.A. (2009) Microarray analysis of late response to boron toxicity in barley (Hordeum vulgare Hordeum vulgare) leaves. Turkish J. Agric. Forest., 33, 191-202.
    • (2009) Turkish J. Agric. Forest , vol.33 , pp. 191-202
    • Oz, M.T.1    Yilmaz, R.2    Eyidogan, F.3    Graaff, D.L.4    Yucel, M.5    Oktemi, H.A.6
  • 168
    • 0030444055 scopus 로고    scopus 로고
    • Defining selection criteria to improve yield under drought
    • Richards, R.A. (1996) Defining selection criteria to improve yield under drought. Plant Growth Regul., 20 (2), 157-166.
    • (1996) Plant Growth Regul , vol.20 , Issue.2 , pp. 157-166
    • Richards, R.A.1
  • 169
    • 0024508964 scopus 로고
    • Mapping mendelian factors underlying quantitative traits using RFLP linkage maps
    • Lander, E.S. and Botstein, D. (1989) Mapping mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics, 121, 185-199.
    • (1989) Genetics , vol.121 , pp. 185-199
    • Lander, E.S.1    Botstein, D.2
  • 170
    • 0027247860 scopus 로고
    • Interval mapping of multiple quantitative trait loci
    • Jansen, R.C. (1993) Interval mapping of multiple quantitative trait loci. Genetics, 135, 205-211.
    • (1993) Genetics , vol.135 , pp. 205-211
    • Jansen, R.C.1
  • 171
    • 0028224156 scopus 로고
    • Precision mapping of quantitative trait loci
    • Zeng, Z.B. (1994) Precision mapping of quantitative trait loci. Genetics, 136, 1457-1468.
    • (1994) Genetics , vol.136 , pp. 1457-1468
    • Zeng, Z.B.1
  • 172
    • 5144221069 scopus 로고    scopus 로고
    • Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars
    • Kraakman, A.T.W., Niks, R.E., van den Berg, P.M.M.M., Stam, P., and van Eeuwijk, F.A. (2004) Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars. Genetics, 168, 435-446.
    • (2004) Genetics , vol.168 , pp. 435-446
    • Kraakman, A.T.W.1    Niks, R.E.2    Berg, V.D.P.M.M.M.3    Stam, P.4    Eeuwijk, V.F.A.5
  • 176
    • 79954516114 scopus 로고    scopus 로고
    • A genotypic and phenotypic information source for marker-assisted selection of cereals: the CEREALAB Database
    • doi: 10.1093/database/baq038
    • Milc, J., Sala, A., Bergamaschi, S., and Pecchioni, N. (2011) A genotypic and phenotypic information source for marker-assisted selection of cereals: the CEREALAB Database. Database. doi: 10.1093/database/baq038
    • (2011) Database
    • Milc, J.1    Sala, A.2    Bergamaschi, S.3    Pecchioni, N.4
  • 177
    • 0002100348 scopus 로고
    • Primary, secondary and meta-analysis of research
    • Glass, G.V. (1976) Primary, secondary and meta-analysis of research. Educ. Res., 5, 3-8.
    • (1976) Educ. Res , vol.5 , pp. 3-8
    • Glass, G.V.1
  • 178
    • 0034101307 scopus 로고    scopus 로고
    • Quantitative trait loci: a meta-analysis
    • Goffinet, B. and Gerber, S. (2000) Quantitative trait loci: a meta-analysis. Genetics, 155, 463-473.
    • (2000) Genetics , vol.155 , pp. 463-473
    • Goffinet, B.1    Gerber, S.2
  • 179
    • 67650400640 scopus 로고    scopus 로고
    • Improved resolution in the position of drought-related QTLs in a single mapping population of rice by meta-analysis
    • Khowaja, F.S., Norton, G.J., Courtois, B., and Price, A.H. (2009) Improved resolution in the position of drought-related QTLs in a single mapping population of rice by meta-analysis. BMC Genomics, 10, 276.
    • (2009) BMC Genomics , vol.10 , pp. 276
    • Khowaja, F.S.1    Norton, G.J.2    Courtois, B.3    Price, A.H.4
  • 181
    • 0142113840 scopus 로고    scopus 로고
    • An integrated map of the barley genome
    • in The DNA-Based Markers in Plants, 2nd edn (eds R.L. Phillips and I.K. Vasil), Kluwer Academic Publishers, Dordrecht
    • Kleinhofs, A. and Graner, A. (2001) An integrated map of the barley genome, in The DNA-Based Markers in Plants, 2nd edn (eds R.L. Phillips and I.K. Vasil), Kluwer Academic Publishers, Dordrecht, pp. 187-199.
    • (2001) , pp. 187-199
    • Kleinhofs, A.1    Graner, A.2
  • 182
    • 0346505481 scopus 로고    scopus 로고
    • Overexpression of the rice Osmyb4 gene increases chilling and freezing tolerance of Arabidopsis thaliana plants
    • Vannini, C., Locatelli, F., Bracale, M., Magnani, E., Marsoni, M., Osnato, M., Mattana, M., Baldoni, E., and Coraggio, I. (2004) Overexpression of the rice Osmyb4 gene increases chilling and freezing tolerance of Arabidopsis thaliana plants. Plant J., 37 (1), 115-127.
    • (2004) Plant J , vol.37 , Issue.1 , pp. 115-127
    • Vannini, C.1    Locatelli, F.2    Bracale, M.3    Magnani, E.4    Marsoni, M.5    Osnato, M.6    Mattana, M.7    Baldoni, E.8    Coraggio, I.9
  • 183
    • 0037256706 scopus 로고    scopus 로고
    • The transcription factors HvAB15 and HvVP1 are required for the abscisic acid induction of gene expression in barley aleurone cells
    • Casaretto, J. and Ho, T.D. (2003) The transcription factors HvAB15 and HvVP1 are required for the abscisic acid induction of gene expression in barley aleurone cells. Plant Cell, 15 (1), 271-284.
    • (2003) Plant Cell , vol.15 , Issue.1 , pp. 271-284
    • Casaretto, J.1    Ho, T.D.2
  • 184
    • 49749145667 scopus 로고    scopus 로고
    • Positive role of a wheat HvAB15 ortholog in abiotic stress response of seedlings
    • Kobayashi, F., Maeta, E., Terashima, A., and Takumi, S. (2008) Positive role of a wheat HvAB15 ortholog in abiotic stress response of seedlings. Physiol. Plant., 134, 74-86.
    • (2008) Physiol. Plant , vol.134 , pp. 74-86
    • Kobayashi, F.1    Maeta, E.2    Terashima, A.3    Takumi, S.4
  • 185
    • 33646382386 scopus 로고    scopus 로고
    • Believe it or not, QTLs are accurate!
    • Price, A.H. (2006) Believe it or not, QTLs are accurate!. Trends Plant Sci., 11 (5), 213-216.
    • (2006) Trends Plant Sci , vol.11 , Issue.5 , pp. 213-216
    • Price, A.H.1
  • 186
    • 0029803556 scopus 로고    scopus 로고
    • Use of the additive main effects and multiplicative interaction model in QTL mapping for adaptation in barley
    • Romagosa, I., Ullrich, S.E., Han, F., and Hayes, P.M. (1996) Use of the additive main effects and multiplicative interaction model in QTL mapping for adaptation in barley. Theor. Appl. Genet., 93 (1-2), 30-37.
    • (1996) Theor. Appl. Genet , vol.93 , Issue.1 , pp. 30-37
    • Romagosa, I.1    Ullrich, S.E.2    Han, F.3    Hayes, P.M.4
  • 187
    • 34249023066 scopus 로고    scopus 로고
    • Genomewide analysis of epistatic effects for quantitative traits in barley
    • Xu, S. and Jia, Z. (2007) Genomewide analysis of epistatic effects for quantitative traits in barley. Genetics, 175, 1955-1963.
    • (2007) Genetics , vol.175 , pp. 1955-1963
    • Xu, S.1    Jia, Z.2
  • 190
    • 0035400051 scopus 로고    scopus 로고
    • Genetical genomics: the added value from segregation
    • Jansen, R.C. and Nap, J.P. (2001) Genetical genomics: the added value from segregation. Trends Genet., 17 (7), 388-391.
    • (2001) Trends Genet , vol.17 , Issue.7 , pp. 388-391
    • Jansen, R.C.1    Nap, J.P.2
  • 191
    • 20644454887 scopus 로고    scopus 로고
    • Genetical genomics in humans and model organisms
    • de Koning, D.J. and Haley, C.S. (2005) Genetical genomics in humans and model organisms. Trends Genet., 21 (7), 377-381.
    • (2005) Trends Genet , vol.21 , Issue.7 , pp. 377-381
    • Koning, D.D.J.1    Haley, C.S.2
  • 192
    • 33744810323 scopus 로고    scopus 로고
    • High-density haplotying with microarray-based expression and single feature polymorphism markers in Arabidopsis
    • West, M.A.L., Leeuwen, H., Kozik, A., Kliebenstein, D.K., Doerge, R.W., Clair, D.A., and Michelmore, R.W. (2006) High-density haplotying with microarray-based expression and single feature polymorphism markers in Arabidopsis. Genome Res., 16, 787-795.
    • (2006) Genome Res , vol.16 , pp. 787-795
    • West, M.A.L.1    Leeuwen, H.2    Kozik, A.3    Kliebenstein, D.K.4    Doerge, R.W.5    Clair, D.A.6    Michelmore, R.W.7
  • 193
    • 77956841911 scopus 로고    scopus 로고
    • A global analysis of QTLs for expression variations in rice shoots at the early seedling stage
    • Wang, J., Yu, H., Xie, W., Xing, Y., Yu, S., Xu, C., Li, X., Xiao, J., and Zhang, Q. (2010) A global analysis of QTLs for expression variations in rice shoots at the early seedling stage. Plant J., 63, 1063-1074.
    • (2010) Plant J , vol.63 , pp. 1063-1074
    • Wang, J.1    Yu, H.2    Xie, W.3    Xing, Y.4    Yu, S.5    Xu, C.6    Li, X.7    Xiao, J.8    Zhang, Q.9
  • 195
    • 84858781326 scopus 로고    scopus 로고
    • Expression quantitative trait loci mapping heat tolerance during reproductive development in wheat (Triticum aestivum), in Wheat Production in Stressed Environments
    • (eds H.T. Buck, J.E. Nisi, and N. Salomón), Springer, Amsterdam
    • Hays, D., Mason, E., Hwa Do, J., Menz, M., and Reynolds, M. (2007) Expression quantitative trait loci mapping heat tolerance during reproductive development in wheat (Triticum aestivum), in Wheat Production in Stressed Environments (eds H.T. Buck, J.E. Nisi, and N. Salomón), Springer, Amsterdam, pp. 373-382.
    • (2007) , pp. 373-382
    • Hays, D.1    Mason, E.2    Do, H.J.3    Menz, M.4    Reynolds, M.5
  • 196
    • 84885792803 scopus 로고    scopus 로고
    • Integration of array-based markers and expression QTL with genetic maps in wheat
    • Jan. 15-19, 2011, San Diego, CA.
    • Jordan, M.C. and Banks, T.W. (2011) Integration of array-based markers and expression QTL with genetic maps in wheat. P274. Plant and Animal Genomes XIX Conference, Jan. 15-19, 2011, San Diego, CA.
    • (2011) P274. Plant and Animal Genomes XIX Conference
    • Jordan, M.C.1    Banks, T.W.2
  • 197
    • 79952103186 scopus 로고    scopus 로고
    • Mapping of quantitative trait loci associated with protein expression variation in barley grains
    • doi: 10.1007/s11032-010-9432-2
    • Witzel, K., Pietsch, C., Strickert, M., Matros, A., Röder, M.S., Weschke, W., Wobus, U., and Mock, H. (2010) Mapping of quantitative trait loci associated with protein expression variation in barley grains. Mol. Breed. doi: 10.1007/s11032-010-9432-2
    • (2010) Mol. Breed
    • Witzel, K.1    Pietsch, C.2    Strickert, M.3    Matros, A.4    Röder, M.S.5    Weschke, W.6    Wobus, U.7    Mock, H.8
  • 199
    • 54149090305 scopus 로고    scopus 로고
    • Biochemical networks and epistasis shape the Arabidopsis thaliana metabolome
    • Rowe, H.C., Hansen, B.G., Halkier, B.A., and Kliebenstein, D.J. (2008) Biochemical networks and epistasis shape the Arabidopsis thaliana metabolome. Plant Cell, 20, 1199-1216.
