-
1
-
-
22144473378
-
Developmental determinants of sensitivity and resistance to stress
-
Levine, S. (2005) Developmental determinants of sensitivity and resistance to stress. Psychoneuroendocrinology, 30, 939-946.
-
(2005)
Psychoneuroendocrinology
, vol.30
, pp. 939-946
-
-
Levine, S.1
-
2
-
-
6044233140
-
Stress bei Pflanzen
-
Larcher, W. (1987) Stress bei Pflanzen. Naturwissenschaften, 74, 158-167.
-
(1987)
Naturwissenschaften
, vol.74
, pp. 158-167
-
-
Larcher, W.1
-
3
-
-
0346565879
-
Larcher's definition of plant stress: a valuable principle for metabolic adaptability research
-
Pahlich, E. (1993) Larcher's definition of plant stress: a valuable principle for metabolic adaptability research. Braz.J. Plant Physiol., 5 (2), 209-216.
-
(1993)
Braz.J. Plant Physiol
, vol.5
, Issue.2
, pp. 209-216
-
-
Pahlich, E.1
-
4
-
-
0038034471
-
Genetic improvement of barley yield potential and its physiological determinants in Argentina (1944-1998)
-
Abeledo, L.G., Calderoni, D.F., and Slafer, G.A. (2003) Genetic improvement of barley yield potential and its physiological determinants in Argentina (1944-1998). Euphytica, 130 (3), 325-334.
-
(2003)
Euphytica
, vol.130
, Issue.3
, pp. 325-334
-
-
Abeledo, L.G.1
Calderoni, D.F.2
Slafer, G.A.3
-
5
-
-
77957080749
-
Diversity in abiotic stress tolerances
-
in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam
-
Stanca, A.M., Romagosa, I., Takeda, K., Lundborg, T., Terzi, V., and Cattivelli, L. (2003) Diversity in abiotic stress tolerances, in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam, pp. 179-199.
-
(2003)
, pp. 179-199
-
-
Stanca, A.M.1
Romagosa, I.2
Takeda, K.3
Lundborg, T.4
Terzi, V.5
Cattivelli, L.6
-
6
-
-
84885786539
-
Barley, in Evolution and Adaptation of Cereal Crops
-
(eds V.L. Chopra and S. Prakash), Science Publishers Inc., Enfield
-
Pecchioni, N., Cattivelli, L., Delogu, G., Faccioli, P., Terzi, V., Vale, G., and Stanca, A.M. (2002) Barley, in Evolution and Adaptation of Cereal Crops (eds V.L. Chopra and S. Prakash), Science Publishers Inc., Enfield, pp. 135-211.
-
(2002)
, pp. 135-211
-
-
Pecchioni, N.1
Cattivelli, L.2
Delogu, G.3
Faccioli, P.4
Terzi, V.5
Vale, G.6
Stanca, A.M.7
-
7
-
-
0003630378
-
Responses of Plants to Environmental Stresses
-
Academic Press, New York.
-
Levitt, J. (1980) Responses of Plants to Environmental Stresses, Academic Press, New York.
-
(1980)
-
-
Levitt, J.1
-
8
-
-
8744306298
-
QTL mapping of chromosomal regions conferring reproductive frost tolerance in barley (Hordeum vulgare Hordeum vulgare)
-
Reinheimer, J.L., Barr, A.R., and Eglinton, J.K. (2004) QTL mapping of chromosomal regions conferring reproductive frost tolerance in barley (Hordeum vulgare Hordeum vulgare). Theor. Appl. Genet., 109, 1267-1274.
-
(2004)
Theor. Appl. Genet
, vol.109
, pp. 1267-1274
-
-
Reinheimer, J.L.1
Barr, A.R.2
Eglinton, J.K.3
-
9
-
-
0032780855
-
Mapping of chromosomal regions conferring boron toxicity tolerance in barley (Hordeum vulgare Hordeum vulgare)
-
Jefferies, S.P., Barr, A.R., Karakousis, A., Kretschmer, J.M., Manning, S., Chalmers, K.J., Nelson, J.C., Islam, A.K.M.R., and Langridge, P. (1999) Mapping of chromosomal regions conferring boron toxicity tolerance in barley (Hordeum vulgare Hordeum vulgare). Theor. Appl. Genet., 98, 1293-1303.
-
(1999)
Theor. Appl. Genet
, vol.98
, pp. 1293-1303
-
-
Jefferies, S.P.1
Barr, A.R.2
Karakousis, A.3
Kretschmer, J.M.4
Manning, S.5
Chalmers, K.J.6
Nelson, J.C.7
Islam, A.K.M.R.8
Langridge, P.9
-
10
-
-
0032993342
-
Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor
-
Kasuga, M., Liu, Q., Miura, S., Yamaguchi-Shinozaki, K., and Shinozaki, K. (1999) Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor. Nat. Biotechnol., 17 (3), 229-230.
-
(1999)
Nat. Biotechnol
, vol.17
, Issue.3
, pp. 229-230
-
-
Kasuga, M.1
Liu, Q.2
Miura, S.3
Yamaguchi-shinozaki, K.4
Shinozaki, K.5
-
11
-
-
36348982771
-
Isolation and molecular characterization of the Triticum aestivum L
-
Xu, Z.S., Xia, L.Q., Chen, M., Cheng, X.G., Zhang, R.Y., Li, L.C., Zhao, Y.X., Lu, Y., Ni, Z.Y., Liu, L., Qiu, Z.G., and Ma, Y.Z. (2007) Isolation and molecular characterization of the Triticum aestivum L. ethylene-responsive factor 1 (TaERF1) that increases multiple stress tolerance. Plant Mol. Biol., 65 (6), 719-732.
-
(2007)
ethylene-responsive factor 1 (TaERF1) that increases multiple stress tolerance. Plant Mol. Biol
, vol.65
, Issue.6
, pp. 719-732
-
-
Xu, Z.S.1
Xia, L.Q.2
Chen, M.3
Cheng, X.G.4
Zhang, R.Y.5
Li, L.C.6
Zhao, Y.X.7
Lu, Y.8
Ni, Z.Y.9
Liu, L.10
Qiu, Z.G.11
Ma, Y.Z.12
-
12
-
-
30144445464
-
Abiotic stress: the field environment and stress combination
-
Mittler, R. (2006) Abiotic stress: the field environment and stress combination. Trends Plant Sci., 11 (1), 15-19.
-
(2006)
Trends Plant Sci
, vol.11
, Issue.1
, pp. 15-19
-
-
Mittler, R.1
-
13
-
-
1942533606
-
When defense pathways collide: the response of Arabidopsis to a combination of drought and heat stress
-
Rizhsky, L., Liang, H., Shuman, J., Shulaev, V., Davletova, S., and Mittler, R. (2004) When defense pathways collide: the response of Arabidopsis to a combination of drought and heat stress. Plant Physiol., 134, 1-14.
-
(2004)
Plant Physiol
, vol.134
, pp. 1-14
-
-
Rizhsky, L.1
Liang, H.2
Shuman, J.3
Shulaev, V.4
Davletova, S.5
Mittler, R.6
-
14
-
-
33847240161
-
Large-scale expression profiling and physiological characterization of jasmonic acid-mediated adaptation of barley to salinity stress
-
Walia, H., Wilson, C., Condamine, P., Liu, X., Ismail, A.M., and Close, T.J. (2007) Large-scale expression profiling and physiological characterization of jasmonic acid-mediated adaptation of barley to salinity stress. Plant Cell Environ., 30, 410-421.
-
(2007)
Plant Cell Environ
, vol.30
, pp. 410-421
-
-
Walia, H.1
Wilson, C.2
Condamine, P.3
Liu, X.4
Ismail, A.M.5
Close, T.J.6
-
15
-
-
33847149667
-
Triticeae genomics: advances in sequence analysis of large genome cereal crops
-
Stein, N. (2007) Triticeae genomics: advances in sequence analysis of large genome cereal crops. Chromosome Res., 15, 21-31.
-
(2007)
Chromosome Res
, vol.15
, pp. 21-31
-
-
Stein, N.1
-
16
-
-
58449113638
-
The International Barley Sequencing Consortium: at the threshold of efficient access to the barley genome
-
Schulte, D., Close, T.J., Graner, A., Langridge, P., Matsumoto, T., Muehlbauer, G., Sato, K., Schulman, A.H., Waugh, R., Wise, R.P., and Stein, N. (2009) The International Barley Sequencing Consortium: at the threshold of efficient access to the barley genome. Plant Physiol., 149, 142-147.
-
(2009)
Plant Physiol
, vol.149
, pp. 142-147
-
-
Schulte, D.1
Close, T.J.2
Graner, A.3
Langridge, P.4
Matsumoto, T.5
Muehlbauer, G.6
Sato, K.7
Schulman, A.H.8
Waugh, R.9
Wise, R.P.10
Stein, N.11
-
17
-
-
33645574800
-
Functional genomics of abiotic stress tolerance in cereals
-
Langridge, P., Paltridge, N., and Fincher, G. (2006) Functional genomics of abiotic stress tolerance in cereals. Brief. Funct. Genomic Proteomic, 4 (4), 343-354.
-
(2006)
Brief. Funct. Genomic Proteomic
, vol.4
, Issue.4
, pp. 343-354
-
-
Langridge, P.1
Paltridge, N.2
Fincher, G.3
-
18
-
-
33845764733
-
Deciphering the regulatory mechanisms of abiotic stress tolerance in plants by genomic approaches
-
Sreenivasulu, N., Sopory, S.K., and Kavi Kishor, P.B. (2007) Deciphering the regulatory mechanisms of abiotic stress tolerance in plants by genomic approaches. Gene, 388, 1-13.
-
(2007)
Gene
, vol.388
, pp. 1-13
-
-
Sreenivasulu, N.1
Sopory, S.K.2
Kishor, K.P.B.3
-
19
-
-
84885831843
-
In our own hands: a strategy for conserving biological diversity in California, California Policy Seminar Research Report, University of California, Berkeley
-
Jensen, D.B., Torn, M., and Harte, J. (1990) In our own hands: a strategy for conserving biological diversity in California, California Policy Seminar Research Report, University of California, Berkeley.
-
(1990)
-
-
Jensen, D.B.1
Torn, M.2
Harte, J.3
-
20
-
-
27444439567
-
The domestication of cultivated barley
-
in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam
-
von Bothmer, R., Sato, K., Komatsuda, T., Yasuda, S., and Fischbeck, G. (2003) The domestication of cultivated barley, in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam, pp. 3-280.
-
(2003)
, pp. 3-280
-
-
Bothmer, V.R.1
Sato, K.2
Komatsuda, T.3
Yasuda, S.4
Fischbeck, G.5
-
21
-
-
0037805644
-
Biotechnological prospects from metagenomics
-
Schloss, P.D. and Handelsman, J. (2003) Biotechnological prospects from metagenomics. Curr. Opin. Biotechnol., 14 (3), 303-310.
-
(2003)
Curr. Opin. Biotechnol
, vol.14
, Issue.3
, pp. 303-310
-
-
Schloss, P.D.1
Handelsman, J.2
-
22
-
-
53649106195
-
Next-generation DNA sequencing
-
Shendure, J. and Ji, H. (2008) Next-generation DNA sequencing. Nat. Biotechnol., 26, 1135-1145.
-
(2008)
Nat. Biotechnol
, vol.26
, pp. 1135-1145
-
-
Shendure, J.1
Ji, H.2
-
23
-
-
72849144434
-
Sequencing technologies
-
Metzker, M. (2010) Sequencing technologies. Nat. Rev., 11, 31-46.
-
(2010)
Nat. Rev
, vol.11
, pp. 31-46
-
-
Metzker, M.1
-
24
-
-
0030880972
-
Seed banks and molecular maps: unlocking genetic potential from the wild
-
Tanksley, S.D. and McCouch, S.R. (1997) Seed banks and molecular maps: unlocking genetic potential from the wild. Science, 277 (5329), 1063-1066.
-
(1997)
Science
, vol.277
, Issue.5329
, pp. 1063-1066
-
-
Tanksley, S.D.1
McCouch, S.R.2
-
25
-
-
77957760027
-
Ecogeographical diversity: a Vavilovian approach
-
in Development in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam
-
Knupffer, H., Terentyeva, I., Hammer, K., Kovaleva, O., and Sato, K. (2003) Ecogeographical diversity: a Vavilovian approach, in Development in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam, pp. 53-76.
-
(2003)
, pp. 53-76
-
-
Knupffer, H.1
Terentyeva, I.2
Hammer, K.3
Kovaleva, O.4
Sato, K.5
-
26
-
-
84885713536
-
Global strategy for the ex situ conservation and use of barley germplasm
-
2011 Global Crop Diversity Trust, 8 February
-
Global Crop Diversity Trust (2008) Global strategy for the ex situ conservation and use of barley germplasm http://www.croptrust.org/documents/web/Barley_Strategy_FINAL_27Oct08.pdf (8 February 2011).
-
(2008)
-
-
-
27
-
-
84885815705
-
-
8 February
-
http://www.nordgen.org/index.php/en/content/view/full/371 (8 February 2011).
-
(2011)
-
-
-
28
-
-
0034888953
-
Molecular mapping of the Oregon Wolfe Barleys: a phenotypically polymorphic doubled-haploid population
-
Costa, J.M., Corey, A., Hayes, P.M., Jobet, C., Kleinhofs, A., Kopisch, A., Kramer, S.F., Kudrna, D., Li, M., Riera-Lizarazu, O., Sato, K., Szucs, P., Toojinda, T., Vales, M.I., and Wolfe, R.I. (2001) Molecular mapping of the Oregon Wolfe Barleys: a phenotypically polymorphic doubled-haploid population. Theor. Appl. Genet., 103, 415-424.
-
(2001)
Theor. Appl. Genet
, vol.103
, pp. 415-424
-
-
Costa, J.M.1
Corey, A.2
Hayes, P.M.3
Jobet, C.4
Kleinhofs, A.5
Kopisch, A.6
Kramer, S.F.7
Kudrna, D.8
Li, M.9
Riera-lizarazu, O.10
Sato, K.11
Szucs, P.12
Toojinda, T.13
Vales, M.I.14
Wolfe, R.I.15
-
29
-
-
84885701088
-
-
8 February
-
http://earth.lab.nig.ac.jp/~dclust/cgi-bin/BCC (8 February 2011) .
-
(2011)
-
-
-
30
-
-
77957063718
-
Summarised diversity: the barley core collection
-
in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam
-
Knupffer, H. and van Hintum, T. (2003) Summarised diversity: the barley core collection, in Developments in Plant Genetics and Breeding: Diversity in Barley Hordeum vulgare (eds R. von Bothmer, T. van Hintum, H. Knupffer, and K. Sato), Elsevier Science BV, Amsterdam, pp. 259-267.
-
(2003)
, pp. 259-267
-
-
Knupffer, H.1
Hintum, V.T.2
-
31
-
-
0002170826
-
Origin, evolution, population genetics and resources for breeding of wild barley, Hordeum spontaneum, in the Fertile Crescent
-
in Barley: Genetics, Biochemistry, Molecular Biology and Biotechnology (ed. P.R. Shewry), CAB International, The Alden Press, Oxford
-
Nevo, E. (1992) Origin, evolution, population genetics and resources for breeding of wild barley, Hordeum spontaneum, in the Fertile Crescent, in Barley: Genetics, Biochemistry, Molecular Biology and Biotechnology (ed. P.R. Shewry), CAB International, The Alden Press, Oxford, pp. 19-43.
-
(1992)
, pp. 19-43
-
-
Nevo, E.1
-
32
-
-
77955927217
-
HvNax3-a locus controlling shoot sodium exclusion derived from wild barley (Hordeum vulgare ssp
-
Shavrukov, Y., Gupta, N.K., Miyazaki, J., Baho, M.N., Chalmers, K.J., Tester, M., Langridge, P., and Collins, N.C. (2010) HvNax3-a locus controlling shoot sodium exclusion derived from wild barley (Hordeum vulgare ssp. spontaneum). Funct. Integr. Genomics, 10 (2), 277-291.
-
(2010)
spontaneum). Funct. Integr. Genomics
, vol.10
, Issue.2
, pp. 277-291
-
-
Shavrukov, Y.1
Gupta, N.K.2
Miyazaki, J.3
Baho, M.N.4
Chalmers, K.J.5
Tester, M.6
Langridge, P.7
Collins, N.C.8
-
33
-
-
77954864556
-
Allele mining in crops: prospects and potentials
-
Kumar, G.R., Sakthivel, K., Sundaram, R.M., Neeraja, C.N., Balachandran, S.M., Rani, N.S., Viraktamath, B.C., and Madhav, M.S. (2010) Allele mining in crops: prospects and potentials. Biotechnol. Adv., 28 (4), 451-461.
-
(2010)
Biotechnol. Adv
, vol.28
, Issue.4
, pp. 451-461
-
-
Kumar, G.R.1
Sakthivel, K.2
Sundaram, R.M.3
Neeraja, C.N.4
Balachandran, S.M.5
Rani, N.S.6
Viraktamath, B.C.7
Madhav, M.S.8
-
34
-
-
78650651107
-
Allele mining and sequence diversity at the wheat powdery mildew resistance locus Pm3, in Proceedings of the 11th International Wheat Genetics Symposium
-
(eds R. Appels, R. Eastwood, E. Lagudah, O. Langridge, M. Mackay, and L. McIntyre), Sydney University Press, Sydney
-
Kaur, K., Street, K., Mackay, M., Yahiaoui, N., and Keller, B. (2008) Allele mining and sequence diversity at the wheat powdery mildew resistance locus Pm3, in Proceedings of the 11th International Wheat Genetics Symposium (eds R. Appels, R. Eastwood, E. Lagudah, O. Langridge, M. Mackay, and L. McIntyre), Sydney University Press, Sydney, pp. 1-3.
-
(2008)
, pp. 1-3
-
-
Kaur, K.1
Street, K.2
Mackay, M.3
Yahiaoui, N.4
Keller, B.5
-
35
-
-
35248822115
-
Haplotype analysis of vernalization loci in European barley germplasm reveals novel VRN-H1 alleles and a predominant winter VRN-H1/VRN-H2 multi-locus haplotypes
-
Cockram, J., Chiapparino, E., Taylor, S.A., Starnati, K., Donini, P., Laurie, D.A., and O'Sullivan, D.M. (2007) Haplotype analysis of vernalization loci in European barley germplasm reveals novel VRN-H1 alleles and a predominant winter VRN-H1/VRN-H2 multi-locus haplotypes. Theor. Appl. Genet., 115, 993-1001.
-
(2007)
Theor. Appl. Genet
, vol.115
, pp. 993-1001
-
-
Cockram, J.1
Chiapparino, E.2
Taylor, S.A.3
Starnati, K.4
Donini, P.5
Laurie, D.A.6
O'Sullivan, D.M.7
-
36
-
-
0034951896
-
A mini core subset for capturing diversity and promoting utilization of chickpea genetic resources in crop improvement
-
Upadhyaya, H.D. and Ortiz, R. (2001) A mini core subset for capturing diversity and promoting utilization of chickpea genetic resources in crop improvement. Theor. Appl. Genet., 102 (8), 1292-1298.
-
(2001)
Theor. Appl. Genet
, vol.102
, Issue.8
, pp. 1292-1298
-
-
Upadhyaya, H.D.1
Ortiz, R.2
-
37
-
-
84885705729
-
Allele mining experience on rice germplasm through advanced M strategy using modified heuristic search
-
Park, Y.J. (2007) Allele mining experience on rice germplasm through advanced M strategy using modified heuristic search. W9, Plant and Animal Genomes XV Conference, January 13-17, 2007, San Diego.
-
(2007)
W9, Plant and Animal Genomes XV Conference, January 13-17, 2007, San Diego
-
-
Park, Y.J.1
-
39
-
-
33750688196
-
454 sequencing put to the test using the complex genome of barley
-
Wicker, T., Schlagenhauf, E., Graner, A., Close, T.J., Keller, B., and Stein, N. (2006) 454 sequencing put to the test using the complex genome of barley. BMC Genomics, 7, 275.
-
(2006)
BMC Genomics
, vol.7
, pp. 275
-
-
Wicker, T.1
Schlagenhauf, E.2
Graner, A.3
Close, T.J.4
Keller, B.5
Stein, N.6
-
40
-
-
56549090030
-
Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats
-
Wicker, T., Narechania, A., Sabot, F., Stein, J., Vu, G.T.H., Graner, A., Ware, D., and Stein, N. (2008) Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats. BMC Genomics, 9, 518.
-
(2008)
BMC Genomics
, vol.9
, pp. 518
-
-
Wicker, T.1
Narechania, A.2
Sabot, F.3
Stein, J.4
Vu, G.T.H.5
Graner, A.6
Ware, D.7
Stein, N.8
-
41
-
-
71549121654
-
De novo 454 sequencing of barcoded BAC pools for comprehensive gene survey and genome analysis in the complex genome of barley
-
Steuernagel, B., Taudien, S., Gundlach, H., Seidel, M., Ariyadasa, R., Schulte, D., Petzold, A., Felder, M., Graner, A., Scholz, U., Mayer, K.F.X., Platzer, M., and Stein, N. (2009) De novo 454 sequencing of barcoded BAC pools for comprehensive gene survey and genome analysis in the complex genome of barley. BMC Genomics, 10, 547.
-
(2009)
BMC Genomics
, vol.10
, pp. 547
-
-
Steuernagel, B.1
Taudien, S.2
Gundlach, H.3
Seidel, M.4
Ariyadasa, R.5
Schulte, D.6
Petzold, A.7
Felder, M.8
Graner, A.9
Scholz, U.10
Mayer, K.F.X.11
Platzer, M.12
Stein, N.13
-
42
-
-
69249142634
-
A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley
-
Wicker, T., Taudien, S., Houben, A., Keller, B., Graner, A., Platzer, M., and Stein, N. (2009) A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley. Plant J., 59, 712-722.
-
(2009)
Plant J
, vol.59
, pp. 712-722
-
-
Wicker, T.1
Taudien, S.2
Houben, A.3
Keller, B.4
Graner, A.5
Platzer, M.6
Stein, N.7
-
43
-
-
0025878507
-
Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare)
-
Heun, M., Kennedy, A.E., Anderson, J.A., Lapitan, N.L.V., Sorrells, M.E., and Tanksley, S.D. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare). Genome, 34 (3), 437-447.
-
(1991)
Genome
, vol.34
, Issue.3
, pp. 437-447
-
-
Heun, M.1
Kennedy, A.E.2
Anderson, J.A.3
Lapitan, N.L.V.4
Sorrells, M.E.5
Tanksley, S.D.6
-
44
-
-
28344445873
-
Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress
-
Rostoks, N., Mudie, S., Cardle, L., Russell, J., Ramsay, L., Booth, A., Svensson, J.T., Wanamaker, S.I., Walia, H., Rodriguez, E.M., Hedley, P.E., Liu, H., Morris, J., Close, T.J., Marshall, D.F., and Waugh, R. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Mol. Genet. Genomics, 274, 515-527.
-
(2005)
Mol. Genet. Genomics
, vol.274
, pp. 515-527
-
-
Rostoks, N.1
Mudie, S.2
Cardle, L.3
Russell, J.4
Ramsay, L.5
Booth, A.6
Svensson, J.T.7
Wanamaker, S.I.8
Walia, H.9
Rodriguez, E.M.10
Hedley, P.E.11
Liu, H.12
Morris, J.13
Close, T.J.14
Marshall, D.F.15
Waugh, R.16
-
45
-
-
33846834106
-
A high-density consensus map of barley to compare the distribution of QTLs for partial resistance of Puccinia hordei and of defence gene homologues
-
Marcel, T.C., Varshney, R.K., Barbieri, M., Jafary, H., de Kock, M.J.D., Graner, A., and Niks, R.E. (2007) A high-density consensus map of barley to compare the distribution of QTLs for partial resistance of Puccinia hordei and of defence gene homologues. Theor. Appl. Genet., 114, 487-500.
-
(2007)
Theor. Appl. Genet
, vol.114
, pp. 487-500
-
-
Marcel, T.C.1
Varshney, R.K.2
Barbieri, M.3
Jafary, H.4
Kock, D.M.J.D.5
Graner, A.6
Niks, R.E.7
-
46
-
-
34047186958
-
A high density barley microsatellite consensus map with 775 SSR loci
-
Varshney, R.K., Marcel, T.C., Ramsay, L., Russell, J., Roder, M.S., Stein, N., Waugh, R., Langridge, P., Niks, R.E., and Graner, A. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theor. Appl. Genet., 114, 1091-1103.
-
(2007)
Theor. Appl. Genet
, vol.114
, pp. 1091-1103
-
-
Varshney, R.K.1
Marcel, T.C.2
Ramsay, L.3
Russell, J.4
Roder, M.S.5
Stein, N.6
Waugh, R.7
Langridge, P.8
Niks, R.E.9
Graner, A.10
-
47
-
-
3042840970
-
Diversity Array Technology (DArT) for whole-genome profiling of barley
-
Wenzl, P., Carling, J., Kudrna, D., Jaccoud, D., Huttner, E., Kleinhohs, A., and Kilian, A. (2004) Diversity Array Technology (DArT) for whole-genome profiling of barley. Proc. Natl. Acad. Sci. USA, 101 (26), 9915-9920.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, Issue.26
, pp. 9915-9920
-
-
Wenzl, P.1
Carling, J.2
Kudrna, D.3
Jaccoud, D.4
Huttner, E.5
Kleinhohs, A.6
Kilian, A.7
-
48
-
-
33748700045
-
A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits
-
Wenzl, P., Li, H., Carling, J., Zhou, M., Raman, H., Paul, E., Hearnden, P., Maier, C., Xia, L., Caig, V., Ovesna, J., Cakir, M., Poulsen, D., Wang, J., Raman, R., Smith, K.P., Muehlbauer, G.J., Chalmers, K.J., Kleinhofs, A., Huttner, E., and Kilian, A. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits. BMC Genomics, 7 206.
-
(2006)
BMC Genomics
, vol.7
, pp. 206
-
-
Wenzl, P.1
Li, H.2
Carling, J.3
Zhou, M.4
Raman, H.5
Paul, E.6
Hearnden, P.7
Maier, C.8
Xia, L.9
Caig, V.10
Ovesna, J.11
Cakir, M.12
Poulsen, D.13
Wang, J.14
Raman, R.15
Smith, K.P.16
Muehlbauer, G.J.17
Chalmers, K.J.18
Kleinhofs, A.19
Huttner, E.20
Kilian, A.21
more..
-
49
-
-
34447632976
-
A genetic map of 1,000 SSR and DArT markers in a wide barley cross
-
Hearnden, P.R., Eckelmann, P.J., McMichael, G.L., Hayden, M.J., Eglinton, J.K., and Chalmers, K.J. (2007) A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theor. Appl. Genet., 115, 383-391.
-
(2007)
Theor. Appl. Genet
, vol.115
, pp. 383-391
-
-
Hearnden, P.R.1
Eckelmann, P.J.2
McMichael, G.L.3
Hayden, M.J.4
Eglinton, J.K.5
Chalmers, K.J.6
-
50
-
-
37249073867
-
Gene expression quantitative trait locus analysis of 16,000 barley genes reveals a complex pattern of genome-wide transcriptional regulation
-
Potokina, E., Druka, A., Luo, Z., Wise, R., Waugh, R., and Kearsey, M. (2008) Gene expression quantitative trait locus analysis of 16,000 barley genes reveals a complex pattern of genome-wide transcriptional regulation. Plant J., 53, 90-101.
-
(2008)
Plant J
, vol.53
, pp. 90-101
-
-
Potokina, E.1
Druka, A.2
Luo, Z.3
Wise, R.4
Waugh, R.5
Kearsey, M.6
-
51
-
-
84885765690
-
ESTdevelopment in barley from a cold-induced cDNA library
-
9th ITMI International Triticeae Mapping Initiative Meeting, August 24-28, Viterbo.
-
Pecchioni, N. (1999) ESTdevelopment in barley from a cold-induced cDNA library. 9th ITMI International Triticeae Mapping Initiative Meeting, August 24-28, Viterbo.
-
(1999)
-
-
Pecchioni, N.1
-
52
-
-
6444238967
-
Large-scale analysis of the barley transcriptome based on expressed sequence tags
-
Zhang, H., Sreenivasulu, N., Weschke, W., Stein, N., Rudd, S., Radchuk, V., Potokina, E., Scholz, U., Schweizer, P., Zierod, U., Langridge, P., Varshney, R.K., Wobus, U., and Graner, A. (2004) Large-scale analysis of the barley transcriptome based on expressed sequence tags. Plant J., 40, 276-290.
-
(2004)
Plant J
, vol.40
, pp. 276-290
-
-
Zhang, H.1
Sreenivasulu, N.2
Weschke, W.3
Stein, N.4
Rudd, S.5
Radchuk, V.6
Potokina, E.7
Scholz, U.8
Schweizer, P.9
Zierod, U.10
Langridge, P.11
Varshney, R.K.12
Wobus, U.13
Graner, A.14
-
53
-
-
33745089873
-
An atlas of gene expression from seed to seed through barley development
-
Druka, A., Muehlbauer, G., Druka, I., Caldo, R., Baumann, U., Rostoks, N., Schreiber, A., Wise, R., Close, T., Kleinhofs, A., Graner, A., Schulman, A., Langridge, P., Sato, K., Hayes, P., McNicol, J., Marshall, D., and Waugh, R. (2006) An atlas of gene expression from seed to seed through barley development. Funct. Integr. Genomics, 6 202-211.
-
(2006)
Funct. Integr. Genomics
, vol.6
, pp. 202-211
-
-
Druka, A.1
Muehlbauer, G.2
Druka, I.3
Caldo, R.4
Baumann, U.5
Rostoks, N.6
Schreiber, A.7
Wise, R.8
Close, T.9
Kleinhofs, A.10
Graner, A.11
Schulman, A.12
Langridge, P.13
Sato, K.14
Hayes, P.15
McNicol, J.16
Marshall, D.17
Waugh, R.18
-
54
-
-
30544431726
-
Mapping regulatory genes as candidates for cold and drought stress tolerance in barley
-
Tondelli, A., Francia, E., Barabaschi, D., Aprile, A., Skinner, J.S., Stockinger, E.J., Stanca, A.M., and Pecchioni, N. (2006) Mapping regulatory genes as candidates for cold and drought stress tolerance in barley. Theor. Appl. Genet., 112, 445-454.
-
(2006)
Theor. Appl. Genet
, vol.112
, pp. 445-454
-
-
Tondelli, A.1
Francia, E.2
Barabaschi, D.3
Aprile, A.4
Skinner, J.S.5
Stockinger, E.J.6
Stanca, A.M.7
Pecchioni, N.8
-
55
-
-
33847353451
-
A 1000 loci transcript map of the barley genome: new anchoring points for integrative grass genomics
-
Stein, N., Prasad, M., Scholz, U., Thiel, T., Zhang, H., Wolf, M., Kota, R., Varshney, R.K., Perovic, D., and Graner, A. (2007) A 1000 loci transcript map of the barley genome: new anchoring points for integrative grass genomics. Theor. Appl. Genet., 114, 823-839.
-
(2007)
Theor. Appl. Genet
, vol.114
, pp. 823-839
-
-
Stein, N.1
Prasad, M.2
Scholz, U.3
Thiel, T.4
Zhang, H.5
Wolf, M.6
Kota, R.7
Varshney, R.K.8
Perovic, D.9
Graner, A.10
-
56
-
-
68349151220
-
A high-density transcript linkage map of barley derived from a single population
-
Sato, K., Nankaku, N., and Takeda, K. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity, 103, 110-117.
