Natural variation and QTL analysis for cationic mineral content in seeds of Arabidopsis thaliana

Plant, Cell and Environment

Volumn 27, Issue 7, 2004, Pages 828-839

  Vreugdenhil, D ^a   Aarts, M G M ^a   Koornneef, M ^a   Nelissen, H ^b   Ernst, W H O ^b  

^a WAGENINGEN UNIVERSITY   (Netherlands)

^b VU UNIVERSITY AMSTERDAM   (Netherlands)

Author keywords

Iron; Micronutrients; Minerals; Quantitative trait loci; Zinc

Indexed keywords

GENETIC VARIATION;

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA;

EID: 3142529001     PISSN: 01407791     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-3040.2004.01189.x     Document Type: Article

References (58)

1. Alonso-Blanco C., Peelers A.J.M., Koornneef M., Lister C., Dean C., van den Bosch N., Pot J. & Kuiper M.T.R. (1998) Development of an AFLP based linkage map of Ler, Col and Cvi Arabidopsis thaliana ecotypes and construction of a Ler/Cvi recombinant inbred line population. Plant Journal 14, 259-271.
2. Axelsen K.B. & Palmgren M.G. (2001) Inventory of the superfamily of P-type ion pumps in Arabidopsis. Plant Physiology 126, 696-706.
3. Balint A.F., Kovacs G., Erdei L. & Sutka J. (2001) Comparison of the Cu, Zn, Fe, Ca and Mg contents of the grains of wild, ancient and cultivated wheat species. Cereal Research Communications 29, 375-382.
4. Bänziger M. & Long J. (2000) The potential for inceasing the iron and zinc density of maize through plant breeding. Food and Nutrition Bulletin 21, 397-400.
5. Beebe S., Gonzalez A.V. & Rengifo J. (2000) Research on trace minerals in the common bean. Food and Nutrition Bulletin 21, 387-391.
6. Belouchi A., Kwan T. & Gros P. (1997) Cloning and characterization of the OsNramp family from Oryza sativa, a new family of membrane proteins possibly implicated in the transport of metal ions. Plant Molecular Biology 33, 1085-1092.
7. Bentsink L., Alonso-Blanco C., Vreugdenhil D., Tesnier K.J.Y., Groot S.P.C. & Koornneef M. (2000) Genetic analysis of seed-soluble oligosaccharides in relation to seed storability of Arabidopsis. Plant Physiology 124, 1595-1604.
8. Bentsink L., Yuan K., Koornneef M. & Vreugdenhil D. (2003) The genetics of phytate and phosphate accumulation in seeds and leaves of Arabidopsis thaliana, using natural variation. Theoretical and Applied Genetics 106, 1234-1243.
9. Bonfil D.J. & Kafkafi U. (2000) Wild wheat adaptation in different soil ecosystems as expressed in the mineral concentration of the seeds. Euphytica 114, 123-134.
10. Cakmak I., Ozkan H., Braun H.J., Welch R.M. & Romheld V. (2000) Zinc and iron concentrations in seeds of wild, primitive, and modern wheat. Food and Nutrition Bulletin 21, 401-403.
11. Chen T.S., Toribara T.Y. & Warner U. (1956) Microdetermination of phosphorus. Analytical Chemistry 28, 1756-1758.
12. Clemens S. (2001) Molecular mechanisms of plant metal tolerance and homeostasis. Planta 212, 475-486.
13. Delhaize E., Kataoka T., Hebb D.M., White R.G. & Ryan P.R. (2003) Genes encoding proteins of the cation diffusion facilitator family that confer manganese tolerance. Plant Cell 15, 1131-1142.
14. Dvorak J. (1967) Über die Magnesiumbestimmung in Pflanzenmaterial durch Absorption-Flammenphotometrie. Chemiské Lísty 61, 390-394.
15. El-Assal S.E.-D., Alonso-Blanco C., Peelers A.J.M., Raz V. & Koornneef M. (2001) A QTL for flowering time in Arabidopsis reveals a novel allele of CRY2. Nature Genetics 29, 435-440.
16. Ernst W.H.O. (1974) Schwermetallvegetation der Erde. G. Fischer Verlag, Stuttgart Germany.
17. Ernst W.H.O. & Nelissen H.J.M. (2000) Life-cycle phases of a zinc- and cadmium-resistant ecotype of Silene vulgaris in risk assessment of polymetallic mine soils. Environmental Pollution 107, 329-338.
18. Ernst W.H.O., Nelissen H.J.M. & Ten Bookum W.M. (2000) Combination toxicology of metal-enriched soils: physiological responses of a Zn- and Cd-resistent ecotype of Silene vulgaris on polymetallic soils. Environmental and Experimental Botany 43, 55-71.