    • (2008) Plant Cell , vol.20 , pp. 1199-1216
    • Rowe, H.C.1    Hansen, B.G.2    Halkier, B.A.3    Kliebenstein, D.J.4
  • 200
    • 34249055193 scopus 로고    scopus 로고
    • Global eQTL mapping reveals the complex genetic architecture of transcript level variation in Arabidopsis
    • West, M.A.L., Kim, K., Kliebenstein, D.J., van Leeuwen, H., Michelmore, R.W., Doerge, R.W., and St Clair, D.A. (2007) Global eQTL mapping reveals the complex genetic architecture of transcript level variation in Arabidopsis. Genetics, 175, 1441-1450.
    • (2007) Genetics , vol.175 , pp. 1441-1450
    • West, M.A.L.1    Kim, K.2    Kliebenstein, D.J.3    Leeuwen, V.H.4    Michelmore, R.W.5    Doerge, R.W.6    Clair, S.D.A.7
  • 201
    • 42949113636 scopus 로고    scopus 로고
    • The effects of cold acclimation on photosynthetic apparatus and the expression of COR14b in four genotypes of barley (Hordeum vulgare) contrasting in their tolerance to freezing and high-light treatment in cold conditions
    • Rapacz, M., Wolanin, B., Hura, K., and Tyrka, M. (2008) The effects of cold acclimation on photosynthetic apparatus and the expression of COR14b in four genotypes of barley (Hordeum vulgare) contrasting in their tolerance to freezing and high-light treatment in cold conditions. Ann. Bot., 101, 689-699.
    • (2008) Ann. Bot , vol.101 , pp. 689-699
    • Rapacz, M.1    Wolanin, B.2    Hura, K.3    Tyrka, M.4
  • 202
    • 63849174963 scopus 로고    scopus 로고
    • Cbf genes of the Fr-A2 allele are differentially regulated between long-term cold acclimated crown tissue of freeze-resistant and susceptible, winter wheat mutant lines
    • Sutton, F., Chen, D.G., Ge, X., and Kenefick, D. (2009) Cbf genes of the Fr-A2 allele are differentially regulated between long-term cold acclimated crown tissue of freeze-resistant and susceptible, winter wheat mutant lines. BMC Plant Biol., 9, 34.
    • (2009) BMC Plant Biol , vol.9 , pp. 34
    • Sutton, F.1    Chen, D.G.2    Ge, X.3    Kenefick, D.4
  • 203
    • 0027225478 scopus 로고
    • Quantitative trait loci on barley (Hordeum vulgare Hordeum vulgare) chromosome 7 associated with components of winter hardiness
    • Hayes, P.M., Blake, T., Chen, T.H.H., Tragoonrung, S., Chen, F., Pan, A., and Liu, B. (1993) Quantitative trait loci on barley (Hordeum vulgare Hordeum vulgare) chromosome 7 associated with components of winter hardiness. Genome, 36, 66-71.
    • (1993) Genome , vol.36 , pp. 66-71
    • Hayes, P.M.1    Blake, T.2    Chen, T.H.H.3    Tragoonrung, S.4    Chen, F.5    Pan, A.6    Liu, B.7
  • 204
    • 0028317307 scopus 로고
    • Genetic analysis of the components of winter hardiness in barley (Hordeum vulgare Hordeum vulgare)
    • Pan, A., Hayes, P.M., Chen, F., Blake, T., Wright, S., Karsai, I., and Bedo, Z. (1994) Genetic analysis of the components of winter hardiness in barley (Hordeum vulgare Hordeum vulgare). Theor. Appl. Genet., 89, 900-910.
    • (1994) Theor. Appl. Genet , vol.89 , pp. 900-910
    • Pan, A.1    Hayes, P.M.2    Chen, F.3    Blake, T.4    Wright, S.5    Karsai, I.6    Bedo, Z.7
  • 205
    • 34249753121 scopus 로고
    • RFLP mapping of the vernalization (Vrn1) and frost resistance (Fr1) genes on chromosome 5 A of wheat
    • Galiba, G., Quarrie, S.A., Sutka, J., Morgounov, A., and Snape, J.W. (1995) RFLP mapping of the vernalization (Vrn1) and frost resistance (Fr1) genes on chromosome 5 A of wheat. Theor. Appl. Genet, 90 (7-8), 1174-1179.
    • (1995) Theor. Appl. Genet , vol.90 , Issue.7 , pp. 1174-1179
    • Galiba, G.1    Quarrie, S.A.2    Sutka, J.3    Morgounov, A.4    Snape, J.W.5
  • 206
    • 0038216562 scopus 로고    scopus 로고
    • The cold-regulated transcriptional activator Cbf3 is linked to the frost-tolerance locus Fr-A2 on wheat chromosome 5A
    • Vágújfalvi, A., Galiba, G., Cattivelli, L., and Dubcovsky, J. (2003) The cold-regulated transcriptional activator Cbf3 is linked to the frost-tolerance locus Fr-A2 on wheat chromosome 5A. Mol. Genet. Genomics, 269 (1), 60-67.
    • (2003) Mol. Genet. Genomics , vol.269 , Issue.1 , pp. 60-67
    • Vágújfalvi, A.1    Galiba, G.2    Cattivelli, L.3    Dubcovsky, J.4
  • 210
    • 77955502865 scopus 로고    scopus 로고
    • CBF gene copy number variation at Frost Resistance-2 is associated with levels of freezing tolerance in temperate-climate cereals
    • Knox, A.K., Dhillon, T., Cheng, H., Tondelli, A., Pecchioni, N., and Stockinger, E.J. (2010) CBF gene copy number variation at Frost Resistance-2 is associated with levels of freezing tolerance in temperate-climate cereals. Theor. Appl. Genet., 121, 21-35.
    • (2010) Theor. Appl. Genet , vol.121 , pp. 21-35
    • Knox, A.K.1    Dhillon, T.2    Cheng, H.3    Tondelli, A.4    Pecchioni, N.5    Stockinger, E.J.6
  • 211
    • 0035423770 scopus 로고    scopus 로고
    • FIERY1 encoding an inositol polyphosphate 1-phosphatase is a negative regulator of abscisic acid and stress signaling in Arabidopsis
    • Xiong, L., Lee, H., Ishitani, M., Lee, H., Zhang, C., and Zhu, J.K. (2001) FIERY1 encoding an inositol polyphosphate 1-phosphatase is a negative regulator of abscisic acid and stress signaling in Arabidopsis. Gene Dev., 15, 1971-1984.
    • (2001) Gene Dev , vol.15 , pp. 1971-1984
    • Xiong, L.1    Lee, H.2    Ishitani, M.3    Lee, H.4    Zhang, C.5    Zhu, J.K.6
  • 212
    • 0037447146 scopus 로고    scopus 로고
    • ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis. Gene Dev
    • Chinnusamy, V., Ohta, M., Kanrar, S., Lee, B., Hong, X., Agarwal, A., and Zhu, J.K. (2003) ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis. Gene Dev., 17, 1043-1054.
    • (2003) , vol.17 , pp. 1043-1054
    • Chinnusamy, V.1    Ohta, M.2    Kanrar, S.3    Lee, B.4    Hong, X.5    Agarwal, A.6    Zhu, J.K.7
  • 215
    • 33745386446 scopus 로고    scopus 로고
    • Low-temperature tolerance and genetic potential in wheat (Triticum aestivum Triticum aestivum): response to photoperiod, vernalization, and plant development
    • Limin, A.E. and Fowler, D.B. (2006) Low-temperature tolerance and genetic potential in wheat (Triticum aestivum Triticum aestivum): response to photoperiod, vernalization, and plant development. Planta, 224, 360-366.
    • (2006) Planta , vol.224 , pp. 360-366
    • Limin, A.E.1    Fowler, D.B.2
  • 216
    • 55749096565 scopus 로고    scopus 로고
    • Regulatory genes involved in the determination of frost tolerance in temperate cereals
    • Galiba, G., Vágújfalvi, A., Li, C., Soltesz, A., and Dubcovsky, J. (2009) Regulatory genes involved in the determination of frost tolerance in temperate cereals. Plant Sci., 176, 12-19.
    • (2009) Plant Sci , vol.176 , pp. 12-19
    • Galiba, G.1    Vágújfalvi, A.2    Li, C.3    Soltesz, A.4    Dubcovsky, J.5
  • 217
    • 34447105038 scopus 로고    scopus 로고
    • Expression levels of barley Cbf genes at the Frost resistance-H2 locus are dependent upon alleles at Fr-H1 and Fr-H2
    • Stockinger, E.J., Skinner, J.S., Gardner, K.G., Francia, E., and Pecchioni, N. (2007) Expression levels of barley Cbf genes at the Frost resistance-H2 locus are dependent upon alleles at Fr-H1 and Fr-H2. Plant J., 51 (2), 308-321.
    • (2007) Plant J , vol.51 , Issue.2 , pp. 308-321
    • Stockinger, E.J.1    Skinner, J.S.2    Gardner, K.G.3    Francia, E.4    Pecchioni, N.5
  • 219
    • 63649137433 scopus 로고    scopus 로고
    • Flt-2L, a locus in barley controlling flowering time, spike density, and plant height
    • Chen, A., Baumann, U., Fincher, G.B., and Collins, N.C. (2009) Flt-2L, a locus in barley controlling flowering time, spike density, and plant height. Funct. Integr. Genomics, 9 (2), 243-254.
    • (2009) Funct. Integr. Genomics , vol.9 , Issue.2 , pp. 243-254
    • Chen, A.1    Baumann, U.2    Fincher, G.B.3    Collins, N.C.4
  • 220
    • 42049098645 scopus 로고    scopus 로고
    • Plant genetics: the blue revolution, drop by drop, gene by gene
    • Pennisi, E. (2008) Plant genetics: the blue revolution, drop by drop, gene by gene. Science, 320 (5873), 171-173.
    • (2008) Science , vol.320 , Issue.5873 , pp. 171-173
    • Pennisi, E.1
  • 221
    • 80051985274 scopus 로고    scopus 로고
    • Genomics of tolerance to abiotic stress in the triticecae
    • , in Genetics and Genomics of the Triticeae(eds G.J. Muehlbauer and C. Feuillet), Springer Science + Business Media
    • Maccaferri, M., Sanguineti, M.C., Giuliani, S., and Tuberosa, R. (2009) Genomics of tolerance to abiotic stress in the triticecae , in Genetics and Genomics of the Triticeae(eds G.J. Muehlbauer and C. Feuillet), Springer Science + Business Media, pp. 481-558.
    • (2009) , pp. 481-558
    • Maccaferri, M.1    Sanguineti, M.C.2    Giuliani, S.3    Tuberosa, R.4
  • 222
    • 33846811563 scopus 로고    scopus 로고
    • Monitoring plant and soil water status: established and novel methods revisited and their relevance to studies of drought tolerance
    • Jones, H.G. (2007) Monitoring plant and soil water status: established and novel methods revisited and their relevance to studies of drought tolerance. J. Exp. Bot., 58, 119-130.
    • (2007) J. Exp. Bot , vol.58 , pp. 119-130
    • Jones, H.G.1
  • 224
    • 31544465463 scopus 로고    scopus 로고
    • Physiological traits used in the breeding of new cultivars for water-scarce environments
    • Richards, R.A. (2006) Physiological traits used in the breeding of new cultivars for water-scarce environments. Agr. Water Manage., 80 (1-3), 197-211.
    • (2006) Agr. Water Manage , vol.80 , Issue.1 , pp. 197-211
    • Richards, R.A.1
  • 226
    • 11244354217 scopus 로고    scopus 로고
    • Identification of drought-inducible genes and differentially expressed sequence tags in barley
    • Diab, A.A., Teulat-Merah, B., This, D., Ozturk, N.Z., Benscher, D., and Sorrells, M.E. (2004) Identification of drought-inducible genes and differentially expressed sequence tags in barley. Theor. Appl. Genet., 109 (7), 1417-1425.
    • (2004) Theor. Appl. Genet , vol.109 , Issue.7 , pp. 1417-1425
    • Diab, A.A.1    Teulat-merah, B.2    This, D.3    Ozturk, N.Z.4    Benscher, D.5    Sorrells, M.E.6
  • 228
    • 0038613748 scopus 로고    scopus 로고
    • Plant biotechnology and breeding: allied for years to come
    • Morandini, P. and Salamini, F. (2003) Plant biotechnology and breeding: allied for years to come. Trends Plant Sci., 8 (2), 70-75.