-
(2009)
Heredity
, vol.103
, pp. 110-117
-
-
Sato, K.1
Nankaku, N.2
Takeda, K.3
-
57
-
-
73449108400
-
Development and implementation of high-throughput SNP genotyping in barley
-
Close, T.J., Bhat, P.R., Lonardi, S., Wu, Y., Rostoks, N., Ramsay, L., Druka, A., Stein, N., Svensson, J.T., Wanamaker, S., Bozdag, S., Roose, M.L., Moscou, M.J., Chao, S., Varshney, R.K., Szucs, P., Sato, K., Hayes, P.M., Matthews, D.E., Kleinhofs, A., Muehlbauer, G.J., DeYoung, J., Marshall, D.F., Madishetty, K., Fenton, R.D., Condamine, P., Graner, A., and Waugh, R. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics, 10 582.
-
(2009)
BMC Genomics
, vol.10
, pp. 582
-
-
Close, T.J.1
Bhat, P.R.2
Lonardi, S.3
Wu, Y.4
Rostoks, N.5
Ramsay, L.6
Druka, A.7
Stein, N.8
Svensson, J.T.9
Wanamaker, S.10
Bozdag, S.11
Roose, M.L.12
Moscou, M.J.13
Chao, S.14
Varshney, R.K.15
Szucs, P.16
Sato, K.17
Hayes, P.M.18
Matthews, D.E.19
Kleinhofs, A.20
Muehlbauer, G.J.21
DeYoung, J.22
Marshall, D.F.23
Madishetty, K.24
Fenton, R.D.25
Condamine, P.26
Graner, A.27
Waugh, R.28
more..
-
58
-
-
66449120272
-
High-throughput genotyping by whole-genome resequencing
-
Huang, X., Feng, Q., Qian, Q., Zhao, Q., Wang, L., Wang, A., Guan, J., Fan, D., Weng, Q., Huang, T., Dong, G., Sang, T., and Han, B. (2009) High-throughput genotyping by whole-genome resequencing. Genome Res., 19, 1068-1076.
-
(2009)
Genome Res
, vol.19
, pp. 1068-1076
-
-
Huang, X.1
Feng, Q.2
Qian, Q.3
Zhao, Q.4
Wang, L.5
Wang, A.6
Guan, J.7
Fan, D.8
Weng, Q.9
Huang, T.10
Dong, G.11
Sang, T.12
Han, B.13
-
60
-
-
0033711956
-
A bacterial artificial chromosome library for barley (Hordeum vulgare Hordeum vulgare) and the identification of clones containing putative resistance genes
-
Yu, Y., Tomkins, J.P., Waugh, R., Frisch, D.A., Kudrna, D., Kleinhofs, A., Brueggeman, R.S., Muehlbauer, G.J., Wise, R.P., and Wing, R.A. (2000) A bacterial artificial chromosome library for barley (Hordeum vulgare Hordeum vulgare) and the identification of clones containing putative resistance genes. Theor. Appl. Genet., 101, 1093-1099.
-
(2000)
Theor. Appl. Genet
, vol.101
, pp. 1093-1099
-
-
Yu, Y.1
Tomkins, J.P.2
Waugh, R.3
Frisch, D.A.4
Kudrna, D.5
Kleinhofs, A.6
Brueggeman, R.S.7
Muehlbauer, G.J.8
Wise, R.P.9
Wing, R.A.10
-
61
-
-
20144363330
-
Direct targeting and rapid isolation of BAC clones spanning a defined chromosome region
-
Isidore, E., Scherrer, B., Bellec, A., Budin, K., Faivre-Rampant, P., Waugh, R., Keller, B., Caboche, M., Feuillet, C., and Chalhoub, B. (2005) Direct targeting and rapid isolation of BAC clones spanning a defined chromosome region. Funct. Integr. Genomics, 5, 97-103.
-
(2005)
Funct. Integr. Genomics
, vol.5
, pp. 97-103
-
-
Isidore, E.1
Scherrer, B.2
Bellec, A.3
Budin, K.4
Faivre-rampant, P.5
Waugh, R.6
Keller, B.7
Caboche, M.8
Feuillet, C.9
Chalhoub, B.10
-
62
-
-
33947242310
-
Construction and characterization of a bacterial artificial chromosome (BAC) library from the Japanese malting barley variety "Haruna Nijo"
-
Saisho, D., Myoraku, E., Kawasaki, S., Sato, K., and Takeda, K. (2007) Construction and characterization of a bacterial artificial chromosome (BAC) library from the Japanese malting barley variety "Haruna Nijo". Breeding Sci., 57, 29-38.
-
(2007)
Breeding Sci
, vol.57
, pp. 29-38
-
-
Saisho, D.1
Myoraku, E.2
Kawasaki, S.3
Sato, K.4
Takeda, K.5
-
63
-
-
77954447980
-
Construction of a barley bacterial artificial chromosome library suitable for cloning genes for boron tolerance, sodium exclusion and high grain zinc content
-
Shi, B.J., Sutton, T., Collins, N.C., Pallotta, M., and Langridge, P. (2010) Construction of a barley bacterial artificial chromosome library suitable for cloning genes for boron tolerance, sodium exclusion and high grain zinc content. Plant Breed., 129, 291-296.
-
(2010)
Plant Breed
, vol.129
, pp. 291-296
-
-
Shi, B.J.1
Sutton, T.2
Collins, N.C.3
Pallotta, M.4
Langridge, P.5
-
64
-
-
33644775672
-
Transcriptome analysis and physical mapping of barley genes in wheat: barley chromosome addition lines
-
Cho, S., Garvin, D.F., and Muehlbauer, G.J. (2006) Transcriptome analysis and physical mapping of barley genes in wheat: barley chromosome addition lines. Genetics, 172, 1277-1285.
-
(2006)
Genetics
, vol.172
, pp. 1277-1285
-
-
Cho, S.1
Garvin, D.F.2
Muehlbauer, G.J.3
-
65
-
-
33745500489
-
Genetic mapping and BAC assignment of EST-derived SSR markers shows non-uniform distribution of genes in the barley genome
-
Varshney, R.K., Grosse, I., Hahnel, U., Siefken, R., Prasad, M., Stein, N., Langridge, P., Altschmied, L., and Graner, A. (2006) Genetic mapping and BAC assignment of EST-derived SSR markers shows non-uniform distribution of genes in the barley genome. Theor. Appl. Genet., 113, 239-250.
-
(2006)
Theor. Appl. Genet
, vol.113
, pp. 239-250
-
-
Varshney, R.K.1
Grosse, I.2
Hahnel, U.3
Siefken, R.4
Prasad, M.5
Stein, N.6
Langridge, P.7
Altschmied, L.8
Graner, A.9
-
66
-
-
33846668211
-
An improved method to identify BAC clones using pooled Overgos
-
doi: 10.1093/nar/gkl920
-
Madishetty, K., Condamine, P., Svensson, J.T., Rodriguez, E., and Close, T.J. (2007) An improved method to identify BAC clones using pooled Overgos. Nucleic Acids Res., 35 (1), e5. doi: 10.1093/nar/gkl920
-
(2007)
Nucleic Acids Res
, vol.35
, Issue.1
-
-
Madishetty, K.1
Condamine, P.2
Svensson, J.T.3
Rodriguez, E.4
Close, T.J.5
-
67
-
-
84885831972
-
-
8 February
-
http://www.ipk-gatersleben.de/Internet/Forschung/Projekte/Barley (8 February 2011) .
-
(2011)
-
-
-
68
-
-
84885733754
-
Whole genome physical map of barley (Hordeum vulgare Hordeum vulgare)
-
Schulte, D., Ariyadasa, R., Poursarebani, N., Zhou, R., Sretenovic-Rajicic, T., Langridge, P., Shi, B.J., Mayer, K., Close, T., Weise, S., Scholtz, U., Graner, A., and Stein, S. (2010) Whole genome physical map of barley (Hordeum vulgare Hordeum vulgare). W343, Plant and Animal Genome XVIII Conference, January 9-13, San Diego.
-
(2010)
W343, Plant and Animal Genome XVIII Conference, January 9-13, San Diego
-
-
Schulte, D.1
Ariyadasa, R.2
Poursarebani, N.3
Zhou, R.4
Sretenovic-rajicic, T.5
Langridge, P.6
Shi, B.J.7
Mayer, K.8
Close, T.9
Weise, S.10
Scholtz, U.11
Graner, A.12
Stein, S.13
-
69
-
-
62649099646
-
The "inner circle" of the cereal genomes
-
Bolot, S., Abrouk, M., Masood-Quraishi, U., Stein, N., Messing, J., Feuillet, C., and Salse, J. (2009) The "inner circle" of the cereal genomes. Curr. Opin. Plant Biol., 12 (2), 119-125.
-
(2009)
Curr. Opin. Plant Biol
, vol.12
, Issue.2
, pp. 119-125
-
-
Bolot, S.1
Abrouk, M.2
Masood-quraishi, U.3
Stein, N.4
Messing, J.5
Feuillet, C.6
Salse, J.7
-
70
-
-
70349635850
-
Gene content and virtual gene order of barley chromosome 1H
-
Mayer, K.F.X., Taudien, S., Martis, M., Imkova, H., Suchankova, P., Gundlach, H., Wicker, T., Petzold, A., Felder, M., Steuernagel, B., Scholz, U., Graner, A., Platzer, M., Doleel, J., and Stein, N. (2009) Gene content and virtual gene order of barley chromosome 1H. Plant Physiol., 151, 496-505.
-
(2009)
Plant Physiol
, vol.151
, pp. 496-505
-
-
Mayer, K.F.X.1
Taudien, S.2
Martis, M.3
Imkova, H.4
Suchankova, P.5
Gundlach, H.6
Wicker, T.7
Petzold, A.8
Felder, M.9
Steuernagel, B.10
Scholz, U.11
Graner, A.12
Platzer, M.13
Doleel, J.14
Stein, N.15
-
71
-
-
78149496722
-
Inside the CBF locus in Poaceae
-
Tondelli, A., Francia, E., Barabaschi, D., Pasquariello, M., and Pecchioni, N. (2011) Inside the CBF locus in Poaceae. Plant Sci., 180, 39-45.
-
(2011)
Plant Sci
, vol.180
, pp. 39-45
-
-
Tondelli, A.1
Francia, E.2
Barabaschi, D.3
Pasquariello, M.4
Pecchioni, N.5
-
72
-
-
77952637117
-
Brachypodium distachyon genomics for sustainable food and fuel production
-
Bevan, M.W., Garvin, D.F., and Vogel, J.P. (2010) Brachypodium distachyon genomics for sustainable food and fuel production. Curr. Opin. Biotechnol., 21, 211-217.
-
(2010)
Curr. Opin. Biotechnol
, vol.21
, pp. 211-217
-
-
Bevan, M.W.1
Garvin, D.F.2
Vogel, J.P.3
-
73
-
-
76749150030
-
Genome sequencing and analysis of the model grass Brachypodium distachyon
-
The International Brachypodium Initiative
-
The International Brachypodium Initiative (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, 463, 763-768.
-
(2010)
Nature
, vol.463
, pp. 763-768
-
-
-
74
-
-
85047683772
-
Brachypodium distachyon: a new model system for functional genomics in grasses
-
Draper, J., Mur, L.A.J., Jenkins, G., Ghosh-Biswas, G.C., Bablak, P., Hasterok, R., and Routledge, A.P.M. (2001) Brachypodium distachyon: a new model system for functional genomics in grasses. Plant Physiol., 127, 1539-1555.
-
(2001)
Plant Physiol
, vol.127
, pp. 1539-1555
-
-
Draper, J.1
Mur, L.A.J.2
Jenkins, G.3
Ghosh-biswas, G.C.4
Bablak, P.5
Hasterok, R.6
Routledge, A.P.M.7
-
75
-
-
85056029481
-
Brachypodium distachyon: a new model system for structural and functional analysis of grass genomes
-
, in Model Plants and Crop Improvement(eds R.K. Varshney and R.M.D. Koebner), CRC Press, Boca Raton
-
Garvin, D.F. (2007) Brachypodium distachyon: a new model system for structural and functional analysis of grass genomes , in Model Plants and Crop Improvement(eds R.K. Varshney and R.M.D. Koebner), CRC Press, Boca Raton, pp. 109-124.
-
(2007)
, pp. 109-124
-
-
Garvin, D.F.1
-
76
-
-
41549089817
-
Highefficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3
-
Vogel, J.P. and Hill, T. (2008) Highefficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3. Plant Cell Rep., 27, 471-478.
-
(2008)
Plant Cell Rep
, vol.27
, pp. 471-478
-
-
Vogel, J.P.1
Hill, T.2
-
77
-
-
57049155443
-
Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR
-
Hong, S.J., Seo, P.J., Yang, M.S., Xiang, F., and Park, C.M. (2008) Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR. BMC Plant Biol., 8, 112.
-
(2008)
BMC Plant Biol
, vol.8
, pp. 112
-
-
Hong, S.J.1
Seo, P.J.2
Yang, M.S.3
Xiang, F.4
Park, C.M.5
-
78
-
-
78650063761
-
Natural variation of drought response in Brachypodium distachyon
-
Luo, N., Liua, J., Yub, X., and Jiang, Y. (2011) Natural variation of drought response in Brachypodium distachyon. Physiol. Plant., 141, 19-29.
-
(2011)
Physiol. Plant
, vol.141
, pp. 19-29
-
-
Luo, N.1
Liua, J.2
Yub, X.3
Jiang, Y.4
-
79
-
-
49349103817
-
Molecular aspects of abiotic stress in plants
-
Rodriguez, M., Canales, E., and BorrasHidalgo, O. (2005) Molecular aspects of abiotic stress in plants. Biotechnol. Appl., 22, 1-10.
-
(2005)
Biotechnol. Appl
, vol.22
, pp. 1-10
-
-
Rodriguez, M.1
Canales, E.2
BorrasHidalgo, O.3
-
80
-
-
0035058382
-
Transposons as tools for functional genomics
-
Ramachandran, S. and Sundaresan, V. (2001) Transposons as tools for functional genomics. Plant Physiol. Biochem., 39 (3-4), 243-252.
-
(2001)
Plant Physiol. Biochem
, vol.39
, Issue.3
, pp. 243-252
-
-
Ramachandran, S.1
Sundaresan, V.2
-
81
-
-
58149237006
-
Barley transformation using Agrobacterium-mediated techniques
-
Harwood, W.A., Bartlett, J.G., Alves, S.C., Perry, M., Smedley, M.A., Layland, N., and Snape, J.W. (2009) Barley transformation using Agrobacterium-mediated techniques. Methods Mol. Biol., 478, 137-147.
-
(2009)
Methods Mol. Biol
, vol.478
, pp. 137-147
-
-
Harwood, W.A.1
Bartlett, J.G.2
Alves, S.C.3
Perry, M.4
Smedley, M.A.5
Layland, N.6
Snape, J.W.7
-
82
-
-
33645127973
-
Genetic transformation of barley (Hordeum vulgare Hordeum vulgare) via infection of androgenetic pollen cultures with Agrobacterium tumefaciens
-
Kumlehn, J., Serazetdinova, L., Hensel, G., Becker, D., and Loerz, H. (2006) Genetic transformation of barley (Hordeum vulgare Hordeum vulgare) via infection of androgenetic pollen cultures with Agrobacterium tumefaciens. Plant Biotechnol. J., 4 (2), 251-261.
-
(2006)
Plant Biotechnol. J
, vol.4
, Issue.2
, pp. 251-261
-
-
Kumlehn, J.1
Serazetdinova, L.2
Hensel, G.3
Becker, D.4
Loerz, H.5
-
83
-
-
0033758490
-
An efficient method for dispersing Ds elements in the barley genome as a tool for determining gene function
-
Koprek, T., McElroy, D., Louwerse, J., Williams-Carrier, R., and Lemaux, P.G. (2000) An efficient method for dispersing Ds elements in the barley genome as a tool for determining gene function. Plant J., 24, 253-263.
-
(2000)
Plant J
, vol.24
, pp. 253-263
-
-
Koprek, T.1
McElroy, D.2
Louwerse, J.3
Williams-carrier, R.4
Lemaux, P.G.5
-
84
-
-
0035145759
-
Transposition of the maize transposable element Ac in barley (Hordeum vulgare Hordeum vulgare)
-
Scholz, S., Lorz, H., and Lutticke, S. (2001) Transposition of the maize transposable element Ac in barley (Hordeum vulgare Hordeum vulgare). Mol. Genet. Genomics, 264, 653-661.
-
(2001)
Mol. Genet. Genomics
, vol.264
, pp. 653-661
-
-
Scholz, S.1
Lorz, H.2
Lutticke, S.3
-
85
-
-
77952903335
-
Genomics and bioinformatics resources for crop improvement
-
Mochida, K. and Shinozaki, K. (2010) Genomics and bioinformatics resources for crop improvement. Plant Cell Physiol., 51 (4), 497-523.
-
(2010)
Plant Cell Physiol
, vol.51
, Issue.4
, pp. 497-523
-
-
Mochida, K.1
Shinozaki, K.2
-
86
-
-
34247546980
-
A barley activation tagging system
-
Ayliffe, M.A., Pallotta, M., Langridge, P., and Pryor, A.J. (2007) A barley activation tagging system. Plant Mol. Biol., 64, 329-347.
-
(2007)
Plant Mol. Biol
, vol.64
, pp. 329-347
-
-
Ayliffe, M.A.1
Pallotta, M.2
Langridge, P.3
Pryor, A.J.4
-
87
-
-
33750916343
-
High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals
-
Singh, J., Zhang, S., Chen, C., Cooper, L., Bregitzer, P., Sturbaum, A., Hayes, P.M., and Lemaux, P.G. (2006) High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals. Plant Mol. Biol., 62, 937-950.
-
(2006)
Plant Mol. Biol
, vol.62
, pp. 937-950
-
-
Singh, J.1
Zhang, S.2
Chen, C.3
Cooper, L.4
Bregitzer, P.5
Sturbaum, A.6
Hayes, P.M.7
Lemaux, P.G.8
-
88
-
-
33747080747
-
Mapped Ds/T-DNA launch pads for functional genomics in barley
-
Zhao, T., Pallotta, M., Langridge, P., Prasad, M., Graner, A., Schulze-Lefert, P., and Koprek, T. (2006) Mapped Ds/T-DNA launch pads for functional genomics in barley. Plant J., 47, 811-826.
-
(2006)
Plant J
, vol.47
, pp. 811-826
-
-
Zhao, T.1
Pallotta, M.2
Langridge, P.3
Prasad, M.4
Graner, A.5
Schulze-lefert, P.6
Koprek, T.7
-
89
-
-
20444438026
-
Abiotic stress tolerance in grasses: from model plants to crop plants
-
Tester, M. and Bacic, A. (2005) Abiotic stress tolerance in grasses: from model plants to crop plants. Plant Physiol., 137, 791-793.
-
(2005)
Plant Physiol
, vol.137
, pp. 791-793
-
-
Tester, M.1
Bacic, A.2
-
90
-
-
17044385046
-
Recent advances in engineering plant tolerance to abiotic stress: achievements and limitations
-
Vinocur, B. and Altman, A. (2005) Recent advances in engineering plant tolerance to abiotic stress: achievements and limitations. Curr. Opin. Biotechnol., 16, 123-132.
-
(2005)
Curr. Opin. Biotechnol
, vol.16
, pp. 123-132
-
-
Vinocur, B.1
Altman, A.2
-
91
-
-
78650911981
-
Improvement of stress tolerance of wheat and barley by modulation of expression of DREB/CBF factors
-
Morran, S., Eini, O., Pyvovarenko, T., Parent, B., Singh, R., Ismagul, A., Eliby, S., Sfirley, N., Langridge, P., and Lopato, S. (2011) Improvement of stress tolerance of wheat and barley by modulation of expression of DREB/CBF factors. Plant Biotechnol. J., 9, 230-249.
-
(2011)
Plant Biotechnol. J
, vol.9
, pp. 230-249
-
-
Morran, S.1
Eini, O.2
Pyvovarenko, T.3
Parent, B.4
Singh, R.5
Ismagul, A.6
Eliby, S.7
Sfirley, N.8
Langridge, P.9
Lopato, S.10
-
92
-
-
6344240350
-
Engineering high-level aluminum tolerance in barley with the ALMT1 gene
-
Delhaize, E., Ryan, P.R., Hebb, D.M., Yamamoto, Y., Sasaki, T., and Matsumoto, H. (2004) Engineering high-level aluminum tolerance in barley with the ALMT1 gene. Proc. Natl. Acad. Sci. USA, 202 (42), 15249-15254.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.202
, Issue.42
, pp. 15249-15254
-
-
Delhaize, E.1
Ryan, P.R.2
Hebb, D.M.3
Yamamoto, Y.4
Sasaki, T.5
Matsumoto, H.6
-
93
-
-
0030021536
-
Expression of a late embryogenesis abundant protein gene, HVA1, from barley confers tolerance to water deficit and salt stress in transgenic rice
-
Xu, D., Duna, X., Wang, B., Hong, B., Ho, T.H.D., and Wu, R. (1996) Expression of a late embryogenesis abundant protein gene, HVA1, from barley confers tolerance to water deficit and salt stress in transgenic rice. Plant Physiol., 110 (1), 249-257.
-
(1996)
Plant Physiol
, vol.110
, Issue.1
, pp. 249-257
-
-
Xu, D.1
Duna, X.2
Wang, B.3
Hong, B.4
Ho, T.H.D.5
Wu, R.6
-
94
-
-
1542291159
-
HVA1, a LEA gene from barley confers dehydration tolerance in transgenic rice (Oryza sativa Oryza sativa) via cell membrane protection
-
Babu, R.C., Zhang, J., Blum, A., Ho, T.H.D., We, R., and Nguyen, H.T. (2004) HVA1, a LEA gene from barley confers dehydration tolerance in transgenic rice (Oryza sativa Oryza sativa) via cell membrane protection. Plant Sci., 166, 855-862.
-
(2004)
Plant Sci
, vol.166
, pp. 855-862
-
-
Babu, R.C.1
Zhang, J.2
Blum, A.3
Ho, T.H.D.4
We, R.5
Nguyen, H.T.6
-
95
-
-
34547584433
-
Expression of barley HvCBF4 enhances tolerance to abiotic stress in transgenic rice
-
Oh, S.J., Kwon, C.W., Choi, D.W., Song, S.L., and Kim, J.K. (2007) Expression of barley HvCBF4 enhances tolerance to abiotic stress in transgenic rice. Plant Biotechnol. J., 5 (5), 646-656.
-
(2007)
Plant Biotechnol. J
, vol.5
, Issue.5
, pp. 646-656
-
-
Oh, S.J.1
Kwon, C.W.2
Choi, D.W.3
Song, S.L.4
Kim, J.K.5
-
96
-
-
33845777956
-
Protein polyubiquitination plays a role in basal host resistance of barley
-
Dong, W., Nowara, D., and Schweizer, P. (2006) Protein polyubiquitination plays a role in basal host resistance of barley. Plant Cell, 18, 3321-3331.
-
(2006)
Plant Cell
, vol.18
, pp. 3321-3331
-
-
Dong, W.1
Nowara, D.2
Schweizer, P.3
-
97
-
-
33847254952
-
Nuclear activity of MLA immune receptors links isolate-specific and basal disease-resistance responses
-
Shen, Q.H., Saijo, Y., Mauch, S., Biskup, C., Bieri, S., Keller, B., Seki, H., Ulker, B., Somssich, I.E., and Schulze-Lefert, P. (2007) Nuclear activity of MLA immune receptors links isolate-specific and basal disease-resistance responses. Science, 315 (5815), 1098-1103.
-
(2007)
Science
, vol.315
, Issue.5815
, pp. 1098-1103
-
-
Shen, Q.H.1
Saijo, Y.2
Mauch, S.3
Biskup, C.4
Bieri, S.5
Keller, B.6
Seki, H.7
Ulker, B.8
Somssich, I.E.9
Schulze-lefert, P.10
-
98
-
-
23044467579
-
A high-throughput gene-silencing system for the functional assessment of defense related genes in barley epidermal cells
-
Douchkov, D., Nowara, D., Zierold, U., and Schweizer, P. (2005) A high-throughput gene-silencing system for the functional assessment of defense related genes in barley epidermal cells. Mol. Plant Microbe Interact., 18, 755-761.
-
(2005)
Mol. Plant Microbe Interact
, vol.18
, pp. 755-761
-
-
Douchkov, D.1
Nowara, D.2
Zierold, U.3
Schweizer, P.4
-
99
-
-
51749084690
-
A transient assay system for the assessment of cell autonomous gene function in dehydration-stressed barley
-
Marzin, S., Mihaly, R., Pauk, J., and Schweizer, P. (2008) A transient assay system for the assessment of cell autonomous gene function in dehydration-stressed barley. J. Exp. Bot., 59 (12), 3359-3369.
-
(2008)
J. Exp. Bot
, vol.59
, Issue.12
, pp. 3359-3369
-
-
Marzin, S.1
Mihaly, R.2
Pauk, J.3
Schweizer, P.4
-
100
-
-
61449224743
-
An Ac/ Ds-mediated gene trap system for functional genomics in barley
-
Lazarow, K. and Lutticke, S. (2009) An Ac/ Ds-mediated gene trap system for functional genomics in barley. BMC Genomics, 10, 55.
-
(2009)
BMC Genomics
, vol.10
, pp. 55
-
-
Lazarow, K.1
Lutticke, S.2
-
101
-
-
4844222798
-
The potential of virus-induced gene silencing for speeding up the functional characterization of plant genes
-
Vagner, A.B., Visser, P.B., Angenent, G.C., and Krens, F.A. (2004) The potential of virus-induced gene silencing for speeding up the functional characterization of plant genes. Genet. Mol. Res., 3 (3), 323-341.
-
(2004)
Genet. Mol. Res
, vol.3
, Issue.3
, pp. 323-341
-
-
Vagner, A.B.1
Visser, P.B.2
Angenent, G.C.3
Krens, F.A.4
-
102
-
-
0032716844
-
Homology dependent gene silencing in plants and fungi: a number of variations on the same theme
-
Cogoni, C. and Macino, G. (1999) Homology dependent gene silencing in plants and fungi: a number of variations on the same theme. Curr. Opin. Microbiol., 2 (6), 657-662.
-
(1999)
Curr. Opin. Microbiol
, vol.2
, Issue.6
, pp. 657-662
-
-
Cogoni, C.1
Macino, G.2
-
103
-
-
0034699247
-
Total silencing by intron-spliced hairpin RNAs
-
Smith, N.A., Singh, S.P., Wang, M.B., Stoutjesdijk, P.A., Green, A.G., and Waterhouse, P.M. (2000) Total silencing by intron-spliced hairpin RNAs. Nature, 407, 319-320.
-
(2000)
Nature
, vol.407
, pp. 319-320
-
-
Smith, N.A.1
Singh, S.P.2
Wang, M.B.3
Stoutjesdijk, P.A.4
Green, A.G.5
Waterhouse, P.M.6
-
104
-
-
0001412080
-
A single copy of a virus-derived transgene encoding hairpin RNA gives immunity to barley yellow dwarf virus
-
Wang, M.B., Abbott, D.C., and Waterhouse, P.M. (2000) A single copy of a virus-derived transgene encoding hairpin RNA gives immunity to barley yellow dwarf virus. Mol. Plant Pathol., 1 (6), 347-356.
-
(2000)
Mol. Plant Pathol
, vol.1
, Issue.6
, pp. 347-356
-
-
Wang, M.B.1
Abbott, D.C.2
Waterhouse, P.M.3
-
105
-
-
0038706305
-
A chemical-regulated inducible RNAi system in plants
-
Guo, H.S., Fei, J.F., Xie, Q., and Chua, N.H. (2003) A chemical-regulated inducible RNAi system in plants. Plant J., 34, 383-392.
-
(2003)
Plant J
, vol.34
, pp. 383-392
-
-
Guo, H.S.1
Fei, J.F.2
Xie, Q.3
Chua, N.H.4
-
106
-
-
0038806468
-
Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis
-
Hiratsu, K., Matsui, K., Koyama, T., and Ohme-Takagi, M. (2003) Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis. Plant J., 34, 733-739.
-
(2003)
Plant J
, vol.34
, pp. 733-739
-
-
Hiratsu, K.1
Matsui, K.2
Koyama, T.3
Ohme-takagi, M.4
-
107
-
-
45149112228
-
A novel NAC transcription factor, IDEF2, that recognizes the iron deficiency-responsive element 2 regulates the genes involved in iron homeostasis in plants
-
Ogo, Y., Kobayashi, T., Nakanishi Itai, R., Nakanishi, H., Kakei, Y., Takahashi, M., Toki, S., Mori, S., and Nishizawa, N.K. (2008) A novel NAC transcription factor, IDEF2, that recognizes the iron deficiency-responsive element 2 regulates the genes involved in iron homeostasis in plants. J. Biol. Chem., 283 (19), 13407-13417.
-
(2008)
J. Biol. Chem
, vol.283
, Issue.19
, pp. 13407-13417
-
-
Ogo, Y.1
Kobayashi, T.2
Itai, N.R.3
Nakanishi, H.4
Kakei, Y.5
Takahashi, M.6
Toki, S.7
Mori, S.8
Nishizawa, N.K.9
-
108
-
-
78149497123
-
Natural variation in the freezing tolerance of Arabidopsis thaliana: effects of RNAi-induced CBF depletion and QTL localisation vary among accessions
-
Gery, C., Zuther, E., Schulz, E., Legoupi, J., Chauveau, A., McKhann, H., Hincha, D.K., and Téoulé, E. (2011) Natural variation in the freezing tolerance of Arabidopsis thaliana: effects of RNAi-induced CBF depletion and QTL localisation vary among accessions. Plant Sci., 180, 12-23.
-
(2011)
Plant Sci
, vol.180
, pp. 12-23
-
-
Gery, C.1
Zuther, E.2
Schulz, E.3
Legoupi, J.4
Chauveau, A.5
McKhann, H.6
Hincha, D.K.7
Téoulé, E.8
-
109
-
-
77952664598
-
Virus induced gene silencing in Brachypodium distachyon: a model organism for cereals
-
Demircan, T. and Akkaya, M.S. (2010) Virus induced gene silencing in Brachypodium distachyon: a model organism for cereals. Plant Cell Tissue Organ Cult., 100, 91-96.
-
(2010)
Plant Cell Tissue Organ Cult
, vol.100
, pp. 91-96
-
-
Demircan, T.1
Akkaya, M.S.2
-
110
-
-
0036112232
-
Barley stripe mosaic virus-induced gene silencing in a monocot plant
-
Holzberg, S., Brosio, P., Gross, C., and Pogue, G.P. (2002) Barley stripe mosaic virus-induced gene silencing in a monocot plant. Plant J., 30, 315-327.
-
(2002)
Plant J
, vol.30
, pp. 315-327
-
-
Holzberg, S.1
Brosio, P.2
Gross, C.3
Pogue, G.P.4
-
111
-
-
34548444552
-
Virus-induced gene silencing of P23k in barley leaf reveals morphological changes involved in secondary wall formation
-
Oikawa, A., Rahman, A., Yamashita, T., Taira, H., and Kidou, S. (2007) Virus-induced gene silencing of P23k in barley leaf reveals morphological changes involved in secondary wall formation. J. Exp. Bot., 58, 2617-2625.
-
(2007)
J. Exp. Bot
, vol.58
, pp. 2617-2625
-
-
Oikawa, A.1
Rahman, A.2
Yamashita, T.3
Taira, H.4
Kidou, S.5
-
112
-
-
26944493259
-
Virus-induced gene silencing-vased functional characterization of genes associated with powdery mildew resistance in barley
-
Hein, I., Barciszewska-Pacak, M., Hrubikova, K., Williamson, S., Dinesen, M., Soenderby, I.E., Sundar, S., Jarmolowski, A., Shirasu, K., and Lacomme, C. (2005) Virus-induced gene silencing-vased functional characterization of genes associated with powdery mildew resistance in barley. Plant Physiol., 138, 2155-2164.
