Transposons as tools for functional genomics

Plant Physiology and Biochemistry

Volumn 39, Issue 3-4, 2001, Pages 243-252

  Ramachandran, S ^a   Sundaresan, V ^a  

^a NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

Gene tagging; Reverse genetics; Transposons

Indexed keywords

DATA BASE; GENE FUNCTION; GENETIC TRANSFORMATION; HETEROLOGOUS EXPRESSION; INSERTIONAL MUTAGENESIS; PHENOTYPE; PLANT BIOTECHNOLOGY; PLANT GENETICS; TRANSPOSON;

ANTIRRHINUM MAJUS; ARABIDOPSIS THALIANA;

EID: 0035058382     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0981-9428(01)01243-8     Document Type: Review

References (90)

1. Transposon tagging of a male sterility gene in A. thaliana
2. T-DNA insertion mutagenesis in A. thaliana: Going back and forth
3. Efficient gene tagging in Arabidopsis thaliana using a gene trap approach
4. Phenotypic assay for excision of the maize controlling element Ac in tobacco
5. Transposition of the maize controlling element 'Activator' in tobacco
6. Targeted gene mutation in Drosophila
7. Transposition pattern of the maize element Ds in Arabidopsis thaliana
8. RNA as a target and an initiator of post-transcriptional gene silencing in transgenic plants
9. A tool for functional plant genomics; Chimeric RNA/DNA oligonucleotides cause in vivo gene-specific mutations
10. The Mutator transposable element system of maize
11. The contributions of retroelements to plant genome organization, function and evolution
12. Mobility of the maize transposable element En/Spm in Arabidopsis thaliana
13. Tagging and cloning of a Petunia flower color gene with the maize transposable element Activator
14. Transposable element generates novel spatial patterns of gene expression in Antirrhinum majus
15. Cloning of the bronze locus in maize by a simple and generalizable procedure using the transposable element Activator (Ac)
16. Isolation of the transposable maize controlling elements Ac and Ds
17. Behavior of modified Ac elements in flax callus and regenerated plants
18. Transposon tagging of the sulfur gene of tobacco using engineered maize Ac/Ds elements
19. Tag 1 is an autonomous transposable element that shows somatic excision in both Arabidopsis and tobacco
20. A general method for gene isolation in tagging approaches: Amplification of insertion mutagenized sites (AIMS)
21. The maize Eh-I/Spm element transposes in potato
22. The Arabidopsis dwarf mutant shi exhibits reduced gibberellin responses conferred by overexpression of a new putative zinc finger protein
23. Molecular characterization of a non-autonomous transposable element (dTph I) of Petunia
24. Plant-transposable elements and gene tagging
25. Molecular and function characterization of Slide, an Ac-like autonomous transposable element from tobacco
26. A comparative study of Tam3 and Ac transposition in transgenic tobacco and Petunia plants
27. Activation of a plant gene by T-DNA tagging: Auxin-independent growth in vitro
28. Structural analysis of Tam3, a transposable element from Antirrhinum majus, reveals homologies to the Ac element from maize
29. Retrotransposons of rice: Their regulation and use for genome analysis
30. A role for the AKT1 potassium channel in plant nutrition
31. Regional insertional mutagenesis of genes on Arabidopsis thaliana chromosome V using the Ac/Ds transposon in combination with a cDNA scanning method
32. Transposon tagging in rice
33. Direct tagging of the Arabidopsis Fatty Acid Elongation 1 (FAE1) gene with the maize transposon Activator
34. T-DNA insertional mutagenesis for functional genomics in rice
35. Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging
36. Preferential transposition of the maize element Activator to linked chromosomal locations in tobacco
37. Do unintended antisense transcripts contribute to sense co-suppression in plants?
38. Site selected transposon mutagenesis of Drosophila
39. Targeted disruption in Arabidopsis
40. Transposition of the maize transposable element Ac in Solanum tuberosum
41. Targeted gene inactivation in petunia by PCR-based selection of transposon insertion mutants
42. T-DNA as an insertional mutagen in Arabidopsis
43. Plant transposable elements and functional genomics