    • (2003) Trends Plant Sci , vol.8 , Issue.2 , pp. 70-75
    • Morandini, P.1    Salamini, F.2
  • 229
    • 75849164727 scopus 로고    scopus 로고
    • Chromosomal regions controlling seedling drought resistance in Israeli wild barley, Hordeum spontaneum C
    • Chen, G., Krugman, T., Fahima, T., Chen, K., Hu, Y., Roder, M., Nevo, E., and Korol, A. (2010) Chromosomal regions controlling seedling drought resistance in Israeli wild barley, Hordeum spontaneum C. Koch. Genet. Resour. Crop. Evol., 57 (1), 85-99.
    • (2010) Koch. Genet. Resour. Crop. Evol , vol.57 , Issue.1 , pp. 85-99
    • Chen, G.1    Krugman, T.2    Fahima, T.3    Chen, K.4    Hu, Y.5    Roder, M.6    Nevo, E.7    Korol, A.8
  • 230
    • 0034934869 scopus 로고    scopus 로고
    • New QTLs identified for plant water status, water-soluble carbohydrate and osmotic adjustment in a barley population grown in a growth chamber under two water regimes
    • Teulat, B., Borries, C., and This, D. (2001) New QTLs identified for plant water status, water-soluble carbohydrate and osmotic adjustment in a barley population grown in a growth chamber under two water regimes. Theor. Appl. Genet., 103 (1), 161-170.
    • (2001) Theor. Appl. Genet , vol.103 , Issue.1 , pp. 161-170
    • Teulat, B.1    Borries, C.2    This, D.3
  • 231
    • 0347270413 scopus 로고    scopus 로고
    • QTL for relative water content in fieldgrown barley and their stability across Mediterranean environments
    • Teulat, B., Zoumarou-Wallis, N., Rotter, B., Ben Salem, M., Bahri, H., and This, D. (2003) QTL for relative water content in fieldgrown barley and their stability across Mediterranean environments. Theor. Appl. Genet., 108 (1), 181-188.
    • (2003) Theor. Appl. Genet , vol.108 , Issue.1 , pp. 181-188
    • Teulat, B.1    Zoumarou-wallis, N.2    Rotter, B.3    Salem, B.M.4    Bahri, H.5    This, D.6
  • 232
    • 0030964283 scopus 로고    scopus 로고
    • Mapping quantitative trait loci for salt tolerance at germination and the seedling stage in barley (Hordeum vulgare Hordeum vulgare)
    • Mano, Y. and Takeda, K. (1997) Mapping quantitative trait loci for salt tolerance at germination and the seedling stage in barley (Hordeum vulgare Hordeum vulgare). Euphytica, 94, 263-272.
    • (1997) Euphytica , vol.94 , pp. 263-272
    • Mano, Y.1    Takeda, K.2
  • 233
    • 0032867502 scopus 로고    scopus 로고
    • Effect of salinity on salt accumulation and reproductive development in the apical meristem of wheat and barley
    • Munns, R. and Rawson, H.M. (1999) Effect of salinity on salt accumulation and reproductive development in the apical meristem of wheat and barley. Aust. J. Plant Physiol., 26 (5), 459-464.
    • (1999) Aust. J. Plant Physiol , vol.26 , Issue.5 , pp. 459-464
    • Munns, R.1    Rawson, H.M.2
  • 235
    • 84966138776 scopus 로고
    • Chromosome location of genes controlling tolerance to salt (NaCl) and vigour in Hordeum vulgare and H
    • Forster, B.P., Phillips, M.S., Miller, T.E., Baird, E., and Powell, W. (1990) Chromosome location of genes controlling tolerance to salt (NaCl) and vigour in Hordeum vulgare and H. chilense. Heredity, 65, 99-107.
    • (1990) chilense. Heredity , vol.65 , pp. 99-107
    • Forster, B.P.1    Phillips, M.S.2    Miller, T.E.3    Baird, E.4    Powell, W.5
  • 236
    • 73949131661 scopus 로고    scopus 로고
    • Comparative analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination
    • Witzel, K., Weidner, A., Surabhi, G., Varshney, R.K., Kunze, G., Buck-Sorlin, G.H., Borner, A., and Mock, H. (2010) Comparative analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination. Plant Cell Environ., 33 (2), 211-222.
    • (2010) Plant Cell Environ , vol.33 , Issue.2 , pp. 211-222
    • Witzel, K.1    Weidner, A.2    Surabhi, G.3    Varshney, R.K.4    Kunze, G.5    Buck-sorlin, G.H.6    Borner, A.7    Mock, H.8
  • 237
    • 0032804175 scopus 로고    scopus 로고
    • Improving nitrogen use efficiency for cereal production
    • Raun, W.R. and Johnson, G.V. (1999) Improving nitrogen use efficiency for cereal production. Agron. J., 91, 357-363.
    • (1999) Agron. J , vol.91 , pp. 357-363
    • Raun, W.R.1    Johnson, G.V.2
  • 238
    • 0347928654 scopus 로고    scopus 로고
    • Mapping of QTL associated with nitrogen storage and remobilization in barley (Hordeum vulgare Hordeum vulgare) leaves
    • Mickelson, S., See, D., Meyer, F.D., Garner, J.P., Foster, C.R., Blake, T.K., and Fischer, A.M. (2003) Mapping of QTL associated with nitrogen storage and remobilization in barley (Hordeum vulgare Hordeum vulgare) leaves. J. Exp. Bot., 54 (383), 801-812.
    • (2003) J. Exp. Bot , vol.54 , Issue.383 , pp. 801-812
    • Mickelson, S.1    See, D.2    Meyer, F.D.3    Garner, J.P.4    Foster, C.R.5    Blake, T.K.6    Fischer, A.M.7
  • 239
    • 33645567257 scopus 로고    scopus 로고
    • Genomic regions involved in response to grain yield selection at high and low nitrogen fertilization in maize
    • Coque, M. and Gallais, A. (2006) Genomic regions involved in response to grain yield selection at high and low nitrogen fertilization in maize. Theor. Appl. Genet., 112, 1205-1220.
    • (2006) Theor. Appl. Genet , vol.112 , pp. 1205-1220
    • Coque, M.1    Gallais, A.2
  • 240
    • 1142281836 scopus 로고    scopus 로고
    • An approach to the genetics of nitrogen use efficiency in maize
    • Gallais, A. and Hirel, B. (2004) An approach to the genetics of nitrogen use efficiency in maize. J. Exp. Bot., 55 (396), 295-306.
    • (2004) J. Exp. Bot , vol.55 , Issue.396 , pp. 295-306
    • Gallais, A.1    Hirel, B.2
  • 241
    • 21344454860 scopus 로고    scopus 로고
    • Is root growth under phosphorus deficiency affected by source or sink limitations?
    • Wissuwa, M., Gamat, G., and Ismail, A.M. (2005) Is root growth under phosphorus deficiency affected by source or sink limitations? J. Exp. Bot., 56, 1943-1950.
    • (2005) J. Exp. Bot , vol.56 , pp. 1943-1950
    • Wissuwa, M.1    Gamat, G.2    Ismail, A.M.3
  • 242
    • 0030668621 scopus 로고    scopus 로고
    • Inheritance and chromosome location of Alp, a gene controlling aluminium tolerance in "Dayton" barley
    • Minella, E. and Sorrells, M.E. (1997) Inheritance and chromosome location of Alp, a gene controlling aluminium tolerance in "Dayton" barley. Plant Breed., 116 (5), 465-469.
    • (1997) Plant Breed , vol.116 , Issue.5 , pp. 465-469
    • Minella, E.1    Sorrells, M.E.2
  • 243
    • 0036941335 scopus 로고    scopus 로고
    • Identification of AFLP and microsatellite markers linked with an aluminium tolerance gene in barley (Hordeum vulgare Hordeum vulgare)
    • Raman, H., Moroni, S., Sato, K., Read, J., and Scott, J. (2002) Identification of AFLP and microsatellite markers linked with an aluminium tolerance gene in barley (Hordeum vulgare Hordeum vulgare). Theor. Appl. Genet., 105, 458-464.
    • (2002) Theor. Appl. Genet , vol.105 , pp. 458-464
    • Raman, H.1    Moroni, S.2    Sato, K.3    Read, J.4    Scott, J.5
  • 244
    • 34347331248 scopus 로고    scopus 로고
    • Highresolution mapping of the Alp locus and identification of a candidate gene HvMATE controlling aluminium tolerance in barley (Hordeum vulgare Hordeum vulgare)
    • Wang, J., Raman, H., Zhou, M., Ryan, P.R., Delhaize, E., Hebb, D.M., Coombes, N., and Mendham, N. (2007) Highresolution mapping of the Alp locus and identification of a candidate gene HvMATE controlling aluminium tolerance in barley (Hordeum vulgare Hordeum vulgare). Theor. Appl. Genet., 115 (2), 265-276.
    • (2007) Theor. Appl. Genet , vol.115 , Issue.2 , pp. 265-276
    • Wang, J.1    Raman, H.2    Zhou, M.3    Ryan, P.R.4    Delhaize, E.5    Hebb, D.M.6    Coombes, N.7    Mendham, N.8
  • 247
    • 9644257755 scopus 로고    scopus 로고
    • Boron tolerance in barley is mediated by efflux of B from the roots
    • Hayes, J.E. and Reid, R.J. (2004) Boron tolerance in barley is mediated by efflux of B from the roots. Plant Physiol., 136, 3376-3382.
    • (2004) Plant Physiol , vol.136 , pp. 3376-3382
    • Hayes, J.E.1    Reid, R.J.2
  • 248
    • 77955701080 scopus 로고    scopus 로고
    • Boron toxicity tolerance in barley through reduced expression of the multifunctional aquaporin HvNIP2;1
    • Schnurbusch, T., Hayes, J., Hrmova, M., Baumann, U., Ramesh, S.A., Tyerman, S.D., Langridge, P., and Sutton, T. (2010) Boron toxicity tolerance in barley through reduced expression of the multifunctional aquaporin HvNIP2;1. Plant Physiol., 153 (4), 1706-1715.
    • (2010) Plant Physiol , vol.153 , Issue.4 , pp. 1706-1715
    • Schnurbusch, T.1    Hayes, J.2    Hrmova, M.3    Baumann, U.4    Ramesh, S.A.5    Tyerman, S.D.6    Langridge, P.7    Sutton, T.8
  • 249
    • 61349119259 scopus 로고    scopus 로고
    • HvLs11 is a silicon influx transporter in barley
    • Chiba, Y., Mitani, N., Yamaji, N., and Ma, J.F. (2009) HvLs11 is a silicon influx transporter in barley. Plant J., 57 (5), 810-818.
    • (2009) Plant J , vol.57 , Issue.5 , pp. 810-818
    • Chiba, Y.1    Mitani, N.2    Yamaji, N.3    Ma, J.F.4
  • 250
    • 33847315221 scopus 로고    scopus 로고
    • Combining ability of waterlogging tolerance in barley (Hordeum vulgare Hordeum vulgare)
    • Zhou, M., Li, H.B., and Mendham, N.J. (2007) Combining ability of waterlogging tolerance in barley (Hordeum vulgare Hordeum vulgare). Crop Sci., 47, 278-284.
    • (2007) Crop Sci , vol.47 , pp. 278-284
    • Zhou, M.1    Li, H.B.2    Mendham, N.J.3
  • 251
    • 0041847077 scopus 로고    scopus 로고
    • Reviewof prospects for germplasm improvement for waterlogging tolerance in wheat, barley and oats
    • Setter, T.L. and Waters, I. (2003) Reviewof prospects for germplasm improvement for waterlogging tolerance in wheat, barley and oats. Plant Soil., 253, 1-33.
    • (2003) Plant Soil , vol.253 , pp. 1-33
    • Setter, T.L.1    Waters, I.2
  • 252
    • 0035141702 scopus 로고    scopus 로고
    • Expression and inheritance of tolerance to waterlogging stress in wheat
    • Boru, G., van Ginkel, M., Kronstad, W.E., and Boersma, L. (2001) Expression and inheritance of tolerance to waterlogging stress in wheat. Euphytica, 117, 91-98.