-
(2005)
Plant Physiol
, vol.138
, pp. 2155-2164
-
-
Hein, I.1
Barciszewska-pacak, M.2
Hrubikova, K.3
Williamson, S.4
Dinesen, M.5
Soenderby, I.E.6
Sundar, S.7
Jarmolowski, A.8
Shirasu, K.9
Lacomme, C.10
-
113
-
-
5144232519
-
A structured mutant population for forward and reverse genetics in barley (Hordeum vulgare Hordeum vulgare)
-
Caldwell, D.G., McCallum, N., Shaw, P., Muehlbauer, G.J., Marshall, D.F., and Waugh, R. (2004) A structured mutant population for forward and reverse genetics in barley (Hordeum vulgare Hordeum vulgare). Plant J., 40 (1), 143-150.
-
(2004)
Plant J
, vol.40
, Issue.1
, pp. 143-150
-
-
Caldwell, D.G.1
McCallum, N.2
Shaw, P.3
Muehlbauer, G.J.4
Marshall, D.F.5
Waugh, R.6
-
114
-
-
77049093783
-
TILLING in the two-rowed barley cultivar "Barke" reveals preferred sites of functional diversity in the gene HvHox1
-
Gottwald, S., Bauer, P., Komatsuda, T., Lundqvist, U., and Stein, N. (2009) TILLING in the two-rowed barley cultivar "Barke" reveals preferred sites of functional diversity in the gene HvHox1. BMC Res. Note, 2, 258.
-
(2009)
BMC Res. Note
, vol.2
, pp. 258
-
-
Gottwald, S.1
Bauer, P.2
Komatsuda, T.3
Lundqvist, U.4
Stein, N.5
-
115
-
-
84885780841
-
-
8 February
-
http://www.distagenomics.unibo.it/TILLMore/ (8 February 2011) .
-
(2011)
-
-
-
116
-
-
43449100324
-
TILLMore, a resource for the discovery of chemically induced mutants in barley
-
Talamè, V., Bovina, R., Sanguineti, M.C., Tuberosa, R., Lundqvist, U., and Salvi, S. (2008) TILLMore, a resource for the discovery of chemically induced mutants in barley. Plant Biotechnol. J., 6 (5), 477-485.
-
(2008)
Plant Biotechnol. J
, vol.6
, Issue.5
, pp. 477-485
-
-
Talamè, V.1
Bovina, R.2
Sanguineti, M.C.3
Tuberosa, R.4
Lundqvist, U.5
Salvi, S.6
-
117
-
-
68949097695
-
Identification of barley mutants in the cultivar "Lux" at the Dhn loci through TILLING
-
Lababidi, S., Mejlhede, N., Rasmussen, S.K., Backes, G., Al-Said, W., Baum, M., and Jahoor, A.J. (2009) Identification of barley mutants in the cultivar "Lux" at the Dhn loci through TILLING. Plant Breed., 128, 332-336.
-
(2009)
Plant Breed
, vol.128
, pp. 332-336
-
-
Lababidi, S.1
Mejlhede, N.2
Rasmussen, S.K.3
Backes, G.4
Al-said, W.5
Baum, M.6
Jahoor, A.J.7
-
118
-
-
57749195712
-
RNA-seq: a revolutionary tool for transcriptomics
-
Wang, Z., Gerstein, M., and Snyder, M. (2009) RNA-seq: a revolutionary tool for transcriptomics. Nat. Rev., 10, 57-63.
-
(2009)
Nat. Rev
, vol.10
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
119
-
-
77951998724
-
Exploring plant transcriptomes using ultra high-throughput sequencing
-
Wang, L., Li, P., and Brutnell, P. (2010) Exploring plant transcriptomes using ultra high-throughput sequencing. Brief. Funct. Genomics, 9 (2), 118-128.
-
(2010)
Brief. Funct. Genomics
, vol.9
, Issue.2
, pp. 118-128
-
-
Wang, L.1
Li, P.2
Brutnell, P.3
-
120
-
-
12144290861
-
A new resource for cereal genomics: 22k barley GeneChip comes of age
-
Close, T.J., Wanamaker, S.I., Caldo, R.A., Turner, S.M., Ashlock, D.A., Dickerson, J.A., Wing, R.A., Muehlbauer, G.J., Kleinhofs, A., and Wise, R.P. (2004) A new resource for cereal genomics: 22k barley GeneChip comes of age. Plant Physiol., 134, 960-968.
-
(2004)
Plant Physiol
, vol.134
, pp. 960-968
-
-
Close, T.J.1
Wanamaker, S.I.2
Caldo, R.A.3
Turner, S.M.4
Ashlock, D.A.5
Dickerson, J.A.6
Wing, R.A.7
Muehlbauer, G.J.8
Kleinhofs, A.9
Wise, R.P.10
-
121
-
-
40549133868
-
BarleyBase/PLEXdb: a unified expression profiling database for plants and plant pathogens
-
in Plant Bioinformatics: Methods and Protocols (ed. D. Edwards), Methods in Molecular Biology, Humana Press, Totowa
-
Wise, R., Caldo, R., Hong, L., Shen, L., Cannon, E., and Dickerson, J. (2007) BarleyBase/PLEXdb: a unified expression profiling database for plants and plant pathogens, in Plant Bioinformatics: Methods and Protocols (ed. D. Edwards), Methods in Molecular Biology, Humana Press, Totowa, pp. 347-363.
-
(2007)
, pp. 347-363
-
-
Wise, R.1
Caldo, R.2
Hong, L.3
Shen, L.4
Cannon, E.5
Dickerson, J.6
-
122
-
-
68049095834
-
Comparative transcriptomics in the Triticeae
-
Schreiber, A.W., Sutton, T., Caldo, R.A., Kalashyan, E., Lovell, B., Mayo, G., Muehlbauer, G., Druka, A., Waugh, R., Wise, R., Langridge, P., and Baumann, U. (2009) Comparative transcriptomics in the Triticeae. BMC Genomics, 10, 285.
-
(2009)
BMC Genomics
, vol.10
, pp. 285
-
-
Schreiber, A.W.1
Sutton, T.2
Caldo, R.A.3
Kalashyan, E.4
Lovell, B.5
Mayo, G.6
Muehlbauer, G.7
Druka, A.8
Waugh, R.9
Wise, R.10
Langridge, P.11
Baumann, U.12
-
123
-
-
58749109023
-
Genevestigator V3: a reference expression database for the meta-analysis of transcriptomes
-
doi: 10.1155/2008/420747
-
Hruz, T., Laule, O., Szabo, G., Wessendorp, F., Bleuler, S., Oertle, L., Widmayer, P., Gruissem, W., and Zimmermann, P. (2008) Genevestigator V3: a reference expression database for the meta-analysis of transcriptomes. Adv. Bioinformatics. doi: 10.1155/2008/420747
-
(2008)
Adv. Bioinformatics
-
-
Hruz, T.1
Laule, O.2
Szabo, G.3
Wessendorp, F.4
Bleuler, S.5
Oertle, L.6
Widmayer, P.7
Gruissem, W.8
Zimmermann, P.9
-
124
-
-
33847626433
-
Identification of transcripts potentially involved in barley seed germination and dormancy using cDNA-AFLP
-
Leymarie, J., Bruneaux, E., Gibot-Leclerc, S., and Corbineau, F. (2007) Identification of transcripts potentially involved in barley seed germination and dormancy using cDNA-AFLP. J. Exp. Bot., 58 (3), 425-437.
-
(2007)
J. Exp. Bot
, vol.58
, Issue.3
, pp. 425-437
-
-
Leymarie, J.1
Bruneaux, E.2
Gibot-leclerc, S.3
Corbineau, F.4
-
125
-
-
33645501721
-
Abundant transcripts of malting barley identified by serial analysis of gene expression (SAGE)
-
White, J., Pacey-Miller, T., Crawford, A., Cordeiro, G., Barbary, D., Bundock, P., and Henry, R. (2006) Abundant transcripts of malting barley identified by serial analysis of gene expression (SAGE). Plant Biotechnol. J., 4, 289-301.
-
(2006)
Plant Biotechnol. J
, vol.4
, pp. 289-301
-
-
White, J.1
Pacey-miller, T.2
Crawford, A.3
Cordeiro, G.4
Barbary, D.5
Bundock, P.6
Henry, R.7
-
126
-
-
34547883140
-
iGentifier: indexing and large-scale profiling of unknown transcriptomes
-
Fischer, A., Lenhard, A., Tronecker, H., Lorat, Y., Kraenzle, M., Sorgenfrei, O., Zeppenfeld, T., Haushalter, M., Vogt, G., Gruene, U., Meyer, A., Handlbichler, U., Schweizer, P., and Gaelweiler, L. (2007) iGentifier: indexing and large-scale profiling of unknown transcriptomes. Nucleic Acids Res., 35 (14), 4640-4648.
-
(2007)
Nucleic Acids Res
, vol.35
, Issue.14
, pp. 4640-4648
-
-
Fischer, A.1
Lenhard, A.2
Tronecker, H.3
Lorat, Y.4
Kraenzle, M.5
Sorgenfrei, O.6
Zeppenfeld, T.7
Haushalter, M.8
Vogt, G.9
Gruene, U.10
Meyer, A.11
Handlbichler, U.12
Schweizer, P.13
Gaelweiler, L.14
-
127
-
-
34548128406
-
SNP discovery via 454 transcriptome sequencing
-
Barbazuk, W.B., Emrich, S.J., Chen, H.D., Li, L., and Schnable, P.S. (2007) SNP discovery via 454 transcriptome sequencing. Plant J., 51 (5), 910-918.
-
(2007)
Plant J
, vol.51
, Issue.5
, pp. 910-918
-
-
Barbazuk, W.B.1
Emrich, S.J.2
Chen, H.D.3
Li, L.4
Schnable, P.S.5
-
128
-
-
34250666153
-
Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing
-
Weber, A.P.M., Weber, K.L., Carr, K., Wilkerson, C., and Ohlrogge, J.B. (2007) Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing. Plant Physiol., 144, 32-42.
-
(2007)
Plant Physiol
, vol.144
, pp. 32-42
-
-
Weber, A.P.M.1
Weber, K.L.2
Carr, K.3
Wilkerson, C.4
Ohlrogge, J.B.5
-
129
-
-
33751017957
-
Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology
-
Cheung, F., Haas, B.J., Goldberg, S.M., May, G.D., Xiao, Y., and Town, C.D. (2006) Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology. BMC Genomics, 7, 272.
-
(2006)
BMC Genomics
, vol.7
, pp. 272
-
-
Cheung, F.1
Haas, B.J.2
Goldberg, S.M.3
May, G.D.4
Xiao, Y.5
Town, C.D.6
-
130
-
-
77953600890
-
Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types
-
Guo, S., Zheng, Y., Joung, J.-G., Liu, S., Zhang, Z., Crasta, O.R., Sobral, B.W., Xu, Y., Huang, S., and Fei, Z. (2010) Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types. BMC Genomics, 11, 384.
-
(2010)
BMC Genomics
, vol.11
, pp. 384
-
-
Guo, S.1
Zheng, Y.2
Joung, J.-G.3
Liu, S.4
Zhang, Z.5
Crasta, O.R.6
Sobral, B.W.7
Xu, Y.8
Huang, S.9
Fei, Z.10
-
131
-
-
77955214742
-
RNA-Seq atlas of Glycine max
-
Severin, A.J., Woody, J.L., Bolon, Y.T., Joseph, B., Diers, B.W., Farmer, A.D., Muehlbauer, G.J., Nelson, R.T., Grant, D., Specht, J.E., Graham, M.A., Cannon, S.B., May, G.D., Vance, C.P., and Shoemaker, R.C. (2010) RNA-Seq atlas of Glycine max. a guide to the soybean transcriptome. BMC Plant Biol., 10, 160.
-
(2010)
a guide to the soybean transcriptome. BMC Plant Biol
, vol.10
, pp. 160
-
-
Severin, A.J.1
Woody, J.L.2
Bolon, Y.T.3
Joseph, B.4
Diers, B.W.5
Farmer, A.D.6
Muehlbauer, G.J.7
Nelson, R.T.8
Grant, D.9
Specht, J.E.10
Graham, M.A.11
Cannon, S.B.12
May, G.D.13
Vance, C.P.14
Shoemaker, R.C.15
-
132
-
-
84866170116
-
Challenges and strategies for next generation sequencing (NGS) data analysis
-
Thakur, V. and Varshney, R. (2010) Challenges and strategies for next generation sequencing (NGS) data analysis. J. Comput. Sci. Syst. Biol., 3 (2), 40-42.
-
(2010)
J. Comput. Sci. Syst. Biol
, vol.3
, Issue.2
, pp. 40-42
-
-
Thakur, V.1
Varshney, R.2
-
133
-
-
84885707581
-
-
8 February
-
http://www.public.iastate.edu/~imagefpc/IBSC%20Webpage/IBSC%20Template-publications.html (8 February 2011) .
-
(2011)
-
-
-
134
-
-
0035696449
-
Expressed sequence tags from cold-acclimatized barley can identify novel plant genes
-
Faccioli, P., Pecchioni, N., Cattivelli, L., Stanca, A.M., and Terzi, V. (2001) Expressed sequence tags from cold-acclimatized barley can identify novel plant genes. Plant Breed., 120, 497-502.
-
(2001)
Plant Breed
, vol.120
, pp. 497-502
-
-
Faccioli, P.1
Pecchioni, N.2
Cattivelli, L.3
Stanca, A.M.4
Terzi, V.5
-
135
-
-
18744375994
-
Analysis of differential expression of barley ESTs during cold acclimatization using microarray technology
-
Faccioli, P., Lagonigro, M.S., De Checco, L., Stanca, A.M., Alberici, R., and Terzi, V. (2002) Analysis of differential expression of barley ESTs during cold acclimatization using microarray technology. Plant Biol., 4, 630-639.
-
(2002)
Plant Biol
, vol.4
, pp. 630-639
-
-
Faccioli, P.1
Lagonigro, M.S.2
Checco, D.L.3
Stanca, A.M.4
Alberici, R.5
Terzi, V.6
-
136
-
-
4644250562
-
Large scale analysis of transcripts abundance in barley subjected to several single and combined abiotic stress conditions
-
Atienza, S.G., Faccioli, P., Perrotta, G., Dalfino, G., Zschiesche, W., Humbeck, K., Stanca, A.M., and Cattivelli, L. (2004) Large scale analysis of transcripts abundance in barley subjected to several single and combined abiotic stress conditions. Plant Sci., 167, 1359-1365.
-
(2004)
Plant Sci
, vol.167
, pp. 1359-1365
-
-
Atienza, S.G.1
Faccioli, P.2
Perrotta, G.3
Dalfino, G.4
Zschiesche, W.5
Humbeck, K.6
Stanca, A.M.7
Cattivelli, L.8
-
137
-
-
52349092299
-
Dehydrin gene expression provides an indicator of low temperature and drought stress: transcriptome-based analysis of barley (Hordeum vulgare Hordeum vulgare)
-
Tommasini, L., Svensson, J.T., Rodriguez, E.M., Wahid, A., Malatrasi, M., Kato, K., Wanamaker, S., Resnik, J., and Close, T.J. (2008) Dehydrin gene expression provides an indicator of low temperature and drought stress: transcriptome-based analysis of barley (Hordeum vulgare Hordeum vulgare). Funct. Integr. Genomics, 8, 387-405.
-
(2008)
Funct. Integr. Genomics
, vol.8
, pp. 387-405
-
-
Tommasini, L.1
Svensson, J.T.2
Rodriguez, E.M.3
Wahid, A.4
Malatrasi, M.5
Kato, K.6
Wanamaker, S.7
Resnik, J.8
Close, T.J.9
-
138
-
-
0037322989
-
Cor gene expression in barley mutants affected in chloroplast development and photosynthetic electron transport
-
Dal Bosco, C., Busconi, M., Govoni, C., Baldi, P., Stanca, A.M., Crosatti, C., Bassi, R., and Cattivelli, L. (2003) Cor gene expression in barley mutants affected in chloroplast development and photosynthetic electron transport. Plant Physiol., 131, 793-802.
-
(2003)
Plant Physiol
, vol.131
, pp. 793-802
-
-
Bosco, D.C.1
Busconi, M.2
Govoni, C.3
Baldi, P.4
Stanca, A.M.5
Crosatti, C.6
Bassi, R.7
Cattivelli, L.8
-
139
-
-
33745450468
-
Transcriptome analysis of cold acclimation in barley Albina and Xantha mutants
-
Svensson, J.T., Crosatti, C., Campoli, C., Bassi, R., Stanca, A.M., Close, T.J., and Cattivelli, L. (2006) Transcriptome analysis of cold acclimation in barley Albina and Xantha mutants. Plant Physiol., 141, 257-270.
-
(2006)
Plant Physiol
, vol.141
, pp. 257-270
-
-
Svensson, J.T.1
Crosatti, C.2
Campoli, C.3
Bassi, R.4
Stanca, A.M.5
Close, T.J.6
Cattivelli, L.7
-
140
-
-
33846837504
-
Barley transcript profiles under dehydration shock and drought stress treatments: a comparative analysis
-
Talamè, V., Ozturk, N.Z., Bohnert, H.J., and Tuberosa, R. (2007) Barley transcript profiles under dehydration shock and drought stress treatments: a comparative analysis. J. Exp. Bot., 58 (2), 229-240.
-
(2007)
J. Exp. Bot
, vol.58
, Issue.2
, pp. 229-240
-
-
Talamè, V.1
Ozturk, N.Z.2
Bohnert, H.J.3
Tuberosa, R.4
-
141
-
-
0036010936
-
Monitoring large-scale changes in transcript abundance in drought- and salt-stressed barley
-
Ozturk, Z.N., Talamè, V., Deyholos, M., Michalowski, C.B., Galbraith, D.W., Gozukirmizi, N., Tuberosa, R., and Bohnert, H.J. (2002) Monitoring large-scale changes in transcript abundance in drought- and salt-stressed barley. Plant Mol. Biol., 48 (5-6), 551-573.
-
(2002)
Plant Mol. Biol
, vol.48
, Issue.5
, pp. 551-573
-
-
Ozturk, Z.N.1
Talamè, V.2
Deyholos, M.3
Michalowski, C.B.4
Galbraith, D.W.5
Gozukirmizi, N.6
Tuberosa, R.7
Bohnert, H.J.8
-
142
-
-
36448995026
-
The barley microarray: a community vision and application to abiotic stress
-
Close, T.J. (2005) The barley microarray: a community vision and application to abiotic stress. Czech J. Genet. Plant Breed., 41 (4), 144-152.
-
(2005)
Czech J. Genet. Plant Breed
, vol.41
, Issue.4
, pp. 144-152
-
-
Close, T.J.1
-
143
-
-
34247201682
-
Identification of a novel gene (Hsdr4) involved in water-stress tolerance in wild barley
-
Suprunova, T., Krugman, T., Distelfeld, A., Fahima, T., Nevo, E., and Korol, A. (2007) Identification of a novel gene (Hsdr4) involved in water-stress tolerance in wild barley. Plant Mol. Biol., 64, 17-34.
-
(2007)
Plant Mol. Biol
, vol.64
, pp. 17-34
-
-
Suprunova, T.1
Krugman, T.2
Distelfeld, A.3
Fahima, T.4
Nevo, E.5
Korol, A.6
-
144
-
-
67649531708
-
Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage
-
Guo, P., Baum, M., Grando, S., Ceccarelli, S., Bai, G., Li, R., von Korff, M., Graner, A., and Valcoun, J. (2009) Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage. J. Exp. Bot., 60, 3531-3544.
-
(2009)
J. Exp. Bot
, vol.60
, pp. 3531-3544
-
-
Guo, P.1
Baum, M.2
Grando, S.3
Ceccarelli, S.4
Bai, G.5
Li, R.6
Korff, V.M.7
Graner, A.8
Valcoun, J.9
-
145
-
-
77955925113
-
Drought response in the spikes of barley: gene expression in the lemma, palea, awn, and seed
-
Abebe, T., Melmaiee, K., Berg, V., and Wise, R.P. (2010) Drought response in the spikes of barley: gene expression in the lemma, palea, awn, and seed. Funct. Integr. Genomics, 10, 191-205.
-
(2010)
Funct. Integr. Genomics
, vol.10
, pp. 191-205
-
-
Abebe, T.1
Melmaiee, K.2
Berg, V.3
Wise, R.P.4
-
146
-
-
23044534092
-
Analysis of salt-inducible genes in barley roots by differential display
-
Ueda, A., Shi, W., Nakamura, T., and Takabe, T. (2002) Analysis of salt-inducible genes in barley roots by differential display. J. Plant Res., 115, 119-130.
-
(2002)
J. Plant Res
, vol.115
, pp. 119-130
-
-
Ueda, A.1
Shi, W.2
Nakamura, T.3
Takabe, T.4
-
147
-
-
5144227438
-
Osmotic stress in barley regulates expression of a different set of genes than salt stress does
-
Ueda, A., Kathiresan, A., Inada, M., Narita, Y., Nakamura, T., Shi, W., Takabe, T., and Bennett, J. (2004) Osmotic stress in barley regulates expression of a different set of genes than salt stress does. J. Exp. Bot., 55 (406), 2213-2218.
-
(2004)
J. Exp. Bot
, vol.55
, Issue.406
, pp. 2213-2218
-
-
Ueda, A.1
Kathiresan, A.2
Inada, M.3
Narita, Y.4
Nakamura, T.5
Shi, W.6
Takabe, T.7
Bennett, J.8
-
148
-
-
33644533829
-
Expression analysis of barley (Hordeum vulgare Hordeum vulgare) during salinity stress
-
Walia, H., Wilson, C., Wahid, A., Condamine, P., Cui, X., and Close, T.J. (2006) Expression analysis of barley (Hordeum vulgare Hordeum vulgare) during salinity stress. Funct. Integr. Genomics, 6, 143-156.
-
(2006)
Funct. Integr. Genomics
, vol.6
, pp. 143-156
-
-
Walia, H.1
Wilson, C.2
Wahid, A.3
Condamine, P.4
Cui, X.5
Close, T.J.6
-
149
-
-
34247126574
-
Array-based genotyping and expression analysis of barley cv
-
Walia, H., Wilson, C., Condamine, P., Ismail, A.M., Xu, J., Cui, X., and Close, T.J. (2007) Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise. BMC Genomics, 8, 87.
-
(2007)
Maythorpe and Golden Promise. BMC Genomics
, vol.8
, pp. 87
-
-
Walia, H.1
Wilson, C.2
Condamine, P.3
Ismail, A.M.4
Xu, J.5
Cui, X.6
Close, T.J.7
-
150
-
-
29144527032
-
Improving salt tolerance of wheat and barley: future prospects
-
Colmer, T.D., Munns, R., and Flowers, T.J. (2005) Improving salt tolerance of wheat and barley: future prospects. Aust. J. Exp. Agr., 45, 1425-1443.
-
(2005)
Aust. J. Exp. Agr
, vol.45
, pp. 1425-1443
-
-
Colmer, T.D.1
Munns, R.2
Flowers, T.J.3
-
151
-
-
33645558534
-
Comparative transcriptome analyses of barley and rice under salt stress
-
Ueda, A., Kathiresan, A., Bennett, J., and Takabe, T. (2006) Comparative transcriptome analyses of barley and rice under salt stress. Theor. Appl. Genet., 112, 1286-1294.
-
(2006)
Theor. Appl. Genet
, vol.112
, pp. 1286-1294
-
-
Ueda, A.1
Kathiresan, A.2
Bennett, J.3
Takabe, T.4
-
152
-
-
70349575391
-
Comparing genomic expression patterns across plant species reveals highly diverged transcriptional dynamics in response to salt stress
-
Walia, H., Wilson, C., Ismail, A.M., Close, T.J., and Cui, X. (2009) Comparing genomic expression patterns across plant species reveals highly diverged transcriptional dynamics in response to salt stress. BMC Genomics, 10, 398.
-
(2009)
BMC Genomics
, vol.10
, pp. 398
-
-
Walia, H.1
Wilson, C.2
Ismail, A.M.3
Close, T.J.4
Cui, X.5
-
153
-
-
4244168125
-
Altered nitrogen metabolism under environmental stress conditions, in Handbook of Plant and Crop Stress, 2nd edn
-
(ed. M. Pessarakli), Marcel Dekker Inc., New York
-
Rabie, E. (1999) Altered nitrogen metabolism under environmental stress conditions, in Handbook of Plant and Crop Stress, 2nd edn (ed. M. Pessarakli), Marcel Dekker Inc., New York, pp. 349-363.
-
(1999)
, pp. 349-363
-
-
Rabie, E.1
-
154
-
-
0033831570
-
Genomic analysis of a nutrient response in Arabidopsis reveals diverse expression patterns and novel metabolic and potential regulatory genes induced by nitrate
-
Wang, R., Guegler, K., LaBrie, S.T., and Crawforda, N.M. (2000) Genomic analysis of a nutrient response in Arabidopsis reveals diverse expression patterns and novel metabolic and potential regulatory genes induced by nitrate. Plant Cell, 12, 1491-1509.
-
(2000)
Plant Cell
, vol.12
, pp. 1491-1509
-
-
Wang, R.1
Guegler, K.2
LaBrie, S.T.3
Crawforda, N.M.4
-
155
-
-
0034817855
-
Nitrate-induced genes in tomato roots
-
Wang, Y.H., Garvin, D.F., and Kochian, L.V. (2001) Nitrate-induced genes in tomato roots. Array analysis reveals novel genes that may play a role in nitrogen nutrition. Plant Physiol., 127 (1), 345-359.
-
(2001)
Array analysis reveals novel genes that may play a role in nitrogen nutrition. Plant Physiol
, vol.127
, Issue.1
, pp. 345-359
-
-
Wang, Y.H.1
Garvin, D.F.2
Kochian, L.V.3
-
156
-
-
70350323687
-
Influence of nitrogen on the expression of TaDof1 transcription factor in wheat and its relationship with photosynthetic and ammonium assimilating efficiency
-
Kumar, R., Taware, R., Gaur, V.S., Guru, S.K., and Kumar, A. (2009) Influence of nitrogen on the expression of TaDof1 transcription factor in wheat and its relationship with photosynthetic and ammonium assimilating efficiency. Mol. Biol. Rep., 36 (8), 2209-2220.
-
(2009)
Mol. Biol. Rep
, vol.36
, Issue.8
, pp. 2209-2220
-
-
Kumar, R.1
Taware, R.2
Gaur, V.S.3
Guru, S.K.4
Kumar, A.5
-
157
-
-
0030579205
-
Molecular cloning of higher plant homologues of the high-affinity nitrate transporters of Chlamydomonas reinhardtii and Aspergillus nidulans
-
Trueman, L.J., Richardson, A., and Forde, B.G. (1996) Molecular cloning of higher plant homologues of the high-affinity nitrate transporters of Chlamydomonas reinhardtii and Aspergillus nidulans. Gene, 175, 223-231.
-
(1996)
Gene
, vol.175
, pp. 223-231
-
-
Trueman, L.J.1
Richardson, A.2
Forde, B.G.3
-
158
-
-
0033765356
-
Isolation and characterization of HvNRT2.3 and HvNRT2.4, cDNAs encoding high-affinity nitrate transporters from roots of barley
-
Vidmar, J.J., Zhuo, D., Siddiqi, M.Y., and Glass, A.D.M. (2000) Isolation and characterization of HvNRT2.3 and HvNRT2.4, cDNAs encoding high-affinity nitrate transporters from roots of barley. Plant Physiol., 122, 783-792.
-
(2000)
Plant Physiol
, vol.122
, pp. 783-792
-
-
Vidmar, J.J.1
Zhuo, D.2
Siddiqi, M.Y.3
Glass, A.D.M.4
-
159
-
-
0033789831
-
Fructan accumulation induced by nitrogen deficiency in barley leaves correlates with the level ofsucrose: fructan 6-fructosyltransferase mRNA
-
Wang, C., van den Ende, W., and Tillberg, J.E. (2000) Fructan accumulation induced by nitrogen deficiency in barley leaves correlates with the level ofsucrose: fructan 6-fructosyltransferase mRNA. Planta, 211 (5), 701-707.
-
(2000)
Planta
, vol.211
, Issue.5
, pp. 701-707
-
-
Wang, C.1
Ende, V.D.W.2
Tillberg, J.E.3
-
160
-
-
33845547967
-
Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus
-
Morcuende, R., Bari, R., Gibon, Y., Zheng, W.M., Pant, B.D., Blasing, O., Usadel, B., Czechowski, T., Udvardi, M.K., Stitt, M., and Scheible, W.R. (2007) Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus. Plant Cell Environ., 30, 85-112.
-
(2007)
Plant Cell Environ
, vol.30
, pp. 85-112
-
-
Morcuende, R.1
Bari, R.2
Gibon, Y.3
Zheng, W.M.4
Pant, B.D.5
Blasing, O.6
Usadel, B.7
Czechowski, T.8
Udvardi, M.K.9
Stitt, M.10
Scheible, W.R.11
-
161
-
-
0141796610
-
Transcriptomic analysis of metabolic changes by phosphorus stress in rice plant roots
-
Wasaki, J., Yonetani, R., Kuroda, S., Shinano, T., Yazaki, J., Fujii, F., Shimbo, K., Yamamoto, K., Sakata, K., Sasaki, T., Kishimoto, N., Kikuchi, S., Yamagishi, M., and Osaki, M. (2003) Transcriptomic analysis of metabolic changes by phosphorus stress in rice plant roots. Plant Cell Environ., 26, 1515-1523.
-
(2003)
Plant Cell Environ
, vol.26
, pp. 1515-1523
-
-
Wasaki, J.1
Yonetani, R.2
Kuroda, S.3
Shinano, T.4
Yazaki, J.5
Fujii, F.6
Shimbo, K.7
Yamamoto, K.8
Sakata, K.9
Sasaki, T.10
Kishimoto, N.11
Kikuchi, S.12
Yamagishi, M.13
Osaki, M.14
-
162
-
-
0037355477
-
Nylon filter arrays reveal differential gene expression in proteoid roots of white lupin in response to phosphorus deficiency
-
Uhde-Stone, C., Zinn, K.E., Ramirez-Yanez, M., Li, A.G., Vance, C.P., and Allan, D.L. (2003) Nylon filter arrays reveal differential gene expression in proteoid roots of white lupin in response to phosphorus deficiency. Plant Physiol., 131, 1064-1079.
-
(2003)
Plant Physiol
, vol.131
, pp. 1064-1079
-
-
Uhde-stone, C.1
Zinn, K.E.2
Ramirez-yanez, M.3
Li, A.G.4
Vance, C.P.5
Allan, D.L.6
-
163
-
-
34548048392
-
An aluminium-activated citrate transporter in barley
-
Furukawa, J., Yamaji, N., Wang, H., Mitani, N., Murata, Y., Sato, K., Katsuhara, M., Takeda, K., and Ma, J.F. (2007) An aluminium-activated citrate transporter in barley. Plant Cell Physiol., 38 (8), 1081-1091.
-
(2007)
Plant Cell Physiol
, vol.38
, Issue.8
, pp. 1081-1091
-
-
Furukawa, J.1
Yamaji, N.2
Wang, H.3
Mitani, N.4
Murata, Y.5
Sato, K.6
Katsuhara, M.7
Takeda, K.8
Ma, J.F.9
-
164
-
-
84885700147
-
-
8 February
-
http://www.plexdb.org/modules/PD_browse/experiment_browser.php?experiment=BB83&genechip=Barley1 (8 February 2011) .
