-
1
-
-
0031889780
-
DNA oxidation matters: The HPLC-electrochemical detection assay of 8-oxo-deoxyguanosine and 8-oxo-guanine
-
Ames B.N., Helbock H.J., Beckman K.B., Shigenaga M.K., Walter P.B., Woodall A.A., Yeo H.C. DNA oxidation matters: the HPLC-electrochemical detection assay of 8-oxo-deoxyguanosine and 8-oxo-guanine. Proc. Natl. Acad. Sci. USA. 95:1998;288-293.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 288-293
-
-
Ames, B.N.1
Helbock, H.J.2
Beckman, K.B.3
Shigenaga, M.K.4
Walter, P.B.5
Woodall, A.A.6
Yeo, H.C.7
-
2
-
-
0027493111
-
Endogenous DNA adducts: Potential and paradox
-
Marnett L.J., Burcham P.C. Endogenous DNA adducts: potential and paradox. Chem. Res. Toxicol. 6:1993;771-785.
-
(1993)
Chem. Res. Toxicol.
, vol.6
, pp. 771-785
-
-
Marnett, L.J.1
Burcham, P.C.2
-
5
-
-
0022263018
-
High-resolution structure of a DNA helix containing mismatched base pairs
-
Brown T., Kennard O., Kneale G., Rabinovich D. High-resolution structure of a DNA helix containing mismatched base pairs. Nature. 315:1985;604-606.
-
(1985)
Nature
, vol.315
, pp. 604-606
-
-
Brown, T.1
Kennard, O.2
Kneale, G.3
Rabinovich, D.4
-
6
-
-
0022505062
-
Structure of an adenine-cytosine base pair in DNA and its implications for mismatch repair
-
Hunter W.N., Brown T., Anand N.N., Kennard O. Structure of an adenine-cytosine base pair in DNA and its implications for mismatch repair. Nature. 320:1986;552-555.
-
(1986)
Nature
, vol.320
, pp. 552-555
-
-
Hunter, W.N.1
Brown, T.2
Anand, N.N.3
Kennard, O.4
-
7
-
-
0011178497
-
Molecular structure of the G:A base pair in DNA and its implications for the mechanism of transversion mutations
-
Brown T., Hunter W.N., Kneale G., Kennard O. Molecular structure of the G:A base pair in DNA and its implications for the mechanism of transversion mutations. Proc. Natl. Acad. Sci. USA. 83:1986;2402-2406.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 2402-2406
-
-
Brown, T.1
Hunter, W.N.2
Kneale, G.3
Kennard, O.4
-
8
-
-
0025018374
-
Structural and thermodynamic studies on the adenine guanine mismatch in B-DNA
-
Leonard G.A., Booth E.D., Brown T. Structural and thermodynamic studies on the adenine guanine mismatch in B-DNA. Nucleic Acids Res. 18:1990;5617-5623.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 5617-5623
-
-
Leonard, G.A.1
Booth, E.D.2
Brown, T.3
-
9
-
-
0023628497
-
Helix geometry, hydration, and G:A Mismatch in a B-DNA decamer
-
Prive G.G., Heinemann U., Chandrasegaran S., Kan L.S., Kopka M.L., Dickerson R.E. Helix geometry, hydration, and G:A Mismatch in a B-DNA decamer. Science. 238:1987;498-504.
-
(1987)
Science
, vol.238
, pp. 498-504
-
-
Prive, G.G.1
Heinemann, U.2
Chandrasegaran, S.3
Kan, L.S.4
Kopka, M.L.5
Dickerson, R.E.6
-
10
-
-
0027475856
-
Crystal structure of an oligonucleotide duplex containing G:G base pairs: Influence of mispairing on DNA backbone conformation
-
Skelly J.V., Edwards K.J., Jenkins T.C., Neidle S. Crystal structure of an oligonucleotide duplex containing G:G base pairs: influence of mispairing on DNA backbone conformation. Proc. Natl. Acad. Sci. USA. 90:1993;804-808.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 804-808
-
-
Skelly, J.V.1
Edwards, K.J.2
Jenkins, T.C.3
Neidle, S.4
-
11
-
-
0027930608
-
Crystal structure of a DNA duplex containing 8-hydroxyguanine-adenine base-pairs
-
McAuleyhecht K.E., Leonard G.A., Gibson N.J., Thomson J.B., Watson W.P., Hunter W.N., Brown T. Crystal structure of a DNA duplex containing 8-hydroxyguanine-adenine base-pairs. Biochemistry. 30:1994;10266-10270.
-
(1994)
Biochemistry
, vol.30
, pp. 10266-10270
-
-
McAuleyhecht, K.E.1
Leonard, G.A.2
Gibson, N.J.3
Thomson, J.B.4
Watson, W.P.5
Hunter, W.N.6
Brown, T.7
-
12
-
-
0023657266
-
NMR studies of A:C Mismatches in DNA dodecanucleotides at acidic pH
-
Gao X., Patel D.J. NMR studies of A:C Mismatches in DNA dodecanucleotides at acidic pH. J. Biol. Chem. 262:1987;16973-16984.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 16973-16984
-
-
Gao, X.1
Patel, D.J.2
-
13
-
-
0031228054
-
Rotational correlation times of internuclear vectors in a DNA duplex with G-A mismatch determined in aqueous solution by complete relaxation matrix analysis of off-resonance ROESY (O-ROESY) spectra
-
Kuwata K., Liu H., Schleich T., James T.L. Rotational correlation times of internuclear vectors in a DNA duplex with G-A mismatch determined in aqueous solution by complete relaxation matrix analysis of off-resonance ROESY (O-ROESY) spectra. J. Magn. Res. 128:1997;70-81.
-
(1997)
J. Magn. Res.
, vol.128
, pp. 70-81
-
-
Kuwata, K.1
Liu, H.2
Schleich, T.3
James, T.L.4
-
14
-
-
0030448134
-
Solution structure of two mismatches G:G and I:I in the K-ras gene context by nuclear magnetic resonance and molecular dynamics
-
Faibis V., Cognet J.A.H., Boulard Y., Sowers L.C., Fazakerley G.V. Solution structure of two mismatches G:G and I:I in the K-ras gene context by nuclear magnetic resonance and molecular dynamics. Biochemistry. 35:1996;14452-14464.
-
(1996)
Biochemistry
, vol.35
, pp. 14452-14464
-
-
Faibis, V.1
Cognet, J.A.H.2
Boulard, Y.3
Sowers, L.C.4
Fazakerley, G.V.5
-
15
-
-
0026582206
-
The pH dependent configurations of the C:A mispair in DNA
-
Boulard Y., Cognet J.A.H., Gabarro-Arpa J., LeBret M., Sowers L.C., Fazakerly G.V. The pH dependent configurations of the C:A mispair in DNA. Nucleic Acids Res. 20:1992;1933-1941.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 1933-1941
-
-
Boulard, Y.1
Cognet, J.A.H.2
Gabarro-Arpa, J.3
Lebret, M.4
Sowers, L.C.5
Fazakerly, G.V.6
-
16
-
-
0028933904
-
Solution structure of 2 mismatches A:A and T:T in the K-ras gene context by nuclear magnetic resonance and molecular dynamics
-
Gervais V., Cognet J.A.H., LeBret M., Sowers L.C., Fazakerley G.V. Solution structure of 2 mismatches A:A and T:T in the K-ras gene context by nuclear magnetic resonance and molecular dynamics. Eur. J. Biochem. 228:1995;279-290.
-
(1995)
Eur. J. Biochem.