    • (2001) Euphytica , vol.117 , pp. 91-98
    • Boru, G.1    Ginkel, V.M.2    Kronstad, W.E.3    Boersma, L.4
  • 253
    • 0242654067 scopus 로고    scopus 로고
    • Evaluation of a QTL for waterlogging tolerance in Southern soybean germplasm
    • Reyna, N., Cornelious, B., Shannon, J.G., and Sneller, C.H. (2003) Evaluation of a QTL for waterlogging tolerance in Southern soybean germplasm. Crop Sci., 43, 2077-2082.
    • (2003) Crop Sci , vol.43 , pp. 2077-2082
    • Reyna, N.1    Cornelious, B.2    Shannon, J.G.3    Sneller, C.H.4
  • 254
    • 51749117168 scopus 로고    scopus 로고
    • Comparative mapping of quantitative trait loci associated with waterlogging tolerance in barley (Hordeum vulgare Hordeum vulgare)
    • Li, H.B., Vaillancourt, R., Mendham, N.J., and Zhou, M.X. (2008) Comparative mapping of quantitative trait loci associated with waterlogging tolerance in barley (Hordeum vulgare Hordeum vulgare). BMC Genomics, 9, 401.
    • (2008) BMC Genomics , vol.9 , pp. 401
    • Li, H.B.1    Vaillancourt, R.2    Mendham, N.J.3    Zhou, M.X.4
  • 255
    • 79953288177 scopus 로고    scopus 로고
    • Accurate phenotyping reveals better QTL for waterlogging tolerance in barley
    • doi: 10.1111/j.1439-0523.2010.01792.x
    • Zhou, M. (2010) Accurate phenotyping reveals better QTL for waterlogging tolerance in barley. Plant Breed. doi: 10.1111/j.1439-0523.2010.01792.x
    • (2010) Plant Breed
    • Zhou, M.1
  • 256
    • 79958135365 scopus 로고    scopus 로고
    • Quantitative proteomic analyses of crop seedlings subjected to stress conditions; a commentary
    • doi: 10.1016/ j.phytochem.2010.10.017
    • Nanjo, Y., Nouri, M., and Komatsu, S. (2010) Quantitative proteomic analyses of crop seedlings subjected to stress conditions; a commentary. Phytochemistry. doi: 10.1016/ j.phytochem.2010.10.017
    • (2010) Phytochemistry
    • Nanjo, Y.1    Nouri, M.2    Komatsu, S.3
  • 257
    • 48949117183 scopus 로고    scopus 로고
    • Optimizing protein extraction from plant tissues for enhanced proteomics analysis
    • Wang, W., Tai, F., and Chen, S. (2008) Optimizing protein extraction from plant tissues for enhanced proteomics analysis. J. Sep. Sci., 31, 2032-2039.
    • (2008) J. Sep. Sci , vol.31 , pp. 2032-2039
    • Wang, W.1    Tai, F.2    Chen, S.3
  • 258
    • 70149084269 scopus 로고    scopus 로고
    • Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function
    • Grobei, M.A., Qeli, E., Brunner, E., Rehrauer, H., Zhang, R., Roschitzki, B., Basler, K., Ahrens, C.H., and Grossniklaus, U. (2009) Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function. Genome Res., 19, 1786-1800.
    • (2009) Genome Res , vol.19 , pp. 1786-1800
    • Grobei, M.A.1    Qeli, E.2    Brunner, E.3    Rehrauer, H.4    Zhang, R.5    Roschitzki, B.6    Basler, K.7    Ahrens, C.H.8    Grossniklaus, U.9
  • 259
    • 68949206409 scopus 로고    scopus 로고
    • Applying mass spectrometry-based proteomics to genetics, genomics and network biology
    • Gstaiger, M. and Aebersold, R. (2009) Applying mass spectrometry-based proteomics to genetics, genomics and network biology. Nat. Rev. Genet., 10, 617-627.
    • (2009) Nat. Rev. Genet , vol.10 , pp. 617-627
    • Gstaiger, M.1    Aebersold, R.2
  • 260
    • 67651173106 scopus 로고    scopus 로고
    • Proteomics by mass spectrometry: approaches, advances, and applications
    • Yates, J.R., Ruse, C.I., and Nakorchevsky, A. (2009) Proteomics by mass spectrometry: approaches, advances, and applications. Ann. Rev. Biomed. Eng., 11, 49-79.
    • (2009) Ann. Rev. Biomed. Eng , vol.11 , pp. 49-79
    • Yates, J.R.1    Ruse, C.I.2    Nakorchevsky, A.3
  • 261
    • 34548442959 scopus 로고    scopus 로고
    • Crop proteomics: aim at sustainable agriculture of tomorrow
    • Salekdeh, G.H. and Komatsu, S. (2007) Crop proteomics: aim at sustainable agriculture of tomorrow. Proteomics, 7, 2976-2996.
    • (2007) Proteomics , vol.7 , pp. 2976-2996
    • Salekdeh, G.H.1    Komatsu, S.2
  • 262
    • 61549084035 scopus 로고    scopus 로고
    • Rice proteomics: ending phase I and the beginning of phase II
    • Agrawal, G.K., Jwa, N.S., and Rakwal, R. (2009) Rice proteomics: ending phase I and the beginning of phase II. Proteomics, 9, 935-963.
    • (2009) Proteomics , vol.9 , pp. 935-963
    • Agrawal, G.K.1    Jwa, N.S.2    Rakwal, R.3
  • 263
    • 63349106787 scopus 로고    scopus 로고
    • Soybean proteomics and its application to functional analysis
    • Komatsu, S. and Ahsan, N. (2009) Soybean proteomics and its application to functional analysis. J. Proteomics, 72, 325-336.
    • (2009) J. Proteomics , vol.72 , pp. 325-336
    • Komatsu, S.1    Ahsan, N.2
  • 265
    • 0347755545 scopus 로고    scopus 로고
    • Rice proteome database based on twodimensional polyacrylamide gel electrophoresis: its status in 2003
    • Komatsu, S., Kojima, K., Suzuki, K., Ozaki, K., and Higo, K. (2004) Rice proteome database based on twodimensional polyacrylamide gel electrophoresis: its status in 2003. Nucleic Acids Res., 32, D388-D392.
    • (2004) Nucleic Acids Res , vol.32
    • Komatsu, S.1    Kojima, K.2    Suzuki, K.3    Ozaki, K.4    Higo, K.5
  • 266
    • 63349083032 scopus 로고    scopus 로고
    • Barley seed proteomics from spot to structures
    • Finnie, C. and Svensson, B. (2009) Barley seed proteomics from spot to structures. J. Proteomics, 72, 315-324.
    • (2009) J. Proteomics , vol.72 , pp. 315-324
    • Finnie, C.1    Svensson, B.2
  • 268
    • 0036010774 scopus 로고    scopus 로고
    • QTL analysis of proteome and transcriptome variations for dissecting the genetic architecture of complex traits in maize
    • Consoli, L., Lefevre, A., Zivy, M., de Vienne, D., and Damerval, C. (2002) QTL analysis of proteome and transcriptome variations for dissecting the genetic architecture of complex traits in maize. Plant Mol. Biol., 48, 575-581.
    • (2002) Plant Mol. Biol , vol.48 , pp. 575-581
    • Consoli, L.1    Lefevre, A.2    Zivy, M.3    Vienne, D.D.4    Damerval, C.5
  • 270
    • 0037330377 scopus 로고    scopus 로고
    • Proteomic analysis of the effect of heat stress on hexaploid wheat grain: characterization of heat-responsive proteins from total endosperm
    • Majoul, T., Bancel, E., Triboi, E., Ben Hamida, J., and Branlard, G. (2003) Proteomic analysis of the effect of heat stress on hexaploid wheat grain: characterization of heat-responsive proteins from total endosperm. Proteomics, 3, 175-183.
    • (2003) Proteomics , vol.3 , pp. 175-183
    • Majoul, T.1    Bancel, E.2    Triboi, E.3    Hamida, B.J.4    Branlard, G.5
  • 271
    • 34948843692 scopus 로고    scopus 로고
    • Aproteomic approach in analyzing heat-responsive proteins in rice leaves
    • Lee, D.G., Ahsan, N., Lee, S.H., Kang, K.Y., Bahk, J.D., Lee, I.J., and Lee Dr, B.H. (2007) Aproteomic approach in analyzing heat-responsive proteins in rice leaves. Proteomics, 7, 3369-3383.
    • (2007) Proteomics , vol.7 , pp. 3369-3383
    • Lee, D.G.1    Ahsan, N.2    Lee, S.H.3    Kang, K.Y.4    Bahk, J.D.5    Lee, I.J.6    Lee Dr, B.H.7
  • 272
    • 3242794395 scopus 로고    scopus 로고
    • Proteomic analysis of small heat shock protein isoforms in barley shoots
    • Sule, A., Vanrobaeys, F., Hajos, G., van Beeumen, J., and Devreese, B. (2004) Proteomic analysis of small heat shock protein isoforms in barley shoots. Phytochemistry, 65, 1853-1863.
    • (2004) Phytochemistry , vol.65 , pp. 1853-1863
    • Sule, A.1    Vanrobaeys, F.2    Hajos, G.3    Beeumen, V.J.4    Devreese, B.5
  • 273
    • 84872532742 scopus 로고    scopus 로고
    • Abiotic stress responses: complexities in gene expression
    • in Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation (eds A. Pareek, S.K. Sopory, and H.J. Bohnert), Springer, Dordrecht
    • Panjabi-Sabharwal, V., Karan, R., Khan, T., and Pareek, A. (2010) Abiotic stress responses: complexities in gene expression, in Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation (eds A. Pareek, S.K. Sopory, and H.J. Bohnert), Springer, Dordrecht, pp. 177-198.
    • (2010) , pp. 177-198
    • Panjabi-sabharwal, V.1    Karan, R.2    Khan, T.3    Pareek, A.4
  • 276
    • 68949161024 scopus 로고    scopus 로고
    • Salt stress-induced alterations in the root proteome of barley genotypes with contrasting response towards salinity
    • Witzel, K., Weidner, A., Surabhi, G.K., Borner, A., and Mock, H.P. (2009) Salt stress-induced alterations in the root proteome of barley genotypes with contrasting response towards salinity. J. Exp. Bot., 60, 3545-3557.
    • (2009) J. Exp. Bot , vol.60 , pp. 3545-3557
    • Witzel, K.1    Weidner, A.2    Surabhi, G.K.3    Borner, A.4    Mock, H.P.5
  • 277
    • 58149235243 scopus 로고    scopus 로고
    • Proteome analysis of soybean hypocotyl and root under salt stress
    • Aghaei, K., Ehsanpour, A.A., Shah, A.H., and Komatsu, S. (2009) Proteome analysis of soybean hypocotyl and root under salt stress. Amino Acids, 36, 91-98.
    • (2009) Amino Acids , vol.36 , pp. 91-98
    • Aghaei, K.1    Ehsanpour, A.A.2    Shah, A.H.3    Komatsu, S.4
  • 280
    • 34447117005 scopus 로고    scopus 로고
    • Increased abundance of proteins involved in phytosiderophore production in boron-tolerant barley
    • Patterson, J., Ford, K., Cassin, A., Natera, S., and Bacic, A. (2007) Increased abundance of proteins involved in phytosiderophore production in boron-tolerant barley. Plant Physiol., 144, 1612-1631.
    • (2007) Plant Physiol , vol.144 , pp. 1612-1631
    • Patterson, J.1    Ford, K.2    Cassin, A.3    Natera, S.4    Bacic, A.5
  • 281
    • 66449113658 scopus 로고    scopus 로고
    • Quantitative detection of changes in the leaf-mesophyll tonoplast proteome in dependency of a cadmium exposure of barley (Hordeum vulgare Hordeum vulgare) plants
    • Schneider, T., Schellenberg, M., Meyer, S., Keller, F., Gehrig, P., Riedel, K., Lee, Y., Eberl, L., and Martinoia, E. (2009) Quantitative detection of changes in the leaf-mesophyll tonoplast proteome in dependency of a cadmium exposure of barley (Hordeum vulgare Hordeum vulgare) plants. Proteomics, 9, 2668-2677.
    • (2009) Proteomics , vol.9 , pp. 2668-2677
    • Schneider, T.1    Schellenberg, M.2    Meyer, S.3    Keller, F.4    Gehrig, P.5    Riedel, K.6    Lee, Y.7    Eberl, L.8    Martinoia, E.9
  • 282
    • 66449129551 scopus 로고    scopus 로고
    • Recent developments in the application of proteomics to the analysis of plant responses to heavy metals
    • Ahsan, N., Renaut, J., and Komatsu, S. (2009) Recent developments in the application of proteomics to the analysis of plant responses to heavy metals. Proteomics, 9, 2602-2621.
