Large scale analysis of transcripts abundance in barley subjected to several single and combined abiotic stress conditions

Plant Science

Volumn 167, Issue 6, 2004, Pages 1359-1365

  Atienza, Sergio G ^a   Faccioli, Primetta ^a   Perrotta, Gaetano ^b   Dalfino, Giuseppe ^a   Zschiesche, Wiebke ^c   Humbeck, Klaus ^c   Stanca, A Michele ^a   Cattivelli, Luigi ^a  

^a Exp Institute for Cereal Research   (Italy)

^b Trisaia Res Ctr 75026 R   (Italy)

^c MARTIN LUTHER UNIVERSITY HALLE WITTENBERG   (Germany)

Author keywords

Abiotic stress; Barley; Microarray; Stress related genes

Indexed keywords

ABIOTIC STRESS; MICROARRAY; STRESS CONDITIONS; STRESS RESPONSE;

CROPS; DEHYDRATION; DNA; SALINITY MEASUREMENT; STRESSES; TRANSPIRATION;

PLANTS (BOTANY);

DEHYDRATION; FARM CROPS; NUCLEIC ACIDS; PLANTS; SALINITY; STRESSES; TRANSPIRATION;

HORDEUM VULGARE SUBSP. VULGARE;

EID: 4644250562     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2004.07.006     Document Type: Article

References (30)