-
(2011)
-
-
-
165
-
-
36749007180
-
Boron-toxicity tolerance in barley arising from efflux transporter amplification
-
Sutton, T., Baumann, U., Hyes, J., Collins, N.C., Shi, B.J., Schnurbusch, T., Hay, A., Mayo, G., Pallotta, M., Tester, M., and Langridge, P. (2007) Boron-toxicity tolerance in barley arising from efflux transporter amplification. Science, 318, 1446-1449.
-
(2007)
Science
, vol.318
, pp. 1446-1449
-
-
Sutton, T.1
Baumann, U.2
Hyes, J.3
Collins, N.C.4
Shi, B.J.5
Schnurbusch, T.6
Hay, A.7
Mayo, G.8
Pallotta, M.9
Tester, M.10
Langridge, P.11
-
166
-
-
70350776582
-
Microarray analysis of late response to boron toxicity in barley (Hordeum vulgare Hordeum vulgare) leaves
-
Oz, M.T., Yilmaz, R., Eyidogan, F., de Graaff, L., Yucel, M., and Oktemi, H.A. (2009) Microarray analysis of late response to boron toxicity in barley (Hordeum vulgare Hordeum vulgare) leaves. Turkish J. Agric. Forest., 33, 191-202.
-
(2009)
Turkish J. Agric. Forest
, vol.33
, pp. 191-202
-
-
Oz, M.T.1
Yilmaz, R.2
Eyidogan, F.3
Graaff, D.L.4
Yucel, M.5
Oktemi, H.A.6
-
167
-
-
33748614089
-
Biosynthesis and secretion of mugineic acid family phytosiderophores in zinc-deficient barley
-
Suzuki, M., Takahashi, M., Tsukamoto, T., Watanabe, S., Matsuhashi, S., Yazaki, J., Kishimoto, N., Kikuchi, S., Nakanishi, H., Mori, S., and Nishizawa, N.K. (2006) Biosynthesis and secretion of mugineic acid family phytosiderophores in zinc-deficient barley. Plant J., 48, 85-97.
-
(2006)
Plant J
, vol.48
, pp. 85-97
-
-
Suzuki, M.1
Takahashi, M.2
Tsukamoto, T.3
Watanabe, S.4
Matsuhashi, S.5
Yazaki, J.6
Kishimoto, N.7
Kikuchi, S.8
Nakanishi, H.9
Mori, S.10
Nishizawa, N.K.11
-
168
-
-
0030444055
-
Defining selection criteria to improve yield under drought
-
Richards, R.A. (1996) Defining selection criteria to improve yield under drought. Plant Growth Regul., 20 (2), 157-166.
-
(1996)
Plant Growth Regul
, vol.20
, Issue.2
, pp. 157-166
-
-
Richards, R.A.1
-
169
-
-
0024508964
-
Mapping mendelian factors underlying quantitative traits using RFLP linkage maps
-
Lander, E.S. and Botstein, D. (1989) Mapping mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics, 121, 185-199.
-
(1989)
Genetics
, vol.121
, pp. 185-199
-
-
Lander, E.S.1
Botstein, D.2
-
170
-
-
0027247860
-
Interval mapping of multiple quantitative trait loci
-
Jansen, R.C. (1993) Interval mapping of multiple quantitative trait loci. Genetics, 135, 205-211.
-
(1993)
Genetics
, vol.135
, pp. 205-211
-
-
Jansen, R.C.1
-
171
-
-
0028224156
-
Precision mapping of quantitative trait loci
-
Zeng, Z.B. (1994) Precision mapping of quantitative trait loci. Genetics, 136, 1457-1468.
-
(1994)
Genetics
, vol.136
, pp. 1457-1468
-
-
Zeng, Z.B.1
-
172
-
-
5144221069
-
Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars
-
Kraakman, A.T.W., Niks, R.E., van den Berg, P.M.M.M., Stam, P., and van Eeuwijk, F.A. (2004) Linkage disequilibrium mapping of yield and yield stability in modern spring barley cultivars. Genetics, 168, 435-446.
-
(2004)
Genetics
, vol.168
, pp. 435-446
-
-
Kraakman, A.T.W.1
Niks, R.E.2
Berg, V.D.P.M.M.M.3
Stam, P.4
Eeuwijk, V.F.A.5
-
173
-
-
62349106485
-
Defining gene and QTL networks
-
Jansen, R.C., Tesson, B.M., Fu, J., Yang, Y., and McIntyre, L.M. (2009) Defining gene and QTL networks. Curr. Opin. Plant Biol., 12, 241-246.
-
(2009)
Curr. Opin. Plant Biol
, vol.12
, pp. 241-246
-
-
Jansen, R.C.1
Tesson, B.M.2
Fu, J.3
Yang, Y.4
McIntyre, L.M.5
-
174
-
-
0037246061
-
GrainGenes: the genome database for small-grain crops
-
Matthews, D.E., Carollo, V.L., Lazo, G.R., and Anderson, O.D. (2003) GrainGenes: the genome database for small-grain crops. Nucleic Acids Res., 31, 183-186.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 183-186
-
-
Matthews, D.E.1
Carollo, V.L.2
Lazo, G.R.3
Anderson, O.D.4
-
175
-
-
33644874404
-
Gramene: a bird's eye view of cereal genomes
-
(Database Issue)
-
Jaiswal, P., Ni, J., Yap, I., Ware, D., Spooner, W., Youens-Clark, K., Ren, L., Liang, C., Zhao, W., Ratnapu, K., Faga, B., Canaran, P., Fogleman, M., Hebbard, C., Avraham, S., Schmidt, S., Casstevens, T.M., Buckler, E.S., Stein, L., and McCouch, S. (2006) Gramene: a bird's eye view of cereal genomes. Nucleic Acids Res., 34 (Database Issue), D717-D723.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Jaiswal, P.1
Ni, J.2
Yap, I.3
Ware, D.4
Spooner, W.5
Youens-clark, K.6
Ren, L.7
Liang, C.8
Zhao, W.9
Ratnapu, K.10
Faga, B.11
Canaran, P.12
Fogleman, M.13
Hebbard, C.14
Avraham, S.15
Schmidt, S.16
Casstevens, T.M.17
Buckler, E.S.18
Stein, L.19
McCouch, S.20
more..
-
176
-
-
79954516114
-
A genotypic and phenotypic information source for marker-assisted selection of cereals: the CEREALAB Database
-
doi: 10.1093/database/baq038
-
Milc, J., Sala, A., Bergamaschi, S., and Pecchioni, N. (2011) A genotypic and phenotypic information source for marker-assisted selection of cereals: the CEREALAB Database. Database. doi: 10.1093/database/baq038
-
(2011)
Database
-
-
Milc, J.1
Sala, A.2
Bergamaschi, S.3
Pecchioni, N.4
-
177
-
-
0002100348
-
Primary, secondary and meta-analysis of research
-
Glass, G.V. (1976) Primary, secondary and meta-analysis of research. Educ. Res., 5, 3-8.
-
(1976)
Educ. Res
, vol.5
, pp. 3-8
-
-
Glass, G.V.1
-
178
-
-
0034101307
-
Quantitative trait loci: a meta-analysis
-
Goffinet, B. and Gerber, S. (2000) Quantitative trait loci: a meta-analysis. Genetics, 155, 463-473.
-
(2000)
Genetics
, vol.155
, pp. 463-473
-
-
Goffinet, B.1
Gerber, S.2
-
179
-
-
67650400640
-
Improved resolution in the position of drought-related QTLs in a single mapping population of rice by meta-analysis
-
Khowaja, F.S., Norton, G.J., Courtois, B., and Price, A.H. (2009) Improved resolution in the position of drought-related QTLs in a single mapping population of rice by meta-analysis. BMC Genomics, 10, 276.
-
(2009)
BMC Genomics
, vol.10
, pp. 276
-
-
Khowaja, F.S.1
Norton, G.J.2
Courtois, B.3
Price, A.H.4
-
180
-
-
0036010780
-
Chromosome regions and stress-related sequences involved in resistance to abiotic stress in Triticeae
-
Cattivelli, L., Baldi, P., Crosatti, C., Di Fonzo, N., Faccioli, P., Grossi, M., Mastrangelo, A.M., Pecchioni, N., and Stanca, A.M. (2002) Chromosome regions and stress-related sequences involved in resistance to abiotic stress in Triticeae. Plant Mol. Biol., 48 (5-6), 649-665.
-
(2002)
Plant Mol. Biol
, vol.48
, Issue.5
, pp. 649-665
-
-
Cattivelli, L.1
Baldi, P.2
Crosatti, C.3
Fonzo, D.N.4
Faccioli, P.5
Grossi, M.6
Mastrangelo, A.M.7
Pecchioni, N.8
Stanca, A.M.9
-
181
-
-
0142113840
-
An integrated map of the barley genome
-
in The DNA-Based Markers in Plants, 2nd edn (eds R.L. Phillips and I.K. Vasil), Kluwer Academic Publishers, Dordrecht
-
Kleinhofs, A. and Graner, A. (2001) An integrated map of the barley genome, in The DNA-Based Markers in Plants, 2nd edn (eds R.L. Phillips and I.K. Vasil), Kluwer Academic Publishers, Dordrecht, pp. 187-199.
-
(2001)
, pp. 187-199
-
-
Kleinhofs, A.1
Graner, A.2
-
182
-
-
0346505481
-
Overexpression of the rice Osmyb4 gene increases chilling and freezing tolerance of Arabidopsis thaliana plants
-
Vannini, C., Locatelli, F., Bracale, M., Magnani, E., Marsoni, M., Osnato, M., Mattana, M., Baldoni, E., and Coraggio, I. (2004) Overexpression of the rice Osmyb4 gene increases chilling and freezing tolerance of Arabidopsis thaliana plants. Plant J., 37 (1), 115-127.
-
(2004)
Plant J
, vol.37
, Issue.1
, pp. 115-127
-
-
Vannini, C.1
Locatelli, F.2
Bracale, M.3
Magnani, E.4
Marsoni, M.5
Osnato, M.6
Mattana, M.7
Baldoni, E.8
Coraggio, I.9
-
183
-
-
0037256706
-
The transcription factors HvAB15 and HvVP1 are required for the abscisic acid induction of gene expression in barley aleurone cells
-
Casaretto, J. and Ho, T.D. (2003) The transcription factors HvAB15 and HvVP1 are required for the abscisic acid induction of gene expression in barley aleurone cells. Plant Cell, 15 (1), 271-284.
-
(2003)
Plant Cell
, vol.15
, Issue.1
, pp. 271-284
-
-
Casaretto, J.1
Ho, T.D.2
-
184
-
-
49749145667
-
Positive role of a wheat HvAB15 ortholog in abiotic stress response of seedlings
-
Kobayashi, F., Maeta, E., Terashima, A., and Takumi, S. (2008) Positive role of a wheat HvAB15 ortholog in abiotic stress response of seedlings. Physiol. Plant., 134, 74-86.
-
(2008)
Physiol. Plant
, vol.134
, pp. 74-86
-
-
Kobayashi, F.1
Maeta, E.2
Terashima, A.3
Takumi, S.4
-
185
-
-
33646382386
-
Believe it or not, QTLs are accurate!
-
Price, A.H. (2006) Believe it or not, QTLs are accurate!. Trends Plant Sci., 11 (5), 213-216.
-
(2006)
Trends Plant Sci
, vol.11
, Issue.5
, pp. 213-216
-
-
Price, A.H.1
-
186
-
-
0029803556
-
Use of the additive main effects and multiplicative interaction model in QTL mapping for adaptation in barley
-
Romagosa, I., Ullrich, S.E., Han, F., and Hayes, P.M. (1996) Use of the additive main effects and multiplicative interaction model in QTL mapping for adaptation in barley. Theor. Appl. Genet., 93 (1-2), 30-37.
-
(1996)
Theor. Appl. Genet
, vol.93
, Issue.1
, pp. 30-37
-
-
Romagosa, I.1
Ullrich, S.E.2
Han, F.3
Hayes, P.M.4
-
187
-
-
34249023066
-
Genomewide analysis of epistatic effects for quantitative traits in barley
-
Xu, S. and Jia, Z. (2007) Genomewide analysis of epistatic effects for quantitative traits in barley. Genetics, 175, 1955-1963.
-
(2007)
Genetics
, vol.175
, pp. 1955-1963
-
-
Xu, S.1
Jia, Z.2
-
188
-
-
42149190621
-
Mapping adaptation of barley to droughted environments
-
Comadran, J., Russell, J.R., van Eeuwijk, F.A., Ceccarelli, S., Grando, S., Baum, M., Stanca, A.M., Pecchioni, N., Mastrangelo, A.M., Akar, T., Al-Yassin, A., Benbelkacem, A., Choumane, W., Ouabbou, H., Dahan, R., Bort, J., Araus, J.-L., Pswarayi, A., Romagosa, I., Hackett, C.A., and Thomas, W.T.B. (2008) Mapping adaptation of barley to droughted environments. Euphytica, 161 35-45.
-
(2008)
Euphytica
, vol.161
, pp. 35-45
-
-
Comadran, J.1
Russell, J.R.2
Eeuwijk, V.F.A.3
Ceccarelli, S.4
Grando, S.5
Baum, M.6
Stanca, A.M.7
Pecchioni, N.8
Mastrangelo, A.M.9
Akar, T.10
Al-yassin, A.11
Benbelkacem, A.12
Choumane, W.13
Ouabbou, H.14
Dahan, R.15
Bort, J.16
Araus, J.-L.17
Pswarayi, A.18
Romagosa, I.19
Hackett, C.A.20
Thomas, W.T.B.21
more..
-
189
-
-
1542378758
-
Two loci on chromosome 5H determine low-temperature tolerance in a "Nure" (winter) x "Tremois" (spring) barley map
-
Francia, E., Rizza, F., Cattivelli, L., Stanca, A.M., Galiba, G., Toth, B., Hayes, P.M., Skinner, J.S., and Pecchioni, N. (2004) Two loci on chromosome 5H determine low-temperature tolerance in a "Nure" (winter) x "Tremois" (spring) barley map. Theor. Appl. Genet., 108, 670-680.
-
(2004)
Theor. Appl. Genet
, vol.108
, pp. 670-680
-
-
Francia, E.1
Rizza, F.2
Cattivelli, L.3
Stanca, A.M.4
Galiba, G.5
Toth, B.6
Hayes, P.M.7
Skinner, J.S.8
Pecchioni, N.9
-
190
-
-
0035400051
-
Genetical genomics: the added value from segregation
-
Jansen, R.C. and Nap, J.P. (2001) Genetical genomics: the added value from segregation. Trends Genet., 17 (7), 388-391.
-
(2001)
Trends Genet
, vol.17
, Issue.7
, pp. 388-391
-
-
Jansen, R.C.1
Nap, J.P.2
-
191
-
-
20644454887
-
Genetical genomics in humans and model organisms
-
de Koning, D.J. and Haley, C.S. (2005) Genetical genomics in humans and model organisms. Trends Genet., 21 (7), 377-381.
-
(2005)
Trends Genet
, vol.21
, Issue.7
, pp. 377-381
-
-
Koning, D.D.J.1
Haley, C.S.2
-
192
-
-
33744810323
-
High-density haplotying with microarray-based expression and single feature polymorphism markers in Arabidopsis
-
West, M.A.L., Leeuwen, H., Kozik, A., Kliebenstein, D.K., Doerge, R.W., Clair, D.A., and Michelmore, R.W. (2006) High-density haplotying with microarray-based expression and single feature polymorphism markers in Arabidopsis. Genome Res., 16, 787-795.
-
(2006)
Genome Res
, vol.16
, pp. 787-795
-
-
West, M.A.L.1
Leeuwen, H.2
Kozik, A.3
Kliebenstein, D.K.4
Doerge, R.W.5
Clair, D.A.6
Michelmore, R.W.7
-
193
-
-
77956841911
-
A global analysis of QTLs for expression variations in rice shoots at the early seedling stage
-
Wang, J., Yu, H., Xie, W., Xing, Y., Yu, S., Xu, C., Li, X., Xiao, J., and Zhang, Q. (2010) A global analysis of QTLs for expression variations in rice shoots at the early seedling stage. Plant J., 63, 1063-1074.
-
(2010)
Plant J
, vol.63
, pp. 1063-1074
-
-
Wang, J.1
Yu, H.2
Xie, W.3
Xing, Y.4
Yu, S.5
Xu, C.6
Li, X.7
Xiao, J.8
Zhang, Q.9
-
194
-
-
77649130219
-
AneQTL analysis of partial resistance to Puccinia hordei in barley
-
Chen, X., Hackett, C.A., Niks, R.E., Hedley, P.E., Booth, C., Druka, A., Marcel, T.C., Vels, A., Bayer, M., Milne, I., Morris, J., Ramsay, L., Marshall, D., Cardle, L., and Waugh, R. (2010) AneQTL analysis of partial resistance to Puccinia hordei in barley. PLoS ONE, 5 (1), e8598.
-
(2010)
PLoS ONE
, vol.5
, Issue.1
-
-
Chen, X.1
Hackett, C.A.2
Niks, R.E.3
Hedley, P.E.4
Booth, C.5
Druka, A.6
Marcel, T.C.7
Vels, A.8
Bayer, M.9
Milne, I.10
Morris, J.11
Ramsay, L.12
Marshall, D.13
Cardle, L.14
Waugh, R.15
-
195
-
-
84858781326
-
Expression quantitative trait loci mapping heat tolerance during reproductive development in wheat (Triticum aestivum), in Wheat Production in Stressed Environments
-
(eds H.T. Buck, J.E. Nisi, and N. Salomón), Springer, Amsterdam
-
Hays, D., Mason, E., Hwa Do, J., Menz, M., and Reynolds, M. (2007) Expression quantitative trait loci mapping heat tolerance during reproductive development in wheat (Triticum aestivum), in Wheat Production in Stressed Environments (eds H.T. Buck, J.E. Nisi, and N. Salomón), Springer, Amsterdam, pp. 373-382.
-
(2007)
, pp. 373-382
-
-
Hays, D.1
Mason, E.2
Do, H.J.3
Menz, M.4
Reynolds, M.5
-
196
-
-
84885792803
-
Integration of array-based markers and expression QTL with genetic maps in wheat
-
Jan. 15-19, 2011, San Diego, CA.
-
Jordan, M.C. and Banks, T.W. (2011) Integration of array-based markers and expression QTL with genetic maps in wheat. P274. Plant and Animal Genomes XIX Conference, Jan. 15-19, 2011, San Diego, CA.
-
(2011)
P274. Plant and Animal Genomes XIX Conference
-
-
Jordan, M.C.1
Banks, T.W.2
-
197
-
-
79952103186
-
Mapping of quantitative trait loci associated with protein expression variation in barley grains
-
doi: 10.1007/s11032-010-9432-2
-
Witzel, K., Pietsch, C., Strickert, M., Matros, A., Röder, M.S., Weschke, W., Wobus, U., and Mock, H. (2010) Mapping of quantitative trait loci associated with protein expression variation in barley grains. Mol. Breed. doi: 10.1007/s11032-010-9432-2
-
(2010)
Mol. Breed
-
-
Witzel, K.1
Pietsch, C.2
Strickert, M.3
Matros, A.4
Röder, M.S.5
Weschke, W.6
Wobus, U.7
Mock, H.8
-
198
-
-
34248377833
-
The metabolic signature related to high plant growth rate in Arabidopsis thaliana
-
Meyer, R.C., Steinfath, M., Lisec, J., Becher, M., Witucka-Wall, H., Torjèk, H., Fiehn, O., Eckardt, A., Willmitzer, L., Selbig, J., and Altmann, T. (2007) The metabolic signature related to high plant growth rate in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA, 104, 4759-4764.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 4759-4764
-
-
Meyer, R.C.1
Steinfath, M.2
Lisec, J.3
Becher, M.4
Witucka-wall, H.5
Torjèk, H.6
Fiehn, O.7
Eckardt, A.8
Willmitzer, L.9
Selbig, J.10
Altmann, T.11
-
199
-
-
54149090305
-
Biochemical networks and epistasis shape the Arabidopsis thaliana metabolome
-
Rowe, H.C., Hansen, B.G., Halkier, B.A., and Kliebenstein, D.J. (2008) Biochemical networks and epistasis shape the Arabidopsis thaliana metabolome. Plant Cell, 20, 1199-1216.
-
(2008)
Plant Cell
, vol.20
, pp. 1199-1216
-
-
Rowe, H.C.1
Hansen, B.G.2
Halkier, B.A.3
Kliebenstein, D.J.4
-
200
-
-
34249055193
-
Global eQTL mapping reveals the complex genetic architecture of transcript level variation in Arabidopsis
-
West, M.A.L., Kim, K., Kliebenstein, D.J., van Leeuwen, H., Michelmore, R.W., Doerge, R.W., and St Clair, D.A. (2007) Global eQTL mapping reveals the complex genetic architecture of transcript level variation in Arabidopsis. Genetics, 175, 1441-1450.
-
(2007)
Genetics
, vol.175
, pp. 1441-1450
-
-
West, M.A.L.1
Kim, K.2
Kliebenstein, D.J.3
Leeuwen, V.H.4
Michelmore, R.W.5
Doerge, R.W.6
Clair, S.D.A.7
-
201
-
-
42949113636
-
The effects of cold acclimation on photosynthetic apparatus and the expression of COR14b in four genotypes of barley (Hordeum vulgare) contrasting in their tolerance to freezing and high-light treatment in cold conditions
-
Rapacz, M., Wolanin, B., Hura, K., and Tyrka, M. (2008) The effects of cold acclimation on photosynthetic apparatus and the expression of COR14b in four genotypes of barley (Hordeum vulgare) contrasting in their tolerance to freezing and high-light treatment in cold conditions. Ann. Bot., 101, 689-699.
-
(2008)
Ann. Bot
, vol.101
, pp. 689-699
-
-
Rapacz, M.1
Wolanin, B.2
Hura, K.3
Tyrka, M.4
-
202
-
-
63849174963
-
Cbf genes of the Fr-A2 allele are differentially regulated between long-term cold acclimated crown tissue of freeze-resistant and susceptible, winter wheat mutant lines
-
Sutton, F., Chen, D.G., Ge, X., and Kenefick, D. (2009) Cbf genes of the Fr-A2 allele are differentially regulated between long-term cold acclimated crown tissue of freeze-resistant and susceptible, winter wheat mutant lines. BMC Plant Biol., 9, 34.
-
(2009)
BMC Plant Biol
, vol.9
, pp. 34
-
-
Sutton, F.1
Chen, D.G.2
Ge, X.3
Kenefick, D.4
-
203
-
-
0027225478
-
Quantitative trait loci on barley (Hordeum vulgare Hordeum vulgare) chromosome 7 associated with components of winter hardiness
-
Hayes, P.M., Blake, T., Chen, T.H.H., Tragoonrung, S., Chen, F., Pan, A., and Liu, B. (1993) Quantitative trait loci on barley (Hordeum vulgare Hordeum vulgare) chromosome 7 associated with components of winter hardiness. Genome, 36, 66-71.
-
(1993)
Genome
, vol.36
, pp. 66-71
-
-
Hayes, P.M.1
Blake, T.2
Chen, T.H.H.3
Tragoonrung, S.4
Chen, F.5
Pan, A.6
Liu, B.7
-
204
-
-
0028317307
-
Genetic analysis of the components of winter hardiness in barley (Hordeum vulgare Hordeum vulgare)
-
Pan, A., Hayes, P.M., Chen, F., Blake, T., Wright, S., Karsai, I., and Bedo, Z. (1994) Genetic analysis of the components of winter hardiness in barley (Hordeum vulgare Hordeum vulgare). Theor. Appl. Genet., 89, 900-910.
-
(1994)
Theor. Appl. Genet
, vol.89
, pp. 900-910
-
-
Pan, A.1
Hayes, P.M.2
Chen, F.3
Blake, T.4
Wright, S.5
Karsai, I.6
Bedo, Z.7
-
205
-
-
34249753121
-
RFLP mapping of the vernalization (Vrn1) and frost resistance (Fr1) genes on chromosome 5 A of wheat
-
Galiba, G., Quarrie, S.A., Sutka, J., Morgounov, A., and Snape, J.W. (1995) RFLP mapping of the vernalization (Vrn1) and frost resistance (Fr1) genes on chromosome 5 A of wheat. Theor. Appl. Genet, 90 (7-8), 1174-1179.
-
(1995)
Theor. Appl. Genet
, vol.90
, Issue.7
, pp. 1174-1179
-
-
Galiba, G.1
Quarrie, S.A.2
Sutka, J.3
Morgounov, A.4
Snape, J.W.5
-
206
-
-
0038216562
-
The cold-regulated transcriptional activator Cbf3 is linked to the frost-tolerance locus Fr-A2 on wheat chromosome 5A
-
Vágújfalvi, A., Galiba, G., Cattivelli, L., and Dubcovsky, J. (2003) The cold-regulated transcriptional activator Cbf3 is linked to the frost-tolerance locus Fr-A2 on wheat chromosome 5A. Mol. Genet. Genomics, 269 (1), 60-67.
-
(2003)
Mol. Genet. Genomics
, vol.269
, Issue.1
, pp. 60-67
-
-
Vágújfalvi, A.1
Galiba, G.2
Cattivelli, L.3
Dubcovsky, J.4
-
207
-
-
34547420999
-
Localization of QTLs and candidate genes involved in the regulation of frost resistance in cereals
-
Bologna
-
Galiba, G., Pecchioni, N., Vágújfalvi, A., Francia, E., Toth, B., Barabaschi, D., Barilli, S., Crosatti, C., Cattivelli, L., and Stanca, A.M. (2005) Localization of QTLs and candidate genes involved in the regulation of frost resistance in cereals. Proceedings of the International Congress "In the Wake of the Double Helix: From the Green Revolution to the Gene Revolution," 27-31 May 2003, Bologna, pp. 253-266.
-
(2005)
Proceedings of the International Congress "In the Wake of the Double Helix: From the Green Revolution to the Gene Revolution," 27-31 May 2003
, pp. 253-266
-
-
Galiba, G.1
Pecchioni, N.2
Vágújfalvi, A.3
Francia, E.4
Toth, B.5
Barabaschi, D.6
Barilli, S.7
Crosatti, C.8
Cattivelli, L.9
Stanca, A.M.10
-
208
-
-
33644746536
-
Mapping of barley homologs to genes that regulate low temperature tolerance in Arabidopsis
-
Skinner, J., Szucs, P., von Zitzewitz, J., Marquez-Cedillo, L., Filichkin, T., Stockinger, E.J., Thomashow, M.F., Chen, T.H.H., and Hayes, P.M. (2006) Mapping of barley homologs to genes that regulate low temperature tolerance in Arabidopsis. Theor. Appl. Genet., 112, 832-842.
-
(2006)
Theor. Appl. Genet
, vol.112
, pp. 832-842
-
-
Skinner, J.1
Szucs, P.2
Zitzewitz, V.J.3
Marquez-cedillo, L.4
Filichkin, T.5
Stockinger, E.J.6
Thomashow, M.F.7
Chen, T.H.H.8
Hayes, P.M.9
-
209
-
-
35748985848
-
Fine mapping of a HvCBF gene cluster at the frost resistance locus Fr-H2 in barley
-
Francia, E., Barabaschi, D., Tondelli, A., Laido, G., Rizza, F., Stanca, A.M., Busconi, M., Fogher, C., Stockinger, E.J., and Pecchioni, N. (2007) Fine mapping of a HvCBF gene cluster at the frost resistance locus Fr-H2 in barley. Theor. Appl. Genet., 115, 1083-1091.
-
(2007)
Theor. Appl. Genet
, vol.115
, pp. 1083-1091
-
-
Francia, E.1
Barabaschi, D.2
Tondelli, A.3
Laido, G.4
Rizza, F.5
Stanca, A.M.6
Busconi, M.7
Fogher, C.8
Stockinger, E.J.9
Pecchioni, N.10
-
210
-
-
77955502865
-
CBF gene copy number variation at Frost Resistance-2 is associated with levels of freezing tolerance in temperate-climate cereals
-
Knox, A.K., Dhillon, T., Cheng, H., Tondelli, A., Pecchioni, N., and Stockinger, E.J. (2010) CBF gene copy number variation at Frost Resistance-2 is associated with levels of freezing tolerance in temperate-climate cereals. Theor. Appl. Genet., 121, 21-35.
-
(2010)
Theor. Appl. Genet
, vol.121
, pp. 21-35
-
-
Knox, A.K.1
Dhillon, T.2
Cheng, H.3
Tondelli, A.4
Pecchioni, N.5
Stockinger, E.J.6
-
211
-
-
0035423770
-
FIERY1 encoding an inositol polyphosphate 1-phosphatase is a negative regulator of abscisic acid and stress signaling in Arabidopsis
-
Xiong, L., Lee, H., Ishitani, M., Lee, H., Zhang, C., and Zhu, J.K. (2001) FIERY1 encoding an inositol polyphosphate 1-phosphatase is a negative regulator of abscisic acid and stress signaling in Arabidopsis. Gene Dev., 15, 1971-1984.
-
(2001)
Gene Dev
, vol.15
, pp. 1971-1984
-
-
Xiong, L.1
Lee, H.2
Ishitani, M.3
Lee, H.4
Zhang, C.5
Zhu, J.K.6
-
212
-
-
0037447146
-
ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis. Gene Dev
-
Chinnusamy, V., Ohta, M., Kanrar, S., Lee, B., Hong, X., Agarwal, A., and Zhu, J.K. (2003) ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis. Gene Dev., 17, 1043-1054.
-
(2003)
, vol.17
, pp. 1043-1054
-
-
Chinnusamy, V.1
Ohta, M.2
Kanrar, S.3
Lee, B.4
Hong, X.5
Agarwal, A.6
Zhu, J.K.7
-
213
-
-
26844511323
-
Molecular and structural characterization of barley vernalization genes
-
von Zitzewitz, J., Szucs, P., Dubcovsky, J., Yan, L., Francia, E., Pecchioni, N., Casas, A., Chen, T.H.H., Hayes, P.M., and Skinner, J.S. (2005) Molecular and structural characterization of barley vernalization genes. Plant Mol. Biol., 59, 449-467.
-
(2005)
Plant Mol. Biol
, vol.59
, pp. 449-467
-
-
Zitzewitz, V.J.1
Szucs, P.2
Dubcovsky, J.3
Yan, L.4
Francia, E.5
Pecchioni, N.6
Casas, A.7
Chen, T.H.H.8
Hayes, P.M.9
Skinner, J.S.10
-
214
-
-
84890653603
-
The genetic basis of vernalization response in barley
-
, in Advances in Plant Cold Hardiness(ed. T.H.H. Chen), CABI Publishing, Wallingford, Oxfordshire
-
Cooper, L.L.D., von Zitzewitz, J., Skinner, J.S., Szucs, P., Karsai, I., Francia, E., Stanca, A.M., Pecchioni, N., Laurie, D.A., Chen, T.H.H., and Hayes, P.M. (2006) The genetic basis of vernalization response in barley , in Advances in Plant Cold Hardiness(ed. T.H.H. Chen), CABI Publishing, Wallingford, Oxfordshire, pp. 64-75.
-
(2006)
, pp. 64-75
-
-
Cooper, L.L.D.1
Zitzewitz, V.J.2
Skinner, J.S.3
Szucs, P.4
Karsai, I.5
Francia, E.6
Stanca, A.M.7
Pecchioni, N.8
Laurie, D.A.9
Chen, T.H.H.10
Hayes, P.M.11
-
215
-
-
33745386446
-
Low-temperature tolerance and genetic potential in wheat (Triticum aestivum Triticum aestivum): response to photoperiod, vernalization, and plant development
-
Limin, A.E. and Fowler, D.B. (2006) Low-temperature tolerance and genetic potential in wheat (Triticum aestivum Triticum aestivum): response to photoperiod, vernalization, and plant development. Planta, 224, 360-366.