, vol.228
, pp. 279-290
-
-
Gervais, V.1
Cognet, J.A.H.2
Lebret, M.3
Sowers, L.C.4
Fazakerley, G.V.5
-
17
-
-
0032212134
-
NMR solution structure of a DNA dodecamer containing single GT mismatches
-
Allawi H.T., SantaLucia J. Jr. NMR solution structure of a DNA dodecamer containing single GT mismatches. Nucleic Acids Res. 26:1998;4925-4934.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 4925-4934
-
-
Allawi, H.T.1
Santalucia J., Jr.2
-
18
-
-
0031718788
-
Monofunctional platinum amine complexes destabilize DNA significantly
-
Bauer C., Peleg-Shulman T., Gibson D., Wang A.H.J. Monofunctional platinum amine complexes destabilize DNA significantly. Eur. J. Biochem. 256:1998;253-260.
-
(1998)
Eur. J. Biochem.
, vol.256
, pp. 253-260
-
-
Bauer, C.1
Peleg-Shulman, T.2
Gibson, D.3
Wang, A.H.J.4
-
19
-
-
0032580979
-
NMR solution structure of a DNA dodecamer duplex containing a cis-diammineplatinum(II) d(GpG) intrastrand cross-link, the major adduct of the anticancer drug cisplatin
-
Gelasco A., Lippard S.J. NMR solution structure of a DNA dodecamer duplex containing a cis-diammineplatinum(II) d(GpG) intrastrand cross-link, the major adduct of the anticancer drug cisplatin. Biochemistry. 37:1998;9230-9239.
-
(1998)
Biochemistry
, vol.37
, pp. 9230-9239
-
-
Gelasco, A.1
Lippard, S.J.2
-
21
-
-
0031853742
-
Styrene oxide adducts in an oligodeoxynucleotide containg the human N-ras codon 12: Minor groove structure of the R(12,1)- And S(12,1)-alpha-(N-2-guanyl) stereoisomers deteremined by H-1 nuclear magnetic resonance.
-
Setayesh F.R., DeCorte B.L., Horton P., Harris C.M., Harris T.M., Stone M.P. Styrene oxide adducts in an oligodeoxynucleotide containg the human N-ras codon 12: Minor groove structure of the R(12,1)- and S(12,1)-alpha-(N-2-guanyl) stereoisomers deteremined by H-1 nuclear magnetic resonance. Chem. Res. Toxicol. 11:1998;766-777.
-
(1998)
Chem. Res. Toxicol.
, vol.11
, pp. 766-777
-
-
Setayesh, F.R.1
Decorte, B.L.2
Horton, P.3
Harris, C.M.4
Harris, T.M.5
Stone, M.P.6
-
22
-
-
0032488634
-
Solution structure of the aminofluorene [AF]-intercalated conformer of the syn-[AF]-C-8-dG adduct opposite dC in a DNA duplex
-
Mao B., Hingerty B.E., Broyde S., Patel D.J. Solution structure of the aminofluorene [AF]-intercalated conformer of the syn-[AF]-C-8-dG adduct opposite dC in a DNA duplex. Biochemistry. 37:1998;81-94.
-
(1998)
Biochemistry
, vol.37
, pp. 81-94
-
-
Mao, B.1
Hingerty, B.E.2
Broyde, S.3
Patel, D.J.4
-
23
-
-
0002689224
-
Mismatches and mutagenic lesions in DNA
-
Brown T. Mismatches and mutagenic lesions in DNA. Aldrichimica Acta. 28:1995;15.
-
(1995)
Aldrichimica Acta
, vol.28
, pp. 15
-
-
Brown, T.1
-
25
-
-
0028018955
-
Recognition and repair of 8-oxoguanine and formamidopyrimidine lesions in DNA
-
Grollman A.P., Johnson F., Tchou J.et al. Recognition and repair of 8-oxoguanine and formamidopyrimidine lesions in DNA. Ann. NY Acad. Sci. 726:1994;208-214.
-
(1994)
Ann. NY Acad. Sci.
, vol.726
, pp. 208-214
-
-
Grollman, A.P.1
Johnson, F.2
Tchou, J.3
-
26
-
-
0028863468
-
Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: Structural basis for damaged DNA recognition
-
Vassylyev D.G., Kashiwagi T., Mikami Y., Ariyoshi M., Iwai S., Ohtsuka E., Morikawa K. Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: structural basis for damaged DNA recognition. Cell. 83:1995;773-782.
-
(1995)
Cell
, vol.83
, pp. 773-782
-
-
Vassylyev, D.G.1
Kashiwagi, T.2
Mikami, Y.3
Ariyoshi, M.4
Iwai, S.5
Ohtsuka, E.6
Morikawa, K.7
-
27
-
-
0032985826
-
DNA repair mechanisms for the recognition and removal of damaged DNA bases
-
Mol C.D., Parikh S.S., Putnam C.D., Lo T.P., Tainer J.A. DNA repair mechanisms for the recognition and removal of damaged DNA bases. Annu. Rev. Biophys. Biomol. Struct. 28:1999;101-128.
-
(1999)
Annu. Rev. Biophys. Biomol. Struct.
, vol.28
, pp. 101-128
-
-
Mol, C.D.1
Parikh, S.S.2
Putnam, C.D.3
Lo, T.P.4
Tainer, J.A.5
-
28
-
-
0030787013
-
What structural features determine repair enzyme specificity and mechanism in chemically modified DNA?
-
Singer B., Hang B. What structural features determine repair enzyme specificity and mechanism in chemically modified DNA? Chem. Res. Toxicol. 10:1997;713-732.
-
(1997)
Chem. Res. Toxicol.
, vol.10
, pp. 713-732
-
-
Singer, B.1
Hang, B.2
-
29
-
-
0027997526
-
DNA lesions - A thermodynamic perspective
-
Plum G.E., Breslauer K.J. DNA lesions - a thermodynamic perspective. Ann. NY Acad. Sci. 726:1994;45-56.
-
(1994)
Ann. NY Acad. Sci.
, vol.726
, pp. 45-56
-
-
Plum, G.E.1
Breslauer, K.J.2
-
30
-
-
0033596964
-
Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A:A, C:C, G:G, and T:T mismatches
-
Peyret N., Senevieratne P.A., Allawi H.T., SantaLucia J. Jr. Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A:A, C:C, G:G, and T:T mismatches. Biochemistry. 38:1999;3468-3477.
-
(1999)
Biochemistry
, vol.38
, pp. 3468-3477
-
-
Peyret, N.1
Senevieratne, P.A.2
Allawi, H.T.3
Santalucia J., Jr.4
-
31
-
-
0032212134
-
NMR solution structure of a DNA dodecamer containing single G:T mismatches
-
Allawi H.T., SantaLucia J. Jr. NMR solution structure of a DNA dodecamer containing single G:T mismatches. Nucleic Acids Res. 26:1998;4925-4934.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 4925-4934
-
-
Allawi, H.T.1
Santalucia J., Jr.2
-
32
-
-
0032102940
-
Thermodynamics of internal C:T mismatches in DNA
-
Allawi H.T., SantaLucia J. Jr. Thermodynamics of internal C:T mismatches in DNA. Nucleic Acids Res. 26:1998;2694-2701.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 2694-2701
-
-
Allawi, H.T.1
Santalucia J., Jr.2
-
33
-
-
0032562140
-
Nearest neighbor thermodynamic parameters for internal G-A mismatches in DNA
-
Allawi H.T., SantaLucia J. Jr. Nearest neighbor thermodynamic parameters for internal G-A mismatches in DNA. Biochemistry. 37:1998;2170-2179.