1. L. Cattivelli, P. Baldi, C. Crosatti, N. Di Fonzo, P. Faccioli, M. Grossi, A.M. Mastrangelo, N. Pecchioni, and A.M. Stanca Chromosome regions and stress-related sequences involved in resistance to abiotic stress in Triticeae Plant Mol. Biol. 48 2002 649 655
2. M. Seki, J. Ishida, M. Narusaka, M. Fujita, T. Nanjo, A.M. Umezawa, M. Nakajima, A. Enju, T. Sakurai, M. Satou, K. Akiyama, K. Yamaguchi-Shinozaki, P. Carninci, J. Kawai, Y. Hayashizaki, and K. Shinozaki Monitoring the expression pattern of around 7,000 Arabidopsis genes under ABA treatments using a full-length cDNA microarray Func. Integr. Genomics 2 2002 282 291
3. W. Wang, B. Vinocur, and A. Altman Plant responses to drought, salinity and extreme temperatures: towards genetic engineering for stress tolerance Planta 218 2003 1 14
4. J.-K. Zhu Plant salt tolerance Trends Plant Sci. 6 2001 66 71
5. G.R. Gray, L.P. Chauvin, F. Sarhan, and N.P.A. Huner Cold acclimation and freezing tolerance - a complex interaction of light and temperature Plant Physiol. 114 1997 467 474
6. Z.N. Ozturk, V. Talamé, M. Deyholos, C.B. Michalowski, D.W. Galbraith, N. Gozukirmizi, R. Tuberosa, and H.J. Bohnert Monitoring large-scale changes in transcript abundance in drought- and salt-stressed barley Plant Mol. Biol. 48 2002 551 573
7. M. Seki, M. Narusaka, H. Abe, M. Kasuga, K. Yamaguchi-Shinozaki, P. Carninci, Y. Hayashizaki, and K. Shinozaki Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses by using a full-length cDNA microarray Plant Cell 13 2001 61 72
8. M. Seki, M. Narusaka, J. Ishida, T. Nanjo, M. Fujita, Y. Oono, A. Kamiya, M. Nakajima, A. Enju, T. Sakurai, M. Satou, K. Akiyama, T. Taji, K. Yamaguchi-Shinozaki, P. Carninci, J. Kawai, Y. Hayashizaki, and K. Shinozaki Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray Plant J. 31 2002 279 292
9. M. Seki, A. Kamei, K. Yamaguchi-Shinozaki, and K. Shinozaki Molecular responses to drought, salinity and frost: common and different paths for plant protection Curr. Opin. Biotechnol. 14 2003 194 199
10. H. Wang, S. Miyazaki, K. Kawai, M. Deyholos, D. Galbraith, and H.J. Bohnert Temporal progression of gene expression responses to salt shock in maize roots Plant Mol. Biol. 52 2003 873 891
11. M.A. Rabbani, K. Maruyama, H. Abe, M.A. Khan, K. Katsura, Y. Ito, K. Yoshiwara, M. Seki, K. Shinozaki, and K. Yamaguchi-Shinozaki Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cDNA microarray and RNA gel-blot analyses Plant Physiol. 133 2003 1755 1767
12. D.-W. Choi, B. Zhu, and T.J. Close The barley (Hordeum vulgare L.) dehydrin multigene family: sequences, allele types, chromosome assignments, and expression characteristics of 11 Dhn genes of cv Dicktoo Theor. Appl. Genet. 98 1999 1234 1247
13. P. Baldi, G. Val, E. Mazzucotelli, C. Govoni, P. Faccioli, A.M. Stanca, and L. Cattivelli The transcripts of several components of the protein synthesis machinery are cold regulated in a chloroplast-dependent manner in barley and wheat J. Plant Physiol. 158 2001 1541 1546
14. P. Faccioli, M.S. Lagonigro, L. De Cecco, A.M. Stanca, R. Alberici, and V. Terzi Analysis of differential expression of barley ESTs during cold acclimatization using microarray technology Plant Biol. 4 2002 630 639
15. C.L. Guy, J.L.A. Huber, and S.C. Huber Sucrose phosphate synthase and sucrose accumulation at low temperature Plant Physiol. 100 1992 502 508
16. C. Frova The plant glutathione transferase gene family: genomic structure, functions, expression and evolution Physiol. Plant. 119 2003 469 479
17. A. Delauney, and P.S. Verma Proline biosynthesis and osmoregulation in plants Plant J. 4 1993 215 223
18. S. Caffarri, R. Croce, L. Cattivelli, and R. Bassi A look within LHCII: differential analysis of the Lhcb 1-3 complexes building the major trimeric antenna complex of higher plant photosynthesis Biochemistry. 43 2004 9467 9476
19. E. Shimosaka, T. Sasanuma, and H. Handa A wheat cold-regulated cDNA encoding an early light-inducible protein (ELIP): its structure, expression and chromosomal location Plant Cell Physiol. 40 1999 319 325
20. D.-W. Choi, E.M. Rodríguez, and T.J. Close Barley Cbf3 gene identification, expression pattern, and map location Plant Physiol. 129 2002 1 7
21. G.P. Xue An AP2 domain transcription factor HvCBF1 activates expression of cold responsive genes in barley through interaction with a (G/a)(C/t)CGAC motif Biochem. Biophys. Acta 1577 2002 63 72
22. E. Francia, F. Rizza, L. Cattivelli, A.M. Stanca, G. Galiba, B. Tóth, P.M. Hayes, J.S. Skinner, and N. Pecchioni Two loci on chromosome 5H determine low temperature tolerance in the new 'winter' x 'spring' ('Nure' x 'Tremois') barley map Theor. Appl. Genet. 108 2004 670 680
23. O. Barth, W. Zschiesche, S. Siersleben, and K. Humbeck Isolation of a novel barley cDNA encoding a nuclear protein involved in stress response and leaf senescence Physiol. Plant. 121 2004 282 293
24. C. Cobbett, and P. Goldsbrough Phytochelatins and metallothioneins: roles in heavy metal detoxification and homeostasis Rev. Plant Biol. 53 2002 159 182
25. S. Pursiheimo, P. Mulo, E. Rintamäki, and E.-M. Aro Coregulation of light-harvesting complex II phosphorylation and lhcb mRNA accumulation in winter rye Plant J. 26 2001 317 327
26. B. Zhu, D.-W. Choi, R. Fenton, and T.J. Close Expression of the barley dehydrin multigene family and the development of freezing tolerance Mol. Gen. Genet. 264 2000 145 153
27. K.K. Niyogi Photoprotection revisited: genetic and molecular approaches Annu. Rev. Plant Physiol. Plant Mol. Biol. 50 1999 333 359
28. B. Zhang, O. Georgiev, M. Hagmann, C. Gunes, M. Cramer, P. Faller, M. Vasak, and W. Schaffner Activity of metal responsive transcription factor-1 (MTF-1) by toxic heavy metals and H2O2 in vitro is modulated by metallothionein Mol. Cell Biol. 23 2003 8471 8485
29. C. Hutin, L. Nussaume, N. Moise, I. Moya, K. Kloppstech, and M. Havaux Early light-induced proteins protect Arabidopsis from photooxidative stress PNAS 100 2003 4921 4926
30. L. Rizhsky, H. Liang, J. Shuman, V. Shulaev, S. Davletova, and R. Mittler When defense pathways collide: the response of Arabidopsis to a combination of drought and heat stress Plant Physiol. 134 2004 1 14