Periodic DNA methylation in maize nucleosomes and demethylation by environmental stress

Journal of Biological Chemistry

Volumn 277, Issue 40, 2002, Pages 37741-37746

  Steward, Nicolas ^a   Ito, Mikako ^a   Yamaguchi, Yube ^a   Koizumi, Nozomu ^a   Sano, Hiroshi ^a,b  

^a NARA INSTITUTE OF SCIENCE AND TECHNOLOGY   (Japan)

^b Recipient of Research Fellowships 00177 from CREST and JSPS   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

COLD STRESS; DEMETHYLATION;

CROPS; DNA; ENVIRONMENTAL IMPACT; GENES; PROTEINS; TISSUE;

BIOCHEMISTRY;

DNA; DNA FRAGMENT; GENOMIC DNA; MICROCOCCAL NUCLEASE; PROTEIN;

ARTICLE; COLD STRESS; CONTROLLED STUDY; DEMETHYLATION; DNA DETERMINATION; DNA METHYLATION; GENE EXPRESSION; GENE MAPPING; GENE SEQUENCE; GENETIC ANALYSIS; GENOME; HEREDITY; INDUCED HYPOTHERMIA; MAIZE; METHYLATION; NONHUMAN; NUCLEOSOME; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; RETROPOSON; STRESS;

ACCLIMATIZATION; BASE SEQUENCE; COLD; DNA METHYLATION; DNA PRIMERS; DNA, PLANT; ENVIRONMENT; GENOME, PLANT; MOLECULAR SEQUENCE DATA; NUCLEOSOMES; PLANT PROTEINS; TRANSCRIPTION, GENETIC; ZEA MAYS;

GENETTA; ZEA MAYS;

EID: 0037020179     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M204050200     Document Type: Article

References (42)

1. Gruenbaum, Y., Naveh-Many, T., Cedar, H., and Razin, A. (1981) Nature 292, 860-862
2. Yoder, J. A., Walsh, C. P., and Bestor, T. H. (1997) Trends Genet. 13, 335-340
3. Colot, V., and Rossignol, J. L. (1999) Bioessays 21, 402-411
4. Bird, A. P., and Wolffe, A. P. (1999) Cell 99, 451-454
5. Robertson, K. D., and Wolffe, A. P. (2000) Nat. Rev. Genet. 1, 11-19
6. Smith, S. S. (2000) J. Mol. Biol. 302, 1-7
7. Jones, P. A., and Takai, D. (2001) Science 293, 1068-1070
8. Jackson-Grusby, L., Beard, C., Possemat, R., Tudoe, M., Fambrough, D., Csankovszki, G., Dausman, J., Lee., P., Wilson, C., and Lander, E., (2001) Nat. Genet. 27, 31-39
9. Bird, A. (2002) Genes Dev. 16, 6-21
10. Reik, W., Dean, W., and Walter, J. (2001) Science 293, 1089-1093
11. Jost, J. P., Oakeley, E. J., Zhu, B., Benjamin, D., Thiry, S., Siegmann, M., and Jost, Y.-C. (2001) Nucleic Acids Res. 29, 4452-4461
12. Riggs, A. D., and Porter, T. N. (1996) in Epigenetic Mechanisms of Gene Regulation (Russo, V. E. A., Martienssen, R. A., and Riggs, A. D., eds) pp. 29-45, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
13. Holliday, R. (1993) in DNA Methylation: Molecular Biology and Biological Significance (Jost, J. P., and Saluz, H. P., eds) pp. 452-468, Birkhauser Verlag, Basel, Switzerland
14. Reik, W., and Walter, J. (2001) Nat. Rev. Genet. 2, 21-32
15. Smith, J. M. (1990) J. Theor. Biol. 143, 41-53
16. Durrant, A. (1962) Heredity 17, 27-61
17. Cullis, C. A. (1983) CRC Crit. Rev. Plant Sci. 1, 117-131
18. Jablonka, E., and Lamb, M. J. (1989) J. Theor. Biol. 139, 69-83
19. Martienssen, R. A., and Colot, V. (2001) Science 293, 1070-1074
20. Sano, H., Kamada, I., Youssefian, S., Katsumi, M., and Wabilko, H. (1990) Mol. Gen. Genet. 220, 441-447
21. Fukui, K., and Iijima, K. (1991) Theor. Appl. Genet. 81, 589-596
22. Ohmido, N., and Fukui, K. (1997) Plant Mol. Biol. 35, 963-968
23. Sano, H., Imokawa, M., and Sager, R. (1988) Biochim. Biophys. Acta 951, 157-165
24. Toyota, M., Ho, C., Ahuja, N., Jair, K. W., Li, Q., Ohe-Toyota, M., Baylin, S. B., and Issa, J. P. (1999) Cancer Res. 59, 2307-2312
25. Verwoerd, T. C., Dekker, B. M., and Hoekema, A. (1989) Nucleic Acids Res. 17, 2362
26. Raizis, A. M., Schmitt, F., and Jost, J. P. (1995) Anal. Biochem. 226, 161-166
27. Yamaguchi, J., Lim, P. Y., Aratani, K., and Akazawa, T. (1992) Cell Struct. Func. 17, 87-92
28. Steward, N., Kusano, T., and Sano, H. (2000) Nucleic Acids Res. 28, 3250-3259
29. Finnegan, E. J., Peacock, W. J., and Dennis, E. S. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 8449-8454
30. Ananiev, E. V., Phillips, R. L., and Rines, H. W. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 10785-10790
31. Davey, C., Pennings, S., and Allan, J. (1997) J. Mol. Biol. 267, 276-288
32. McArthur, M., and Thomas, J. O. (1996) EMBO J. 15, 1705-1714
33. Campoy, F. J., Meehan, R. R., McKay, S., Nixon, J., and Bird, A. (1995) J. Biol. Chem. 270, 26473-26481
34. Godde, J. S., Kass, S. U., Hirst, M. C., and Wolffe, A. P. (1996) J. Biol. Chem. 271, 24325-24328
35. Tamaru, H., and Selker, E. U. (2001) Nature 414, 277-283
36. Zhu, B., Benjamin, D., Zheng, Y., Angliker, H., Thiry, S., Siegmann, M., and Jost, J. P. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 5031-5036
37. Zluvova, J., Janousek, B., and Vyskot, B. (2001) J. Exp. Bot. 52, 2265-2273
38. Thomashow, M. F. (1994) in Arabidopsis (Meyerowitz, E. M., and Somerville C. R., eds) pp. 807-834, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
39. Bennetzen, J. L. (2000) Plant Mol. Biol. 42, 251-269
40. Dennis, E. S., and Brettell, R. I. (1990) Philos. Trans. R. Soc. Lond-Biol. Sci. 362, 217-229
41. Miura, A., Yonebayashi, S., Watanabe, K., Toyama, T., Shimada, H., and Kakutani, T. (2001) Nature 411, 212-214
42. Cubas, P., Vincent, C., and Coen, E. (1999) Nature 401, 157-161