-
(1998)
Biochemistry
, vol.37
, pp. 2170-2179
-
-
Allawi, H.T.1
Santalucia J., Jr.2
-
34
-
-
0032581024
-
Nearest-neighbor thermodynamics of internal A·C mismatches in DNA: Sequence dependence and pH effects
-
Allawi H.T., SantaLucia J. Jr. Nearest-neighbor thermodynamics of internal A·C mismatches in DNA: sequence dependence and pH effects. Biochemistry. 37:1998;9435-9444.
-
(1998)
Biochemistry
, vol.37
, pp. 9435-9444
-
-
Allawi, H.T.1
Santalucia J., Jr.2
-
35
-
-
0032539693
-
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
-
SantaLucia J. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc. Natl. Acad. Sci. USA. 95:1998;1460-1465.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 1460-1465
-
-
Santalucia, J.1
-
36
-
-
0030875847
-
Thermodynamics and NMR of internal G:T mismatches in DNA
-
Allawi H.T., SantaLucia J. Jr. Thermodynamics and NMR of internal G:T mismatches in DNA. Biochemistry. 36:1997;10581-10594.
-
(1997)
Biochemistry
, vol.36
, pp. 10581-10594
-
-
Allawi, H.T.1
Santalucia J., Jr.2
-
37
-
-
0029071401
-
Conformational flexibility in DNA duplexes containing G:G mismatches
-
Lane A.N., Peck B. Conformational flexibility in DNA duplexes containing G:G mismatches. Eur. J. Biochem. 230:1995;1073-1087.
-
(1995)
Eur. J. Biochem.
, vol.230
, pp. 1073-1087
-
-
Lane, A.N.1
Peck, B.2
-
38
-
-
0027304370
-
Characterization of the effects of a thymine glycol residue on the structure, dynamics, and stability of duplex DNA by NMR
-
Kao J.Y., Goljer I., Phan T.A., Bolton P.H. Characterization of the effects of a thymine glycol residue on the structure, dynamics, and stability of duplex DNA by NMR. J. Biol. Chem. 268:1993;17787-17793.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 17787-17793
-
-
Kao, J.Y.1
Goljer, I.2
Phan, T.A.3
Bolton, P.H.4
-
40
-
-
0024400711
-
Endonuclease III is an iron-sulfur protein
-
Cunningham R.P., Asahara H., Bank J.F., Scholes C.P., Salerno J.C., Surerus K., Munck E., McCracken J., Peisach J., Emptage M.H. Endonuclease III is an iron-sulfur protein. Biochemistry. 28:1989;4450-4455.
-
(1989)
Biochemistry
, vol.28
, pp. 4450-4455
-
-
Cunningham, R.P.1
Asahara, H.2
Bank, J.F.3
Scholes, C.P.4
Salerno, J.C.5
Surerus, K.6
Munck, E.7
McCracken, J.8
Peisach, J.9
Emptage, M.H.10
-
41
-
-
0028305721
-
New substrates for old enzymes
-
Hatahet Z., Kow Y.W., Purmal A.A., Cunningham R.P., Wallace S.S. New substrates for old enzymes. J. Biol. Chem. 269:1994;18814-18820.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 18814-18820
-
-
Hatahet, Z.1
Kow, Y.W.2
Purmal, A.A.3
Cunningham, R.P.4
Wallace, S.S.5
-
42
-
-
0023657112
-
Mechanism of action Escherichia coli endonuclease III
-
Kow Y.W., Wallace S.S. Mechanism of action Escherichia coli endonuclease III. Biochemistry. 26:1987;8200-8206.
-
(1987)
Biochemistry
, vol.26
, pp. 8200-8206
-
-
Kow, Y.W.1
Wallace, S.S.2
-
43
-
-
0026703168
-
Escherichia coli MutY protein has both N-glycosylase and apurinic/apyrimidinic endonuclease activities on A-C and A-G mispairs
-
Although believed to be an activity of minor biological significance, it is noteworthy that MutY acts on A:C mispairs
-
Tsai-Wu J.J., Liu H.F., Lu A.-L. Escherichia coli MutY protein has both N-glycosylase and apurinic/apyrimidinic endonuclease activities on A-C and A-G mispairs. Proc. Natl. Acad. Sci. USA. 89:1992;8779-8783. Although believed to be an activity of minor biological significance, it is noteworthy that MutY acts on A:C mispairs.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 8779-8783
-
-
Tsai-Wu, J.J.1
Liu, H.F.2
Lu, A.-L.3
-
44
-
-
0029665878
-
4-methylthymine, or the cisplatin-d(GpG) adduct
-
4-methylthymine, or the cisplatin-d(GpG) adduct. Proc. Natl. Acad. Sci. USA. 93:1996;6443-6447.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 6443-6447
-
-
Duckett, D.R.1
Drummond, J.T.2
Murchi, A.I.3
Reardon, J.T.4
Sancar, A.5
Lilley, D.M.6
Modrich, P.7
-
45
-
-
0028564949
-
Mismatch repair, genetic stablity, and cancer
-
Modrich P. Mismatch repair, genetic stablity, and cancer. Science. 266:1994;1959-1960.
-
(1994)
Science
, vol.266
, pp. 1959-1960
-
-
Modrich, P.1
-
46
-
-
0029943449
-
Mismatch repair in replication fidelity, genetic recombination, and cancer biology
-
Modrich P., Lahue R. Mismatch repair in replication fidelity, genetic recombination, and cancer biology. Annu. Rev. Biochem. 65:1996;101-133.
-
(1996)
Annu. Rev. Biochem.
, vol.65
, pp. 101-133
-
-
Modrich, P.1
Lahue, R.2
-
47
-
-
0028045942
-
DNA glycosylase activities for thymine residues oxidized in the methyl group are functions of the AlkA enzyme in Escherichia coli
-
Bjelland S., Birkeland N.K., Benneche T., Volden G., Seeberg E. DNA glycosylase activities for thymine residues oxidized in the methyl group are functions of the AlkA enzyme in Escherichia coli. J. Biol Chem. 269:1994;30489-30495.
-
(1994)
J. Biol Chem.
, vol.269
, pp. 30489-30495
-
-
Bjelland, S.1
Birkeland, N.K.2
Benneche, T.3
Volden, G.4
Seeberg, E.5
-
48
-
-
0028868463
-
Specific binding of the DNA repair enzyme AlkA to a pyrrolidine-based inhibitor
-
Scharer O.D., Ortholand J.-Y., Ganesan A., Ezaz-Nikpay K., Verdine G.L. Specific binding of the DNA repair enzyme AlkA to a pyrrolidine-based inhibitor. J. Am. Chem. Soc. 117:1995;6623-6624.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 6623-6624
-
-
Scharer, O.D.1
Ortholand, J.-Y.2
Ganesan, A.3
Ezaz-Nikpay, K.4
Verdine, G.L.5
-
50
-
-
0032518911
-
Release of normal bases from intact DNA by a native DNA repair enzyme
-
It is noteworthy that AlkA cleaves not only damaged nucleobases, but also releases undamaged native bases at a low background level
-
Berdal K.G., Johansen R.F., Seeberg E. Release of normal bases from intact DNA by a native DNA repair enzyme. EMBO J. 17:1998;363-367. It is noteworthy that AlkA cleaves not only damaged nucleobases, but also releases undamaged native bases at a low background level.
-
(1998)
EMBO J.
, vol.17
, pp. 363-367
-
-
Berdal, K.G.1
Johansen, R.F.2
Seeberg, E.3
-
51
-
-
0027440878
-
Repair of DNA methylphosphotriesters through a metalloactivated cysteine nucleophile
-
Myers L.C., Terranova M.P., Ferentz A.E., Wagner G., Verdine G.L. Repair of DNA methylphosphotriesters through a metalloactivated cysteine nucleophile. Science. 261:1993;1164-1167.