-
(2006)
Planta
, vol.224
, pp. 360-366
-
-
Limin, A.E.1
Fowler, D.B.2
-
216
-
-
55749096565
-
Regulatory genes involved in the determination of frost tolerance in temperate cereals
-
Galiba, G., Vágújfalvi, A., Li, C., Soltesz, A., and Dubcovsky, J. (2009) Regulatory genes involved in the determination of frost tolerance in temperate cereals. Plant Sci., 176, 12-19.
-
(2009)
Plant Sci
, vol.176
, pp. 12-19
-
-
Galiba, G.1
Vágújfalvi, A.2
Li, C.3
Soltesz, A.4
Dubcovsky, J.5
-
217
-
-
34447105038
-
Expression levels of barley Cbf genes at the Frost resistance-H2 locus are dependent upon alleles at Fr-H1 and Fr-H2
-
Stockinger, E.J., Skinner, J.S., Gardner, K.G., Francia, E., and Pecchioni, N. (2007) Expression levels of barley Cbf genes at the Frost resistance-H2 locus are dependent upon alleles at Fr-H1 and Fr-H2. Plant J., 51 (2), 308-321.
-
(2007)
Plant J
, vol.51
, Issue.2
, pp. 308-321
-
-
Stockinger, E.J.1
Skinner, J.S.2
Gardner, K.G.3
Francia, E.4
Pecchioni, N.5
-
218
-
-
77955668801
-
Regulation of freezing tolerance and flowering in temperate cereals: the VRN-1 connection
-
Dhillon, S.P., Pearce, E.J., Stockinger, A., Distelfeld, C., Li, A.K., Knox, I., Vashegyi, A., Vágújfalvi, G., Galiba, J., and Dubcovsky, T. (2010) Regulation of freezing tolerance and flowering in temperate cereals: the VRN-1 connection. Plant Physiol., 153, 1846-1858.
-
(2010)
Plant Physiol
, vol.153
, pp. 1846-1858
-
-
Dhillon, S.P.1
Pearce, E.J.2
Stockinger, A.3
Distelfeld, C.4
Li, A.K.5
Knox, I.6
Vashegyi, A.7
Vágújfalvi, G.8
Galiba, J.9
Dubcovsky, T.10
-
219
-
-
63649137433
-
Flt-2L, a locus in barley controlling flowering time, spike density, and plant height
-
Chen, A., Baumann, U., Fincher, G.B., and Collins, N.C. (2009) Flt-2L, a locus in barley controlling flowering time, spike density, and plant height. Funct. Integr. Genomics, 9 (2), 243-254.
-
(2009)
Funct. Integr. Genomics
, vol.9
, Issue.2
, pp. 243-254
-
-
Chen, A.1
Baumann, U.2
Fincher, G.B.3
Collins, N.C.4
-
220
-
-
42049098645
-
Plant genetics: the blue revolution, drop by drop, gene by gene
-
Pennisi, E. (2008) Plant genetics: the blue revolution, drop by drop, gene by gene. Science, 320 (5873), 171-173.
-
(2008)
Science
, vol.320
, Issue.5873
, pp. 171-173
-
-
Pennisi, E.1
-
221
-
-
80051985274
-
Genomics of tolerance to abiotic stress in the triticecae
-
, in Genetics and Genomics of the Triticeae(eds G.J. Muehlbauer and C. Feuillet), Springer Science + Business Media
-
Maccaferri, M., Sanguineti, M.C., Giuliani, S., and Tuberosa, R. (2009) Genomics of tolerance to abiotic stress in the triticecae , in Genetics and Genomics of the Triticeae(eds G.J. Muehlbauer and C. Feuillet), Springer Science + Business Media, pp. 481-558.
-
(2009)
, pp. 481-558
-
-
Maccaferri, M.1
Sanguineti, M.C.2
Giuliani, S.3
Tuberosa, R.4
-
222
-
-
33846811563
-
Monitoring plant and soil water status: established and novel methods revisited and their relevance to studies of drought tolerance
-
Jones, H.G. (2007) Monitoring plant and soil water status: established and novel methods revisited and their relevance to studies of drought tolerance. J. Exp. Bot., 58, 119-130.
-
(2007)
J. Exp. Bot
, vol.58
, pp. 119-130
-
-
Jones, H.G.1
-
223
-
-
50249139292
-
Barley adaptation and improvement in the Mediterranean basin
-
Pswarayi, A., van Eeuwijk, F.A., Ceccarelli, S., Grando, S., Comadran, J., Russell, J.R., Francia, E., Pecchioni, N., Li Destri, O., Akar, T., Al-Yassin, A., Benbelkacem, A., Choumane, W., Karrou, M., Ouabbou, H., Bort, J., Araus, J.L., Molina-Cano, J.L., Thomas, W.T.B., and Romagosa, I. (2008) Barley adaptation and improvement in the Mediterranean basin. Plant Breed., 127, 554-560.
-
(2008)
Plant Breed
, vol.127
, pp. 554-560
-
-
Pswarayi, A.1
Eeuwijk, V.F.A.2
Ceccarelli, S.3
Grando, S.4
Comadran, J.5
Russell, J.R.6
Francia, E.7
Pecchioni, N.8
Destri, L.O.9
Akar, T.10
Al-yassin, A.11
Benbelkacem, A.12
Choumane, W.13
Karrou, M.14
Ouabbou, H.15
Bort, J.16
Araus, J.L.17
Molina-cano, J.L.18
Thomas, W.T.B.19
Romagosa, I.20
more..
-
224
-
-
31544465463
-
Physiological traits used in the breeding of new cultivars for water-scarce environments
-
Richards, R.A. (2006) Physiological traits used in the breeding of new cultivars for water-scarce environments. Agr. Water Manage., 80 (1-3), 197-211.
-
(2006)
Agr. Water Manage
, vol.80
, Issue.1
, pp. 197-211
-
-
Richards, R.A.1
-
225
-
-
78249258399
-
Determinants of barley grain yield in a wide range of Mediterranean environments
-
Francia, E., Tondelli, A., Rizza, F., Badeckc, F.W., Li Destri Nicosia, O., Akar, T., Grando, S., Al-Yassin, A., Benbelkacem, A., Thomas, W.T.B., van Eeuwijk, F., Romagosa, I., Stanca, A.M., and Pecchioni, N. (2011) Determinants of barley grain yield in a wide range of Mediterranean environments. Field Crops Res., 120 (1), 169-178.
-
(2011)
Field Crops Res
, vol.120
, Issue.1
, pp. 169-178
-
-
Francia, E.1
Tondelli, A.2
Rizza, F.3
Badeckc, F.W.4
Nicosia, L.D.O.5
Akar, T.6
Grando, S.7
Al-yassin, A.8
Benbelkacem, A.9
Thomas, W.T.B.10
Eeuwijk, V.F.11
Romagosa, I.12
Stanca, A.M.13
Pecchioni, N.14
-
226
-
-
11244354217
-
Identification of drought-inducible genes and differentially expressed sequence tags in barley
-
Diab, A.A., Teulat-Merah, B., This, D., Ozturk, N.Z., Benscher, D., and Sorrells, M.E. (2004) Identification of drought-inducible genes and differentially expressed sequence tags in barley. Theor. Appl. Genet., 109 (7), 1417-1425.
-
(2004)
Theor. Appl. Genet
, vol.109
, Issue.7
, pp. 1417-1425
-
-
Diab, A.A.1
Teulat-merah, B.2
This, D.3
Ozturk, N.Z.4
Benscher, D.5
Sorrells, M.E.6
-
227
-
-
0036982818
-
QTL for grain carbon isotope discrimination in field-grown barley
-
Teulat, B., Merah, O., Sirault, X., Borries, C., Waugh, R., and This, D. (2002) QTL for grain carbon isotope discrimination in field-grown barley. Theor. Appl. Genet., 106, 118-126.
-
(2002)
Theor. Appl. Genet
, vol.106
, pp. 118-126
-
-
Teulat, B.1
Merah, O.2
Sirault, X.3
Borries, C.4
Waugh, R.5
This, D.6
-
228
-
-
0038613748
-
Plant biotechnology and breeding: allied for years to come
-
Morandini, P. and Salamini, F. (2003) Plant biotechnology and breeding: allied for years to come. Trends Plant Sci., 8 (2), 70-75.
-
(2003)
Trends Plant Sci
, vol.8
, Issue.2
, pp. 70-75
-
-
Morandini, P.1
Salamini, F.2
-
229
-
-
75849164727
-
Chromosomal regions controlling seedling drought resistance in Israeli wild barley, Hordeum spontaneum C
-
Chen, G., Krugman, T., Fahima, T., Chen, K., Hu, Y., Roder, M., Nevo, E., and Korol, A. (2010) Chromosomal regions controlling seedling drought resistance in Israeli wild barley, Hordeum spontaneum C. Koch. Genet. Resour. Crop. Evol., 57 (1), 85-99.
-
(2010)
Koch. Genet. Resour. Crop. Evol
, vol.57
, Issue.1
, pp. 85-99
-
-
Chen, G.1
Krugman, T.2
Fahima, T.3
Chen, K.4
Hu, Y.5
Roder, M.6
Nevo, E.7
Korol, A.8
-
230
-
-
0034934869
-
New QTLs identified for plant water status, water-soluble carbohydrate and osmotic adjustment in a barley population grown in a growth chamber under two water regimes
-
Teulat, B., Borries, C., and This, D. (2001) New QTLs identified for plant water status, water-soluble carbohydrate and osmotic adjustment in a barley population grown in a growth chamber under two water regimes. Theor. Appl. Genet., 103 (1), 161-170.
-
(2001)
Theor. Appl. Genet
, vol.103
, Issue.1
, pp. 161-170
-
-
Teulat, B.1
Borries, C.2
This, D.3
-
231
-
-
0347270413
-
QTL for relative water content in fieldgrown barley and their stability across Mediterranean environments
-
Teulat, B., Zoumarou-Wallis, N., Rotter, B., Ben Salem, M., Bahri, H., and This, D. (2003) QTL for relative water content in fieldgrown barley and their stability across Mediterranean environments. Theor. Appl. Genet., 108 (1), 181-188.
-
(2003)
Theor. Appl. Genet
, vol.108
, Issue.1
, pp. 181-188
-
-
Teulat, B.1
Zoumarou-wallis, N.2
Rotter, B.3
Salem, B.M.4
Bahri, H.5
This, D.6
-
232
-
-
0030964283
-
Mapping quantitative trait loci for salt tolerance at germination and the seedling stage in barley (Hordeum vulgare Hordeum vulgare)
-
Mano, Y. and Takeda, K. (1997) Mapping quantitative trait loci for salt tolerance at germination and the seedling stage in barley (Hordeum vulgare Hordeum vulgare). Euphytica, 94, 263-272.
-
(1997)
Euphytica
, vol.94
, pp. 263-272
-
-
Mano, Y.1
Takeda, K.2
-
233
-
-
0032867502
-
Effect of salinity on salt accumulation and reproductive development in the apical meristem of wheat and barley
-
Munns, R. and Rawson, H.M. (1999) Effect of salinity on salt accumulation and reproductive development in the apical meristem of wheat and barley. Aust. J. Plant Physiol., 26 (5), 459-464.
-
(1999)
Aust. J. Plant Physiol
, vol.26
, Issue.5
, pp. 459-464
-
-
Munns, R.1
Rawson, H.M.2
-
234
-
-
0036011327
-
Phenotype/ genotype associations for yield and salt tolerance in a barley mapping population segregating for two dwarfing genes
-
Ellis, R.P., Forster, B.P., Gordon, D.C., Handley, L.L., Keith, R.P., Lawrence, P., Meyer, R., Powell, W., Robinson, D., Scrimgeour, C.M., Young, G., and Thomas, W.T.B. (2002) Phenotype/ genotype associations for yield and salt tolerance in a barley mapping population segregating for two dwarfing genes. J. Exp. Bot., 53 (371), 1163-1176.
-
(2002)
J. Exp. Bot
, vol.53
, Issue.371
, pp. 1163-1176
-
-
Ellis, R.P.1
Forster, B.P.2
Gordon, D.C.3
Handley, L.L.4
Keith, R.P.5
Lawrence, P.6
Meyer, R.7
Powell, W.8
Robinson, D.9
Scrimgeour, C.M.10
Young, G.11
Thomas, W.T.B.12
-
235
-
-
84966138776
-
Chromosome location of genes controlling tolerance to salt (NaCl) and vigour in Hordeum vulgare and H
-
Forster, B.P., Phillips, M.S., Miller, T.E., Baird, E., and Powell, W. (1990) Chromosome location of genes controlling tolerance to salt (NaCl) and vigour in Hordeum vulgare and H. chilense. Heredity, 65, 99-107.
-
(1990)
chilense. Heredity
, vol.65
, pp. 99-107
-
-
Forster, B.P.1
Phillips, M.S.2
Miller, T.E.3
Baird, E.4
Powell, W.5
-
236
-
-
73949131661
-
Comparative analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination
-
Witzel, K., Weidner, A., Surabhi, G., Varshney, R.K., Kunze, G., Buck-Sorlin, G.H., Borner, A., and Mock, H. (2010) Comparative analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination. Plant Cell Environ., 33 (2), 211-222.
-
(2010)
Plant Cell Environ
, vol.33
, Issue.2
, pp. 211-222
-
-
Witzel, K.1
Weidner, A.2
Surabhi, G.3
Varshney, R.K.4
Kunze, G.5
Buck-sorlin, G.H.6
Borner, A.7
Mock, H.8
-
237
-
-
0032804175
-
Improving nitrogen use efficiency for cereal production
-
Raun, W.R. and Johnson, G.V. (1999) Improving nitrogen use efficiency for cereal production. Agron. J., 91, 357-363.
-
(1999)
Agron. J
, vol.91
, pp. 357-363
-
-
Raun, W.R.1
Johnson, G.V.2
-
238
-
-
0347928654
-
Mapping of QTL associated with nitrogen storage and remobilization in barley (Hordeum vulgare Hordeum vulgare) leaves
-
Mickelson, S., See, D., Meyer, F.D., Garner, J.P., Foster, C.R., Blake, T.K., and Fischer, A.M. (2003) Mapping of QTL associated with nitrogen storage and remobilization in barley (Hordeum vulgare Hordeum vulgare) leaves. J. Exp. Bot., 54 (383), 801-812.
-
(2003)
J. Exp. Bot
, vol.54
, Issue.383
, pp. 801-812
-
-
Mickelson, S.1
See, D.2
Meyer, F.D.3
Garner, J.P.4
Foster, C.R.5
Blake, T.K.6
Fischer, A.M.7
-
239
-
-
33645567257
-
Genomic regions involved in response to grain yield selection at high and low nitrogen fertilization in maize
-
Coque, M. and Gallais, A. (2006) Genomic regions involved in response to grain yield selection at high and low nitrogen fertilization in maize. Theor. Appl. Genet., 112, 1205-1220.
-
(2006)
Theor. Appl. Genet
, vol.112
, pp. 1205-1220
-
-
Coque, M.1
Gallais, A.2
-
240
-
-
1142281836
-
An approach to the genetics of nitrogen use efficiency in maize
-
Gallais, A. and Hirel, B. (2004) An approach to the genetics of nitrogen use efficiency in maize. J. Exp. Bot., 55 (396), 295-306.
-
(2004)
J. Exp. Bot
, vol.55
, Issue.396
, pp. 295-306
-
-
Gallais, A.1
Hirel, B.2
-
241
-
-
21344454860
-
Is root growth under phosphorus deficiency affected by source or sink limitations?
-
Wissuwa, M., Gamat, G., and Ismail, A.M. (2005) Is root growth under phosphorus deficiency affected by source or sink limitations? J. Exp. Bot., 56, 1943-1950.
-
(2005)
J. Exp. Bot
, vol.56
, pp. 1943-1950
-
-
Wissuwa, M.1
Gamat, G.2
Ismail, A.M.3
-
242
-
-
0030668621
-
Inheritance and chromosome location of Alp, a gene controlling aluminium tolerance in "Dayton" barley
-
Minella, E. and Sorrells, M.E. (1997) Inheritance and chromosome location of Alp, a gene controlling aluminium tolerance in "Dayton" barley. Plant Breed., 116 (5), 465-469.
-
(1997)
Plant Breed
, vol.116
, Issue.5
, pp. 465-469
-
-
Minella, E.1
Sorrells, M.E.2
-
243
-
-
0036941335
-
Identification of AFLP and microsatellite markers linked with an aluminium tolerance gene in barley (Hordeum vulgare Hordeum vulgare)
-
Raman, H., Moroni, S., Sato, K., Read, J., and Scott, J. (2002) Identification of AFLP and microsatellite markers linked with an aluminium tolerance gene in barley (Hordeum vulgare Hordeum vulgare). Theor. Appl. Genet., 105, 458-464.
-
(2002)
Theor. Appl. Genet
, vol.105
, pp. 458-464
-
-
Raman, H.1
Moroni, S.2
Sato, K.3
Read, J.4
Scott, J.5
-
244
-
-
34347331248
-
Highresolution mapping of the Alp locus and identification of a candidate gene HvMATE controlling aluminium tolerance in barley (Hordeum vulgare Hordeum vulgare)
-
Wang, J., Raman, H., Zhou, M., Ryan, P.R., Delhaize, E., Hebb, D.M., Coombes, N., and Mendham, N. (2007) Highresolution mapping of the Alp locus and identification of a candidate gene HvMATE controlling aluminium tolerance in barley (Hordeum vulgare Hordeum vulgare). Theor. Appl. Genet., 115 (2), 265-276.
-
(2007)
Theor. Appl. Genet
, vol.115
, Issue.2
, pp. 265-276
-
-
Wang, J.1
Raman, H.2
Zhou, M.3
Ryan, P.R.4
Delhaize, E.5
Hebb, D.M.6
Coombes, N.7
Mendham, N.8
-
245
-
-
31744439727
-
Molecular mapping of resistance to aluminium toxicity in barley
-
Raman, H., Wang, J.P., Read, B., Zhou, M.X., Vengatanagappa, S., Moroni, J.S., O'Bree, B., and Mendham, N. (2005) Molecular mapping of resistance to aluminium toxicity in barley. Proceedings of Plant and Animal Genome XIII Conference, January 15-19, 2005, San Diego, pp. 154.
-
(2005)
Proceedings of Plant and Animal Genome XIII Conference, January 15-19, 2005, San Diego
, pp. 154
-
-
Raman, H.1
Wang, J.P.2
Read, B.3
Zhou, M.X.4
Vengatanagappa, S.5
Moroni, J.S.6
O'Bree, B.7
Mendham, N.8
-
246
-
-
77954763726
-
A QTL analysis of aluminium tolerance in barley using gene-based markers
-
Navakode, S., Weidner, A., Varshney, R.K., Lohwasser, U., Scholz, U., and Borner, A. (2009) A QTL analysis of aluminium tolerance in barley using gene-based markers. Cereal Res. Commun., 37 (4), 531-540.
-
(2009)
Cereal Res. Commun
, vol.37
, Issue.4
, pp. 531-540
-
-
Navakode, S.1
Weidner, A.2
Varshney, R.K.3
Lohwasser, U.4
Scholz, U.5
Borner, A.6
-
247
-
-
9644257755
-
Boron tolerance in barley is mediated by efflux of B from the roots
-
Hayes, J.E. and Reid, R.J. (2004) Boron tolerance in barley is mediated by efflux of B from the roots. Plant Physiol., 136, 3376-3382.
-
(2004)
Plant Physiol
, vol.136
, pp. 3376-3382
-
-
Hayes, J.E.1
Reid, R.J.2
-
248
-
-
77955701080
-
Boron toxicity tolerance in barley through reduced expression of the multifunctional aquaporin HvNIP2;1
-
Schnurbusch, T., Hayes, J., Hrmova, M., Baumann, U., Ramesh, S.A., Tyerman, S.D., Langridge, P., and Sutton, T. (2010) Boron toxicity tolerance in barley through reduced expression of the multifunctional aquaporin HvNIP2;1. Plant Physiol., 153 (4), 1706-1715.
-
(2010)
Plant Physiol
, vol.153
, Issue.4
, pp. 1706-1715
-
-
Schnurbusch, T.1
Hayes, J.2
Hrmova, M.3
Baumann, U.4
Ramesh, S.A.5
Tyerman, S.D.6
Langridge, P.7
Sutton, T.8
-
249
-
-
61349119259
-
HvLs11 is a silicon influx transporter in barley
-
Chiba, Y., Mitani, N., Yamaji, N., and Ma, J.F. (2009) HvLs11 is a silicon influx transporter in barley. Plant J., 57 (5), 810-818.
-
(2009)
Plant J
, vol.57
, Issue.5
, pp. 810-818
-
-
Chiba, Y.1
Mitani, N.2
Yamaji, N.3
Ma, J.F.4
-
250
-
-
33847315221
-
Combining ability of waterlogging tolerance in barley (Hordeum vulgare Hordeum vulgare)
-
Zhou, M., Li, H.B., and Mendham, N.J. (2007) Combining ability of waterlogging tolerance in barley (Hordeum vulgare Hordeum vulgare). Crop Sci., 47, 278-284.
-
(2007)
Crop Sci
, vol.47
, pp. 278-284
-
-
Zhou, M.1
Li, H.B.2
Mendham, N.J.3
-
251
-
-
0041847077
-
Reviewof prospects for germplasm improvement for waterlogging tolerance in wheat, barley and oats
-
Setter, T.L. and Waters, I. (2003) Reviewof prospects for germplasm improvement for waterlogging tolerance in wheat, barley and oats. Plant Soil., 253, 1-33.
-
(2003)
Plant Soil
, vol.253
, pp. 1-33
-
-
Setter, T.L.1
Waters, I.2
-
252
-
-
0035141702
-
Expression and inheritance of tolerance to waterlogging stress in wheat
-
Boru, G., van Ginkel, M., Kronstad, W.E., and Boersma, L. (2001) Expression and inheritance of tolerance to waterlogging stress in wheat. Euphytica, 117, 91-98.
-
(2001)
Euphytica
, vol.117
, pp. 91-98
-
-
Boru, G.1
Ginkel, V.M.2
Kronstad, W.E.3
Boersma, L.4
-
253
-
-
0242654067
-
Evaluation of a QTL for waterlogging tolerance in Southern soybean germplasm
-
Reyna, N., Cornelious, B., Shannon, J.G., and Sneller, C.H. (2003) Evaluation of a QTL for waterlogging tolerance in Southern soybean germplasm. Crop Sci., 43, 2077-2082.
-
(2003)
Crop Sci
, vol.43
, pp. 2077-2082
-
-
Reyna, N.1
Cornelious, B.2
Shannon, J.G.3
Sneller, C.H.4
-
254
-
-
51749117168
-
Comparative mapping of quantitative trait loci associated with waterlogging tolerance in barley (Hordeum vulgare Hordeum vulgare)
-
Li, H.B., Vaillancourt, R., Mendham, N.J., and Zhou, M.X. (2008) Comparative mapping of quantitative trait loci associated with waterlogging tolerance in barley (Hordeum vulgare Hordeum vulgare). BMC Genomics, 9, 401.
-
(2008)
BMC Genomics
, vol.9
, pp. 401
-
-
Li, H.B.1
Vaillancourt, R.2
Mendham, N.J.3
Zhou, M.X.4
-
255
-
-
79953288177
-
Accurate phenotyping reveals better QTL for waterlogging tolerance in barley
-
doi: 10.1111/j.1439-0523.2010.01792.x
-
Zhou, M. (2010) Accurate phenotyping reveals better QTL for waterlogging tolerance in barley. Plant Breed. doi: 10.1111/j.1439-0523.2010.01792.x
-
(2010)
Plant Breed
-
-
Zhou, M.1
-
256
-
-
79958135365
-
Quantitative proteomic analyses of crop seedlings subjected to stress conditions; a commentary
-
doi: 10.1016/ j.phytochem.2010.10.017
-
Nanjo, Y., Nouri, M., and Komatsu, S. (2010) Quantitative proteomic analyses of crop seedlings subjected to stress conditions; a commentary. Phytochemistry. doi: 10.1016/ j.phytochem.2010.10.017
-
(2010)
Phytochemistry
-
-
Nanjo, Y.1
Nouri, M.2
Komatsu, S.3
-
257
-
-
48949117183
-
Optimizing protein extraction from plant tissues for enhanced proteomics analysis
-
Wang, W., Tai, F., and Chen, S. (2008) Optimizing protein extraction from plant tissues for enhanced proteomics analysis. J. Sep. Sci., 31, 2032-2039.
-
(2008)
J. Sep. Sci
, vol.31
, pp. 2032-2039
-
-
Wang, W.1
Tai, F.2
Chen, S.3
-
258
-
-
70149084269
-
Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function
-
Grobei, M.A., Qeli, E., Brunner, E., Rehrauer, H., Zhang, R., Roschitzki, B., Basler, K., Ahrens, C.H., and Grossniklaus, U. (2009) Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function. Genome Res., 19, 1786-1800.
-
(2009)
Genome Res
, vol.19
, pp. 1786-1800
-
-
Grobei, M.A.1
Qeli, E.2
Brunner, E.3
Rehrauer, H.4
Zhang, R.5
Roschitzki, B.6
Basler, K.7
Ahrens, C.H.8
Grossniklaus, U.9
-
259
-
-
68949206409
-
Applying mass spectrometry-based proteomics to genetics, genomics and network biology
-
Gstaiger, M. and Aebersold, R. (2009) Applying mass spectrometry-based proteomics to genetics, genomics and network biology. Nat. Rev. Genet., 10, 617-627.
-
(2009)
Nat. Rev. Genet
, vol.10
, pp. 617-627
-
-
Gstaiger, M.1
Aebersold, R.2
-
260
-
-
67651173106
-
Proteomics by mass spectrometry: approaches, advances, and applications
-
Yates, J.R., Ruse, C.I., and Nakorchevsky, A. (2009) Proteomics by mass spectrometry: approaches, advances, and applications. Ann. Rev. Biomed. Eng., 11, 49-79.
-
(2009)
Ann. Rev. Biomed. Eng
, vol.11
, pp. 49-79
-
-
Yates, J.R.1
Ruse, C.I.2
Nakorchevsky, A.3
-
261
-
-
34548442959
-
Crop proteomics: aim at sustainable agriculture of tomorrow
-
Salekdeh, G.H. and Komatsu, S. (2007) Crop proteomics: aim at sustainable agriculture of tomorrow. Proteomics, 7, 2976-2996.
-
(2007)
Proteomics
, vol.7
, pp. 2976-2996
-
-
Salekdeh, G.H.1
Komatsu, S.2
-
262
-
-
61549084035
-
Rice proteomics: ending phase I and the beginning of phase II
-
Agrawal, G.K., Jwa, N.S., and Rakwal, R. (2009) Rice proteomics: ending phase I and the beginning of phase II. Proteomics, 9, 935-963.
-
(2009)
Proteomics
, vol.9
, pp. 935-963
-
-
Agrawal, G.K.1
Jwa, N.S.2
Rakwal, R.3
-
263
-
-
63349106787
-
Soybean proteomics and its application to functional analysis
-
Komatsu, S. and Ahsan, N. (2009) Soybean proteomics and its application to functional analysis. J. Proteomics, 72, 325-336.
-
(2009)
J. Proteomics
, vol.72
, pp. 325-336
-
-
Komatsu, S.1
Ahsan, N.2
-
264
-
-
0037015062
-
Proteomic survey of metabolic pathways in rice
-
Koller, A., Washburn, M.P., Lange, B.M., Andon, N.L., Deciu, C., Haynes, P.A., Hays, L., Schieltz, D., Ulaszek, R., Wei, J., Wolters, D., and Yates, J.R. (2002) Proteomic survey of metabolic pathways in rice. Proc. Natl. Acad. Sci. USA, 99, 11969-11974.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 11969-11974
-
-
Koller, A.1
Washburn, M.P.2
Lange, B.M.3
Andon, N.L.4
Deciu, C.5
Haynes, P.A.6
Hays, L.7
Schieltz, D.8
Ulaszek, R.9
Wei, J.10
Wolters, D.11
Yates, J.R.12
-
265
-
-
0347755545
-
Rice proteome database based on twodimensional polyacrylamide gel electrophoresis: its status in 2003
-
Komatsu, S., Kojima, K., Suzuki, K., Ozaki, K., and Higo, K. (2004) Rice proteome database based on twodimensional polyacrylamide gel electrophoresis: its status in 2003. Nucleic Acids Res., 32, D388-D392.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Komatsu, S.1
Kojima, K.2
Suzuki, K.3
Ozaki, K.4
Higo, K.5
-
266
-
-
63349083032
-
Barley seed proteomics from spot to structures
-
Finnie, C. and Svensson, B. (2009) Barley seed proteomics from spot to structures. J. Proteomics, 72, 315-324.
-
(2009)
J. Proteomics
, vol.72
, pp. 315-324
-
-
Finnie, C.1
Svensson, B.2
-
267
-
-
61349162982
-
Integration of the barley genetic and seed proteome maps for chromosome 1H, 2H, 3H, 5H and 7H
-
Finnie, C., Bagge, M., Steenholdt, T., Ostergaard, O., Bak-Jensen, K.S., Backes, G., Jensen, A., Giese, H., Larsen, J., Roepstorff, P., and Svensson, B. (2009) Integration of the barley genetic and seed proteome maps for chromosome 1H, 2H, 3H, 5H and 7H. Funct. Integr. Genomics, 9, 135-143.
-
(2009)
Funct. Integr. Genomics
, vol.9
, pp. 135-143
-
-
Finnie, C.1
Bagge, M.2
Steenholdt, T.3
Ostergaard, O.4
Bak-jensen, K.S.5
Backes, G.6
Jensen, A.7
Giese, H.8
Larsen, J.9
Roepstorff, P.10
Svensson, B.11
-
268
-
-
0036010774
-
QTL analysis of proteome and transcriptome variations for dissecting the genetic architecture of complex traits in maize
-
Consoli, L., Lefevre, A., Zivy, M., de Vienne, D., and Damerval, C. (2002) QTL analysis of proteome and transcriptome variations for dissecting the genetic architecture of complex traits in maize. Plant Mol. Biol., 48, 575-581.
-
(2002)
Plant Mol. Biol
, vol.48
, pp. 575-581
-
-
Consoli, L.1
Lefevre, A.2
Zivy, M.3
Vienne, D.D.4
Damerval, C.5
-
269
-
-
77149172518
-
Proteomic analysis of temperature stress in plants
-
Neilson, K.A., Gammulla, C.G., Mirzaei, M., Imin, N., and Haynes, P.A. (2010) Proteomic analysis of temperature stress in plants. Proteomics, 10, 828-845.
-
(2010)
Proteomics
, vol.10
, pp. 828-845
-
-
Neilson, K.A.1
Gammulla, C.G.2
Mirzaei, M.3
Imin, N.4
Haynes, P.A.5
-
270
-
-
0037330377
-
Proteomic analysis of the effect of heat stress on hexaploid wheat grain: characterization of heat-responsive proteins from total endosperm
-
Majoul, T., Bancel, E., Triboi, E., Ben Hamida, J., and Branlard, G. (2003) Proteomic analysis of the effect of heat stress on hexaploid wheat grain: characterization of heat-responsive proteins from total endosperm. Proteomics, 3, 175-183.
-
(2003)
Proteomics
, vol.3
, pp. 175-183
-
-
Majoul, T.1
Bancel, E.2
Triboi, E.3
Hamida, B.J.4
Branlard, G.5
-
271
-
-
34948843692
-
Aproteomic approach in analyzing heat-responsive proteins in rice leaves
-
Lee, D.G., Ahsan, N., Lee, S.H., Kang, K.Y., Bahk, J.D., Lee, I.J., and Lee Dr, B.H. (2007) Aproteomic approach in analyzing heat-responsive proteins in rice leaves. Proteomics, 7, 3369-3383.