44. The L6 gene for flax rust resistance is related to the Arabidopsis bacterial resistance gene RPS2 and the tobacco viral resistant gene N
45. Shatterproof MADS-box genes control seed dispersal in Arabidopsis
46. Tagging genomic sequences that direct transgene expression by activation of a promoter trap in plants
47. Genetic characterization of Mutator system in maize: Behavior and regulation of Mu transposons in a minimal line
48. The Arabidopsis transposon Tag1 is active in rice, undergoing germinal transposition and restricted, late somatic excision
49. Thermal asymmetric interlaced PCR: Automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking
50. Plant tagnology
51. Mobility of the maize suppressor-mutator element in transgenic tobacco cells
52. Mutable loci in maize
53. Mutations in maize and chromosomal aberrations in neurospora
54. Technical advance: A high throughput system for transposon tagging and promoter trapping in tomato
55. Function search in a large transcription factor gene family in Arabidopsis: Assessing the potential of reverse genetics to identify insertional mutations in r2r3 myb genes
56. Identification of Tnr3, a Suppressor-mutator/enhancer-like transposable element from rice
57. Transposition of the maize Activator element in transgenic rice plants
58. The transposable element Tam1 from Antirrhinum majus shows structural homology to the maize transposon En/Spm and has no sequence specificity of insertion
59. Genetic applications of an inverse polymerase chain reaction
60. Functional genomics in Arabidopsis: Large-scale insertional mutagenesis complements the genome sequencing project
61. Analysis of flanking sequences from Dissociation insertion lines: A database for reverse genetics in Arabidopsis
62. Transcriptional behavior of the maize Eh/Spm element in transgenic tobacco
63. Molecular analysis of the En/Spm transposable element system of Zea mays
64. The En mutable system in maize
65. A mutable pale green locus in maize
66. Enhanced frequency of transposition of the maize transposable element Activator following excision from T-DNA in Petunia hybrida
67. Characterization of a mutator system in maize
68. The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering
69. Regional insertional mutagenesis of specific genes on the CIC5F11/CIC2B9 locus of Arabidopsis thaliana chromosome 5 using the Ac/Ds transposon in combination with the cDNA scanning method
70. Trans-activation and stable integration of the maize transposable element Ds cotransfected with the Ac transposase gene in transgenic rice plants
71. Entrapment vectors: A new tool for mammalian genetics
72. Psl: A novel Spm-like transposable element from Petunia hybrida
73. A general method to isolate genes tagged by a high copy number transposable element
74. A two-component enhancer-inhibitor transposon mutagenesis system for functional analysis of the Arabidopsis genome
75. Gene Traps: Tools for plant development and genomics
76. Horizontal spread of transposon mutagenesis: New uses for old elements
77. Patterns of gene actions in plant development revealed by enhancer trap and gene trap transposable elements
78. Multiple independent defective Suppressor-mutator transposon insertions in Arabidopsis: A tool for functional genomics
79. Identification of a mobile endogenous transposon in Arabidopsis thaliana
80. Transposon display identifies individual transposable elements in high copy number lines
81. Studies on the introduction and mobility of the maize Activator element in Arabidopsis thaliana and Daucus carota
82. Alternate splicing induced by insertion of retrotransposons into maize waxy gene
83. Strategies for mutagenesis and gene cloning using transposon tagging and T-DNA insertional mutagenesis
84. Saturation mutagenesis using maize transposons
85. Activation tagging in Arabidopsis
86. The product of the tobacco mosaic virus resistance gene N: Similarity to Toll and the interleukin-1 receptor
87. A Dissociation insertion causes a semidominant mutation that increases expression of TINY, an Arabidopsis gene related to APETALA2
88. The behaviour of the autonomous maize transposable element En/Spm in Arabidopsis thaliana allows efficient mutagenesis
89. Infrequent transposition of Ac in Lettuce, Lactuca sativa
90. Ac transposition in transgenic tomato plants