-
(1993)
Science
, vol.261
, pp. 1164-1167
-
-
Myers, L.C.1
Terranova, M.P.2
Ferentz, A.E.3
Wagner, G.4
Verdine, G.L.5
-
52
-
-
0028898325
-
Metal dependence of transcriptional switching in Escherichia coli Ada
-
Myers L.C., Jackow F., Verdine G.L. Metal dependence of transcriptional switching in Escherichia coli Ada. J. Biol. Chem. 270:1995;6664-6670.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 6664-6670
-
-
Myers, L.C.1
Jackow, F.2
Verdine, G.L.3
-
55
-
-
0031667109
-
Structures of HhaI methyltransferase complexed with substrates containing mismatches at the target base
-
O'Gara M., Horton J.R., Roberts R.J., Cheng X. Structures of HhaI methyltransferase complexed with substrates containing mismatches at the target base. Nature Struct. Biol. 5:1998;872-877.
-
(1998)
Nature Struct. Biol.
, vol.5
, pp. 872-877
-
-
O'Gara, M.1
Horton, J.R.2
Roberts, R.J.3
Cheng, X.4
-
56
-
-
0028010888
-
HhaI methyltransferase flips its target base out of the DNA helix
-
Klimasauskas S., Kumar S., Roberts R.J., Cheng X. HhaI methyltransferase flips its target base out of the DNA helix. Cell. 76:1994;357-369.
-
(1994)
Cell
, vol.76
, pp. 357-369
-
-
Klimasauskas, S.1
Kumar, S.2
Roberts, R.J.3
Cheng, X.4
-
57
-
-
0029068629
-
The crystal structure of HaeIII methyltransferase covalently complexed to DNA: An extrahelical cytosine and rearranged base pairing
-
Reinisch K.M., Chen L., Verdine G.L., Lipscomb W.N. The crystal structure of HaeIII methyltransferase covalently complexed to DNA: an extrahelical cytosine and rearranged base pairing. Cell. 82:1995;143-153.
-
(1995)
Cell
, vol.82
, pp. 143-153
-
-
Reinisch, K.M.1
Chen, L.2
Verdine, G.L.3
Lipscomb, W.N.4
-
58
-
-
0030585418
-
Finding a basis for flipping bases
-
Cheng X., Blumenthal R.M. Finding a basis for flipping bases. Structure. 4:1996;639-645.
-
(1996)
Structure
, vol.4
, pp. 639-645
-
-
Cheng, X.1
Blumenthal, R.M.2
-
59
-
-
0030154882
-
Base eversion and shuffling by DNA methyltransferases
-
Nelson H.C.M., Bestor T.H. Base eversion and shuffling by DNA methyltransferases. Chem. Biol. 3:1996;419-423.
-
(1996)
Chem. Biol.
, vol.3
, pp. 419-423
-
-
Nelson, H.C.M.1
Bestor, T.H.2
-
60
-
-
0028013240
-
The flip side of DNA methylation
-
Verdine G.L. The flip side of DNA methylation. Cell. 76:1994;197-200.
-
(1994)
Cell
, vol.76
, pp. 197-200
-
-
Verdine, G.L.1
-
61
-
-
0029068245
-
On base flipping
-
Roberts R.J. On base flipping. Cell. 82:1995;9-12.
-
(1995)
Cell
, vol.82
, pp. 9-12
-
-
Roberts, R.J.1
-
63
-
-
0028959237
-
The structural basis of specific base-excision repair by uracil-DNA glycosylase
-
Savva R., McAuley-Hecht K., Brown T., Pearl L. The structural basis of specific base-excision repair by uracil-DNA glycosylase. Nature. 373:1995;487-493.
-
(1995)
Nature
, vol.373
, pp. 487-493
-
-
Savva, R.1
McAuley-Hecht, K.2
Brown, T.3
Pearl, L.4
-
64
-
-
0029904839
-
A nucleotide-flipping mechanism from the structure of human uracil-DNA glycosylase bound to DNA
-
Slupphaug G., Mol C.D., Kavli B., Arvai A.S., Krokan H.E., Tainer J.A. A nucleotide-flipping mechanism from the structure of human uracil-DNA glycosylase bound to DNA. Nature. 384:1996;87-92.
-
(1996)
Nature
, vol.384
, pp. 87-92
-
-
Slupphaug, G.1
Mol, C.D.2
Kavli, B.3
Arvai, A.S.4
Krokan, H.E.5
Tainer, J.A.6
-
65
-
-
0030589691
-
Precluding uracil from DNA
-
Vassylyev D.G., Morikawa K. Precluding uracil from DNA. Structure. 4:1996;1381-1385.
-
(1996)
Structure
, vol.4
, pp. 1381-1385
-
-
Vassylyev, D.G.1
Morikawa, K.2
-
66
-
-
0028934537
-
Crystal structure and mutational analysis of human Uracil-DNA glycosylase: Structural basis for specificity and catalysis
-
Mol C.D., Arvai A.S., Slupphaug G., Kavli B., Alseth I., Krokan H.E., Tainer J.A. Crystal structure and mutational analysis of human Uracil-DNA glycosylase: structural basis for specificity and catalysis. Cell. 80:1995;869-878.
-
(1995)
Cell
, vol.80
, pp. 869-878
-
-
Mol, C.D.1
Arvai, A.S.2
Slupphaug, G.3
Kavli, B.4
Alseth, I.5
Krokan, H.E.6
Tainer, J.A.7
-
67
-
-
0032538337
-
Crystal structure of a human alkylbase-DNA repair enzyme complexed to DNA: Mechanisms for nucleotide flipping and base excision
-
Lau A.Y., Scharer O.D., Samson L., Verdine G.L., Ellenberger E. Crystal structure of a human alkylbase-DNA repair enzyme complexed to DNA: mechanisms for nucleotide flipping and base excision. Cell. 95:1998;249-258.
-
(1998)
Cell
, vol.95
, pp. 249-258
-
-
Lau, A.Y.1
Scharer, O.D.2
Samson, L.3
Verdine, G.L.4
Ellenberger, E.5
-
68
-
-
0029836886
-
Specific recognition of substrate analogs by the DNA mismatch repair enzyme MutY
-
Porello S.L., Williams S.D., Kuhn H., Michaels M.L., David S.S. Specific recognition of substrate analogs by the DNA mismatch repair enzyme MutY. J. Am. Chem. Soc. 118:1996;10684-10692.
-
(1996)
J. Am. Chem. Soc.
, vol.118
, pp. 10684-10692
-
-
Porello, S.L.1
Williams, S.D.2
Kuhn, H.3
Michaels, M.L.4
David, S.S.5
-
69
-
-
0029800969
-
Substrate specificity of escherichia coli MutY protein
-
Bulychev N.V., Varaprasad C.V., Dorman G., Miller J.H., Eisenberg M., Grollman A.P., Johnson F. Substrate specificity of escherichia coli MutY protein. Biochemistry. 35:1996;13147-13156.
-
(1996)
Biochemistry
, vol.35
, pp. 13147-13156
-
-
Bulychev, N.V.1
Varaprasad, C.V.2
Dorman, G.3
Miller, J.H.4
Eisenberg, M.5
Grollman, A.P.6
Johnson, F.7
-
70
-
-
0030987556
-
Cloning, overexpression, and biochemical characterization of the catalytic domain of MutY
-
Manuel R.C., Lloyd R.S. Cloning, overexpression, and biochemical characterization of the catalytic domain of MutY. Biochemistry. 36:1997;11140-11152.