-
(2007)
Proteomics
, vol.7
, pp. 3369-3383
-
-
Lee, D.G.1
Ahsan, N.2
Lee, S.H.3
Kang, K.Y.4
Bahk, J.D.5
Lee, I.J.6
Lee Dr, B.H.7
-
272
-
-
3242794395
-
Proteomic analysis of small heat shock protein isoforms in barley shoots
-
Sule, A., Vanrobaeys, F., Hajos, G., van Beeumen, J., and Devreese, B. (2004) Proteomic analysis of small heat shock protein isoforms in barley shoots. Phytochemistry, 65, 1853-1863.
-
(2004)
Phytochemistry
, vol.65
, pp. 1853-1863
-
-
Sule, A.1
Vanrobaeys, F.2
Hajos, G.3
Beeumen, V.J.4
Devreese, B.5
-
273
-
-
84872532742
-
Abiotic stress responses: complexities in gene expression
-
in Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation (eds A. Pareek, S.K. Sopory, and H.J. Bohnert), Springer, Dordrecht
-
Panjabi-Sabharwal, V., Karan, R., Khan, T., and Pareek, A. (2010) Abiotic stress responses: complexities in gene expression, in Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation (eds A. Pareek, S.K. Sopory, and H.J. Bohnert), Springer, Dordrecht, pp. 177-198.
-
(2010)
, pp. 177-198
-
-
Panjabi-sabharwal, V.1
Karan, R.2
Khan, T.3
Pareek, A.4
-
274
-
-
16344368681
-
Proteome analysis of sugar beet leaves under drought stress
-
Hajheidari, M., Abdollahian-Noghabi, M., Askari, H., Heidari, M., Sadeghian, S.Y., Ober, E.S., and Salekdeh, G.H. (2005) Proteome analysis of sugar beet leaves under drought stress. Proteomics, 5, 950-960.
-
(2005)
Proteomics
, vol.5
, pp. 950-960
-
-
Hajheidari, M.1
Abdollahian-noghabi, M.2
Askari, H.3
Heidari, M.4
Sadeghian, S.Y.5
Ober, E.S.6
Salekdeh, G.H.7
-
275
-
-
34248183000
-
Proteomics uncovers a role for redox in drought tolerance in wheat
-
Hajheidari, M., Eivazi, A., Buchanan, B.B., Wong, J.H., Majidi, I., and Salekdeh, G.H. (2007) Proteomics uncovers a role for redox in drought tolerance in wheat. J. Proteome Res., 6, 1451-1460.
-
(2007)
J. Proteome Res
, vol.6
, pp. 1451-1460
-
-
Hajheidari, M.1
Eivazi, A.2
Buchanan, B.B.3
Wong, J.H.4
Majidi, I.5
Salekdeh, G.H.6
-
276
-
-
68949161024
-
Salt stress-induced alterations in the root proteome of barley genotypes with contrasting response towards salinity
-
Witzel, K., Weidner, A., Surabhi, G.K., Borner, A., and Mock, H.P. (2009) Salt stress-induced alterations in the root proteome of barley genotypes with contrasting response towards salinity. J. Exp. Bot., 60, 3545-3557.
-
(2009)
J. Exp. Bot
, vol.60
, pp. 3545-3557
-
-
Witzel, K.1
Weidner, A.2
Surabhi, G.K.3
Borner, A.4
Mock, H.P.5
-
277
-
-
58149235243
-
Proteome analysis of soybean hypocotyl and root under salt stress
-
Aghaei, K., Ehsanpour, A.A., Shah, A.H., and Komatsu, S. (2009) Proteome analysis of soybean hypocotyl and root under salt stress. Amino Acids, 36, 91-98.
-
(2009)
Amino Acids
, vol.36
, pp. 91-98
-
-
Aghaei, K.1
Ehsanpour, A.A.2
Shah, A.H.3
Komatsu, S.4
-
278
-
-
56949099175
-
Chilling stress-induced proteomic changes in rice roots
-
Lee, D.G., Ahsan, N., Lee, S.H., Lee, J.J., Bahka, J.D., Kanga, K.Y., and Lee, B.H. (2009) Chilling stress-induced proteomic changes in rice roots. J. Plant Physiol., 166, 1-11.
-
(2009)
J. Plant Physiol
, vol.166
, pp. 1-11
-
-
Lee, D.G.1
Ahsan, N.2
Lee, S.H.3
Lee, J.J.4
Bahka, J.D.5
Kanga, K.Y.6
Lee, B.H.7
-
279
-
-
77953841251
-
-
Laino, P., Shelton, D., Finnie, C., De Leonardis, A.M., Mastrangelo, A.M., Svensson, B., Lafiandra, D., and Masci, S. (2010) Comparative proteome analysis of metabolic proteins from seeds of durum wheat (cv. Proteomics, 10, 2359-2368.
-
(2010)
Proteomics
, vol.10
, pp. 2359-2368
-
-
Laino, P.1
Shelton, D.2
Finnie, C.3
Leonardis, D.A.M.4
Mastrangelo, A.M.5
Svensson, B.6
Lafiandra, D.7
Masci, S.8
-
280
-
-
34447117005
-
Increased abundance of proteins involved in phytosiderophore production in boron-tolerant barley
-
Patterson, J., Ford, K., Cassin, A., Natera, S., and Bacic, A. (2007) Increased abundance of proteins involved in phytosiderophore production in boron-tolerant barley. Plant Physiol., 144, 1612-1631.
-
(2007)
Plant Physiol
, vol.144
, pp. 1612-1631
-
-
Patterson, J.1
Ford, K.2
Cassin, A.3
Natera, S.4
Bacic, A.5
-
281
-
-
66449113658
-
Quantitative detection of changes in the leaf-mesophyll tonoplast proteome in dependency of a cadmium exposure of barley (Hordeum vulgare Hordeum vulgare) plants
-
Schneider, T., Schellenberg, M., Meyer, S., Keller, F., Gehrig, P., Riedel, K., Lee, Y., Eberl, L., and Martinoia, E. (2009) Quantitative detection of changes in the leaf-mesophyll tonoplast proteome in dependency of a cadmium exposure of barley (Hordeum vulgare Hordeum vulgare) plants. Proteomics, 9, 2668-2677.
-
(2009)
Proteomics
, vol.9
, pp. 2668-2677
-
-
Schneider, T.1
Schellenberg, M.2
Meyer, S.3
Keller, F.4
Gehrig, P.5
Riedel, K.6
Lee, Y.7
Eberl, L.8
Martinoia, E.9
-
282
-
-
66449129551
-
Recent developments in the application of proteomics to the analysis of plant responses to heavy metals
-
Ahsan, N., Renaut, J., and Komatsu, S. (2009) Recent developments in the application of proteomics to the analysis of plant responses to heavy metals. Proteomics, 9, 2602-2621.
-
(2009)
Proteomics
, vol.9
, pp. 2602-2621
-
-
Ahsan, N.1
Renaut, J.2
Komatsu, S.3
-
283
-
-
77956442496
-
Proteomics application of crops in the context of climatic changes
-
Hashiguchi, A., Ahsan, N., and Komatsu, S. (2010) Proteomics application of crops in the context of climatic changes. Food Res. Intern., 43, 1803-1813.
-
(2010)
Food Res. Intern
, vol.43
, pp. 1803-1813
-
-
Hashiguchi, A.1
Ahsan, N.2
Komatsu, S.3
-
284
-
-
7944225272
-
Differential change in root protein patterns of two wheat varieties under high and low nitrogen nutrition levels
-
Bahrman, N., Gouy, A., Devienne-Barret, F., Hirel, B., Vedele, F., and Le Gouis, J. (2005) Differential change in root protein patterns of two wheat varieties under high and low nitrogen nutrition levels. Plant Sci., 168, 81-87.
-
(2005)
Plant Sci
, vol.168
, pp. 81-87
-
-
Bahrman, N.1
Gouy, A.2
Devienne-barret, F.3
Hirel, B.4
Vedele, F.5
Gouis, L.J.6
-
285
-
-
79958712974
-
Proteomic analysis of low nitrogen stress-responsive proteins in roots of rice
-
doi: 10.1007/s11105-010-0268-z
-
Ding, C., You, J., Liu, Z., Rehmani, M., Wang, S., Li, G., Wang, Q., and Ding, Y. (2010) Proteomic analysis of low nitrogen stress-responsive proteins in roots of rice. Plant Mol. Biol. Rep. doi: 10.1007/s11105-010-0268-z
-
(2010)
Plant Mol. Biol. Rep
-
-
Ding, C.1
You, J.2
Liu, Z.3
Rehmani, M.4
Wang, S.5
Li, G.6
Wang, Q.7
Ding, Y.8
-
286
-
-
1542406264
-
Differential protein expression assessed by two-dimensional gel electrophoresis for two wheat varieties grown at four nitrogen levels
-
Bahrman, N., Le Gouis, J., Negroni, L., Amilhat, L., Leroy, P., Laine, A.L., and Jaminon, O. (2004) Differential protein expression assessed by two-dimensional gel electrophoresis for two wheat varieties grown at four nitrogen levels. Proteomics, 4, 709-719.
-
(2004)
Proteomics
, vol.4
, pp. 709-719
-
-
Bahrman, N.1
Gouis, L.J.2
Negroni, L.3
Amilhat, L.4
Leroy, P.5
Laine, A.L.6
Jaminon, O.7
-
287
-
-
84887849164
-
Proteomic analysis of nitrogen stress-responsive proteins in two rice cultivars differing in N utilization efficiency
-
Song, C., Zeng, F., Feibo, W., Ma, W., and Zhang, G. (2010) Proteomic analysis of nitrogen stress-responsive proteins in two rice cultivars differing in N utilization efficiency. J. Integr. OMICS, 1 (1), 78-87.
-
(2010)
J. Integr. OMICS
, vol.1
, Issue.1
, pp. 78-87
-
-
Song, C.1
Zeng, F.2
Feibo, W.3
Ma, W.4
Zhang, G.5
-
288
-
-
58149196188
-
GabiPD: the GABI primary database - a plant integrative "omics" database
-
Riano-Pachon, D.M., Nagel, A., Neigenfind, J., Wagner, R., Basekow, R., Weber, E., Mueller-Roeber, B., Diehl, S., and Kersten, B. (2009) GabiPD: the GABI primary database - a plant integrative "omics" database. Nucleic Acids Res., 37 (Suppl. 1), D954-D959.
-
(2009)
Nucleic Acids Res
, vol.37 Suppl
, Issue.1
-
-
Riano-pachon, D.M.1
Nagel, A.2
Neigenfind, J.3
Wagner, R.4
Basekow, R.5
Weber, E.6
Mueller-roeber, B.7
Diehl, S.8
Kersten, B.9
-
289
-
-
38549144807
-
MetaCrop: a detailed database of crop plant metabolism
-
Grafahrend-Belau, E., Weise, S., Koschutzki, D., Scholz, U., Junker, B.H., and Schreiber, F. (2008) MetaCrop: a detailed database of crop plant metabolism. Nucleic Acids Res., 36 (Suppl. 1), D954-D958.
-
(2008)
Nucleic Acids Res
, vol.36 Suppl
, Issue.1
-
-
Grafahrend-belau, E.1
Weise, S.2
Koschutzki, D.3
Scholz, U.4
Junker, B.H.5
Schreiber, F.6
-
290
-
-
38549132439
-
PlantTFDB: a comprehensive plant transcription factor database
-
Guo, A.Y., Chen, X., Gao, G., Zhang, H., Zhu, Q.H., Liu, X.C., Zhong, Y.F., Gu, X., He, K., and Luo, J. (2008) PlantTFDB: a comprehensive plant transcription factor database. Nucleic Acids Res., 36, D966-D969.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Guo, A.Y.1
Chen, X.2
Gao, G.3
Zhang, H.4
Zhu, Q.H.5
Liu, X.C.6
Zhong, Y.F.7
Gu, X.8
He, K.9
Luo, J.10
-
291
-
-
34047093266
-
Convergent evolution of genomic imprinting in plants and mammals
-
Feil, R. and Berger, F. (2007) Convergent evolution of genomic imprinting in plants and mammals. Trends Genet., 23, 192-199.
-
(2007)
Trends Genet
, vol.23
, pp. 192-199
-
-
Feil, R.1
Berger, F.2
-
292
-
-
51649111864
-
MicroRNA maturation and action: the expanding roles of ARGONAUTEs
-
Mallory, A.C., Elmayan, T., and Vaucheret, H. (2008) MicroRNA maturation and action: the expanding roles of ARGONAUTEs. Curr. Opin. Plant Biol., 11, 560-566.
-
(2008)
Curr. Opin. Plant Biol
, vol.11
, pp. 560-566
-
-
Mallory, A.C.1
Elmayan, T.2
Vaucheret, H.3
-
293
-
-
33746363573
-
An RNA-dependent RNA polymerase is required for paramutation in maize
-
Alleman, M., Sidorenko, L., Mcginnis, K., Seshadri, V., Dorweiler, J.E., White, J., Sikkink, K., and Chandler, V.L. (2006) An RNA-dependent RNA polymerase is required for paramutation in maize. Nature, 442, 295-298.
-
(2006)
Nature
, vol.442
, pp. 295-298
-
-
Alleman, M.1
Sidorenko, L.2
Mcginnis, K.3
Seshadri, V.4
Dorweiler, J.E.5
White, J.6
Sikkink, K.7
Chandler, V.L.8
-
294
-
-
77952974197
-
Strategies for epigenome analysis
-
, in Epigenomics(eds A.C. Ferguson-Smith, J.M. Greally, and R.A. Martienssen), Springer Science + Business Media
-
Brinkman, A.B. and Stunnenberg, H.G. (2009) Strategies for epigenome analysis , in Epigenomics(eds A.C. Ferguson-Smith, J.M. Greally, and R.A. Martienssen), Springer Science + Business Media, pp. 3-18.
-
(2009)
, pp. 3-18
-
-
Brinkman, A.B.1
Stunnenberg, H.G.2
-
295
-
-
84906545994
-
Sequencing the epigenome
-
, in Epigenomics(eds A.C. Ferguson-Smith, J.M. Greally, and R.A. Martienssen), Springer Science + Business Media
-
Meissner, A. and Bernstein, B.E. (2009) Sequencing the epigenome , in Epigenomics(eds A.C. Ferguson-Smith, J.M. Greally, and R.A. Martienssen), Springer Science + Business Media, pp. 19-36.
-
(2009)
, pp. 19-36
-
-
Meissner, A.1
Bernstein, B.E.2
-
296
-
-
33847032960
-
The mammalian epigenome
-
Bernstein, B.E., Meissner, A., and Lander, E.S. (2007) The mammalian epigenome. Cell, 128, 669-681.
-
(2007)
Cell
, vol.128
, pp. 669-681
-
-
Bernstein, B.E.1
Meissner, A.2
Lander, E.S.3
-
297
-
-
42749087226
-
Highly integrated single-base resolution maps of the epigenome in Arabidopsis
-
Lister, R., O'Malley, R.C., Tonti-Filippini, J., Gregory, B.D., Berry, C.C., Millar, A.H., and Ecker, J.R. (2008) Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell, 133, 523-536.
-
(2008)
Cell
, vol.133
, pp. 523-536
-
-
Lister, R.1
O'Malley, R.C.2
Tonti-filippini, J.3
Gregory, B.D.4
Berry, C.C.5
Millar, A.H.6
Ecker, J.R.7
-
298
-
-
74549137524
-
Unlocking the Arabidopsis epigenome
-
Reinders, J. and Paszkowski, J. (2009) Unlocking the Arabidopsis epigenome. Epigenetics, 4, 557-563.
-
(2009)
Epigenetics
, vol.4
, pp. 557-563
-
-
Reinders, J.1
Paszkowski, J.2
-
299
-
-
62349111195
-
Epigenetic regulation of stress responses in plants
-
Chinnusamy, V. and Zhu, J.K. (2009) Epigenetic regulation of stress responses in plants. Curr. Opin. Plant Biol., 12, 133-139.
-
(2009)
Curr. Opin. Plant Biol
, vol.12
, pp. 133-139
-
-
Chinnusamy, V.1
Zhu, J.K.2
-
300
-
-
77950990836
-
Chromatin regulation functions in plant abiotic stress responses
-
Kim, J.M., To, T.K., Nishioka, T., and Seki, M. (2010) Chromatin regulation functions in plant abiotic stress responses. Plant Cell Environ., 33 (4), 604-611.
-
(2010)
Plant Cell Environ
, vol.33
, Issue.4
, pp. 604-611
-
-
Kim, J.M.1
To, T.K.2
Nishioka, T.3
Seki, M.4
-
301
-
-
43249091345
-
Distinctive core histone post-translational modification patterns in Arabidopsis thaliana
-
doi: 10.1371/journal. pone.0001210
-
Zhang, K., Sridhar, V.V., Zhu, J., Kapoor, A., and Zhu, J.K. (2007) Distinctive core histone post-translational modification patterns in Arabidopsis thaliana. PLoS One, 2 (11), e1210. doi: 10.1371/journal. pone.0001210
-
(2007)
PLoS One
, vol.2
, Issue.11
-
-
Zhang, K.1
Sridhar, V.V.2
Zhu, J.3
Kapoor, A.4
Zhu, J.K.5
-
302
-
-
84900136687
-
Epigenetic regulation: chromatin modeling and small RNAs
-
in Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation (eds A. Ashwani Pareek, S.K. Sopory and H.J. Bohnert), Springer, Dordrecht
-
Chinnusamy, V. and Zhu, J.K. (2010) Epigenetic regulation: chromatin modeling and small RNAs, in Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation (eds A. Ashwani Pareek, S.K. Sopory and H.J. Bohnert), Springer, Dordrecht, pp. 217-241.
-
(2010)
, pp. 217-241
-
-
Chinnusamy, V.1
Zhu, J.K.2
-
303
-
-
33745839365
-
A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling
-
Wysocka, J., Swigut, T., Xiao, H., Milne, T.A., Kwon, S.Y., Landry, J., Kauer, M., Tackett, A.J., Chait, B.T., Badenhorst, P., Wu, C., and Allis, C.D. (2006) A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling. Nature, 442, 86-90.
-
(2006)
Nature
, vol.442
, pp. 86-90
-
-
Wysocka, J.1
Swigut, T.2
Xiao, H.3
Milne, T.A.4
Kwon, S.Y.5
Landry, J.6
Kauer, M.7
Tackett, A.J.8
Chait, B.T.9
Badenhorst, P.10
Wu, C.11
Allis, C.D.12
-
304
-
-
54149108452
-
Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana
-
Kim, J.M., To, T.K., Ishida, J., Morosawa, T., Kawashima, M., Matsui, A., Toyoda, T., Kimura, H., Shinozaki, K., and Seki, M. (2008) Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana. Plant Cell Physiol., 49, 1580-1588.
-
(2008)
Plant Cell Physiol
, vol.49
, pp. 1580-1588
-
-
Kim, J.M.1
To, T.K.2
Ishida, J.3
Morosawa, T.4
Kawashima, M.5
Matsui, A.6
Toyoda, T.7
Kimura, H.8
Shinozaki, K.9
Seki, M.10
-
305
-
-
70349522138
-
Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis
-
Kwon, C.S., Lee, D., Choi, G., and Chung, W.I. (2009) Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis. Plant J., 60, 112-121.
-
(2009)
Plant J
, vol.60
, pp. 112-121
-
-
Kwon, C.S.1
Lee, D.2
Choi, G.3
Chung, W.I.4
-
306
-
-
0035312795
-
Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold regulated gene expression
-
Stockinger, E.J., Mao, Y., Regier, M.K., Triezenberg, S.J., and Thomashow, M.F. (2001) Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold regulated gene expression. Nucleic Acids Res., 29, 1524-1533.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 1524-1533
-
-
Stockinger, E.J.1
Mao, Y.2
Regier, M.K.3
Triezenberg, S.J.4
Thomashow, M.F.5
-
307
-
-
0346463338
-
The histone-like protein H1-S and the response of tomato leaves to water deficit
-
Scippa, G.S., Di Michele, M., Onelli, E., Patrignani, G., Chiatante, D., and Bray, E.A. (2004) The histone-like protein H1-S and the response of tomato leaves to water deficit. J. Exp. Bot., 55, 99-109.
-
(2004)
J. Exp. Bot
, vol.55
, pp. 99-109
-
-
Scippa, G.S.1
Michele, D.M.2
Onelli, E.3
Patrignani, G.4
Chiatante, D.5
Bray, E.A.6
-
308
-
-
34047136095
-
Sequence and expression analysis of histone deacetylases in rice
-
Fu, W., Wu, K., and Duan, J. (2007) Sequence and expression analysis of histone deacetylases in rice. Biochem. Biophys. Res. Commun., 356, 843-850.
-
(2007)
Biochem. Biophys. Res. Commun
, vol.356
, pp. 843-850
-
-
Fu, W.1
Wu, K.2
Duan, J.3
-
309
-
-
33747866294
-
Dynamic and reversible changes in histone H3-Lys4 methylation and H3 acetylation occurring at submergence-inducible genes in rice
-
Tsuji, H., Saika, H., Tsutsumi, N., Hirai, A., and Nakazono, M. (2006) Dynamic and reversible changes in histone H3-Lys4 methylation and H3 acetylation occurring at submergence-inducible genes in rice. Plant Cell Physiol., 47, 995-1003.
-
(2006)
Plant Cell Physiol
, vol.47
, pp. 995-1003
-
-
Tsuji, H.1
Saika, H.2
Tsutsumi, N.3
Hirai, A.4
Nakazono, M.5
-
310
-
-
0036929765
-
Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes
-
Pandey, R., Muller, A., Napoli, C.A., Selinger, D.A., Pikaard, C.S., Richards, E.J., Bender, J., Mount, D.W., and Jorgensen, R.A. (2002) Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res., 30, 5036-5055.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 5036-5055
-
-
Pandey, R.1
Muller, A.2
Napoli, C.A.3
Selinger, D.A.4
Pikaard, C.S.5
Richards, E.J.6
Bender, J.7
Mount, D.W.8
Jorgensen, R.A.9
-
311
-
-
77649186483
-
Epigenetic chromatin modifiers in barley: III
-
Papaefthimiou, D., Likotrafiti, E., Kapazoglou, A., Bladenopoulos, K., and Tsaftaris, A. (2010) Epigenetic chromatin modifiers in barley: III. Isolation and characterization of the barley GNAT-MYST family of histone acetyltransferases and responses to exogenous ABA. Plant Physiol. Biochem., 48, 98-107.
-
(2010)
Isolation and characterization of the barley GNAT-MYST family of histone acetyltransferases and responses to exogenous ABA. Plant Physiol. Biochem
, vol.48
, pp. 98-107
-
-
Papaefthimiou, D.1
Likotrafiti, E.2
Kapazoglou, A.3
Bladenopoulos, K.4
Tsaftaris, A.5
-
312
-
-
72449170497
-
Epigenetic chromatin modifiers in barley: II
-
Demetriou, K., Kapazoglou, A., Bladenopoulos, K., and Tsaftaris, A.S. (2009) Epigenetic chromatin modifiers in barley: II. Characterization and expression analysis of the HDA1 familyof barley histone deacetylases during development and in response to jasmonic acid. Plant Mol. Biol. Rep., 28, 9-21.
-
(2009)
Characterization and expression analysis of the HDA1 familyof barley histone deacetylases during development and in response to jasmonic acid. Plant Mol. Biol. Rep
, vol.28
, pp. 9-21
-
-
Demetriou, K.1
Kapazoglou, A.2
Bladenopoulos, K.3
Tsaftaris, A.S.4
-
313
-
-
67650609683
-
Epigenetic chromatin modifiers in barley: I
-
Demetriou, K., Kapazoglou, A., Tondelli, A., Francia, E., Stanca, M.A., Bladenopoulos, K., and Tsaftaris, A.S. (2009) Epigenetic chromatin modifiers in barley: I. Cloning, mapping and expression analysis of the plant specific HD2 family of histone deacetylases from barley, during seed development and after hormonal treatment. Physiol. Plant., 136, 358-368.
-
(2009)
Cloning, mapping and expression analysis of the plant specific HD2 family of histone deacetylases from barley, during seed development and after hormonal treatment. Physiol. Plant
, vol.136
, pp. 358-368
-
-
Demetriou, K.1
Kapazoglou, A.2
Tondelli, A.3
Francia, E.4
Stanca, M.A.5
Bladenopoulos, K.6
Tsaftaris, A.S.7
-
314
-
-
69449097106
-
Diversity of Polycomb group complexes in plants: same rules, different players?
-
Hennig, L. and Derkacheva, M. (2009) Diversity of Polycomb group complexes in plants: same rules, different players? Trends Genet., 25, 414-423.
-
(2009)
Trends Genet
, vol.25
, pp. 414-423
-
-
Hennig, L.1
Derkacheva, M.2
-
315
-
-
77951050644
-
Epigenetic chromatin modifiers in barley: IV
-
Kapazoglou, A., Tondelli, A., Papaefthimiou, D., Ampatzidou, H., Francia, E., Stanca, M.A., Bladenopoulos, K., and Tsaftaris, A.S. (2010) Epigenetic chromatin modifiers in barley: IV. The study of barley Polycomb group (PcG) genes during seed development and in response to external ABA. BMC Plant Biol., 10, 73.
-
(2010)
The study of barley Polycomb group (PcG) genes during seed development and in response to external ABA. BMC Plant Biol
, vol.10
, pp. 73
-
-
Kapazoglou, A.1
Tondelli, A.2
Papaefthimiou, D.3
Ampatzidou, H.4
Francia, E.5
Stanca, M.A.6
Bladenopoulos, K.7
Tsaftaris, A.S.8
-
316
-
-
68449091773
-
Arabidopsis msi 1 is required for negative regulation of the response to drought stress
-
Alexandre, C., Moller-Steinbach, Y., Schonrock, N., Gruissem, W., and Hennig, L. (2009) Arabidopsis msi 1 is required for negative regulation of the response to drought stress. Mol. Plant, 2, 675-687.
-
(2009)
Mol. Plant
, vol.2
, pp. 675-687
-
-
Alexandre, C.1
Moller-steinbach, Y.2
Schonrock, N.3
Gruissem, W.4
Hennig, L.5
-
317
-
-
0037041422
-
Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase
-
Jackson, J.P., Lindroth, A.M., Cao, X., and Jacobsen, S.E. (2002) Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature, 416, 556-560.
-
(2002)
Nature
, vol.416
, pp. 556-560
-
-
Jackson, J.P.1
Lindroth, A.M.2
Cao, X.3
Jacobsen, S.E.4
-
318
-
-
0037058968
-
Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes
-
Cao, X. and Jacobsen, S.E. (2002) Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes. Proc. Natl. Acad. Sci. USA, 99, 16491-16498.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 16491-16498
-
-
Cao, X.1
Jacobsen, S.E.2
-
319
-
-
27144510677
-
The methylation cycle and its possible functions in barley endosperm development
-
Radchuk, V.V., Sreenivasulu, N., Radchuk, R.I., Wobus, U., and Weschke, W. (2005) The methylation cycle and its possible functions in barley endosperm development. Plant Mol. Biol., 59, 289-307.
-
(2005)
Plant Mol. Biol
, vol.59
, pp. 289-307
-
-
Radchuk, V.V.1
Sreenivasulu, N.2
Radchuk, R.I.3
Wobus, U.4
Weschke, W.5
-
320
-
-
34247399015
-
Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants
-
Choi, C.S. and Sano, H. (2007) Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants. Mol. Genet. Genomics, 277, 589-600.
-
(2007)
Mol. Genet. Genomics
, vol.277
, pp. 589-600
-
-
Choi, C.S.1
Sano, H.2
-
321
-
-
0037020179
-
Periodic DNA methylation in maize nucleosomes and demethylation by environmental stress
-
Steward, N., Ito, M., Yamaguchi, Y., Koizumi, N., and Sano, H. (2002) Periodic DNA methylation in maize nucleosomes and demethylation by environmental stress. J. Biol. Chem., 277, 37741-37746.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 37741-37746
-
-
Steward, N.1
Ito, M.2
Yamaguchi, Y.3
Koizumi, N.4
Sano, H.5
-
322
-
-
0030766180
-
Hypermethylation of tobacco heterochromatic loci in response to osmotic stress
-
Kovarik, A., Koukalova, B., Bezdek, M., and Opatrn, Z. (1997) Hypermethylation of tobacco heterochromatic loci in response to osmotic stress. Theor. Appl. Genet., 95, 301-306.
-
(1997)
Theor. Appl. Genet
, vol.95
, pp. 301-306
-
-
Kovarik, A.1
Koukalova, B.2
Bezdek, M.3
Opatrn, Z.4
-
323
-
-
0036871752
-
Analysis of cytosine methylation pattern in response to water deficit in pea root tips
-
Labra, M., Ghiani, A., Citterio, S., Sgorbati, S., Sala, F., Vannini, C., Ruffini-Castiglione, M., and Bracale, M. (2002) Analysis of cytosine methylation pattern in response to water deficit in pea root tips. Plant Biol. (Stuttg.), 4, 694-699.
-
(2002)
Plant Biol. (Stuttg.)
, vol.4
, pp. 694-699
-
-
Labra, M.1
Ghiani, A.2
Citterio, S.3
Sgorbati, S.4
Sala, F.5
Vannini, C.6
Ruffini-castiglione, M.7
Bracale, M.8
-
324
-
-
0347363608
-
Interrogating the transcriptome
-
Ruan, Y., Le Ber, P., Huing, H., and Liu, E.T. (2004) Interrogating the transcriptome. Trends Biotechnol., 22, 23-30.
-
(2004)
Trends Biotechnol
, vol.22
, pp. 23-30
-
-
Ruan, Y.1
Ber, L.P.2
Huing, H.3
Liu, E.T.4
-
325
-
-
49449094591
-
Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array
-
Matsui, A., Ishida, J., Morosawa, T., Mochizuki, Y., Kaminuma, E., Endo, T.A., Okamoto, M., Nambara, E., Nakajima, M., Kawashima, M., Satou, M., Kim, J.M., Kobayashi, N., Toyoda, T., Shinozaki, K., and Seki, M. (2008) Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array. Plant Cell Physiol., 49, 1135-1149.
-
(2008)
Plant Cell Physiol
, vol.49
, pp. 1135-1149
-
-
Matsui, A.1
Ishida, J.2
Morosawa, T.3
Mochizuki, Y.4
Kaminuma, E.5
Endo, T.A.6
Okamoto, M.7
Nambara, E.8
Nakajima, M.9
Kawashima, M.10
Satou, M.11
Kim, J.M.12
Kobayashi, N.13
Toyoda, T.14
Shinozaki, K.15
Seki, M.16
-
326
-
-
66949124248
-
Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays
-
Zeller, G., Henz, S.R., Widmer, C.K., Sachsenberg, T., Ratsch, G., Weigel, D., and Laubinger, S. (2009) Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays. Plant J., 58, 1068-1082.
-
(2009)
Plant J
, vol.58
, pp. 1068-1082
-
-
Zeller, G.1
Henz, S.R.2
Widmer, C.K.3
Sachsenberg, T.4
Ratsch, G.5
Weigel, D.6
Laubinger, S.7
-
327
-
-
77950418344
-
Research on plant abiotic stress responses in the post-genome era: past, present and future
-
Hirayama, T. and Shinozaki, K. (2010) Research on plant abiotic stress responses in the post-genome era: past, present and future. Plant J., 61, 1041-1052.
-
(2010)
Plant J
, vol.61
, pp. 1041-1052
-
-
Hirayama, T.1
Shinozaki, K.2
-
328
-
-
67349123973
-
Redefining microRNA targets
-
Seitz, H. (2009) Redefining microRNA targets. Curr. Biol., 19, 870-873.
