Development of PCR-based markers on chromosome 5H for assisted selection of frost-tolerant genotypes in barley

Molecular Breeding

Volumn 14, Issue 3, 2004, Pages 265-273

  Toth B ^a   Francia, E ^b   Rizza, F ^b   Stanca, A M ^b   Galiba, G ^a   Pecchioni, N ^b  

^a AGRICULTURAL INSTITUTE   (Hungary)

^b I 29017 F   (Italy)

Author keywords

Barley; Chromosome 5H; Frost tolerance; MAS; Molecular markers

Indexed keywords

CLONING; PLANTS (BOTANY);

BARLEY; BARLEY BREEDING; CHROMOSOME 5H; FROST TOLERANCE; FROST TOLERANCE;; MAS; MOLECULAR MARKER; PCR-BASED MARKERS; SOUTHERN EUROPE; STS MARKERS;

CHROMOSOMES;

EMBRYOPHYTA; HORDEUM VULGARE SUBSP. VULGARE; TRITICEAE;

EID: 8744310545     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1023/B:MOLB.0000047774.01769.e6     Document Type: Article

References (27)

1. Arru L., Faccini N., Govoni C., Cattivelli L., Pecchioni N., Delogu G., Stanca A.M. and Valè G. 2003. The PCR-based marker MWG2018 linked to the Rdg2a leaf stripe resistance gene is a useful tool for assessing barley resistance in breeding programs. Crop Science 43: 1036-1042.
2. Barr A.R., Jefferies S.P., Warner P., Moody D.B., Chalmers K.J. and Langridge P. 2000. Marker assisted selection in theory and practice.. In: Logue S. (ed.), Barley Genetics VIII, Vol. I. Invited Papers, pp. 167-178.
3. Butler W.L. and Kitajima M. 1975. Fluorescence quenching in photosystem II of chloroplast. Biochim. Biophys. Acta. 376: 116-125.
4. Cattivelli L., Baldi P., Crosatti C., Di Fonzo N., Faccioli P., Grossi M., Mastrangelo A.M., Pecchioni N. and Stanca A.M. 2002. Chromosome regions and stress-related sequences involved in resistance to abiotic stress in Triticae. Plant Mol. Biol. 48: 649-665.
5. Dubcovsky J. Lijavetzky D. Appendino L. and Tranquilli G. 1998. Comparative RFLP mapping of Triticum monococcum genes controlling vernalization requirement. Theor. Appl. Genet. 97: 968-975.
6. Dubcovsky J. Ramakrishna W. SanMiguel P.J. Busso C.S. Yan L. Shiloff B.A. and Bennetzen J.L. 2001. Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes. Plant Physiol. 125: 1342-1353.
7. Francia E. Rizza F. Cattivelli L. Stanca A.M. Galiba G. Tóth B. Hayes P.M. Skinner J.S. Pecchioni N. 2003. Two loci on chromosome 5H determine low-temperature tolerance in a 'Nure' (winter) x 'Tremois' (spring) barley map. Theor. Appl. Genet. 2003 Oct 24
8. Galiba G., Quarrie S.A., Sutka J., Morgounov A. and Snape J.W. 1995. RFLP mapping of the vernalization (Vrnl) and frost resistance (Frl) genes on chromosome 5A of wheat. Theor. Appl. Genet. 90: 1174-1179.
9. Hayes P.M., Blake T.K., Chen T.H.H., Tragoonrung S., Chen S., Pan A. and Liu B. 1993. Quantitative trait loci on barley (Hordeum vulgare L.) chromosome 7 associated with components of winterhardiness. Genome 36: 66-71.
10. Houde M. Rajinder S.D. and Sarhan F. 1992. A molecular marker to select for freezing tolerance in Gramineae. Mol. Gen. Genet. 234: 43-48.
11. Iwaki K. Nishida J. Yanagisawa T. Yoshida H. and Kato K. 2002. Genetic analysis of Vrn-Bl for vernalization requirement by using linked dCAPS markers in bread wheat (Triticum aestivum L.). Theor. Appl. Genet. 104: 571-576.
12. Kandemir N., Jones B.L., Wesemberg D.M., Ullrich S.E. and Kleinhofs A. 2000. Marker-assisted analysis of three grain yield QTL in barley (Hordeum vulgare L.) using near isogenic lines. Molecular Breeding 6: 157-167.