    • (2009) Proteomics , vol.9 , pp. 2602-2621
    • Ahsan, N.1    Renaut, J.2    Komatsu, S.3
  • 283
    • 77956442496 scopus 로고    scopus 로고
    • Proteomics application of crops in the context of climatic changes
    • Hashiguchi, A., Ahsan, N., and Komatsu, S. (2010) Proteomics application of crops in the context of climatic changes. Food Res. Intern., 43, 1803-1813.
    • (2010) Food Res. Intern , vol.43 , pp. 1803-1813
    • Hashiguchi, A.1    Ahsan, N.2    Komatsu, S.3
  • 284
    • 7944225272 scopus 로고    scopus 로고
    • Differential change in root protein patterns of two wheat varieties under high and low nitrogen nutrition levels
    • Bahrman, N., Gouy, A., Devienne-Barret, F., Hirel, B., Vedele, F., and Le Gouis, J. (2005) Differential change in root protein patterns of two wheat varieties under high and low nitrogen nutrition levels. Plant Sci., 168, 81-87.
    • (2005) Plant Sci , vol.168 , pp. 81-87
    • Bahrman, N.1    Gouy, A.2    Devienne-barret, F.3    Hirel, B.4    Vedele, F.5    Gouis, L.J.6
  • 285
    • 79958712974 scopus 로고    scopus 로고
    • Proteomic analysis of low nitrogen stress-responsive proteins in roots of rice
    • doi: 10.1007/s11105-010-0268-z
    • Ding, C., You, J., Liu, Z., Rehmani, M., Wang, S., Li, G., Wang, Q., and Ding, Y. (2010) Proteomic analysis of low nitrogen stress-responsive proteins in roots of rice. Plant Mol. Biol. Rep. doi: 10.1007/s11105-010-0268-z
    • (2010) Plant Mol. Biol. Rep
    • Ding, C.1    You, J.2    Liu, Z.3    Rehmani, M.4    Wang, S.5    Li, G.6    Wang, Q.7    Ding, Y.8
  • 286
    • 1542406264 scopus 로고    scopus 로고
    • Differential protein expression assessed by two-dimensional gel electrophoresis for two wheat varieties grown at four nitrogen levels
    • Bahrman, N., Le Gouis, J., Negroni, L., Amilhat, L., Leroy, P., Laine, A.L., and Jaminon, O. (2004) Differential protein expression assessed by two-dimensional gel electrophoresis for two wheat varieties grown at four nitrogen levels. Proteomics, 4, 709-719.
    • (2004) Proteomics , vol.4 , pp. 709-719
    • Bahrman, N.1    Gouis, L.J.2    Negroni, L.3    Amilhat, L.4    Leroy, P.5    Laine, A.L.6    Jaminon, O.7
  • 287
    • 84887849164 scopus 로고    scopus 로고
    • Proteomic analysis of nitrogen stress-responsive proteins in two rice cultivars differing in N utilization efficiency
    • Song, C., Zeng, F., Feibo, W., Ma, W., and Zhang, G. (2010) Proteomic analysis of nitrogen stress-responsive proteins in two rice cultivars differing in N utilization efficiency. J. Integr. OMICS, 1 (1), 78-87.
    • (2010) J. Integr. OMICS , vol.1 , Issue.1 , pp. 78-87
    • Song, C.1    Zeng, F.2    Feibo, W.3    Ma, W.4    Zhang, G.5
  • 291
    • 34047093266 scopus 로고    scopus 로고
    • Convergent evolution of genomic imprinting in plants and mammals
    • Feil, R. and Berger, F. (2007) Convergent evolution of genomic imprinting in plants and mammals. Trends Genet., 23, 192-199.
    • (2007) Trends Genet , vol.23 , pp. 192-199
    • Feil, R.1    Berger, F.2
  • 292
    • 51649111864 scopus 로고    scopus 로고
    • MicroRNA maturation and action: the expanding roles of ARGONAUTEs
    • Mallory, A.C., Elmayan, T., and Vaucheret, H. (2008) MicroRNA maturation and action: the expanding roles of ARGONAUTEs. Curr. Opin. Plant Biol., 11, 560-566.
    • (2008) Curr. Opin. Plant Biol , vol.11 , pp. 560-566
    • Mallory, A.C.1    Elmayan, T.2    Vaucheret, H.3
  • 294
    • 77952974197 scopus 로고    scopus 로고
    • Strategies for epigenome analysis
    • , in Epigenomics(eds A.C. Ferguson-Smith, J.M. Greally, and R.A. Martienssen), Springer Science + Business Media
    • Brinkman, A.B. and Stunnenberg, H.G. (2009) Strategies for epigenome analysis , in Epigenomics(eds A.C. Ferguson-Smith, J.M. Greally, and R.A. Martienssen), Springer Science + Business Media, pp. 3-18.
    • (2009) , pp. 3-18
    • Brinkman, A.B.1    Stunnenberg, H.G.2
  • 295
    • 84906545994 scopus 로고    scopus 로고
    • Sequencing the epigenome
    • , in Epigenomics(eds A.C. Ferguson-Smith, J.M. Greally, and R.A. Martienssen), Springer Science + Business Media
    • Meissner, A. and Bernstein, B.E. (2009) Sequencing the epigenome , in Epigenomics(eds A.C. Ferguson-Smith, J.M. Greally, and R.A. Martienssen), Springer Science + Business Media, pp. 19-36.
    • (2009) , pp. 19-36
    • Meissner, A.1    Bernstein, B.E.2
  • 298
    • 74549137524 scopus 로고    scopus 로고
    • Unlocking the Arabidopsis epigenome
    • Reinders, J. and Paszkowski, J. (2009) Unlocking the Arabidopsis epigenome. Epigenetics, 4, 557-563.
    • (2009) Epigenetics , vol.4 , pp. 557-563
    • Reinders, J.1    Paszkowski, J.2
  • 299
    • 62349111195 scopus 로고    scopus 로고
    • Epigenetic regulation of stress responses in plants
    • Chinnusamy, V. and Zhu, J.K. (2009) Epigenetic regulation of stress responses in plants. Curr. Opin. Plant Biol., 12, 133-139.
    • (2009) Curr. Opin. Plant Biol , vol.12 , pp. 133-139
    • Chinnusamy, V.1    Zhu, J.K.2
  • 300
    • 77950990836 scopus 로고    scopus 로고
    • Chromatin regulation functions in plant abiotic stress responses
    • Kim, J.M., To, T.K., Nishioka, T., and Seki, M. (2010) Chromatin regulation functions in plant abiotic stress responses. Plant Cell Environ., 33 (4), 604-611.
    • (2010) Plant Cell Environ , vol.33 , Issue.4 , pp. 604-611
    • Kim, J.M.1    To, T.K.2    Nishioka, T.3    Seki, M.4
  • 301
    • 43249091345 scopus 로고    scopus 로고
    • Distinctive core histone post-translational modification patterns in Arabidopsis thaliana
    • doi: 10.1371/journal. pone.0001210
    • Zhang, K., Sridhar, V.V., Zhu, J., Kapoor, A., and Zhu, J.K. (2007) Distinctive core histone post-translational modification patterns in Arabidopsis thaliana. PLoS One, 2 (11), e1210. doi: 10.1371/journal. pone.0001210
    • (2007) PLoS One , vol.2 , Issue.11
    • Zhang, K.1    Sridhar, V.V.2    Zhu, J.3    Kapoor, A.4    Zhu, J.K.5
  • 302
    • 84900136687 scopus 로고    scopus 로고
    • Epigenetic regulation: chromatin modeling and small RNAs
    • in Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation (eds A. Ashwani Pareek, S.K. Sopory and H.J. Bohnert), Springer, Dordrecht
    • Chinnusamy, V. and Zhu, J.K. (2010) Epigenetic regulation: chromatin modeling and small RNAs, in Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation (eds A. Ashwani Pareek, S.K. Sopory and H.J. Bohnert), Springer, Dordrecht, pp. 217-241.
    • (2010) , pp. 217-241
    • Chinnusamy, V.1    Zhu, J.K.2
  • 305
    • 70349522138 scopus 로고    scopus 로고
    • Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis
    • Kwon, C.S., Lee, D., Choi, G., and Chung, W.I. (2009) Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis. Plant J., 60, 112-121.
    • (2009) Plant J , vol.60 , pp. 112-121
    • Kwon, C.S.1    Lee, D.2    Choi, G.3    Chung, W.I.4
  • 306
    • 0035312795 scopus 로고    scopus 로고
    • Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold regulated gene expression
    • Stockinger, E.J., Mao, Y., Regier, M.K., Triezenberg, S.J., and Thomashow, M.F. (2001) Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold regulated gene expression. Nucleic Acids Res., 29, 1524-1533.
    • (2001) Nucleic Acids Res , vol.29 , pp. 1524-1533
    • Stockinger, E.J.1    Mao, Y.2    Regier, M.K.3    Triezenberg, S.J.4    Thomashow, M.F.5
  • 307
  • 308
    • 34047136095 scopus 로고    scopus 로고
    • Sequence and expression analysis of histone deacetylases in rice
    • Fu, W., Wu, K., and Duan, J. (2007) Sequence and expression analysis of histone deacetylases in rice. Biochem. Biophys. Res. Commun., 356, 843-850.
    • (2007) Biochem. Biophys. Res. Commun , vol.356 , pp. 843-850
    • Fu, W.1    Wu, K.2    Duan, J.3
  • 309
    • 33747866294 scopus 로고    scopus 로고
    • Dynamic and reversible changes in histone H3-Lys4 methylation and H3 acetylation occurring at submergence-inducible genes in rice
    • Tsuji, H., Saika, H., Tsutsumi, N., Hirai, A., and Nakazono, M. (2006) Dynamic and reversible changes in histone H3-Lys4 methylation and H3 acetylation occurring at submergence-inducible genes in rice. Plant Cell Physiol., 47, 995-1003.
    • (2006) Plant Cell Physiol , vol.47 , pp. 995-1003
    • Tsuji, H.1    Saika, H.2    Tsutsumi, N.3    Hirai, A.4    Nakazono, M.5
  • 310
    • 0036929765 scopus 로고    scopus 로고
    • Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes
    • Pandey, R., Muller, A., Napoli, C.A., Selinger, D.A., Pikaard, C.S., Richards, E.J., Bender, J., Mount, D.W., and Jorgensen, R.A. (2002) Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res., 30, 5036-5055.
    • (2002) Nucleic Acids Res , vol.30 , pp. 5036-5055
    • Pandey, R.1    Muller, A.2    Napoli, C.A.3    Selinger, D.A.4    Pikaard, C.S.5    Richards, E.J.6    Bender, J.7    Mount, D.W.8    Jorgensen, R.A.9
  • 314
    • 69449097106 scopus 로고    scopus 로고
    • Diversity of Polycomb group complexes in plants: same rules, different players?
    • Hennig, L. and Derkacheva, M. (2009) Diversity of Polycomb group complexes in plants: same rules, different players? Trends Genet., 25, 414-423.
    • (2009) Trends Genet , vol.25 , pp. 414-423
    • Hennig, L.1    Derkacheva, M.2
  • 316
    • 68449091773 scopus 로고    scopus 로고
    • Arabidopsis msi 1 is required for negative regulation of the response to drought stress
    • Alexandre, C., Moller-Steinbach, Y., Schonrock, N., Gruissem, W., and Hennig, L. (2009) Arabidopsis msi 1 is required for negative regulation of the response to drought stress. Mol. Plant, 2, 675-687.
    • (2009) Mol. Plant , vol.2 , pp. 675-687
    • Alexandre, C.1    Moller-steinbach, Y.2    Schonrock, N.3    Gruissem, W.4    Hennig, L.5
  • 317
    • 0037041422 scopus 로고    scopus 로고
    • Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase
    • Jackson, J.P., Lindroth, A.M., Cao, X., and Jacobsen, S.E. (2002) Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature, 416, 556-560.