-
(2009)
Curr. Biol
, vol.19
, pp. 870-873
-
-
Seitz, H.1
-
329
-
-
77950962979
-
Post-transcriptional gene regulation of salinity and drought responses by plant microRNAs
-
Covarrubias, A.A. and Reyes, J.L. (2010) Post-transcriptional gene regulation of salinity and drought responses by plant microRNAs. Plant Cell Environ., 33, 481-489.
-
(2010)
Plant Cell Environ
, vol.33
, pp. 481-489
-
-
Covarrubias, A.A.1
Reyes, J.L.2
-
330
-
-
29244490062
-
Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
-
Borsani, O., Zhu, J., Verslues, P.E., Sunkar, R., and Zhu, J.K. (2005) Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis. Cell, 123, 1279-1291.
-
(2005)
Cell
, vol.123
, pp. 1279-1291
-
-
Borsani, O.1
Zhu, J.2
Verslues, P.E.3
Sunkar, R.4
Zhu, J.K.5
-
331
-
-
33846537402
-
Identification of drought-induced microRNAs in rice
-
Zhao, B., Liang, R., Ge, L., Li, W., Xiao, H., Lin, H., Ruan, K., and Jin, Y. (2007) Identification of drought-induced microRNAs in rice. Biochem. Biophys. Res. Commun., 354, 585-590.
-
(2007)
Biochem. Biophys. Res. Commun
, vol.354
, pp. 585-590
-
-
Zhao, B.1
Liang, R.2
Ge, L.3
Li, W.4
Xiao, H.5
Lin, H.6
Ruan, K.7
Jin, Y.8
-
332
-
-
42149157716
-
Identification of novel and candidate miRNAs in rice by high throughput sequencing
-
Sunkar, R., Zhou, X., Zheng, Y., Zhang, W., and Zhu, J.K. (2008) Identification of novel and candidate miRNAs in rice by high throughput sequencing. BMC Plant Biol., 8, 25.
-
(2008)
BMC Plant Biol
, vol.8
, pp. 25
-
-
Sunkar, R.1
Zhou, X.2
Zheng, Y.3
Zhang, W.4
Zhu, J.K.5
-
333
-
-
77958040394
-
A computational-based update on microRNAs and their targets in barley (Hordeum vulgare Hordeum vulgare)
-
Colaiacovo, M., Subacchi, A., Bagnaresi, P., Lamontanara, A., Cattivelli, L., and Faccioli, P. (2010) A computational-based update on microRNAs and their targets in barley (Hordeum vulgare Hordeum vulgare). BMC Genomics, 11, 595.
-
(2010)
BMC Genomics
, vol.11
, pp. 595
-
-
Colaiacovo, M.1
Subacchi, A.2
Bagnaresi, P.3
Lamontanara, A.4
Cattivelli, L.5
Faccioli, P.6
-
334
-
-
11144355185
-
Arabidopsis histone deacetylase HDA6 is required for maintenance of transcriptional gene silencing and determines nuclear organization of rDNA repeats
-
Probst, A.V., Fagard, M., Proux, F., Mourrain, P., Boutet, S., Earley, K., Lawrence, R.J., Pikaard, C.S., Murfett, J., Furner, I., Vaucheret, H., and Scheid, O.M. (2004) Arabidopsis histone deacetylase HDA6 is required for maintenance of transcriptional gene silencing and determines nuclear organization of rDNA repeats. Plant Cell, 16, 1021-1034.
-
(2004)
Plant Cell
, vol.16
, pp. 1021-1034
-
-
Probst, A.V.1
Fagard, M.2
Proux, F.3
Mourrain, P.4
Boutet, S.5
Earley, K.6
Lawrence, R.J.7
Pikaard, C.S.8
Murfett, J.9
Furner, I.10
Vaucheret, H.11
Scheid, O.M.12
-
335
-
-
0037121952
-
HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA
-
Aufsatz, W., Mette, M.F., van der Winden, J., Matzke, M., and Matzke, A.J. (2002) HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA. EMBO J., 21, 6832-6841.
-
(2002)
EMBO J
, vol.21
, pp. 6832-6841
-
-
Aufsatz, W.1
Mette, M.F.2
Winden, V.D.J.3
Matzke, M.4
Matzke, A.J.5
-
336
-
-
33748603444
-
Metabolomics: current technologies and future trends
-
Hollywood, K., Brison, D.R., and Goodacre, R. (2006) Metabolomics: current technologies and future trends. Proteomics, 6, 4716-4723.
-
(2006)
Proteomics
, vol.6
, pp. 4716-4723
-
-
Hollywood, K.1
Brison, D.R.2
Goodacre, R.3
-
337
-
-
4444309760
-
Potential of metabolomics as a functional genomics tool
-
Bino, R.J., Hall, R.D., Fiehn, O., Kopka, J., Saito, K., Draper, J., Draper, J., Nikolau, B.J., Mendes, P., Roessner-Tunali, U., Beale, M.H., Trethewey, R.N., Lange, B.M., Wurtele, E.S., and Sumner, L.W. (2004) Potential of metabolomics as a functional genomics tool. Trends Plant Sci., 9, 418-425.
-
(2004)
Trends Plant Sci
, vol.9
, pp. 418-425
-
-
Bino, R.J.1
Hall, R.D.2
Fiehn, O.3
Kopka, J.4
Saito, K.5
Draper, J.6
Draper, J.7
Nikolau, B.J.8
Mendes, P.9
Roessner-tunali, U.10
Beale, M.H.11
Trethewey, R.N.12
Lange, B.M.13
Wurtele, E.S.14
Sumner, L.W.15
-
338
-
-
20244380782
-
Bioinformatics
-
the Golm Metabolome Database.
-
Kopka, J., Schauer, N., Krueger, S., Birkemeyer, C., Usadel, B., Burgmuller, E., Dormann, P., Weckwerth, W., Gibon, Y., Stitt, M., Willmitzer, L., Fernie, A.R., and Steinhauser, D. (2005) GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics, 21, 1635-1638.
-
(2005)
, vol.21
, pp. 1635-1638
-
-
Kopka, J.1
Schauer, N.2
Krueger, S.3
Birkemeyer, C.4
Usadel, B.5
Burgmuller, E.6
Dormann, P.7
Weckwerth, W.8
Gibon, Y.9
Stitt, M.10
Willmitzer, L.11
Fernie, A.R.12
Steinhauser, D.13
-
339
-
-
58849117570
-
MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites
-
Matsuda, F., Yonekura-Sakakibara, K., Niida, R., Kuromori, T., Shinozaki, K., and Saito, K. (2009) MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites. Plant J., 57, 555-577.
-
(2009)
Plant J
, vol.57
, pp. 555-577
-
-
Matsuda, F.1
Yonekura-sakakibara, K.2
Niida, R.3
Kuromori, T.4
Shinozaki, K.5
Saito, K.6
-
340
-
-
38149018511
-
Metabolomics for plant stress response
-
Shulaeva, V., Cortesa, D., Miller, G., and Mittler, R. (2008) Metabolomics for plant stress response. Physiol. Plant., 132, 199-208.
-
(2008)
Physiol. Plant
, vol.132
, pp. 199-208
-
-
Shulaeva, V.1
Cortesa, D.2
Miller, G.3
Mittler, R.4
-
341
-
-
6344245668
-
A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis
-
Cook, D., Fowler, S., Fiehn, O., and Thomashow, M.F. (2004) A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis. Proc. Natl. Acad. Sci. USA, 101, 15243-15248.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 15243-15248
-
-
Cook, D.1
Fowler, S.2
Fiehn, O.3
Thomashow, M.F.4
-
342
-
-
34250177304
-
Transcript and metabolite profiling during cold acclimation of Arabidopsis reveals an intricate relationship of cold-regulated gene expression with modifications in metabolite content
-
Kaplan, F., Kopka, J., Sung, D.Y., Zhao, W., Popp, M., Porat, R., and Guy, C.L. (2007) Transcript and metabolite profiling during cold acclimation of Arabidopsis reveals an intricate relationship of cold-regulated gene expression with modifications in metabolite content. Plant J., 50, 967-981.
-
(2007)
Plant J
, vol.50
, pp. 967-981
-
-
Kaplan, F.1
Kopka, J.2
Sung, D.Y.3
Zhao, W.4
Popp, M.5
Porat, R.6
Guy, C.L.7
-
343
-
-
33846636455
-
Alteration of oxidative and carbohydrate metabolism under abiotic stress in two rice (Oryza sativa Oryza sativa) genotypes contrasting in chilling tolerance
-
Morsy, M.R., Jouve, L., Hausman, J.F., Hoffmann, L., and Stewart, J.M. (2007) Alteration of oxidative and carbohydrate metabolism under abiotic stress in two rice (Oryza sativa Oryza sativa) genotypes contrasting in chilling tolerance. J. Plant Physiol., 164, 157-167.
-
(2007)
J. Plant Physiol
, vol.164
, pp. 157-167
-
-
Morsy, M.R.1
Jouve, L.2
Hausman, J.F.3
Hoffmann, L.4
Stewart, J.M.5
-
344
-
-
38149124829
-
Plant metabolomics reveals conserved and divergent metabolic responses to salinity
-
Sanchez, D.H., Siahpoosh, M.R., Roessner, U., Udvardi, M., and Kopka, J. (2008) Plant metabolomics reveals conserved and divergent metabolic responses to salinity. Physiol. Plant., 132, 209-219.
-
(2008)
Physiol. Plant
, vol.132
, pp. 209-219
-
-
Sanchez, D.H.1
Siahpoosh, M.R.2
Roessner, U.3
Udvardi, M.4
Kopka, J.5
-
345
-
-
33751077052
-
An investigation of boron toxicity in barley using metabolomics
-
Roessner, U., Patterson, J.H., Forbes, M.G., Fincher, G.B., Langridge, P., and Bacic, A. (2006) An investigation of boron toxicity in barley using metabolomics. Plant Physiol., 142, 1087-1101.
-
(2006)
Plant Physiol
, vol.142
, pp. 1087-1101
-
-
Roessner, U.1
Patterson, J.H.2
Forbes, M.G.3
Fincher, G.B.4
Langridge, P.5
Bacic, A.6
-
346
-
-
44449097527
-
Metabolite profiling reveals distinct changes in carbon and nitrogen metabolism in phosphate-deficient barley plants (Hordeum vulgare Hordeum vulgare)
-
Huang, C.Y., Roessner, U., Eickmeier, I., Genc, Y., Callahan, D.L., Shirley, N., Langridge, P., and Bacic, A. (2008) Metabolite profiling reveals distinct changes in carbon and nitrogen metabolism in phosphate-deficient barley plants (Hordeum vulgare Hordeum vulgare). Plant Cell Physiol., 49, 691-703.
-
(2008)
Plant Cell Physiol
, vol.49
, pp. 691-703
-
-
Huang, C.Y.1
Roessner, U.2
Eickmeier, I.3
Genc, Y.4
Callahan, D.L.5
Shirley, N.6
Langridge, P.7
Bacic, A.8
-
347
-
-
68249162469
-
Metabolic pathways involved in cold acclimation identified by integrated analysis of metabolites and transcripts regulated by DREB1A and DREB2A
-
Maruyama, K., Takeda, M., Kidokoro, S., Yamada, K., Sakuma, Y., Urano, K., Fujita, M., Yoshiwara, K., Matsukura, S., Morishita, Y., Sasaki, R., Suzuki, H., Saito, K., Shibata, D., Shinozaki, K., and Yamaguchi-Shinozaki, K. (2009) Metabolic pathways involved in cold acclimation identified by integrated analysis of metabolites and transcripts regulated by DREB1A and DREB2A. Plant Physiol., 150, 1972-1980.
-
(2009)
Plant Physiol
, vol.150
, pp. 1972-1980
-
-
Maruyama, K.1
Takeda, M.2
Kidokoro, S.3
Yamada, K.4
Sakuma, Y.5
Urano, K.6
Fujita, M.7
Yoshiwara, K.8
Matsukura, S.9
Morishita, Y.10
Sasaki, R.11
Suzuki, H.12
Saito, K.13
Shibata, D.14
Shinozaki, K.15
Yamaguchi-shinozaki, K.16
-
348
-
-
62149132565
-
Characterization of the ABA-regulated global responses to dehydration in Arabidopsis by metabolomics
-
Urano, K., Maruyama, K., Ogata, Y., Morishita, Y., Takeda, M., Sakurai, N., Suzuki, H., Saito, K., Shibata, D., Kobayashi, M., Yamaguchi-Shinozaki, K., and Shinozaki, K. (2009) Characterization of the ABA-regulated global responses to dehydration in Arabidopsis by metabolomics. Plant J., 57, 1065-1078.
-
(2009)
Plant J
, vol.57
, pp. 1065-1078
-
-
Urano, K.1
Maruyama, K.2
Ogata, Y.3
Morishita, Y.4
Takeda, M.5
Sakurai, N.6
Suzuki, H.7
Saito, K.8
Shibata, D.9
Kobayashi, M.10
Yamaguchi-shinozaki, K.11
Shinozaki, K.12
-
349
-
-
59149100506
-
System-wide molecular evidence for phenotypic buffering in Arabidopsis
-
Fu, J., Keurentjes, J.J., Bouwmeester, H., America, T., Verstappen, F.W., Ward, J.L., Beale, M.H., de Vos, R.C.H., Dijkstra, M., Scheltema, R.A., Johannes, F., Koornneef, M., Vreugdenhil, D., Breitling, R., and Jansen, R.C. (2009) System-wide molecular evidence for phenotypic buffering in Arabidopsis. Nat. Genet., 41, 166-167.
-
(2009)
Nat. Genet
, vol.41
, pp. 166-167
-
-
Fu, J.1
Keurentjes, J.J.2
Bouwmeester, H.3
America, T.4
Verstappen, F.W.5
Ward, J.L.6
Beale, M.H.7
Vos, D.R.C.H.8
Dijkstra, M.9
Scheltema, R.A.10
Johannes, F.11
Koornneef, M.12
Vreugdenhil, D.13
Breitling, R.14
Jansen, R.C.15
-
350
-
-
33745677702
-
Genetical metabolomics of flavonoid biosynthesis in Populus: a case study
-
Morreel, K., Goeminne, G., Storme, V., Sterck, L., Ralph, J., Coppieters, W., Breyne, P., Steenackers, M., Georges, M., Messens, E., and Boerjan, W. (2006) Genetical metabolomics of flavonoid biosynthesis in Populus: a case study. Plant J, 47 224-237.
-
(2006)
Plant J
, vol.47
, pp. 224-237
-
-
Morreel, K.1
Goeminne, G.2
Storme, V.3
Sterck, L.4
Ralph, J.5
Coppieters, W.6
Breyne, P.7
Steenackers, M.8
Georges, M.9
Messens, E.10
Boerjan, W.11
-
351
-
-
33645746673
-
Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement
-
Schauer, N., Semel, Y., Roessner, U., Gur, A., Balbo, I., Carrari, F., Pleban, T., Perez-Melis, A., Bruedigam, C., Kopka, J., Willmitzer, L., Zamir, D., and Fernie, A.R. (2006) Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement. Nat. Biotechnol., 24, 447-454.
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 447-454
-
-
Schauer, N.1
Semel, Y.2
Roessner, U.3
Gur, A.4
Balbo, I.5
Carrari, F.6
Pleban, T.7
Perez-melis, A.8
Bruedigam, C.9
Kopka, J.10
Willmitzer, L.11
Zamir, D.12
Fernie, A.R.13
-
352
-
-
46149084000
-
Relationship between metabolic and genomic diversity in sesame (Sesamum indicum Sesamum indicum)
-
Laurentin, H., Ratzinger, A., and Karlovsky, P. (2008) Relationship between metabolic and genomic diversity in sesame (Sesamum indicum Sesamum indicum). BMC Genomics, 9, 250.
-
(2008)
BMC Genomics
, vol.9
, pp. 250
-
-
Laurentin, H.1
Ratzinger, A.2
Karlovsky, P.3
-
353
-
-
66949150607
-
Ionomics: studying the social networkof mineral nutrients
-
Baxter, I. (2009) Ionomics: studying the social networkof mineral nutrients. Curr. Opin. Plant Biol., 12, 381-386.
-
(2009)
Curr. Opin. Plant Biol
, vol.12
, pp. 381-386
-
-
Baxter, I.1
-
354
-
-
44949161992
-
Ionomics and the study of the plant ionome
-
Salt, D.E., Baxter, I., and Lahner, B. (2008) Ionomics and the study of the plant ionome. Ann. Rev. Plant Biol., 59, 709-733.
-
(2008)
Ann. Rev. Plant Biol
, vol.59
, pp. 709-733
-
-
Salt, D.E.1
Baxter, I.2
Lahner, B.3
-
355
-
-
50149097467
-
The leaf ionome as a multivariable system to detect a plant's physiological status
-
Baxter, I.R., Vitek, O., Lahner, B., Muthukumar, B., Borghi, M., Morrissey, J., Guerinot, M.L., and Salt, D.E. (2008) The leaf ionome as a multivariable system to detect a plant's physiological status. Proc. Natl. Acad. Sci. USA, 105, 12081-12086.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 12081-12086
-
-
Baxter, I.R.1
Vitek, O.2
Lahner, B.3
Muthukumar, B.4
Borghi, M.5
Morrissey, J.6
Guerinot, M.L.7
Salt, D.E.8
-
356
-
-
0037777930
-
The genetics of phytate and phosphate accumulation in seeds and leaves of Arabidopsis thaliana, using natural variation
-
Bentsink, L., Yuan, K., Koorneef, M., and Vreugdenhil, D. (2003) The genetics of phytate and phosphate accumulation in seeds and leaves of Arabidopsis thaliana, using natural variation. Theor. Appl. Genet., 106, 1234-1243.
-
(2003)
Theor. Appl. Genet
, vol.106
, pp. 1234-1243
-
-
Bentsink, L.1
Yuan, K.2
Koorneef, M.3
Vreugdenhil, D.4
-
357
-
-
11144355629
-
Natural genetic variation in caesium (Cs) accumulation by Arabidopsis thaliana
-
Payne, K., Bowen, H., Hammond, J., Hampton, C., Lynn, J., Mead, A., Swarup, K., Bennett, M.J., White, P.J., and Broadley, M.R. (2004) Natural genetic variation in caesium (Cs) accumulation by Arabidopsis thaliana. New Phytol., 162, 535-548.
-
(2004)
New Phytol
, vol.162
, pp. 535-548
-
-
Payne, K.1
Bowen, H.2
Hammond, J.3
Hampton, C.4
Lynn, J.5
Mead, A.6
Swarup, K.7
Bennett, M.J.8
White, P.J.9
Broadley, M.R.10
-
358
-
-
33644641162
-
Mapping quantitative trait loci associated with selenate tolerance in Arabidopsis thaliana
-
Zhang, L., Byrne, P.F., and Pilon-Smits, E.A. (2006) Mapping quantitative trait loci associated with selenate tolerance in Arabidopsis thaliana. New Phytol., 170, 33-42.
-
(2006)
New Phytol
, vol.170
, pp. 33-42
-
-
Zhang, L.1
Byrne, P.F.2
Pilon-smits, E.A.3
-
359
-
-
3142529001
-
Natural variation and QTL analysis for cationic mineral content in seeds of Arabidopsis thaliana
-
Vreugdenhil, D., Aarts, M.G.M., Koornneef, M., Nelissen, H., and Ernst, W.H.O. (2004) Natural variation and QTL analysis for cationic mineral content in seeds of Arabidopsis thaliana. Plant Cell Environ., 27, 828-839.
-
(2004)
Plant Cell Environ
, vol.27
, pp. 828-839
-
-
Vreugdenhil, D.1
Aarts, M.G.M.2
Koornneef, M.3
Nelissen, H.4
Ernst, W.H.O.5
-
360
-
-
34347360764
-
Natural variation for sulfate content in Arabidopsis thaliana is highly controlled by APR2
-
Loudet, O., Saliba-Colombani, V., Camilleri, C., Calenge, F., Gaudon, V., Koprivova, A., North, K.A., Kopriva, S., and Daniel-Vedele, F. (2007) Natural variation for sulfate content in Arabidopsis thaliana is highly controlled by APR2. Nat. Genet., 39, 896-900.
-
(2007)
Nat. Genet
, vol.39
, pp. 896-900
-
-
Loudet, O.1
Saliba-colombani, V.2
Camilleri, C.3
Calenge, F.4
Gaudon, V.5
Koprivova, A.6
North, K.A.7
Kopriva, S.8
Daniel-vedele, F.9
-
361
-
-
77955236953
-
Natural genetic variation in selected populations of Arabidopsis thaliana is associated with ionomic differences
-
doi: 10.1371/journal. pone.0011081
-
Buescher, E., Ach berger, T., Amusan, I., Giannini, A., Ochsenfeld, C., Rus, A., Lahner, B., Hoekenga, O., Yakubova, E., Harper, J.F., Guerinot, M.L., Zhang, M., Salt, D.E., and Baxter, I.R. (2010) Natural genetic variation in selected populations of Arabidopsis thaliana is associated with ionomic differences. PLoS One, 5, e11081. doi: 10.1371/journal. pone.0011081
-
(2010)
PLoS One
, vol.5
-
-
Buescher, E.1
Ach Berger, T.2
Amusan, I.3
Giannini, A.4
Ochsenfeld, C.5
Rus, A.6
Lahner, B.7
Hoekenga, O.8
Yakubova, E.9
Harper, J.F.10
Guerinot, M.L.11
Zhang, M.12
Salt, D.E.13
Baxter, I.R.14
-
362
-
-
34247376601
-
Evolutionary control of leaf element composition in plants
-
Watanabe, T., Broadley, M.R., Jansen, S., White, P.J., Takada, J., Satake, K., Takamatsu, T., Tuah, S.J., and Osaki, M. (2007) Evolutionary control of leaf element composition in plants. New Phytol., 174, 516-523.
-
(2007)
New Phytol
, vol.174
, pp. 516-523
-
-
Watanabe, T.1
Broadley, M.R.2
Jansen, S.3
White, P.J.4
Takada, J.5
Satake, K.6
Takamatsu, T.7
Tuah, S.J.8
Osaki, M.9
-
363
-
-
77951023524
-
Future and frontiers of automated screening in plant sciences
-
Kolukisaoglu, U. and Thurow, K. (2010) Future and frontiers of automated screening in plant sciences. Plant Sci., 178, 476-484.
-
(2010)
Plant Sci
, vol.178
, pp. 476-484
-
-
Kolukisaoglu, U.1
Thurow, K.2
-
364
-
-
77955911906
-
High-throughput shoot imaging to study drought responses
-
Berger, B., Parent, B., and Tester, M. (2010) High-throughput shoot imaging to study drought responses. J. Exp. Bot., 61, 3519-3528.
-
(2010)
J. Exp. Bot
, vol.61
, pp. 3519-3528
-
-
Berger, B.1
Parent, B.2
Tester, M.3
-
365
-
-
77955895129
-
New phenotyping methods for screening wheat and barley for beneficial responses to water deficit
-
Munns, R., James, R.A., Sirault, X.R.R., Furbank, R.T., and Jones, H.G. (2010) New phenotyping methods for screening wheat and barley for beneficial responses to water deficit. J. Exp. Bot., 61, 3499-3507.
-
(2010)
J. Exp. Bot
, vol.61
, pp. 3499-3507
-
-
Munns, R.1
James, R.A.2
Sirault, X.R.R.3
Furbank, R.T.4
Jones, H.G.5
-
366
-
-
76749151039
-
Radically rethinking agriculture for the 21st century
-
Fedoroff, N.V., Battisti, D.S., Beachy, R.N., Cooper, P.J.M., Fischhoff, D.A., Hodges, C.N., Knauf, V.C., Lobell, D., Mazur, B.J., Molden, D., Reynolds, M.P., Ronald, P.C., Rosegrant, M.W., Sanchez, P.A., Vonshak, A., and Zhu, J.-K. (2010) Radically rethinking agriculture for the 21st century. Science, 327, 833-834.
-
(2010)
Science
, vol.327
, pp. 833-834
-
-
Fedoroff, N.V.1
Battisti, D.S.2
Beachy, R.N.3
Cooper, P.J.M.4
Fischhoff, D.A.5
Hodges, C.N.6
Knauf, V.C.7
Lobell, D.8
Mazur, B.J.9
Molden, D.10
Reynolds, M.P.11
Ronald, P.C.12
Rosegrant, M.W.13
Sanchez, P.A.14
Vonshak, A.15
Zhu, J.-K.16
-
367
-
-
78651268618
-
A systems biology model of the regulatory network in Populus leaves reveals interacting regulators and conserved regulation
-
Street, N., Jansson, S., and Hvidsten, T.R. (2011) A systems biology model of the regulatory network in Populus leaves reveals interacting regulators and conserved regulation. BMC Plant Biol., 11, 13.
-
(2011)
BMC Plant Biol
, vol.11
, pp. 13
-
-
Street, N.1
Jansson, S.2
Hvidsten, T.R.3
-
368
-
-
67651094045
-
Three Arabidopsis SnRK2 protein kinases, SRK2D/ SnRK2.2, SRK2E/SnRK2.6/OST1 and SRK21/SnRK2.3, involved in ABA signaling are essential for the control of seed development and dormancy
-
Nakashima, K., Fujita, Y., Kanamori, N., Katagiri, T., Umezawa, T., Kidokoro, S., Maruyama, K., Yoshida, T., Ishiyama, K., Kobayashi, M., Shinozaki, K., and Shinozaki, K.Y. (2009) Three Arabidopsis SnRK2 protein kinases, SRK2D/ SnRK2.2, SRK2E/SnRK2.6/OST1 and SRK21/SnRK2.3, involved in ABA signaling are essential for the control of seed development and dormancy. Plant Cell Physiol., 50, 1345-1363.
-
(2009)
Plant Cell Physiol
, vol.50
, pp. 1345-1363
-
-
Nakashima, K.1
Fujita, Y.2
Kanamori, N.3
Katagiri, T.4
Umezawa, T.5
Kidokoro, S.6
Maruyama, K.7
Yoshida, T.8
Ishiyama, K.9
Kobayashi, M.10
Shinozaki, K.11
Shinozaki, K.Y.12
-
369
-
-
9444236902
-
Networks of transcription factors with roles in environmental stress response
-
Chen, W.J. and Zhu, T. (2004) Networks of transcription factors with roles in environmental stress response. Trends Plant Sci., 12, 591-596.
-
(2004)
Trends Plant Sci
, vol.12
, pp. 591-596
-
-
Chen, W.J.1
Zhu, T.2
-
370
-
-
0036010572
-
Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses
-
Chen, W., Provart, N.J., Glazebrook, J., Katagiri, F., Chang, H.S., Eulgem, T., Mauch, F., Luan, S., Zou, G., Whitham, S.A., Budworth, P.R., Tao, Y., Xie, Z., Chen, X., Lam, S., Kreps, J.A., Harper, J.F., Si-Ammour, A., Mauch-Mani, B., Heinlein, M., Kobayashi, K., Hohn, T., Dangl, J.L., Wang, X., and Zhu, T. (2002) Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses. Plant Cell, 14 (3), 559-574.
-
(2002)
Plant Cell
, vol.14
, Issue.3
, pp. 559-574
-
-
Chen, W.1
Provart, N.J.2
Glazebrook, J.3
Katagiri, F.4
Chang, H.S.5
Eulgem, T.6
Mauch, F.7
Luan, S.8
Zou, G.9
Whitham, S.A.10
Budworth, P.R.11
Tao, Y.12
Xie, Z.13
Chen, X.14
Lam, S.15
Kreps, J.A.16
Harper, J.F.17
Si-ammour, A.18
Mauch-mani, B.19
Heinlein, M.20
Kobayashi, K.21
Hohn, T.22
Dangl, J.L.23
Wang, X.24
Zhu, T.25
more..
-
371
-
-
33745210764
-
Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks
-
Fujita, M., Fujita, Y., Noutoshi, Y., Takahashi, F., Narusaka, Y., Yamaguchi-Shinozaki, K., and Shinozaki, K. (2006) Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks. Curr. Opin. Plant Biol., 9, 436-442.
-
(2006)
Curr. Opin. Plant Biol
, vol.9
, pp. 436-442
-
-
Fujita, M.1
Fujita, Y.2
Noutoshi, Y.3
Takahashi, F.4
Narusaka, Y.5
Yamaguchi-shinozaki, K.6
Shinozaki, K.7
-
372
-
-
35748935562
-
Integration of Arabidopsis thaliana stress related transcript profiles, promoter structures, and cell-specific expression
-
Ma, S. and Bohnert, H.J. (2007) Integration of Arabidopsis thaliana stress related transcript profiles, promoter structures, and cell-specific expression. Genome Biol., 8, R49.
-
(2007)
Genome Biol
, vol.8
-
-
Ma, S.1
Bohnert, H.J.2
-
373
-
-
4043074968
-
Novel and stress-regulated microRNAs and other small RNA from Arabidopsis
-
Sunkar, R. and Zhu, J.K. (2004) Novel and stress-regulated microRNAs and other small RNA from Arabidopsis. Plant Cell, 16, 2001-2019.
-
(2004)
Plant Cell
, vol.16
, pp. 2001-2019
-
-
Sunkar, R.1
Zhu, J.K.2
-
374
-
-
77951687828
-
"Omics" analyses of regulatory networks in plant abiotic stress responses
-
Urano, K., Kurihara, Y., Seki, M., and Shinozaki, K. (2010) "Omics" analyses of regulatory networks in plant abiotic stress responses. Curr. Opin. Plant Biol., 13 (2), 132-138.
-
(2010)
Curr. Opin. Plant Biol
, vol.13
, Issue.2
, pp. 132-138
-
-
Urano, K.1
Kurihara, Y.2
Seki, M.3
Shinozaki, K.4
-
375
-
-
65349102226
-
A unified mechanism of action for volatile isoprenoids in plant abiotic stress
-
Vickers, C.E., Gershenzon, J., Lerdau, M.T., and Loreto, F. (2009) A unified mechanism of action for volatile isoprenoids in plant abiotic stress. Nat. Chem. Biol., 5, 283-291.
-
(2009)
Nat. Chem. Biol
, vol.5
, pp. 283-291
-
-
Vickers, C.E.1
Gershenzon, J.2
Lerdau, M.T.3
Loreto, F.4
-
376
-
-
77649236474
-
Multiple stress factors and the emission of plant VOCs
-
doi: 10.1016/j.tplants.2010.01.006
-
Holopainen, J.K. and Gershenzon, J. (2010) Multiple stress factors and the emission of plant VOCs. Trends Plant Sci., 15 (3). doi: 10.1016/j.tplants.2010.01.006
-
(2010)
Trends Plant Sci
, vol.15
, Issue.3
-
-
Holopainen, J.K.1
Gershenzon, J.2
-
377
-
-
44249114568
-
Cell identity mediates the response of Arabidopsis roots to abiotic stress
-
Dinneny, J.R., Long, T.A., Wang, J.Y., Jung, J.W., Mace, D., Pointer, S., Barron, C., Brady, S.M., Schiefelbein, J., and Benfey, P.N. (2008) Cell identity mediates the response of Arabidopsis roots to abiotic stress. Science, 320, 942-945.
-
(2008)
Science
, vol.320
, pp. 942-945
-
-
Dinneny, J.R.1
Long, T.A.2
Wang, J.Y.3
Jung, J.W.4
Mace, D.5
Pointer, S.6
Barron, C.7
Brady, S.M.8
Schiefelbein, J.9
Benfey, P.N.10
-
378
-
-
48549088204
-
Quantitative trait loci and crop performance under abiotic stress: where do we stand?
-
Collins, N.C., Tardieu, F., and Tuberosa, R. (2008) Quantitative trait loci and crop performance under abiotic stress: where do we stand? Plant Physiol., 147, 469-486.