13. Karsai I., Mészáros K., Lang L., Hayes P.M. and Bedo Z. 2001. Multivariate analysis of traits determining adaptation in cultivated barley. Plant Breeding 120: 217-222.
14. Kleinhofs A., Killian A., Saghai Maroof M.A., Biyashev R.M., Hayes P.M., Chen F.Q., Lapitan N., Fenwick A., Blake T.K., Kanazin V., Ananiev E., Dahleen L., Kudrna D., Bollinger D., Knapp S.J., Liu B. Sorrels M., Heun M., Franckowiak J.D., Hoffmann D., Skadsen R. and Steffenson B.J. 1993. A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome. Theor. Appl. Genet. 86: 705-712.
15. Laurie D.A., Pratchett N., Bezant J. and Snape J.W. 1995. RFLP mapping of five major genes and eight quantitative trait loci controlling flowering time in winter x spring barley (Hordeum vulgare L.) cross. Genome 38: 575-585.
16. Pan A., Hayes P.M., Chen F., Chen H.H.T., Blake T.K., Wright S., Karsai I. and Bedo Z. 1994. Genetic analysis of the components of winterhardiness in barley (Hordeum vulgare L.). Theor. Appl. Genet. 89: 900-910.
17. Pecchioni N., Francia E., Arru L., Baldi P., Cattivelli L., Gianinetti A. and Stanca A.M. 2001. Development of a 'winter' x 'spring' and 'feeding' x 'malting' two-rowed barley map. Plant & Animal Genome IX Conference, San Diego, California, USA, January 13-17.
18. Rizza R, Pagani D., Stanca A.M. and Cattivelli L. 2001. Use of chlorophyll fluorescence to evaluate the cold acclimation and freezing tolerance of winter and spring oats. Plant Breeding. 10: 389-396.
19. Rozen S., Skaletsky H.J. 1998. Primer3. (Available from http://www-genome.wi.mit.edu/genome_software/other/primer3.html)
20. Salvo-Garrido H., Laune D.A., Jaffe B. and Snape J.W. 2001. An RFLP map of diploid Hordeum bulbosum L. and comparison with maps of barley (H. vulgare L.) and wheat (Trincum aestivum L.) Theor. Appl. Genet. 103: 869-880.
21. Snape J.W. Semikhodskii A. Fish L. Sarma R.N. Quarrie S.A. Galiba G. and Sutka J. 1997. Mapping frost resistance loci in wheat and comparative mapping with other cereals. Acta. Agron. Hung. 45: 265-270.
22. Snape J.W., Sarma R., Quarrie S.A., Fish L., Galiba G. and Sutka J. 2001. Mapping genes for flowering time and frost tolerance in cereals using precise genetic stocks. Euphytica. 120: 309-315.
23. Storlie E.W., Allan R.E. and Walker-Simmons M.K. 1998. Effect of the Vrnl-Frl interval on cold hardiness levels in near-isogenic wheat lines. Crop. Sci. 38: 483-488.
24. Sutka J., Galiba G., Vagujfalvi A., Gill B.S. and Snape J.W. 1999. Physical mapping of the Vrn-Al and Frl genes on chromosome 5A of wheat using deletion lines. Theor. Appl. Genet. 99: 199-202.
25. Tóth B., Galiba G. Feher E. Sutka J. Snape J.W. 2003. Mapping genes affecting flowering time and frost resistance on chromosome 5B of wheat. Theor. Appl. Genet. 107(3): 509-514.
26. Vagujfalvi A., Crosatti C., Galiba G., Dubcovsky J. and Cattivelli L. 2000. Two loci on wheat chromosome 5A regulate the differential cold-dependent expression of the cor14b gene in frost-tolerant and frost-sensitive genotypes. Mol. Gen. Genet. 263: 194-200.
27. Vágújfalvi A., Galiba G., Cattivelli L. and Dubcovsky J. 2003. The cold-regulated transcriptional activator Cbf3 is linked to the frost-tolerance locus Fr-A2 on wheat chromosome 5A. Mol Gen. Genom. 269(1): 60-67.