-
(1997)
Biochemistry
, vol.36
, pp. 11140-11152
-
-
Manuel, R.C.1
Lloyd, R.S.2
-
71
-
-
0031790423
-
Thermodynamic analysis of biomolecules: A volumetric approach
-
Chalikian T.V., Breslauer K.J. Thermodynamic analysis of biomolecules: a volumetric approach. Curr. Opin. Struc. Biol. 8:1998;657-664.
-
(1998)
Curr. Opin. Struc. Biol.
, vol.8
, pp. 657-664
-
-
Chalikian, T.V.1
Breslauer, K.J.2
-
72
-
-
0030723714
-
The DNA damage-recognition problem in human and other eukaryotic cells: The XPA damage binding protein
-
Cleaver J.E., States J.C. The DNA damage-recognition problem in human and other eukaryotic cells: the XPA damage binding protein. Biochem. J. 328:1997;1-12.
-
(1997)
Biochem. J.
, vol.328
, pp. 1-12
-
-
Cleaver, J.E.1
States, J.C.2
-
73
-
-
0031149139
-
How do DNA repair proteins locate damaged bases in the genome?
-
Verdine G.L., Bruner S.D. How do DNA repair proteins locate damaged bases in the genome? Chem. Biol. 4:1997;329-334.
-
(1997)
Chem. Biol.
, vol.4
, pp. 329-334
-
-
Verdine, G.L.1
Bruner, S.D.2
-
74
-
-
0032498302
-
Crystal structure of a G:T/U mismatch-specific DNA glycosylase: Mismatch recognition by complementary-strand interactions
-
Barrett T.E., Savva R., Panayotou G., Barlow T., Brown T., Pearl L.H. Crystal structure of a G:T/U mismatch-specific DNA glycosylase: mismatch recognition by complementary-strand interactions. Cell. 92:1998;117-129.
-
(1998)
Cell
, vol.92
, pp. 117-129
-
-
Barrett, T.E.1
Savva, R.2
Panayotou, G.3
Barlow, T.4
Brown, T.5
Pearl, L.H.6
-
75
-
-
33646965265
-
Recognition and Reaction of Metallointercalators with DNA
-
Erkkila K.E., Odom D.T., Barton J.K. Recognition and Reaction of Metallointercalators with DNA. Chem. Rev. 99:1999;2777.
-
(1999)
Chem. Rev.
, vol.99
, pp. 2777
-
-
Erkkila, K.E.1
Odom, D.T.2
Barton, J.K.3
-
77
-
-
0032558146
-
Solution structure of a metallointercalator bound site-specifically to DNA
-
Hudson B.P., Barton J.K. Solution structure of a metallointercalator bound site-specifically to DNA. J. Am. Chem. Soc. 120:1998;6877-6888.
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 6877-6888
-
-
Hudson, B.P.1
Barton, J.K.2
-
78
-
-
0342362822
-
-
submitted for publication
-
C.L. Kielkopf, K.E. Erkkila, B.P. Hudson, J.K. Barton, D.C. Rees, Crystal Structure of a Photoexcitable Rhodium Intercalator Bound to a DNA Double Helix submitted for publication, 1999.
-
(1999)
Crystal Structure of a Photoexcitable Rhodium Intercalator Bound to a DNa Double Helix
-
-
Kielkopf, C.L.1
Erkkila, K.E.2
Hudson, B.P.3
Barton, J.K.4
Rees, D.C.5
-
79
-
-
11944275553
-
DNA photocleavage by phenanthrenequinone diimine complexes of Rhodium(III): Shape-selective recognition and reaction
-
Sitlani A., Long E.C., Pyle A.M. DNA photocleavage by phenanthrenequinone diimine complexes of Rhodium(III): shape-selective recognition and reaction. J. Am. Chem. Soc. 114:1992;2303-2312.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 2303-2312
-
-
Sitlani, A.1
Long, E.C.2
Pyle, A.M.3
-
80
-
-
11544314893
-
Oxidative strand scission of nucleic acids: Routes initiated by hydrogen abstraction from the sugar moiety
-
For a nice review of these and other strand cleavage mechanisms
-
Pgozelski W.K., Tullius T.D. Oxidative strand scission of nucleic acids: routes initiated by hydrogen abstraction from the sugar moiety. Chem. Rev. 98:1998;1089-1107. For a nice review of these and other strand cleavage mechanisms.
-
(1998)
Chem. Rev.
, vol.98
, pp. 1089-1107
-
-
Pgozelski, W.K.1
Tullius, T.D.2
-
81
-
-
0027880326
-
Enantiospecific palindromic recognition of 5′-d(CTCTAGAG)-3′ by a novel rhodium intercalator: Analogies to a DNA-binding protein
-
Sitlani A., Dupureur C.M., Barton J.K. Enantiospecific palindromic recognition of 5′-d(CTCTAGAG)-3′ by a novel rhodium intercalator: analogies to a DNA-binding protein. J. Am. Chem. Soc. 115:1993;12589-12590.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 12589-12590
-
-
Sitlani, A.1
Dupureur, C.M.2
Barton, J.K.3
-
82
-
-
0033586725
-
Site-specific inhibition of transcription factor binding to DNA by a metallointercalator
-
Odom D.T., Parker C.S., Barton J.K. Site-specific inhibition of transcription factor binding to DNA by a metallointercalator. Biochemistry. 38:1999;5155-5163.
-
(1999)
Biochemistry
, vol.38
, pp. 5155-5163
-
-
Odom, D.T.1
Parker, C.S.2
Barton, J.K.3
-
83
-
-
0040684389
-
A versatile synthetic approach to Rhodium(III) diimine metallointercalators: Condensation of ortho-Quinones with coordinated cis-Ammines
-
Murner H., Jackson B.A., Barton J.K. A versatile synthetic approach to Rhodium(III) diimine metallointercalators: condensation of ortho-Quinones with coordinated cis-Ammines. Inorg. Chem. 37:1998;3007-3012.
-
(1998)
Inorg. Chem.
, vol.37
, pp. 3007-3012
-
-
Murner, H.1
Jackson, B.A.2
Barton, J.K.3
-
84
-
-
0001337642
-
Recognition of DNA base mismatches by a rhodium intercalator
-
Jackson B.A., Barton J.K. Recognition of DNA base mismatches by a rhodium intercalator. J. Am. Chem. Soc. 119:1997;12986-12987.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 12986-12987
-
-
Jackson, B.A.1
Barton, J.K.2
-
85
-
-
17144436591
-
A versatile mismatch recognition agent: Specific cleavage of a plasmid DNA at a single base mispair
-
Jackson B.A., Alekseyev V.Y., Barton J.K. A versatile mismatch recognition agent: specific cleavage of a plasmid DNA at a single base mispair. Biochemistry. 38:1999;4655-4662.
-
(1999)
Biochemistry
, vol.38
, pp. 4655-4662
-
-
Jackson, B.A.1
Alekseyev, V.Y.2
Barton, J.K.3
-
86
-
-
0030570818
-
A carboxy terminal domain of the hMSH-2 gene product is sufficient for binding specific mismatched oligonucleotides
-
Whitehouse A., Taylor G.R., Deeble J., Phillips S.E.V., Meredith D.M., Markham A.F. A carboxy terminal domain of the hMSH-2 gene product is sufficient for binding specific mismatched oligonucleotides. Biochem. Biophys. Res. Commun. 225:1996;289-295.
-
(1996)
Biochem. Biophys. Res. Commun.