-
(2008)
Plant Physiol
, vol.147
, pp. 469-486
-
-
Collins, N.C.1
Tardieu, F.2
Tuberosa, R.3
-
379
-
-
0022372110
-
A possible technique for isolating genic DNA for quantitative traits in plants
-
Robertson, D.S. (1985) A possible technique for isolating genic DNA for quantitative traits in plants. J. Theor. Biol., 117, 1-10.
-
(1985)
J. Theor. Biol
, vol.117
, pp. 1-10
-
-
Robertson, D.S.1
-
380
-
-
79951982591
-
Differential and integral views of genetics in computational systems biology
-
Noble, D. (2011) Differential and integral views of genetics in computational systems biology. Interface Focus, 1 (1), 7-15.
-
(2011)
Interface Focus
, vol.1
, Issue.1
, pp. 7-15
-
-
Noble, D.1
-
381
-
-
41549094923
-
Plant systems biology comes of age
-
Yuan, J.S., Galbraith, D.W., Dai, S.Y., Griffin, P., and Stewart, C.N. (2008) Plant systems biology comes of age. Trends Plant Sci., 13 (4), 165-171.
-
(2008)
Trends Plant Sci
, vol.13
, Issue.4
, pp. 165-171
-
-
Yuan, J.S.1
Galbraith, D.W.2
Dai, S.Y.3
Griffin, P.4
Stewart, C.N.5
-
382
-
-
78049480086
-
Root hair systems biology
-
doi: 10.1016/j. tplants.2010.08.010
-
Libault, M., Brechenmacher, L., Cheng, J., Xu, D., and Stacey, G. (2010) Root hair systems biology. Trends Plant Sci., 15 (11). doi: 10.1016/j. tplants.2010.08.010
-
(2010)
Trends Plant Sci
, vol.15
, Issue.11
-
-
Libault, M.1
Brechenmacher, L.2
Cheng, J.3
Xu, D.4
Stacey, G.5
-
383
-
-
49649089054
-
Molecular eco-systems biology: towards an understanding of community function
-
Raes, J. and Bork, P. (2008) Molecular eco-systems biology: towards an understanding of community function. Nat. Rev., 6, 693-698.
-
(2008)
Nat. Rev
, vol.6
, pp. 693-698
-
-
Raes, J.1
Bork, P.2
-
384
-
-
79954423109
-
Redefining plant systems biology: from cell to ecosystem
-
doi: 10.1016/ j.tplants.2010.12.002
-
Keurentjes, J.J.B., Angenent, G.C., Dicke, M., Dos Santos, V.A.P.M., Molenaar, J., van der Putten, W.H., de Ruiter, P.C., Struik, P.C., and Thomma, B.P.H.J. (2010) Redefining plant systems biology: from cell to ecosystem. Trends Plant Sci. doi: 10.1016/ j.tplants.2010.12.002
-
(2010)
Trends Plant Sci
-
-
Keurentjes, J.J.B.1
Angenent, G.C.2
Dicke, M.3
Santos, D.V.A.P.M.4
Molenaar, J.5
Putten, V.D.W.H.6
Ruiter, D.P.C.7
Struik, P.C.8
Thomma, B.P.H.J.9
-
385
-
-
73349138846
-
Advances in genetical genomics of plants
-
Joosen, R.V.L., Ligterink, W., Hilhorst, H.W.M., and Keurentjes, J.J.B. (2009) Advances in genetical genomics of plants. Curr. Genomics, 10 (8), 540-549.
-
(2009)
Curr. Genomics
, vol.10
, Issue.8
, pp. 540-549
-
-
Joosen, R.V.L.1
Ligterink, W.2
Hilhorst, H.W.M.3
Keurentjes, J.J.B.4
-
386
-
-
75949084606
-
Systems biology uncovers the foundation of natural genetic diversity
-
Kliebenstein, D.J. (2010) Systems biology uncovers the foundation of natural genetic diversity. Plant Physiol., 152, 480-486.
-
(2010)
Plant Physiol
, vol.152
, pp. 480-486
-
-
Kliebenstein, D.J.1
-
387
-
-
52949116045
-
Generalizing genetical genomics: getting added value from environmental perturbation
-
Li, Y., Breitling, R., and Jansen, R.C. (2008) Generalizing genetical genomics: getting added value from environmental perturbation. Trends Genet., 24 (10), 518-524.
-
(2008)
Trends Genet
, vol.24
, Issue.10
, pp. 518-524
-
-
Li, Y.1
Breitling, R.2
Jansen, R.C.3
-
388
-
-
38149106625
-
Integration of metabolomics and proteomics in molecular plant physiology: coping with the complexity by data-dimensionality reduction
-
Weckwerth, W. (2008) Integration of metabolomics and proteomics in molecular plant physiology: coping with the complexity by data-dimensionality reduction. Physiol. Plant., 132 (2), 176-189.
-
(2008)
Physiol. Plant
, vol.132
, Issue.2
, pp. 176-189
-
-
Weckwerth, W.1
-
389
-
-
41749125216
-
Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants
-
doi: 10.1186/1752-0509-2-16
-
Weston, D.J., Gunter, L.E., Rogers, A., and Wullschleger, S.D. (2008) Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants. BMC Syst. Biol., 2 (16). doi: 10.1186/1752-0509-2-16
-
(2008)
BMC Syst. Biol
, vol.2
, Issue.16
-
-
Weston, D.J.1
Gunter, L.E.2
Rogers, A.3
Wullschleger, S.D.4
-
390
-
-
0742305866
-
Network biology: understanding the cell's functional organization
-
Barabasi, A.L. and Oltvai, Z.N. (2004) Network biology: understanding the cell's functional organization. Nat. Rev. Genet., 5, 101-113.
-
(2004)
Nat. Rev. Genet
, vol.5
, pp. 101-113
-
-
Barabasi, A.L.1
Oltvai, Z.N.2
-
391
-
-
68449103579
-
The systems biology graphical notation
-
Le Novere, N., Hucka, M., Mi, H., Moodie, S., Schreiber, F., Sorokin, A., Demir, E., Wegner, K., Aladjem, M.I., Wimalaratne, S.M., Bergman, F.T., Gauges, R., Ghaza, P., Kawaji, H., Li, L., Matsuoka, Y., Villeger, A., Boyd, S.E., Calzone, L., Courtot, M., Dogrusoz, U., Freeman, T.C., Funahashi, A., Ghosh, S., Jouraku, A., Kim, S., Kolpakov, F., Luna, A., Sahle, S., Schmidt, E., Watterson, S., Wu, G., Goryanin, I., Kell, D.B., Sander, C., Sauro, H., Snoep, J.L., Kohn, K., and Kitano, H. (2009) The systems biology graphical notation. Nat. Biotechnol., 27 735-741.
-
(2009)
Nat. Biotechnol
, vol.27
, pp. 735-741
-
-
Novere, L.N.1
Hucka, M.2
Mi, H.3
Moodie, S.4
Schreiber, F.5
Sorokin, A.6
Demir, E.7
Wegner, K.8
Aladjem, M.I.9
Wimalaratne, S.M.10
Bergman, F.T.11
Gauges, R.12
Ghaza, P.13
Kawaji, H.14
Li, L.15
Matsuoka, Y.16
Villeger, A.17
Boyd, S.E.18
Calzone, L.19
Courtot, M.20
Dogrusoz, U.21
Freeman, T.C.22
Funahashi, A.23
Ghosh, S.24
Jouraku, A.25
Kim, S.26
Kolpakov, F.27
Luna, A.28
Sahle, S.29
Schmidt, E.30
Watterson, S.31
Wu, G.32
Goryanin, I.33
Kell, D.B.34
Sander, C.35
Sauro, H.36
Snoep, J.L.37
Kohn, K.38
Kitano, H.39
more..
-
392
-
-
79251550128
-
ePlant and the 3D datadisplay initiative: integrative systems biology on the World Wide Web
-
Fucile, G., Di Biase, D., Nahal, H., La, G., Khodabandeh, S., Chen, Y., Easley, K., Christendat, D., Kelley, L., and Provart, N.J. (2011) ePlant and the 3D datadisplay initiative: integrative systems biology on the World Wide Web. PLoS One, 6 (1), e15237.
-
(2011)
PLoS One
, vol.6
, Issue.1
-
-
Fucile, G.1
Biase, D.D.2
Nahal, H.3
La, G.4
Khodabandeh, S.5
Chen, Y.6
Easley, K.7
Christendat, D.8
Kelley, L.9
Provart, N.J.10
-
393
-
-
58949096406
-
Towards systems genetic analyses in barley: integration of phenotypic, expression and genotype data into GeneNetwork
-
Druka, A., Druka, I., Centeno, A.G., Li, H., Sun, Z., Thomas, W.T., Bonar, N., Steffenson, B.J., Ullrich, S.E., Kleinhofs, A., Wise, R.P., Close, T.J., Potokina, E., Luo, Z., Wagner, C., Schweizer, G.F., Marshall, D.F., Kearsey, M.J., Williams, R.W., and Waugh, R. (2008) Towards systems genetic analyses in barley: integration of phenotypic, expression and genotype data into GeneNetwork. BMC Genet., 18 (9), 73.
-
(2008)
BMC Genet
, vol.18
, Issue.9
, pp. 73
-
-
Druka, A.1
Druka, I.2
Centeno, A.G.3
Li, H.4
Sun, Z.5
Thomas, W.T.6
Bonar, N.7
Steffenson, B.J.8
Ullrich, S.E.9
Kleinhofs, A.10
Wise, R.P.11
Close, T.J.12
Potokina, E.13
Luo, Z.14
Wagner, C.15
Schweizer, G.F.16
Marshall, D.F.17
Kearsey, M.J.18
Williams, R.W.19
Waugh, R.20
more..
-
394
-
-
0031714655
-
The population genetics of adaptation: the distribution of factors fixed during adaptive evolution
-
Orr, H.A. (1998) The population genetics of adaptation: the distribution of factors fixed during adaptive evolution. Evolution, 52, 935-949.
-
(1998)
Evolution
, vol.52
, pp. 935-949
-
-
Orr, H.A.1
-
395
-
-
1842474811
-
Quantitative genetic variation: a post-modern view
-
Farrall, M. (2004) Quantitative genetic variation: a post-modern view. Hum. Mol. Genet., 13, R1-R7.
-
(2004)
Hum. Mol. Genet
, vol.13
-
-
Farrall, M.1
-
396
-
-
68449083317
-
The genetic architecture of maize flowering time
-
Buckler, E.S., Holland, J.B., Bradbury, P.J., Acharya, C.B., Brown, P.J., Browne, C., Ersoz, E., Flint-Garcia, S., Garcia, A., Glaubitz, J.C., Goodman, M.M., Harjes, C., Guill, K., Kroon, D.E., Larsson, S., Lepak, N.K., Li, H., Mitchell, S.E., Pressoir, G., Peiffer, J.A., Rosas, M.O., Rocheford, T.R., Romay, M.C., Romero, S., Salvo, S., Sanchez Villeda, H., da Silva, H.S., Sun, Q., Tian, F., Upadyayula, N., Ware, D., Yates, H., Yu, J., Zhang, Z., Kresovich, S., and McMullen, M.D. (2009) The genetic architecture of maize flowering time. Science, 325 (5941), 714-718.
-
(2009)
Science
, vol.325
, Issue.5941
, pp. 714-718
-
-
Buckler, E.S.1
Holland, J.B.2
Bradbury, P.J.3
Acharya, C.B.4
Brown, P.J.5
Browne, C.6
Ersoz, E.7
Flint-garcia, S.8
Garcia, A.9
Glaubitz, J.C.10
Goodman, M.M.11
Harjes, C.12
Guill, K.13
Kroon, D.E.14
Larsson, S.15
Lepak, N.K.16
Li, H.17
Mitchell, S.E.18
Pressoir, G.19
Peiffer, J.A.20
Rosas, M.O.21
Rocheford, T.R.22
Romay, M.C.23
Romero, S.24
Salvo, S.25
Villeda, S.H.26
Silva, D.H.S.27
Sun, Q.28
Tian, F.29
Upadyayula, N.30
Ware, D.31
Yates, H.32
Yu, J.33
Zhang, Z.34
Kresovich, S.35
McMullen, M.D.36
more..
-
397
-
-
78549289532
-
Towards identifying genes underlying ecologically relevanttraits in Arabidopsis thaliana
-
Bergelson, J. and Roux, F. (2010) Towards identifying genes underlying ecologically relevanttraits in Arabidopsis thaliana. Nat. Rev. Genet., 11, 867-879.
-
(2010)
Nat. Rev. Genet
, vol.11
, pp. 867-879
-
-
Bergelson, J.1
Roux, F.2
-
398
-
-
77951204515
-
Dissection and modelling of abiotic stress tolerance in plants
-
Tardieu, F. and Tuberosa, R. (2010) Dissection and modelling of abiotic stress tolerance in plants. Curr. Opin. Plant Biol., 13 (2), 206-212.
-
(2010)
Curr. Opin. Plant Biol
, vol.13
, Issue.2
, pp. 206-212
-
-
Tardieu, F.1
Tuberosa, R.2
-
399
-
-
0000817669
-
An effect of uterine environment upon skeletal morphology of the mouse
-
McLaren, A. and Michie, D. (1958) An effect of uterine environment upon skeletal morphology of the mouse. Nature, 181, 1147-1148.
-
(1958)
Nature
, vol.181
, pp. 1147-1148
-
-
McLaren, A.1
Michie, D.2
-
400
-
-
39749111196
-
Plant miRNAs and abiotic stress responses
-
Lu, X.Y. and Huang, X.L. (2008) Plant miRNAs and abiotic stress responses. Biochem. Biophys. Res. Commun., 368, 458-462.
-
(2008)
Biochem. Biophys. Res. Commun
, vol.368
, pp. 458-462
-
-
Lu, X.Y.1
Huang, X.L.2
-
401
-
-
77955926543
-
Non-coding small RNAs responsive to abiotic stress in wheat (Triticum aestivum Triticum aestivum)
-
Yao, Y., Ni, Z., Peng, H., Sun, F., Xin, M., Sunkar, R., Zhu, J., and Sun, Q. (2010) Non-coding small RNAs responsive to abiotic stress in wheat (Triticum aestivum Triticum aestivum). Funct. Integr. Genomics, 10, 187-190.
-
(2010)
Funct. Integr. Genomics
, vol.10
, pp. 187-190
-
-
Yao, Y.1
Ni, Z.2
Peng, H.3
Sun, F.4
Xin, M.5
Sunkar, R.6
Zhu, J.7
Sun, Q.8
-
402
-
-
46149097613
-
Diamonds in the rough: mRNA-like non-coding RNAs
-
Rymarquis, L.A., Kastenmayer, J.P., Huttenhofer, A.G., and Green, P.J. (2008) Diamonds in the rough: mRNA-like non-coding RNAs. Trends Plant Sci., 13 (7), 329-334.
-
(2008)
Trends Plant Sci
, vol.13
, Issue.7
, pp. 329-334
-
-
Rymarquis, L.A.1
Kastenmayer, J.P.2
Huttenhofer, A.G.3
Green, P.J.4
-
403
-
-
79955125389
-
Long non-coding RNAs and chromatin regulation
-
De Lucia, F. and Dean, C. (2010) Long non-coding RNAs and chromatin regulation. Curr. Opin. Plant Biol., 14, 1-6.
-
(2010)
Curr. Opin. Plant Biol
, vol.14
, pp. 1-6
-
-
Lucia, D.F.1
Dean, C.2
-
404
-
-
62349098622
-
Conserved noncoding sequences (CNSs) in higher plants
-
Freeling, M. and Subramaniam, S. (2009) Conserved noncoding sequences (CNSs) in higher plants. Curr. Opin. Plant Biol., 12 (2), 126-132.
-
(2009)
Curr. Opin. Plant Biol
, vol.12
, Issue.2
, pp. 126-132
-
-
Freeling, M.1
Subramaniam, S.2
-
405
-
-
20344407697
-
Evolution of DNA sequence nonhomologies among maize inbreds
-
Brunner, S., Fengler, K., Morgante, M., Tingey, S., and Rafalski, A. (2005) Evolution of DNA sequence nonhomologies among maize inbreds. Plant Cell, 17, 343-360.
-
(2005)
Plant Cell
, vol.17
, pp. 343-360
-
-
Brunner, S.1
Fengler, K.2
Morgante, M.3
Tingey, S.4
Rafalski, A.5
-
406
-
-
34547398400
-
Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize
-
Salvi, S., Sponza, G., Morgante, M., Tomes, D., Niu, X., Fengler, K.A., Meeley, R., Ananiev, E.V., Svitashev, S., Bruggemann, E., Li, B., Hainey, C.F., Radovic, S., Zaina, G., Rafalski, J.A., Tingey, S.V., Miao, G.H., Phillips, R.L., and Tuberosa, R. (2007) Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize. Proc. Natl. Acad. Sci. USA, 104 (27), 11376-11381.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, Issue.27
, pp. 11376-11381
-
-
Salvi, S.1
Sponza, G.2
Morgante, M.3
Tomes, D.4
Niu, X.5
Fengler, K.A.6
Meeley, R.7
Ananiev, E.V.8
Svitashev, S.9
Bruggemann, E.10
Li, B.11
Hainey, C.F.12
Radovic, S.13
Zaina, G.14
Rafalski, J.A.15
Tingey, S.V.16
Miao, G.H.17
Phillips, R.L.18
Tuberosa, R.19
-
407
-
-
67649488241
-
Asymmetric allele-specific expression in relation to developmental variation and drought stress in barley hybrids
-
von Korff, M., Radovic, S., Choumane, W., Stamati, K., Udupa, S.M., Grando, S., Ceccarelli, S., Mackay, I., Powell, W., Baum, M., and Morgante, M. (2009) Asymmetric allele-specific expression in relation to developmental variation and drought stress in barley hybrids. Plant J., 59 (1), 14-26.
-
(2009)
Plant J
, vol.59
, Issue.1
, pp. 14-26
-
-
Korff, V.M.1
Radovic, S.2
Choumane, W.3
Stamati, K.4
Udupa, S.M.5
Grando, S.6
Ceccarelli, S.7
Mackay, I.8
Powell, W.9
Baum, M.10
Morgante, M.11
-
408
-
-
41949131536
-
Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays
-
doi: 10.1371/ journal.pgen.1000032
-
Zhang, X., Shiu, S.H., Cal, A., and Borevitz, J.O. (2008) Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays. PLoS Genet., 4 (3), e1000032. doi: 10.1371/ journal.pgen.1000032
-
(2008)
PLoS Genet
, vol.4
, Issue.3
-
-
Zhang, X.1
Shiu, S.H.2
Cal, A.3
Borevitz, J.O.4
-
409
-
-
34447569298
-
Copy number variants and genetic traits: closer to the resolution of phenotypic to genotypic variability
-
Beckmann, J.S., Estivill, X., and Antonarakis, S.E. (2007) Copy number variants and genetic traits: closer to the resolution of phenotypic to genotypic variability. Nat. Rev. Genet., 8, 639-646.
-
(2007)
Nat. Rev. Genet
, vol.8
, pp. 639-646
-
-
Beckmann, J.S.1
Estivill, X.2
Antonarakis, S.E.3
-
410
-
-
78049412267
-
Diversity of human copy number variation and multicopy genes
-
and 1000 Genomes Project
-
Sudmant, P.H., Kitzman, J.O., Antonacci, F., Alkan, C., Malig, M., Tsalenko, A., Sampas, N., Bruhn, L., Shendure, J., Eichler, E.E., and 1000 Genomes Project (2010) Diversity of human copy number variation and multicopy genes. Science, 330 (6004), 641-646.
-
(2010)
Science
, vol.330
, Issue.6004
, pp. 641-646
-
-
Sudmant, P.H.1
Kitzman, J.O.2
Antonacci, F.3
Alkan, C.4
Malig, M.5
Tsalenko, A.6
Sampas, N.7
Bruhn, L.8
Shendure, J.9
Eichler, E.E.10
-
411
-
-
35948991932
-
Copy number variants and common disorders: filling the gaps and exploring complexity in genome-wide association studies
-
Estivill, X. and Armengol, L. (2007) Copy number variants and common disorders: filling the gaps and exploring complexity in genome-wide association studies. PLoS Genet., 3 (10), e190.
-
(2007)
PLoS Genet
, vol.3
, Issue.10
-
-
Estivill, X.1
Armengol, L.2
-
412
-
-
77958462555
-
Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales
-
DeBolt, S. (2010) Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales. Genome Biol. Evol., 2, 441-453.
-
(2010)
Genome Biol. Evol
, vol.2
, pp. 441-453
-
-
DeBolt, S.1
-
413
-
-
75849136053
-
Allelic genome structural variations in maize detected by array comparative genome hybridization
-
Belo, A., Beatty, M.K., Hondred, D., Fengler, K.A., Li, B., and Rafalski, A. (2010) Allelic genome structural variations in maize detected by array comparative genome hybridization. Theor. Appl. Genet., 120 (2), 355-67.
-
(2010)
Theor. Appl. Genet
, vol.120
, Issue.2
, pp. 355-367
-
-
Belo, A.1
Beatty, M.K.2
Hondred, D.3
Fengler, K.A.4
Li, B.5
Rafalski, A.6
-
414
-
-
78549273825
-
Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor
-
Swanson-Wagner, R.A., Eichten, S.R., Kumari, S., Tiffin, P., Stein, J.C., Ware, D., and Springer, N.M. (2010) Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor. Genome Res., 20, 1689-1699.
-
(2010)
Genome Res
, vol.20
, pp. 1689-1699
-
-
Swanson-wagner, R.A.1
Eichten, S.R.2
Kumari, S.3
Tiffin, P.4
Stein, J.C.5
Ware, D.6
Springer, N.M.7
-
415
-
-
33847320129
-
Transposable elements and the plant pan-genomes
-
Morgante, M., De Paoli, E., and Radovic, S. (2007) Transposable elements and the plant pan-genomes. Curr. Opin. Plant Biol., 10, 149-155.
-
(2007)
Curr. Opin. Plant Biol
, vol.10
, pp. 149-155
-
-
Morgante, M.1
Paoli, D.E.2
Radovic, S.3
-
416
-
-
48249136116
-
Applying modelling experiences from the past to shape crop systems biology: the need to converge crop physiology and functional genomics
-
Yin, X. and Struik, P.C. (2008) Applying modelling experiences from the past to shape crop systems biology: the need to converge crop physiology and functional genomics. New Phytol., 179 (3), 629-642.
-
(2008)
New Phytol
, vol.179
, Issue.3
, pp. 629-642
-
-
Yin, X.1
Struik, P.C.2
-
417
-
-
78649488563
-
The developmental dynamics of the maize leaf transcriptome
-
Li, P., Ponnala, L., Gandotra, N., Wang, L., Si, Y., Tausta, S.L., Kebrom, T.H., Provart, N., Patel, R., Myers, C.R., Reidel, E.J., Turgeon, R., Liu, P., Sun, Q., Nelson, T., and Brutnell, T.P. (2010) The developmental dynamics of the maize leaf transcriptome. Nat. Genet., 42 (12), 1060-1067.
-
(2010)
Nat. Genet
, vol.42
, Issue.12
, pp. 1060-1067
-
-
Li, P.1
Ponnala, L.2
Gandotra, N.3
Wang, L.4
Si, Y.5
Tausta, S.L.6
Kebrom, T.H.7
Provart, N.8
Patel, R.9
Myers, C.R.10
Reidel, E.J.11
Turgeon, R.12
Liu, P.13
Sun, Q.14
Nelson, T.15
Brutnell, T.P.16
-
418
-
-
0028873914
-
Possibility of increasing yield potential of rice by reducing panicle height in the canopy. I. Effects of panicle on light interception and canopy photosynthesis
-
Setter, T.L., Conocono, E.A., Egdane, J.A., and Kropff, M.J. (1995) Possibility of increasing yield potential of rice by reducing panicle height in the canopy. I. Effects of panicle on light interception and canopy photosynthesis. Aust. J. Plant Physiol., 22, 441-451.
-
(1995)
Aust. J. Plant Physiol
, vol.22
, pp. 441-451
-
-
Setter, T.L.1
Conocono, E.A.2
Egdane, J.A.3
Kropff, M.J.4
-
419
-
-
33746843948
-
Supercharging rice photosynthesis to increase yield
-
Mitchell, P.L. and Sheehy, J.E. (2006) Supercharging rice photosynthesis to increase yield. New Phytol., 171 (4), 688-693.
-
(2006)
New Phytol
, vol.171
, Issue.4
, pp. 688-693
-
-
Mitchell, P.L.1
Sheehy, J.E.2
-
420
-
-
33751238801
-
Models for navigating biological complexity in breeding improved crop plants
-
Hammer, G., Cooper, M., Tardieu, F., Welch, S., Walsh, B., van Eeuwijk, F., Chapman, S., and Podlich, D. (2006) Models for navigating biological complexity in breeding improved crop plants. Trends Plant Sci., 11 (12), 587-593.
-
(2006)
Trends Plant Sci
, vol.11
, Issue.12
, pp. 587-593
-
-
Hammer, G.1
Cooper, M.2
Tardieu, F.3
Welch, S.4
Walsh, B.5
Eeuwijk, V.F.6
Chapman, S.7
Podlich, D.8
-
421
-
-
0037269169
-
A genetic neural network model of flowering time control in Arabidopsis thaliana
-
Welch, S.M., Roe, J.L., and Dong, Z. (2003) A genetic neural network model of flowering time control in Arabidopsis thaliana. Agron. J., 95, 71-81.
-
(2003)
Agron. J
, vol.95
, pp. 71-81
-
-
Welch, S.M.1
Roe, J.L.2
Dong, Z.3
-
422
-
-
84885722525
-
Molecular breeding. Molecular breeding
-
in Tomato Genomics of Fruit and Vegetable Crops Series (ed. J. Labate), Science Publishers Inc., Enfield, in press.
-
Sabatini, E., Beretta, M., Sala, T., Acciarri, N., Milc, J., and Pecchioni, N. (2011) Molecular breeding. Molecular breeding, in Tomato Genomics of Fruit and Vegetable Crops Series (ed. J. Labate), Science Publishers Inc., Enfield, in press.
-
(2011)
-
-
Sabatini, E.1
Beretta, M.2
Sala, T.3
Acciarri, N.4
Milc, J.5
Pecchioni, N.6
-
423
-
-
84920054196
-
Molecular markers for gene pyramiding and disease resistance breeding in barley
-
in Genomics Assisted Crop Improvement: Vol. 2, Genomics Applications in Crops (eds R.K. Varshney and R. Tuberosa), Springer, Dordrecht
-
Friedt, W. and Ordon, F. (2007) Molecular markers for gene pyramiding and disease resistance breeding in barley, in Genomics Assisted Crop Improvement: Vol. 2, Genomics Applications in Crops (eds R.K. Varshney and R. Tuberosa), Springer, Dordrecht, pp. 81-101.
-
(2007)
, pp. 81-101
-
-
Friedt, W.1
Ordon, F.2
-
424
-
-
70649094426
-
QTL alleles from a winter feed type can improve malting quality in barley
-
Laido, G., Barabaschi, D., Tondelli, A., Gianinetti, A., Stanca, A.M., Li Destri Nicosia, O., Di Fonzo, N., Francia, E., and Pecchioni, N. (2009) QTL alleles from a winter feed type can improve malting quality in barley. Plant Breed., 128 (6), 598-605.
-
(2009)
Plant Breed
, vol.128
, Issue.6
, pp. 598-605
-
-
Laido, G.1
Barabaschi, D.2
Tondelli, A.3
Gianinetti, A.4
Stanca, A.M.5
Nicosia, L.D.O.6
Fonzo, D.N.7
Francia, E.8
Pecchioni, N.9
-
425
-
-
14744269256
-
Molecular marker-assisted selection for enhanced yield in malting barley
-
Schmierer, D.A., Kandemir, N., Kudrna, D.A., Jones, B.L., Ullrich, S.E., and Kleinhofs, A. (2004) Molecular marker-assisted selection for enhanced yield in malting barley. Mol. Breed., 14, 463-473.
-
(2004)
Mol. Breed
, vol.14
, pp. 463-473
-
-
Schmierer, D.A.1
Kandemir, N.2
Kudrna, D.A.3
Jones, B.L.4
Ullrich, S.E.5
Kleinhofs, A.6
-
426
-
-
8744310545
-
Development of PCR-based markers on chromosome 5H for assisted selection of frost-tolerant genotypes in barley
-
Toth, B., Francia, E., Rizza, F., Stanca, A.M., Galiba, G., and Pecchioni, N. (2004) Development of PCR-based markers on chromosome 5H for assisted selection of frost-tolerant genotypes in barley. Mol. Breed., 14 (3), 265-273.
-
(2004)
Mol. Breed
, vol.14
, Issue.3
, pp. 265-273
-
-
Toth, B.1
Francia, E.2
Rizza, F.3
Stanca, A.M.4
Galiba, G.5
Pecchioni, N.6
-
427
-
-
68949162236
-
Marker-assisted characterization of frost tolerance in barley (Hordeum vulgare Hordeum vulgare)
-
Akar, T., Francia, E., Tondelli, A., Rizza, F., Stanca, A.M., and Pecchioni, N. (2009) Marker-assisted characterization of frost tolerance in barley (Hordeum vulgare Hordeum vulgare). Plant Breed., 128, 381-386.
-
(2009)
Plant Breed
, vol.128
, pp. 381-386
-
-
Akar, T.1
Francia, E.2
Tondelli, A.3
Rizza, F.4
Stanca, A.M.5
Pecchioni, N.6
-
428
-
-
77956170006
-
Associations of PCR markers with freezing tolerance and photosynthetic acclimation to cold in winter barley
-
Rapacz, M., Tyrka, M., Gut, M., and Mikulski, W. (2010) Associations of PCR markers with freezing tolerance and photosynthetic acclimation to cold in winter barley. Euphytica, 175 (3), 293-301.
-
(2010)
Euphytica
, vol.175
, Issue.3
, pp. 293-301
-
-
Rapacz, M.1
Tyrka, M.2
Gut, M.3
Mikulski, W.4
-
429
-
-
34648826025
-
A marker-assisted backcross approach for developing submergence-tolerant rice cultivars
-
Neeraja, C., Maghirang-Rodriguez, R., Pamplona, A., Heuer, S., Collard, B., Septiningsih, E., Vergara, G., Sanchez, D., Xu, K., Ismail, A.M., and Mackill, D.J. (2007) A marker-assisted backcross approach for developing submergence-tolerant rice cultivars. Theor. Appl. Genet., 115, 767-776.
-
(2007)
Theor. Appl. Genet
, vol.115
, pp. 767-776
-
-
Neeraja, C.1
Maghirang-rodriguez, R.2
Pamplona, A.3
Heuer, S.4
Collard, B.5
Septiningsih, E.6
Vergara, G.7
Sanchez, D.8
Xu, K.9
Ismail, A.M.10
Mackill, D.J.11
-
430
-
-
84885719670
-
-
8 February
-
http://www.generationcp.org/sp5/?da=09148937 (8 February 2011) .
-
(2011)
-
-
-
431
-
-
28244450248
-
Genomics-assisted breeding for crop improvement
-
Varshney, R.K., Graner, A., and Sorrells, M.E. (2005) Genomics-assisted breeding for crop improvement. Trends Plant Sci., 10 (12), 621-630.
-
(2005)
Trends Plant Sci
, vol.10
, Issue.12
, pp. 621-630
-
-
Varshney, R.K.1
Graner, A.2
Sorrells, M.E.3
-
433
-
-
84885803562
-
The future of cereal/wheat breeding in Europe
-
Brussels, 11.10.2010.
-
Kazmann, E. and Muller, R. (2010) The future of cereal/wheat breeding in Europe. ESA-SCP, Brussels, 11.10.2010.
-
(2010)
ESA-SCP
-
-
Kazmann, E.1
Muller, R.2
|