    • (2002) Nature , vol.416 , pp. 556-560
    • Jackson, J.P.1    Lindroth, A.M.2    Cao, X.3    Jacobsen, S.E.4
  • 318
    • 0037058968 scopus 로고    scopus 로고
    • Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes
    • Cao, X. and Jacobsen, S.E. (2002) Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes. Proc. Natl. Acad. Sci. USA, 99, 16491-16498.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 16491-16498
    • Cao, X.1    Jacobsen, S.E.2
  • 319
    • 27144510677 scopus 로고    scopus 로고
    • The methylation cycle and its possible functions in barley endosperm development
    • Radchuk, V.V., Sreenivasulu, N., Radchuk, R.I., Wobus, U., and Weschke, W. (2005) The methylation cycle and its possible functions in barley endosperm development. Plant Mol. Biol., 59, 289-307.
    • (2005) Plant Mol. Biol , vol.59 , pp. 289-307
    • Radchuk, V.V.1    Sreenivasulu, N.2    Radchuk, R.I.3    Wobus, U.4    Weschke, W.5
  • 320
    • 34247399015 scopus 로고    scopus 로고
    • Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants
    • Choi, C.S. and Sano, H. (2007) Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants. Mol. Genet. Genomics, 277, 589-600.
    • (2007) Mol. Genet. Genomics , vol.277 , pp. 589-600
    • Choi, C.S.1    Sano, H.2
  • 321
    • 0037020179 scopus 로고    scopus 로고
    • Periodic DNA methylation in maize nucleosomes and demethylation by environmental stress
    • Steward, N., Ito, M., Yamaguchi, Y., Koizumi, N., and Sano, H. (2002) Periodic DNA methylation in maize nucleosomes and demethylation by environmental stress. J. Biol. Chem., 277, 37741-37746.
    • (2002) J. Biol. Chem , vol.277 , pp. 37741-37746
    • Steward, N.1    Ito, M.2    Yamaguchi, Y.3    Koizumi, N.4    Sano, H.5
  • 322
    • 0030766180 scopus 로고    scopus 로고
    • Hypermethylation of tobacco heterochromatic loci in response to osmotic stress
    • Kovarik, A., Koukalova, B., Bezdek, M., and Opatrn, Z. (1997) Hypermethylation of tobacco heterochromatic loci in response to osmotic stress. Theor. Appl. Genet., 95, 301-306.
    • (1997) Theor. Appl. Genet , vol.95 , pp. 301-306
    • Kovarik, A.1    Koukalova, B.2    Bezdek, M.3    Opatrn, Z.4
  • 326
    • 66949124248 scopus 로고    scopus 로고
    • Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays
    • Zeller, G., Henz, S.R., Widmer, C.K., Sachsenberg, T., Ratsch, G., Weigel, D., and Laubinger, S. (2009) Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays. Plant J., 58, 1068-1082.
    • (2009) Plant J , vol.58 , pp. 1068-1082
    • Zeller, G.1    Henz, S.R.2    Widmer, C.K.3    Sachsenberg, T.4    Ratsch, G.5    Weigel, D.6    Laubinger, S.7
  • 327
    • 77950418344 scopus 로고    scopus 로고
    • Research on plant abiotic stress responses in the post-genome era: past, present and future
    • Hirayama, T. and Shinozaki, K. (2010) Research on plant abiotic stress responses in the post-genome era: past, present and future. Plant J., 61, 1041-1052.
    • (2010) Plant J , vol.61 , pp. 1041-1052
    • Hirayama, T.1    Shinozaki, K.2
  • 328
    • 67349123973 scopus 로고    scopus 로고
    • Redefining microRNA targets
    • Seitz, H. (2009) Redefining microRNA targets. Curr. Biol., 19, 870-873.
    • (2009) Curr. Biol , vol.19 , pp. 870-873
    • Seitz, H.1
  • 329
    • 77950962979 scopus 로고    scopus 로고
    • Post-transcriptional gene regulation of salinity and drought responses by plant microRNAs
    • Covarrubias, A.A. and Reyes, J.L. (2010) Post-transcriptional gene regulation of salinity and drought responses by plant microRNAs. Plant Cell Environ., 33, 481-489.
    • (2010) Plant Cell Environ , vol.33 , pp. 481-489
    • Covarrubias, A.A.1    Reyes, J.L.2
  • 330
    • 29244490062 scopus 로고    scopus 로고
    • Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
    • Borsani, O., Zhu, J., Verslues, P.E., Sunkar, R., and Zhu, J.K. (2005) Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis. Cell, 123, 1279-1291.
    • (2005) Cell , vol.123 , pp. 1279-1291
    • Borsani, O.1    Zhu, J.2    Verslues, P.E.3    Sunkar, R.4    Zhu, J.K.5
  • 332
    • 42149157716 scopus 로고    scopus 로고
    • Identification of novel and candidate miRNAs in rice by high throughput sequencing
    • Sunkar, R., Zhou, X., Zheng, Y., Zhang, W., and Zhu, J.K. (2008) Identification of novel and candidate miRNAs in rice by high throughput sequencing. BMC Plant Biol., 8, 25.
    • (2008) BMC Plant Biol , vol.8 , pp. 25
    • Sunkar, R.1    Zhou, X.2    Zheng, Y.3    Zhang, W.4    Zhu, J.K.5
  • 333
    • 77958040394 scopus 로고    scopus 로고
    • A computational-based update on microRNAs and their targets in barley (Hordeum vulgare Hordeum vulgare)
    • Colaiacovo, M., Subacchi, A., Bagnaresi, P., Lamontanara, A., Cattivelli, L., and Faccioli, P. (2010) A computational-based update on microRNAs and their targets in barley (Hordeum vulgare Hordeum vulgare). BMC Genomics, 11, 595.
    • (2010) BMC Genomics , vol.11 , pp. 595
    • Colaiacovo, M.1    Subacchi, A.2    Bagnaresi, P.3    Lamontanara, A.4    Cattivelli, L.5    Faccioli, P.6
  • 335
    • 0037121952 scopus 로고    scopus 로고
    • HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA
    • Aufsatz, W., Mette, M.F., van der Winden, J., Matzke, M., and Matzke, A.J. (2002) HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA. EMBO J., 21, 6832-6841.
    • (2002) EMBO J , vol.21 , pp. 6832-6841
    • Aufsatz, W.1    Mette, M.F.2    Winden, V.D.J.3    Matzke, M.4    Matzke, A.J.5
  • 336
    • 33748603444 scopus 로고    scopus 로고
    • Metabolomics: current technologies and future trends
    • Hollywood, K., Brison, D.R., and Goodacre, R. (2006) Metabolomics: current technologies and future trends. Proteomics, 6, 4716-4723.
    • (2006) Proteomics , vol.6 , pp. 4716-4723
    • Hollywood, K.1    Brison, D.R.2    Goodacre, R.3
  • 339
    • 58849117570 scopus 로고    scopus 로고
    • MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites
    • Matsuda, F., Yonekura-Sakakibara, K., Niida, R., Kuromori, T., Shinozaki, K., and Saito, K. (2009) MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites. Plant J., 57, 555-577.
    • (2009) Plant J , vol.57 , pp. 555-577
    • Matsuda, F.1    Yonekura-sakakibara, K.2    Niida, R.3    Kuromori, T.4    Shinozaki, K.5    Saito, K.6
  • 341
    • 6344245668 scopus 로고    scopus 로고
    • A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis
    • Cook, D., Fowler, S., Fiehn, O., and Thomashow, M.F. (2004) A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis. Proc. Natl. Acad. Sci. USA, 101, 15243-15248.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 15243-15248
    • Cook, D.1    Fowler, S.2    Fiehn, O.3    Thomashow, M.F.4
  • 342
    • 34250177304 scopus 로고    scopus 로고
    • Transcript and metabolite profiling during cold acclimation of Arabidopsis reveals an intricate relationship of cold-regulated gene expression with modifications in metabolite content
    • Kaplan, F., Kopka, J., Sung, D.Y., Zhao, W., Popp, M., Porat, R., and Guy, C.L. (2007) Transcript and metabolite profiling during cold acclimation of Arabidopsis reveals an intricate relationship of cold-regulated gene expression with modifications in metabolite content. Plant J., 50, 967-981.
    • (2007) Plant J , vol.50 , pp. 967-981
    • Kaplan, F.1    Kopka, J.2    Sung, D.Y.3    Zhao, W.4    Popp, M.5    Porat, R.6    Guy, C.L.7
  • 343
    • 33846636455 scopus 로고    scopus 로고
    • Alteration of oxidative and carbohydrate metabolism under abiotic stress in two rice (Oryza sativa Oryza sativa) genotypes contrasting in chilling tolerance
    • Morsy, M.R., Jouve, L., Hausman, J.F., Hoffmann, L., and Stewart, J.M. (2007) Alteration of oxidative and carbohydrate metabolism under abiotic stress in two rice (Oryza sativa Oryza sativa) genotypes contrasting in chilling tolerance. J. Plant Physiol., 164, 157-167.
    • (2007) J. Plant Physiol , vol.164 , pp. 157-167
    • Morsy, M.R.1    Jouve, L.2    Hausman, J.F.3    Hoffmann, L.4    Stewart, J.M.5
  • 344
    • 38149124829 scopus 로고    scopus 로고
    • Plant metabolomics reveals conserved and divergent metabolic responses to salinity
    • Sanchez, D.H., Siahpoosh, M.R., Roessner, U., Udvardi, M., and Kopka, J. (2008) Plant metabolomics reveals conserved and divergent metabolic responses to salinity. Physiol. Plant., 132, 209-219.
    • (2008) Physiol. Plant , vol.132 , pp. 209-219
    • Sanchez, D.H.1    Siahpoosh, M.R.2    Roessner, U.3    Udvardi, M.4    Kopka, J.5
  • 346
    • 44449097527 scopus 로고    scopus 로고
    • Metabolite profiling reveals distinct changes in carbon and nitrogen metabolism in phosphate-deficient barley plants (Hordeum vulgare Hordeum vulgare)
    • Huang, C.Y., Roessner, U., Eickmeier, I., Genc, Y., Callahan, D.L., Shirley, N., Langridge, P., and Bacic, A. (2008) Metabolite profiling reveals distinct changes in carbon and nitrogen metabolism in phosphate-deficient barley plants (Hordeum vulgare Hordeum vulgare). Plant Cell Physiol., 49, 691-703.
    • (2008) Plant Cell Physiol , vol.49 , pp. 691-703
    • Huang, C.Y.1    Roessner, U.2    Eickmeier, I.3    Genc, Y.4    Callahan, D.L.5    Shirley, N.6    Langridge, P.7    Bacic, A.8
  • 352
    • 46149084000 scopus 로고    scopus 로고
    • Relationship between metabolic and genomic diversity in sesame (Sesamum indicum Sesamum indicum)
    • Laurentin, H., Ratzinger, A., and Karlovsky, P. (2008) Relationship between metabolic and genomic diversity in sesame (Sesamum indicum Sesamum indicum). BMC Genomics, 9, 250.
    • (2008) BMC Genomics , vol.9 , pp. 250
    • Laurentin, H.1    Ratzinger, A.2    Karlovsky, P.3
  • 353
    • 66949150607 scopus 로고    scopus 로고
    • Ionomics: studying the social networkof mineral nutrients
    • Baxter, I. (2009) Ionomics: studying the social networkof mineral nutrients. Curr. Opin. Plant Biol., 12, 381-386.
    • (2009) Curr. Opin. Plant Biol , vol.12 , pp. 381-386
    • Baxter, I.1
  • 354
    • 44949161992 scopus 로고    scopus 로고
    • Ionomics and the study of the plant ionome
    • Salt, D.E., Baxter, I., and Lahner, B. (2008) Ionomics and the study of the plant ionome. Ann. Rev. Plant Biol., 59, 709-733.
    • (2008) Ann. Rev. Plant Biol , vol.59 , pp. 709-733
    • Salt, D.E.1    Baxter, I.2    Lahner, B.3
  • 356
    • 0037777930 scopus 로고    scopus 로고
    • The genetics of phytate and phosphate accumulation in seeds and leaves of Arabidopsis thaliana, using natural variation
    • Bentsink, L., Yuan, K., Koorneef, M., and Vreugdenhil, D. (2003) The genetics of phytate and phosphate accumulation in seeds and leaves of Arabidopsis thaliana, using natural variation. Theor. Appl. Genet., 106, 1234-1243.