, vol.225
, pp. 289-295
-
-
Whitehouse, A.1
Taylor, G.R.2
Deeble, J.3
Phillips, S.E.V.4
Meredith, D.M.5
Markham, A.F.6
-
87
-
-
0031589177
-
Analysis of the mismatch and insertion/deletion binding properties of thermus thermophilus, HB8, MutS
-
Whitehouse A., Deeble J., Parmar R., Taylor G.R., Markham A.F., Meredith D.M. Analysis of the mismatch and insertion/deletion binding properties of thermus thermophilus, HB8, MutS. Biochem. Biophys. Res. Commun. 233:1997;834-837.
-
(1997)
Biochem. Biophys. Res. Commun.
, vol.233
, pp. 834-837
-
-
Whitehouse, A.1
Deeble, J.2
Parmar, R.3
Taylor, G.R.4
Markham, A.F.5
Meredith, D.M.6
-
88
-
-
0024287626
-
Mispair specificity of methyl-directed DNA mismatch correction in vitro
-
Su S.S., Lahue R.S., Au K.G., Modrich P. Mispair specificity of methyl-directed DNA mismatch correction in vitro. J. Biol. Chem. 263:1988;6829-6835.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 6829-6835
-
-
Su, S.S.1
Lahue, R.S.2
Au, K.G.3
Modrich, P.4
-
89
-
-
33748886713
-
Organic and organometallic molecular magnetic materials: Designer magnets
-
Miller J.S., Epstein A.J. Organic and organometallic molecular magnetic materials: designer magnets. Angew Chem. Int. Ed. Engl. 33:1994;385-415.
-
(1994)
Angew Chem. Int. Ed. Engl.
, vol.33
, pp. 385-415
-
-
Miller, J.S.1
Epstein, A.J.2
-
90
-
-
84991985923
-
Electron-transfer: A critical link between subdisciplines in chemistry
-
Fox M.A. Electron-transfer: a critical link between subdisciplines in chemistry. Chem. Rev. 92:1992;365-368.
-
(1992)
Chem. Rev.
, vol.92
, pp. 365-368
-
-
Fox, M.A.1
-
91
-
-
0028550634
-
Conducting stacked metallophthalocyanines and related compounds
-
Hanack M., Lang M. Conducting stacked metallophthalocyanines and related compounds. Adv. Mater. 6:1994;819-833.
-
(1994)
Adv. Mater.
, vol.6
, pp. 819-833
-
-
Hanack, M.1
Lang, M.2
-
93
-
-
0032604158
-
Radical migration through the DNA helix: Chemistry at a distance
-
Kelley S.O., Barton J.K. Radical migration through the DNA helix: chemistry at a distance. Metal Ions in Biological Systems. 26:1998;211.
-
(1998)
Metal Ions in Biological Systems
, vol.26
, pp. 211
-
-
Kelley, S.O.1
Barton, J.K.2
-
94
-
-
0001629084
-
DNA-mediated electron transfer: Chemistry at a distance
-
Barton J.K. DNA-mediated electron transfer: chemistry at a distance. Pure Appl. Chem. 70:1998;873-879.
-
(1998)
Pure Appl. Chem.
, vol.70
, pp. 873-879
-
-
Barton, J.K.1
-
95
-
-
0033065078
-
Femtosecond dynamics of DNA-mediated electron transfer
-
Wan C., Fiebig T., Kelley S.O., Treadway C.R., Barton J.K., Zewail A.H. Femtosecond dynamics of DNA-mediated electron transfer. Proc. Natl. Acad. Sci. USA. 96:1999;6014-6019.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 6014-6019
-
-
Wan, C.1
Fiebig, T.2
Kelley, S.O.3
Treadway, C.R.4
Barton, J.K.5
Zewail, A.H.6
-
96
-
-
0033079847
-
Long range oxidative damage to DNA: Effects of distance and sequence
-
Nunez M.E., Hall D.B., Barton J.K. Long range oxidative damage to DNA: effects of distance and sequence. Chem. Biol. 6:1999;85.
-
(1999)
Chem. Biol.
, vol.6
, pp. 85
-
-
Nunez, M.E.1
Hall, D.B.2
Barton, J.K.3
-
97
-
-
0028227948
-
Fast photoinduced electron transfer through DNA intercalation
-
Murphy C.J., Arkin M.R., Ghatlia N.D., Bossmann S.H., Turro N.J., Barton J.K. Fast photoinduced electron transfer through DNA intercalation. Proc. Natl. Acad. Sci. USA. 91:1994;5315-5319.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 5315-5319
-
-
Murphy, C.J.1
Arkin, M.R.2
Ghatlia, N.D.3
Bossmann, S.H.4
Turro, N.J.5
Barton, J.K.6
-
98
-
-
0027769742
-
Long range photoinduced electron transfer through a DNA helix
-
Murphy C.J., Arkin M.R., Jenkins Y., Ghatlia N.D., Bossmann S., Turro N.J., Barton J.K. Long range photoinduced electron transfer through a DNA helix. Science. 262:1993;1025-1029.
-
(1993)
Science
, vol.262
, pp. 1025-1029
-
-
Murphy, C.J.1
Arkin, M.R.2
Jenkins, Y.3
Ghatlia, N.D.4
Bossmann, S.5
Turro, N.J.6
Barton, J.K.7
-
99
-
-
0033555454
-
Electron transfer between bases in double helical DNA
-
Kelley S.O., Barton J.K. Electron transfer between bases in double helical DNA. Science. 283:1999;375-381.
-
(1999)
Science
, vol.283
, pp. 375-381
-
-
Kelley, S.O.1
Barton, J.K.2
-
101
-
-
0024456523
-
Structure and dynamics of a fluorescent DNA oligomer containing the EcoRI recognition sequence: Fluorescence, molecular dynamics, and NMR studies
-
Nordlund T.M., Andersson S., Nilsson L., Rigler R., Graslund A., McLaughlin L.W. Structure and dynamics of a fluorescent DNA oligomer containing the EcoRI recognition sequence: fluorescence, molecular dynamics, and NMR studies. Biochemistry. 28:1989;9095-9103.
-
(1989)
Biochemistry
, vol.28
, pp. 9095-9103
-
-
Nordlund, T.M.1
Andersson, S.2
Nilsson, L.3
Rigler, R.4
Graslund, A.5
McLaughlin, L.W.6
-
102
-
-
0030665685
-
Photoinduced electron transfer in ethidium-modified DNA duplexes: Dependence on distance and base stacking
-
Kelley S.O., Holmlin R.E., Stemp E.D.A., Barton J.K. Photoinduced electron transfer in ethidium-modified DNA duplexes: dependence on distance and base stacking. J. Am. Chem. Soc. 119:1997;9861-9870.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 9861-9870
-
-
Kelley, S.O.1
Holmlin, R.E.2
Stemp, E.D.A.3
Barton, J.K.4
-
103
-
-
0032146044
-
DNA-mediated electron transfer from a modified base to ethidium: Stacking as a modulator of reactivity
-
Kelley S.O., Barton J.K. DNA-mediated electron transfer from a modified base to ethidium: stacking as a modulator of reactivity. Chem. Biol. 5:1998;413-425.
-
(1998)
Chem. Biol.
, vol.5
, pp. 413-425
-
-
Kelley, S.O.1
Barton, J.K.2
-
104
-
-
0343667987
-
Nucleic acids as a basis for creation of biosensors
-
Evdokimov Y.M., Skuridin S.G., Salyanov V.I., Semeikin A.S., Palumbo M. Nucleic acids as a basis for creation of biosensors. Mol. Biol. 23:1989;1245-1251.
-
(1989)
Mol. Biol.