19. Ernst W.H.O., Schat H. & Verkleij. J.A.C. (1990) Evolutionary biology of metal resistance in Silene vulgaris. Evolution Trends in Plants 4, 45-51.
20. Gaymard F., Pilot G., Lacombe B., Bouchez D., Bruneau D., Boucherez J., Michaux-Ferriere N., Thibaud J.B. & Sentenac H. (1998) Identification and disruption of a plant shaker-like outward channel involved in K+ release into the xylem sap. Cell 94, 647-655.
21. Graham R., Senadhira D., Beebe S., Iglesias C. & Monasterio I. (1999) Breeding for micronutrient density in edible portions of staple food crops: conventional approaches. Field Crops Research 60, 57-80.
22. Gregorio G.B., Senadhira D., Htut H. & Graham R.D. (2000) Breeding for trace mineral density in rice. Food and Nutrition Bulletin 21, 382-386.
23. Grusak M.A. & DellaPenna D. (1999) Improving the nutrient composition of plants to enhance human nutrition and health. Annual Review of Plant Physiology and Plant Molecular Biology 50, 133-161.
24. Harmens H., Gusmao N.G.C.P.B., Den Hartog P.R., Verkleij J.A.C. & Ernst W.H.O. (1993) Uptake and transport of zinc in zinc-sensitive and zinc-tolerant Silene vulgaris. Journal of Plant Physiology 141, 309-315.
25. Hewitt E.J., Bolle-Jones W.W. & Miles P. (1954) The production of copper, zinc and molybdenum deficiencies in crop plants grown in sand culture with special reference to some effects of water supply and seed reserves. Plant Soil 5, 205-222.
26. Islam F.M.A., Basford K.E., Jara C., Redden R.J. & Beebe S. (2002) Seed compositional and disease resistance differences among gene pools in cultivated common bean. Genetics Resources and Crop Evolution 49, 285-293.
27. Li L., Tutone A.F., Drummond R.S.M., Gardner R.C. & Luan S. (2001) A novel family of magnesium transport genes in Arabidopsis. Plant Cell 13, 2761-2775.
28. 2+-ATPase in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the USA 94, 8579-8584.
29. Lickfett T., Matthäus B., Velasco L. & Möllers C. (1999) Seed yield, oil and phytate concentration in the seeds of two oilseed rape cultivars as affected by different phosphorus supply. European Journal of Agronomy 11, 293-299.
30. Loewus F.A. & Murthy P.P.N. (2000) myo-Inositol metabolism in plants. A review. Plant Science 150, 1-19.
31. Lott J.N.A. & West M.M. (2001) Elements present in mineral nutrient reserves in dry Arabidopsis thaliana seeds of wild type and pho1,pho2, and man1 mutants. Canadian Journal of Botany 79, 1292-1296.
32. Lott J.N.A., Greenwood J.S. & Batten G.D. (1995) Mechanisms and regulation of mineral nutrien storage during seed development. In Seed Development and Germination (eds J. Kigel & G. Galili), pp. 215-235. Marcel Dekker Inc, New York, USA.
33. Mäser P., Thomine S., Schroeder J.I., et al. (2001) Phylogenetic relationships within cation transporter families of Arabidopsis. Plant Physiology 126, 1646-1667.
34. McBride C.B. (1967) Determination of traces of secondary plant nutrients in fertilizers by atomic absorption spectrophotometry. Journal of Association of Official Analytical Chemists 50, 401-407.
35. Mesjasz-Przybylowicz J., Grodzinska K., Przybylowicz W.J., Godzik B. & Szarek-Lukaszewska (1999) Micro-PIXE studies of elemental distribution in seeds of Silene vulgaris from a zinc dump in Olkusz, southern Poland. Nuclear Instruments and Methods in Physics Research B 158, 306-311.
36. Mesjasz-Przybylowicz J., Grodzinska K., Przybylowicz W.J., Godzik B. & Szarek-Lukaszewska (2001) Nuclear microprobe studies of elemental distribution in seeds of Biscutella laevigata L. from zinc wastes in Olkusz, Poland. Nuclear Instruments and Methods in Physics Research B 181, 634-639.
37. Miedema H., Bothwell J.H.F., Brownlee C. & Davies J.M. (2001) Calcium uptake by plant cells - channels and pumps acting in concert. Trends in Plant Science 6, 514-519.