    • (2003) Theor. Appl. Genet , vol.106 , pp. 1234-1243
    • Bentsink, L.1    Yuan, K.2    Koorneef, M.3    Vreugdenhil, D.4
  • 358
    • 33644641162 scopus 로고    scopus 로고
    • Mapping quantitative trait loci associated with selenate tolerance in Arabidopsis thaliana
    • Zhang, L., Byrne, P.F., and Pilon-Smits, E.A. (2006) Mapping quantitative trait loci associated with selenate tolerance in Arabidopsis thaliana. New Phytol., 170, 33-42.
    • (2006) New Phytol , vol.170 , pp. 33-42
    • Zhang, L.1    Byrne, P.F.2    Pilon-smits, E.A.3
  • 359
    • 3142529001 scopus 로고    scopus 로고
    • Natural variation and QTL analysis for cationic mineral content in seeds of Arabidopsis thaliana
    • Vreugdenhil, D., Aarts, M.G.M., Koornneef, M., Nelissen, H., and Ernst, W.H.O. (2004) Natural variation and QTL analysis for cationic mineral content in seeds of Arabidopsis thaliana. Plant Cell Environ., 27, 828-839.
    • (2004) Plant Cell Environ , vol.27 , pp. 828-839
    • Vreugdenhil, D.1    Aarts, M.G.M.2    Koornneef, M.3    Nelissen, H.4    Ernst, W.H.O.5
  • 363
    • 77951023524 scopus 로고    scopus 로고
    • Future and frontiers of automated screening in plant sciences
    • Kolukisaoglu, U. and Thurow, K. (2010) Future and frontiers of automated screening in plant sciences. Plant Sci., 178, 476-484.
    • (2010) Plant Sci , vol.178 , pp. 476-484
    • Kolukisaoglu, U.1    Thurow, K.2
  • 364
    • 77955911906 scopus 로고    scopus 로고
    • High-throughput shoot imaging to study drought responses
    • Berger, B., Parent, B., and Tester, M. (2010) High-throughput shoot imaging to study drought responses. J. Exp. Bot., 61, 3519-3528.
    • (2010) J. Exp. Bot , vol.61 , pp. 3519-3528
    • Berger, B.1    Parent, B.2    Tester, M.3
  • 365
    • 77955895129 scopus 로고    scopus 로고
    • New phenotyping methods for screening wheat and barley for beneficial responses to water deficit
    • Munns, R., James, R.A., Sirault, X.R.R., Furbank, R.T., and Jones, H.G. (2010) New phenotyping methods for screening wheat and barley for beneficial responses to water deficit. J. Exp. Bot., 61, 3499-3507.
    • (2010) J. Exp. Bot , vol.61 , pp. 3499-3507
    • Munns, R.1    James, R.A.2    Sirault, X.R.R.3    Furbank, R.T.4    Jones, H.G.5
  • 367
    • 78651268618 scopus 로고    scopus 로고
    • A systems biology model of the regulatory network in Populus leaves reveals interacting regulators and conserved regulation
    • Street, N., Jansson, S., and Hvidsten, T.R. (2011) A systems biology model of the regulatory network in Populus leaves reveals interacting regulators and conserved regulation. BMC Plant Biol., 11, 13.
    • (2011) BMC Plant Biol , vol.11 , pp. 13
    • Street, N.1    Jansson, S.2    Hvidsten, T.R.3
  • 369
    • 9444236902 scopus 로고    scopus 로고
    • Networks of transcription factors with roles in environmental stress response
    • Chen, W.J. and Zhu, T. (2004) Networks of transcription factors with roles in environmental stress response. Trends Plant Sci., 12, 591-596.
    • (2004) Trends Plant Sci , vol.12 , pp. 591-596
    • Chen, W.J.1    Zhu, T.2
  • 371
    • 33745210764 scopus 로고    scopus 로고
    • Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks
    • Fujita, M., Fujita, Y., Noutoshi, Y., Takahashi, F., Narusaka, Y., Yamaguchi-Shinozaki, K., and Shinozaki, K. (2006) Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks. Curr. Opin. Plant Biol., 9, 436-442.
    • (2006) Curr. Opin. Plant Biol , vol.9 , pp. 436-442
    • Fujita, M.1    Fujita, Y.2    Noutoshi, Y.3    Takahashi, F.4    Narusaka, Y.5    Yamaguchi-shinozaki, K.6    Shinozaki, K.7
  • 372
    • 35748935562 scopus 로고    scopus 로고
    • Integration of Arabidopsis thaliana stress related transcript profiles, promoter structures, and cell-specific expression
    • Ma, S. and Bohnert, H.J. (2007) Integration of Arabidopsis thaliana stress related transcript profiles, promoter structures, and cell-specific expression. Genome Biol., 8, R49.
    • (2007) Genome Biol , vol.8
    • Ma, S.1    Bohnert, H.J.2
  • 373
    • 4043074968 scopus 로고    scopus 로고
    • Novel and stress-regulated microRNAs and other small RNA from Arabidopsis
    • Sunkar, R. and Zhu, J.K. (2004) Novel and stress-regulated microRNAs and other small RNA from Arabidopsis. Plant Cell, 16, 2001-2019.
    • (2004) Plant Cell , vol.16 , pp. 2001-2019
    • Sunkar, R.1    Zhu, J.K.2
  • 374
    • 77951687828 scopus 로고    scopus 로고
    • "Omics" analyses of regulatory networks in plant abiotic stress responses
    • Urano, K., Kurihara, Y., Seki, M., and Shinozaki, K. (2010) "Omics" analyses of regulatory networks in plant abiotic stress responses. Curr. Opin. Plant Biol., 13 (2), 132-138.
    • (2010) Curr. Opin. Plant Biol , vol.13 , Issue.2 , pp. 132-138
    • Urano, K.1    Kurihara, Y.2    Seki, M.3    Shinozaki, K.4
  • 375
    • 65349102226 scopus 로고    scopus 로고
    • A unified mechanism of action for volatile isoprenoids in plant abiotic stress
    • Vickers, C.E., Gershenzon, J., Lerdau, M.T., and Loreto, F. (2009) A unified mechanism of action for volatile isoprenoids in plant abiotic stress. Nat. Chem. Biol., 5, 283-291.
    • (2009) Nat. Chem. Biol , vol.5 , pp. 283-291
    • Vickers, C.E.1    Gershenzon, J.2    Lerdau, M.T.3    Loreto, F.4
  • 376
    • 77649236474 scopus 로고    scopus 로고
    • Multiple stress factors and the emission of plant VOCs
    • doi: 10.1016/j.tplants.2010.01.006
    • Holopainen, J.K. and Gershenzon, J. (2010) Multiple stress factors and the emission of plant VOCs. Trends Plant Sci., 15 (3). doi: 10.1016/j.tplants.2010.01.006
    • (2010) Trends Plant Sci , vol.15 , Issue.3
    • Holopainen, J.K.1    Gershenzon, J.2
  • 378
    • 48549088204 scopus 로고    scopus 로고
    • Quantitative trait loci and crop performance under abiotic stress: where do we stand?
    • Collins, N.C., Tardieu, F., and Tuberosa, R. (2008) Quantitative trait loci and crop performance under abiotic stress: where do we stand? Plant Physiol., 147, 469-486.
    • (2008) Plant Physiol , vol.147 , pp. 469-486
    • Collins, N.C.1    Tardieu, F.2    Tuberosa, R.3
  • 379
    • 0022372110 scopus 로고
    • A possible technique for isolating genic DNA for quantitative traits in plants
    • Robertson, D.S. (1985) A possible technique for isolating genic DNA for quantitative traits in plants. J. Theor. Biol., 117, 1-10.
    • (1985) J. Theor. Biol , vol.117 , pp. 1-10
    • Robertson, D.S.1
  • 380
    • 79951982591 scopus 로고    scopus 로고
    • Differential and integral views of genetics in computational systems biology
    • Noble, D. (2011) Differential and integral views of genetics in computational systems biology. Interface Focus, 1 (1), 7-15.
    • (2011) Interface Focus , vol.1 , Issue.1 , pp. 7-15
    • Noble, D.1
  • 383
    • 49649089054 scopus 로고    scopus 로고
    • Molecular eco-systems biology: towards an understanding of community function
    • Raes, J. and Bork, P. (2008) Molecular eco-systems biology: towards an understanding of community function. Nat. Rev., 6, 693-698.
    • (2008) Nat. Rev , vol.6 , pp. 693-698
    • Raes, J.1    Bork, P.2
  • 386
    • 75949084606 scopus 로고    scopus 로고
    • Systems biology uncovers the foundation of natural genetic diversity
    • Kliebenstein, D.J. (2010) Systems biology uncovers the foundation of natural genetic diversity. Plant Physiol., 152, 480-486.
    • (2010) Plant Physiol , vol.152 , pp. 480-486
    • Kliebenstein, D.J.1
  • 387
    • 52949116045 scopus 로고    scopus 로고
    • Generalizing genetical genomics: getting added value from environmental perturbation
    • Li, Y., Breitling, R., and Jansen, R.C. (2008) Generalizing genetical genomics: getting added value from environmental perturbation. Trends Genet., 24 (10), 518-524.
    • (2008) Trends Genet , vol.24 , Issue.10 , pp. 518-524
    • Li, Y.1    Breitling, R.2    Jansen, R.C.3
  • 388
    • 38149106625 scopus 로고    scopus 로고
    • Integration of metabolomics and proteomics in molecular plant physiology: coping with the complexity by data-dimensionality reduction
    • Weckwerth, W. (2008) Integration of metabolomics and proteomics in molecular plant physiology: coping with the complexity by data-dimensionality reduction. Physiol. Plant., 132 (2), 176-189.
    • (2008) Physiol. Plant , vol.132 , Issue.2 , pp. 176-189
    • Weckwerth, W.1
  • 389
    • 41749125216 scopus 로고    scopus 로고
    • Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants
    • doi: 10.1186/1752-0509-2-16
    • Weston, D.J., Gunter, L.E., Rogers, A., and Wullschleger, S.D. (2008) Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants. BMC Syst. Biol., 2 (16). doi: 10.1186/1752-0509-2-16
    • (2008) BMC Syst. Biol , vol.2 , Issue.16
    • Weston, D.J.1    Gunter, L.E.2    Rogers, A.3    Wullschleger, S.D.4
  • 390
    • 0742305866 scopus 로고    scopus 로고
    • Network biology: understanding the cell's functional organization
    • Barabasi, A.L. and Oltvai, Z.N. (2004) Network biology: understanding the cell's functional organization. Nat. Rev. Genet., 5, 101-113.
    • (2004) Nat. Rev. Genet , vol.5 , pp. 101-113
    • Barabasi, A.L.1    Oltvai, Z.N.2
  • 394
    • 0031714655 scopus 로고    scopus 로고
    • The population genetics of adaptation: the distribution of factors fixed during adaptive evolution
    • Orr, H.A. (1998) The population genetics of adaptation: the distribution of factors fixed during adaptive evolution. Evolution, 52, 935-949.
    • (1998) Evolution , vol.52 , pp. 935-949
    • Orr, H.A.1
  • 395
    • 1842474811 scopus 로고    scopus 로고
    • Quantitative genetic variation: a post-modern view
    • Farrall, M. (2004) Quantitative genetic variation: a post-modern view. Hum. Mol. Genet., 13, R1-R7.
    • (2004) Hum. Mol. Genet , vol.13
    • Farrall, M.1
  • 397
    • 78549289532 scopus 로고    scopus 로고
    • Towards identifying genes underlying ecologically relevanttraits in Arabidopsis thaliana
    • Bergelson, J. and Roux, F. (2010) Towards identifying genes underlying ecologically relevanttraits in Arabidopsis thaliana. Nat. Rev. Genet., 11, 867-879.
    • (2010) Nat. Rev. Genet , vol.11 , pp. 867-879
    • Bergelson, J.1    Roux, F.2
  • 398
    • 77951204515 scopus 로고    scopus 로고
    • Dissection and modelling of abiotic stress tolerance in plants
    • Tardieu, F. and Tuberosa, R. (2010) Dissection and modelling of abiotic stress tolerance in plants. Curr. Opin. Plant Biol., 13 (2), 206-212.
    • (2010) Curr. Opin. Plant Biol , vol.13 , Issue.2 , pp. 206-212
    • Tardieu, F.1    Tuberosa, R.2
  • 399
    • 0000817669 scopus 로고
    • An effect of uterine environment upon skeletal morphology of the mouse
    • McLaren, A. and Michie, D. (1958) An effect of uterine environment upon skeletal morphology of the mouse. Nature, 181, 1147-1148.