, vol.23
, pp. 1245-1251
-
-
Evdokimov, Y.M.1
Skuridin, S.G.2
Salyanov, V.I.3
Semeikin, A.S.4
Palumbo, M.5
-
105
-
-
0027917645
-
Molecular biology techniques
-
Skogerboe K.J. Molecular biology techniques. Clinical Chemistry. 65:1993;416R-419R.
-
(1993)
Clinical Chemistry
, vol.65
-
-
Skogerboe, K.J.1
-
107
-
-
0030763933
-
DNA electrochemical biosensors for environmental monitoring. A review
-
Wang J., Rivas G., Cai X., Palecek E., Nielsen P., Shiraishi H., Dontha N., Luo D., Parrado C., Chicharro M., Farias P.A.M., Valera F.S., Grant D.H., Ozsoz M., Flair M.N. DNA electrochemical biosensors for environmental monitoring. A review. Analytica Chimica Acta. 347:1997;1-8.
-
(1997)
Analytica Chimica Acta
, vol.347
, pp. 1-8
-
-
Wang, J.1
Rivas, G.2
Cai, X.3
Palecek, E.4
Nielsen, P.5
Shiraishi, H.6
Dontha, N.7
Luo, D.8
Parrado, C.9
Chicharro, M.10
Farias, P.A.M.11
Valera, F.S.12
Grant, D.H.13
Ozsoz, M.14
Flair, M.N.15
-
108
-
-
0030756573
-
Nucleic-acid immobilization, recognition and detection at chronopotentiometric DNA chips
-
Wang J., Cai X., Rivas G., Shiraishi H., Dontha N. Nucleic-acid immobilization, recognition and detection at chronopotentiometric DNA chips. Biosensors and Bioelectronics. 12:1997;587-599.
-
(1997)
Biosensors and Bioelectronics
, vol.12
, pp. 587-599
-
-
Wang, J.1
Cai, X.2
Rivas, G.3
Shiraishi, H.4
Dontha, N.5
-
109
-
-
0033054161
-
Towards genoelectronics: Electrochemical biosensing of DNA hybridization
-
Wang J. Towards genoelectronics: electrochemical biosensing of DNA hybridization. Chem. Eur. J. 5:1999;1681-1685.
-
(1999)
Chem. Eur. J.
, vol.5
, pp. 1681-1685
-
-
Wang, J.1
-
111
-
-
0032202243
-
Orienting DNA helices on gold using applied electric fields
-
Kelley S.O., Barton J.K., Jackson N.M., McPherson L.D., Potter A.B., Spain E.M., Allen M.J., Hill G. Orienting DNA helices on gold using applied electric fields. Langmuir. 14:1998;6781-6784.
-
(1998)
Langmuir
, vol.14
, pp. 6781-6784
-
-
Kelley, S.O.1
Barton, J.K.2
Jackson, N.M.3
McPherson, L.D.4
Potter, A.B.5
Spain, E.M.6
Allen, M.J.7
Hill, G.8
-
113
-
-
0025869558
-
Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-ray diffraction studies
-
Wang A.H.-J., Gao Y.-G., Liaw Y.-C., Li Y.-K. Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-ray diffraction studies. Biochemistry. 30:1991;3812-3815.
-
(1991)
Biochemistry
, vol.30
, pp. 3812-3815
-
-
Wang, A.H.-J.1
Gao, Y.-G.2
Liaw, Y.-C.3
Li, Y.-K.4
-
114
-
-
0033572711
-
Single-Base Mismatch Detection Based on Charge Transduction Through DNA
-
in press
-
S.O. Kelley, E.M. Boon, N.M. Jackson, M.G. Hill, J.K. Barton, Single-Base Mismatch Detection Based on Charge Transduction Through DNA, Nuc. Acids Res. (1999) in press.
-
(1999)
Nuc. Acids Res.
-
-
Kelley, S.O.1
Boon, E.M.2
Jackson, N.M.3
Hill, M.G.4
Barton, J.K.5
-
115
-
-
0029833916
-
Oxidative DNA damage through long range electron transfer
-
Hall D.B., Holmlin R.E., Barton J.K. Oxidative DNA damage through long range electron transfer. Nature. 382:1996;731-735.
-
(1996)
Nature
, vol.382
, pp. 731-735
-
-
Hall, D.B.1
Holmlin, R.E.2
Barton, J.K.3
-
116
-
-
1842330888
-
Oxidative thymine dimer repair in the DNA helix
-
Dandliker P.J., Holmlin R.E., Barton J.K. Oxidative thymine dimer repair in the DNA helix. Science. 275:1997;1465-1468.
-
(1997)
Science
, vol.275
, pp. 1465-1468
-
-
Dandliker, P.J.1
Holmlin, R.E.2
Barton, J.K.3
-
117
-
-
4243545125
-
Oxidative nucleobase modifications leading to strand scission
-
Burrows C.J., Muller J.G. Oxidative nucleobase modifications leading to strand scission. Chem. Rev. 98:1998;1109-1151.
-
(1998)
Chem. Rev.
, vol.98
, pp. 1109-1151
-
-
Burrows, C.J.1
Muller, J.G.2
-
119
-
-
0029773892
-
Theoretical Studies of GC-specific photocleavage of DNA via electron Transfer: Significant Lowering of ionization potential and 5′-localization HOMO of stacked GG bases in B-form DNA
-
Sugiyama H., Saito I. Theoretical Studies of GC-specific photocleavage of DNA via electron Transfer: significant Lowering of ionization potential and 5′-localization HOMO of stacked GG bases in B-form DNA. J. Am. Chem. Soc. 118:1996;7063-7068.
-
(1996)
J. Am. Chem. Soc.
, vol.118
, pp. 7063-7068
-
-
Sugiyama, H.1
Saito, I.2
-
120
-
-
0032578191
-
Product analysis of GG-specific photooxidation of DNA via electron transfer: 2-aminoimidazolone as a major guanine oxidation product
-
Kino K., Saito I., Sugiyama H. Product analysis of GG-specific photooxidation of DNA via electron transfer: 2-aminoimidazolone as a major guanine oxidation product. J. Am. Chem. Soc. 120:1998;7373-7374.
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 7373-7374
-
-
Kino, K.1
Saito, I.2
Sugiyama, H.3
-
121
-
-
0032501424
-
Mapping of the hot spots for DNA damage by one-electron oxidation: Efficacy of GG doublets and GGG triplets as a trap in long-range hole migration
-
Saito I., Nakamura T., Nakatani K., Yoshioka Y., Yamaguchi K., Sugiyama H. Mapping of the hot spots for DNA damage by one-electron oxidation: efficacy of GG doublets and GGG triplets as a trap in long-range hole migration. J. Am. Chem. Soc. 120:1998;12686-12687.
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 12686-12687
-
-
Saito, I.1
Nakamura, T.2
Nakatani, K.3
Yoshioka, Y.4
Yamaguchi, K.5
Sugiyama, H.6
-
122
-
-
0031005140
-
Sensitivity of DNA-mediated electron transfer to the intervening stack: A probe for the integrity of the DNA base stack
-
Hall D.B., Barton J.K. Sensitivity of DNA-mediated electron transfer to the intervening stack: a probe for the integrity of the DNA base stack. J. Am. Chem. Soc. 119:1997;5045-5046.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 5045-5046
-
-
Hall, D.B.1
Barton, J.K.2
-
123
-
-
0001824401
-
Structure, motion, interaction and expression of biological macromolecules
-
R.H. Sarma, & M.H. Sarma. Schenectady, NY: Academic Press
-
Dickerson R.E. Structure, motion, interaction and expression of biological macromolecules. Sarma R.H., Sarma M.H. Proceedings of Tenth Conversation in Biomolecular Stereodynamics. 1998;17-36 Academic Press, Schenectady, NY.