38. Monasterio I. & Graham R.D. (2000) Breeding for trace minerals in wheat. Food and Nutrition Bulletin 21, 392-396.
39. Otegui M.S., Capp R. & Staehelin L.A. (2002) Developing seeds of Arabidopsis store different minerals in two types of vacuoles and in the endoplasmic reticulum. Plant Cell 14, 1311-1327.
40. Paran I. & Zamir D. (2003) Quantitative traits in plants: beyond the QTL. Trends in Genetics 19, 303-306.
41. Petit J.-M., Briat J.-F. & Lobréaux S. (2001) Structure and differential expression of the four members of the Arabidopsis thaliana ferritin gene family. Biochemistry Journal 359, 575-582.
42. Pigliucci M. & Schlichting C.D. (1995) Reaction norms of Arabidopsis (Brassicaceae). III. Response to nutrients in 26 populations from a worldwide collections. American Journal of Botany 82, 1117-1125.
43. Raboy V. (1997) Accumulation and storage of phosphate and minerals. In Cellular and Molecular Biology of Plant Seed Development (eds B.A. Larkins & I.K. Vasil), pp. 441-477. Kluwer Academic Publishers, Dordrecht, The Netherlands.
44. Robinson N.J., Procter C.M., Connolly E.L. & Guerinot M.L. (1999) A ferric-chelate reductase for iron uptake from soils. Nature 397, 694-697.
45. Rogers E.E. & Guerinot M.L. (2002) FRD3, a member of the multidrug and toxin efflux family, controls iron deficiency responses in Arabidopsis. Plant Cell 14, 1787-1799.
46. Rohlf F.J. (2001) Comparative methods for the analysis of continuous variables: geometric interpretations. Evolution 55, 2143-2160.
47. + exchanger. EMBO Journal 18, 3973-3980.
48. Stephan U.W., Schmidke I. & Pich A. (1994) Phloem translocation of Fe, Cu, Mn and Zn in Ricinus seedlings in relation to the concentrations of nicotianamine, an endogenous chelator for divalent metal ions, in different seedling parts. Plant Soil 165, 181-188.
49. Suzuki K., Higuchi K., Nakanishi H., Nishizawa N.K. & Mori S. (1999) Cloning of nicotianamine synthase genes from Arabidopsis thaliana. Soil Science and Plant Nutrition 45, 993-1002.
50. Swarup K., Alonso-Blanco C., Lynn J.R., Michaels S.D., Amasino R.M., Koornneef M. & Millar A.J. (1999) Natural allelic variation identifies new genes in the Arabidopsis circadian system. Plant Journal 20, 67-77.
51. Thomine S., Lelievre F., Debarbieux E., Schroeder J.I. & Barbier-Brygoo H. (2003) AtNRAMP3, a multispecific vacuolar metal transporter involved in plant responses to iron deficiency. Plant Journal 34, 685-695.
52. Thomine S., Wang R., Ward J.M., Crawford N.M. & Schroeder J.I. (2000) Cadmium and iron transport by members of a plant metal transporter family in Arabidopsis with homology to Nramp genes. Proceedings of the National Academy of Sciences of the USA 97, 4991-4996.
53. Tyler G. & Zohlen A. (1998) Plant seeds as mineral nutrient resource for seedlings - A comparison of plants from calcareous and silicate soils. Annals of Botany 81, 455-459.
54. Van Assche F. & Clijsters H. (1986) Inhibition of photosynthesis in Phaseolus vulgaris by treatment with toxic concentrations of zinc: effect on ribulose-1,5-bisphosphate carboxylase/oxygenase. Journal of Plant Physiology 125, 355-360.
55. Van Ooijen J.W., Boer M.P., Jansen R.C. & Maliepaard C. (2000) MAPQTL, Version 4.0: software for the calculation of QTL positions on genetic maps. Plant Research International, Wageningen, The Netherlands (http://www.kyazma.nl).
56. Véry A.-A. & Sentenac H. (2002) Cation channels in the Arabidopsis plasma membrane. Trends in Plant Science 7, 168-175.
57. White P.J., Bowen H.C., Demidchik V., Nichols C. & Davies J.M. (2002) Genes for calcium-permeable channels in the plasma membrane of plant root cells. Biochemica et Biophysica Acta 1564, 299-309.
58. Wintz H., Fox T., Wu Y.-Y., Feng V., Chen W., Chang H.-S., Zhu T. & Vulpe C. (2003) Expression profiles of Arabidopsis thaliana in mineral deficiencies reveal novel transporters involved in metal homeostasis. Journal of Biological Chemistry 278, 47644-47653.