    • (1958) Nature , vol.181 , pp. 1147-1148
    • McLaren, A.1    Michie, D.2
  • 400
    • 39749111196 scopus 로고    scopus 로고
    • Plant miRNAs and abiotic stress responses
    • Lu, X.Y. and Huang, X.L. (2008) Plant miRNAs and abiotic stress responses. Biochem. Biophys. Res. Commun., 368, 458-462.
    • (2008) Biochem. Biophys. Res. Commun , vol.368 , pp. 458-462
    • Lu, X.Y.1    Huang, X.L.2
  • 401
    • 77955926543 scopus 로고    scopus 로고
    • Non-coding small RNAs responsive to abiotic stress in wheat (Triticum aestivum Triticum aestivum)
    • Yao, Y., Ni, Z., Peng, H., Sun, F., Xin, M., Sunkar, R., Zhu, J., and Sun, Q. (2010) Non-coding small RNAs responsive to abiotic stress in wheat (Triticum aestivum Triticum aestivum). Funct. Integr. Genomics, 10, 187-190.
    • (2010) Funct. Integr. Genomics , vol.10 , pp. 187-190
    • Yao, Y.1    Ni, Z.2    Peng, H.3    Sun, F.4    Xin, M.5    Sunkar, R.6    Zhu, J.7    Sun, Q.8
  • 403
    • 79955125389 scopus 로고    scopus 로고
    • Long non-coding RNAs and chromatin regulation
    • De Lucia, F. and Dean, C. (2010) Long non-coding RNAs and chromatin regulation. Curr. Opin. Plant Biol., 14, 1-6.
    • (2010) Curr. Opin. Plant Biol , vol.14 , pp. 1-6
    • Lucia, D.F.1    Dean, C.2
  • 404
    • 62349098622 scopus 로고    scopus 로고
    • Conserved noncoding sequences (CNSs) in higher plants
    • Freeling, M. and Subramaniam, S. (2009) Conserved noncoding sequences (CNSs) in higher plants. Curr. Opin. Plant Biol., 12 (2), 126-132.
    • (2009) Curr. Opin. Plant Biol , vol.12 , Issue.2 , pp. 126-132
    • Freeling, M.1    Subramaniam, S.2
  • 405
    • 20344407697 scopus 로고    scopus 로고
    • Evolution of DNA sequence nonhomologies among maize inbreds
    • Brunner, S., Fengler, K., Morgante, M., Tingey, S., and Rafalski, A. (2005) Evolution of DNA sequence nonhomologies among maize inbreds. Plant Cell, 17, 343-360.
    • (2005) Plant Cell , vol.17 , pp. 343-360
    • Brunner, S.1    Fengler, K.2    Morgante, M.3    Tingey, S.4    Rafalski, A.5
  • 408
    • 41949131536 scopus 로고    scopus 로고
    • Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays
    • doi: 10.1371/ journal.pgen.1000032
    • Zhang, X., Shiu, S.H., Cal, A., and Borevitz, J.O. (2008) Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays. PLoS Genet., 4 (3), e1000032. doi: 10.1371/ journal.pgen.1000032
    • (2008) PLoS Genet , vol.4 , Issue.3
    • Zhang, X.1    Shiu, S.H.2    Cal, A.3    Borevitz, J.O.4
  • 409
    • 34447569298 scopus 로고    scopus 로고
    • Copy number variants and genetic traits: closer to the resolution of phenotypic to genotypic variability
    • Beckmann, J.S., Estivill, X., and Antonarakis, S.E. (2007) Copy number variants and genetic traits: closer to the resolution of phenotypic to genotypic variability. Nat. Rev. Genet., 8, 639-646.
    • (2007) Nat. Rev. Genet , vol.8 , pp. 639-646
    • Beckmann, J.S.1    Estivill, X.2    Antonarakis, S.E.3
  • 411
    • 35948991932 scopus 로고    scopus 로고
    • Copy number variants and common disorders: filling the gaps and exploring complexity in genome-wide association studies
    • Estivill, X. and Armengol, L. (2007) Copy number variants and common disorders: filling the gaps and exploring complexity in genome-wide association studies. PLoS Genet., 3 (10), e190.
    • (2007) PLoS Genet , vol.3 , Issue.10
    • Estivill, X.1    Armengol, L.2
  • 412
    • 77958462555 scopus 로고    scopus 로고
    • Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales
    • DeBolt, S. (2010) Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales. Genome Biol. Evol., 2, 441-453.
    • (2010) Genome Biol. Evol , vol.2 , pp. 441-453
    • DeBolt, S.1
  • 413
    • 75849136053 scopus 로고    scopus 로고
    • Allelic genome structural variations in maize detected by array comparative genome hybridization
    • Belo, A., Beatty, M.K., Hondred, D., Fengler, K.A., Li, B., and Rafalski, A. (2010) Allelic genome structural variations in maize detected by array comparative genome hybridization. Theor. Appl. Genet., 120 (2), 355-67.
    • (2010) Theor. Appl. Genet , vol.120 , Issue.2 , pp. 355-367
    • Belo, A.1    Beatty, M.K.2    Hondred, D.3    Fengler, K.A.4    Li, B.5    Rafalski, A.6
  • 414
    • 78549273825 scopus 로고    scopus 로고
    • Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor
    • Swanson-Wagner, R.A., Eichten, S.R., Kumari, S., Tiffin, P., Stein, J.C., Ware, D., and Springer, N.M. (2010) Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor. Genome Res., 20, 1689-1699.
    • (2010) Genome Res , vol.20 , pp. 1689-1699
    • Swanson-wagner, R.A.1    Eichten, S.R.2    Kumari, S.3    Tiffin, P.4    Stein, J.C.5    Ware, D.6    Springer, N.M.7
  • 415
    • 33847320129 scopus 로고    scopus 로고
    • Transposable elements and the plant pan-genomes
    • Morgante, M., De Paoli, E., and Radovic, S. (2007) Transposable elements and the plant pan-genomes. Curr. Opin. Plant Biol., 10, 149-155.
    • (2007) Curr. Opin. Plant Biol , vol.10 , pp. 149-155
    • Morgante, M.1    Paoli, D.E.2    Radovic, S.3
  • 416
    • 48249136116 scopus 로고    scopus 로고
    • Applying modelling experiences from the past to shape crop systems biology: the need to converge crop physiology and functional genomics
    • Yin, X. and Struik, P.C. (2008) Applying modelling experiences from the past to shape crop systems biology: the need to converge crop physiology and functional genomics. New Phytol., 179 (3), 629-642.
    • (2008) New Phytol , vol.179 , Issue.3 , pp. 629-642
    • Yin, X.1    Struik, P.C.2
  • 418
    • 0028873914 scopus 로고
    • Possibility of increasing yield potential of rice by reducing panicle height in the canopy. I. Effects of panicle on light interception and canopy photosynthesis
    • Setter, T.L., Conocono, E.A., Egdane, J.A., and Kropff, M.J. (1995) Possibility of increasing yield potential of rice by reducing panicle height in the canopy. I. Effects of panicle on light interception and canopy photosynthesis. Aust. J. Plant Physiol., 22, 441-451.
    • (1995) Aust. J. Plant Physiol , vol.22 , pp. 441-451
    • Setter, T.L.1    Conocono, E.A.2    Egdane, J.A.3    Kropff, M.J.4
  • 419
    • 33746843948 scopus 로고    scopus 로고
    • Supercharging rice photosynthesis to increase yield
    • Mitchell, P.L. and Sheehy, J.E. (2006) Supercharging rice photosynthesis to increase yield. New Phytol., 171 (4), 688-693.
    • (2006) New Phytol , vol.171 , Issue.4 , pp. 688-693
    • Mitchell, P.L.1    Sheehy, J.E.2
  • 421
    • 0037269169 scopus 로고    scopus 로고
    • A genetic neural network model of flowering time control in Arabidopsis thaliana
    • Welch, S.M., Roe, J.L., and Dong, Z. (2003) A genetic neural network model of flowering time control in Arabidopsis thaliana. Agron. J., 95, 71-81.
    • (2003) Agron. J , vol.95 , pp. 71-81
    • Welch, S.M.1    Roe, J.L.2    Dong, Z.3
  • 422
    • 84885722525 scopus 로고    scopus 로고
    • Molecular breeding. Molecular breeding
    • in Tomato Genomics of Fruit and Vegetable Crops Series (ed. J. Labate), Science Publishers Inc., Enfield, in press.
    • Sabatini, E., Beretta, M., Sala, T., Acciarri, N., Milc, J., and Pecchioni, N. (2011) Molecular breeding. Molecular breeding, in Tomato Genomics of Fruit and Vegetable Crops Series (ed. J. Labate), Science Publishers Inc., Enfield, in press.
    • (2011)
    • Sabatini, E.1    Beretta, M.2    Sala, T.3    Acciarri, N.4    Milc, J.5    Pecchioni, N.6
  • 423
    • 84920054196 scopus 로고    scopus 로고
    • Molecular markers for gene pyramiding and disease resistance breeding in barley
    • in Genomics Assisted Crop Improvement: Vol. 2, Genomics Applications in Crops (eds R.K. Varshney and R. Tuberosa), Springer, Dordrecht
    • Friedt, W. and Ordon, F. (2007) Molecular markers for gene pyramiding and disease resistance breeding in barley, in Genomics Assisted Crop Improvement: Vol. 2, Genomics Applications in Crops (eds R.K. Varshney and R. Tuberosa), Springer, Dordrecht, pp. 81-101.
    • (2007) , pp. 81-101
    • Friedt, W.1    Ordon, F.2
  • 426
    • 8744310545 scopus 로고    scopus 로고
    • Development of PCR-based markers on chromosome 5H for assisted selection of frost-tolerant genotypes in barley
    • Toth, B., Francia, E., Rizza, F., Stanca, A.M., Galiba, G., and Pecchioni, N. (2004) Development of PCR-based markers on chromosome 5H for assisted selection of frost-tolerant genotypes in barley. Mol. Breed., 14 (3), 265-273.
    • (2004) Mol. Breed , vol.14 , Issue.3 , pp. 265-273
    • Toth, B.1    Francia, E.2    Rizza, F.3    Stanca, A.M.4    Galiba, G.5    Pecchioni, N.6
  • 427
    • 68949162236 scopus 로고    scopus 로고
    • Marker-assisted characterization of frost tolerance in barley (Hordeum vulgare Hordeum vulgare)
    • Akar, T., Francia, E., Tondelli, A., Rizza, F., Stanca, A.M., and Pecchioni, N. (2009) Marker-assisted characterization of frost tolerance in barley (Hordeum vulgare Hordeum vulgare). Plant Breed., 128, 381-386.
    • (2009) Plant Breed , vol.128 , pp. 381-386
    • Akar, T.1    Francia, E.2    Tondelli, A.3    Rizza, F.4    Stanca, A.M.5    Pecchioni, N.6
  • 428
    • 77956170006 scopus 로고    scopus 로고
    • Associations of PCR markers with freezing tolerance and photosynthetic acclimation to cold in winter barley
    • Rapacz, M., Tyrka, M., Gut, M., and Mikulski, W. (2010) Associations of PCR markers with freezing tolerance and photosynthetic acclimation to cold in winter barley. Euphytica, 175 (3), 293-301.
    • (2010) Euphytica , vol.175 , Issue.3 , pp. 293-301
    • Rapacz, M.1    Tyrka, M.2    Gut, M.3    Mikulski, W.4
  • 430
    • 84885719670 scopus 로고    scopus 로고
    • 8 February
    • http://www.generationcp.org/sp5/?da=09148937 (8 February 2011) .
    • (2011)
  • 431
    • 28244450248 scopus 로고    scopus 로고
    • Genomics-assisted breeding for crop improvement
    • Varshney, R.K., Graner, A., and Sorrells, M.E. (2005) Genomics-assisted breeding for crop improvement. Trends Plant Sci., 10 (12), 621-630.
    • (2005) Trends Plant Sci , vol.10 , Issue.12 , pp. 621-630
    • Varshney, R.K.1    Graner, A.2    Sorrells, M.E.3
  • 433
    • 84885803562 scopus 로고    scopus 로고
    • The future of cereal/wheat breeding in Europe
    • Brussels, 11.10.2010.
    • Kazmann, E. and Muller, R. (2010) The future of cereal/wheat breeding in Europe. ESA-SCP, Brussels, 11.10.2010.
    • (2010) ESA-SCP
    • Kazmann, E.1    Muller, R.2


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