-
(1998)
Proceedings of Tenth Conversation in Biomolecular Stereodynamics
, pp. 17-36
-
-
Dickerson, R.E.1
-
126
-
-
0346498266
-
Electron and hydrogen transfer reactions of nucleotides: From Stern-Volmer quenching to nucleoprotein structure
-
Kim J., Sistare M.F., Carter P.J., Thorp H.H. Electron and hydrogen transfer reactions of nucleotides: from Stern-Volmer quenching to nucleoprotein structure. Coord. Chem. Rev. 171:1998;341-349.
-
(1998)
Coord. Chem. Rev.
, vol.171
, pp. 341-349
-
-
Kim, J.1
Sistare, M.F.2
Carter, P.J.3
Thorp, H.H.4
-
127
-
-
0032030750
-
Cutting out the middleman: DNA biosensors based on electrochemical oxidation
-
Thorp H.H. Cutting out the middleman: DNA biosensors based on electrochemical oxidation. Trends Biotech. 16:1998;117-121.
-
(1998)
Trends Biotech.
, vol.16
, pp. 117-121
-
-
Thorp, H.H.1
-
129
-
-
0345627975
-
Oxidative charge transfer to repair thymine dimers and damage guanine bases in DNA assemblies containing tethered metallointercalators
-
Dandliker P.J., Nunez M.E., Barton J.K. Oxidative charge transfer to repair thymine dimers and damage guanine bases in DNA assemblies containing tethered metallointercalators. Biochemistry. 37:1998;6491-6502.
-
(1998)
Biochemistry
, vol.37
, pp. 6491-6502
-
-
Dandliker, P.J.1
Nunez, M.E.2
Barton, J.K.3
-
130
-
-
0000574962
-
Photoenzymes - A novel class of biological catalysts
-
Begley T.P. Photoenzymes - a novel class of biological catalysts. Acc. Chem. Res. 27:1994;394-401.
-
(1994)
Acc. Chem. Res.
, vol.27
, pp. 394-401
-
-
Begley, T.P.1
-
131
-
-
0028117141
-
Structure and function of DNA photolyase
-
Sancar A. Structure and function of DNA photolyase. Biochemistry. 33:1994;2-9.
-
(1994)
Biochemistry
, vol.33
, pp. 2-9
-
-
Sancar, A.1
-
132
-
-
0043215375
-
Photoenzymic repair of UV-damaged DNA - A chemist's perspective
-
Heelis P.F., Hartman R.F., Rose S.D. Photoenzymic repair of UV-damaged DNA - a chemist's perspective. Chem. Soc. Rev. 24:1995;289-297.
-
(1995)
Chem. Soc. Rev.
, vol.24
, pp. 289-297
-
-
Heelis, P.F.1
Hartman, R.F.2
Rose, S.D.3
-
133
-
-
0032997614
-
Functional diversity of the DNA photolyase blue light receptor family
-
Todo T. Functional diversity of the DNA photolyase blue light receptor family. Mut. Res. DNA Repair. 434:1999;89-97.
-
(1999)
Mut. Res. DNA Repair
, vol.434
, pp. 89-97
-
-
Todo, T.1
-
134
-
-
0033538279
-
A model for the enzyme-substrate complex of DNA photolyase and photodamaged DNA
-
Sanders D.B., Wiest O. A model for the enzyme-substrate complex of DNA photolyase and photodamaged DNA. J. Am. Chem. Soc. 121:1999;5127-5134.
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 5127-5134
-
-
Sanders, D.B.1
Wiest, O.2
-
135
-
-
0001473891
-
Chemistry of glycosylases and endonucleases involved in base-excision repair
-
David S.S., Williams S.D. Chemistry of glycosylases and endonucleases involved in base-excision repair. Chem. Rev. 98:1998;1221-1261.
-
(1998)
Chem. Rev.
, vol.98
, pp. 1221-1261
-
-
David, S.S.1
Williams, S.D.2
-
138
-
-
0029790760
-
SoxR, a [2Fe-2S] transcription factor, is active only in its oxidized form
-
Gaudu P., Weiss B. SoxR, a [2Fe-2S] transcription factor, is active only in its oxidized form. Proc. Natl. Acad. Sci. USA. 93:1996;10094-10098.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 10094-10098
-
-
Gaudu, P.1
Weiss, B.2
-
140
-
-
0032457906
-
Oxygen sensing by the global regulator, FNR: The role of the iron-sulfur cluster
-
Kiley P., Beinert H. Oxygen sensing by the global regulator, FNR: the role of the iron-sulfur cluster. FEMS Microbiol. Rev. 22:1998;341-352.
-
(1998)
FEMS Microbiol. Rev.
, vol.22
, pp. 341-352
-
-
Kiley, P.1
Beinert, H.2
-
141
-
-
0028960504
-
Association of a polynuclear iron-sulfur center with a mutant FNR protein enhances DNA-binding
-
Khoroshilova N., Beinert H., Kiley P.J. Association of a polynuclear iron-sulfur center with a mutant FNR protein enhances DNA-binding. Proc. Natl. Acad. Sci. USA. 92:1995;2499-2503.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 2499-2503
-
-
Khoroshilova, N.1
Beinert, H.2
Kiley, P.J.3
-
142
-
-
0032524715
-
Structural requirements for DNA binding of GCM proteins
-
Schreiber J., Enderich J., Wegner M. Structural requirements for DNA binding of GCM proteins. Nucleic Acids Res. 26:1998;2337-2343.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 2337-2343
-
-
Schreiber, J.1
Enderich, J.2
Wegner, M.3
-
143
-
-
0032501151
-
Ref-1 controls Pax-8 DNA-binding activity
-
Tell G., Pellizzari L., Cimarosti D., Pucillo C., Damante G. Ref-1 controls Pax-8 DNA-binding activity. Biochem. Biophys. Res. Commun. 252:1998;178-183.
-
(1998)
Biochem. Biophys. Res. Commun.
, vol.252
, pp. 178-183
-
-
Tell, G.1
Pellizzari, L.2
Cimarosti, D.3
Pucillo, C.4
Damante, G.5
-
144
-
-
0033611583
-
Phosphorylation of the DNA repair protein APE/REF-1 by CK-II affects redox regulation of AP-1
-
Fritz G., Kaina B. Phosphorylation of the DNA repair protein APE/REF-1 by CK-II affects redox regulation of AP-1. Oncogene. 18:1999;1033-1040.
-
(1999)
Oncogene
, vol.18
, pp. 1033-1040
-
-
Fritz, G.1
Kaina, B.2
-
145
-
-
0032481373
-
Effect of guanine stacking on the oxidation of 8-oxoguanine in B-DNA
-
Prat F., Houk K.N., Foote C.S. Effect of guanine stacking on the oxidation of 8-oxoguanine in B-DNA. J. Am. Chem. Soc. 120:1998;845-846.
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 845-846
-
-
Prat, F.1
Houk, K.N.2
Foote, C.S.3
-
146
-
-
0031593021
-
Intramolecular photoinduced electron transfer to anthraquinones linked to duplex DNA: The effect of gaps and traps on long-range radical cation migration
-
Gasper S.M., Schuster G.B. Intramolecular photoinduced electron transfer to anthraquinones linked to duplex DNA: the effect of gaps and traps on long-range radical cation migration. J. Am. Chem. Soc. 119:1997;12762-12771.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 12762-12771
-
-
Gasper, S.M.1
Schuster, G.B.2
|