Single-base mismatch detection based on charge transduction through DNA

Nucleic Acids Research

Volumn 27, Issue 24, 1999, Pages 4830-4837

  Kelley, Shana O ^b   Boon, Elizabeth M ^b   Barton, Jacqueline K ^b   Jackson, Nicole M ^a   Hill, Michael G ^a  

^a OCCIDENTAL COLLEGE   (United States)

^b California Institute of Technology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; GOLD; INTERCALATING AGENT; OLIGONUCLEOTIDE;

ARTICLE; BASE MISPAIRING; DNA HELIX; DNA HYBRIDIZATION; DNA SEQUENCE; DNA STRUCTURE; ELECTROCHEMICAL DETECTION; GENE MUTATION; NUCLEIC ACID BASE SUBSTITUTION; OXIDATION REDUCTION REACTION; PRIORITY JOURNAL;

EID: 0033572711     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/27.24.4830     Document Type: Article

References (55)

1. Skogerboe, K.J. (1995) Anal. Chem., 67, 449R-454R.
2. Fodor, S.P.A. (1997) Science, 277, 393.
3. Southern, E.M. (1996) Trends Genet., 12, 110-115.
4. Eng, C. and Vijg, J. (1997) Nature Biotechnol., 15, 422-426.
5. Golz, S., Birkenkampdemtroder, K. and Kemper, B. (1998) Nucleic Acids Res., 26, 1132-1133.
6. Bernard, P.S., Lay, M.J. and Wittwer, C.T. (1998) Anal. Biochem., 255, 101-107.
7. Osborne, R.J., Merlo, G.R., Mitsudomi, T., Venesio, T., Liscia, D.S., Cappa, A.P.M. and Chiba, I. (1991) Cancer Res., 51, 6194-6198.
8. Jackson, B.A. and Barton, J.K. (1997) J. Am. Chem. Soc., 119, 12986-12987.
9. Yamaguchi, M., Dao, V. and Modrich, P. (1998) J. Biol. Chem., 273, 9197-9201.
10. Ehsani, A., Low, J., Wallace, R.B. and Wu, A.M. (1993) Genomics, 15, 426-429.
11. Orita, M., Suzuki, Y., Sekiya, J. and Hayashi, I. (1989) Genomics, 5, 874-879.
12. Okahata, Y., Matsunobu, Y., Ijiro, K., Mukae, M., Murakami, A. and Makino, K. (1992) J. Am. Chem. Soc., 114, 8299-8300.
13. Wang, J., Nielsen, P.E., Jiang, M., Cai, X.H., Fernandes, J.R., Grant, D.H. and Ozsoz, M. (1997) Anal. Chem., 69, 5200-5202.
14. Bardea, A., Dagan, A., Bendov, I., Amit, B. and Willner, I. (1998) Chem. Commun., 839-840.
15. Chen, Y.H., Song, J.D. and Li, D.W. (1997) Sci. China Ser. C, 40, 463-469.
16. Drmanac, R., Drmanac, S., Strezoska, Z., Paunesku, T., Labat, I., Zeremski, M., Snoddy, J., Funkhouser, W.K., Koop, B., Hood, L. and Crkvenjakov, R. (1993) Science, 260, 1649-1653.
17. Chee, M., Yang, R., Hubbell, E., Berno, A., Huang, X.C., Stern, D., Winkler, J., Lockhart, D.J., Morris, M.S. and Fodor, S.P.A. (1996) Science, 274, 610-614.
18. Theil, A.J., Frutos, A.G., Jordan, C.E., Corn, R.M. and Smith, L.M. (1997) Anal. Chem., 69, 4948-4956.
19. Isola, N.R., Stokes, D.L. and Vodinh, T. (1998) Anal. Chem., 70, 1352-1356.
20. Lin, V.S.Y., Motesharei, K., Dancil, K.P.S., Sailor, M.J. and Ghadiri, M.R. (1997) Science, 278, 840-843.
21. Gotoh, M., Hasebe, M., Ohira, T., Hasegawa, Y., Shinohara, Y., Sota, H., Nakao, J. and Tosu, M. (1997) Genet. Anal. Biomol. E, 14, 47-50.
22. Elghanian, R., Storhoff, J.J., Mucic, R.C., Letsinger, R.L. and Mirkin, C.A. (1997) Science, 277, 1078-1081.
23. Healey, B.G., Matson, R.S. and Walt, D.R. (1997) Anal. Biochem., 251, 270-279.
24. Millan, K.M. and Mikkelsen, S.R. (1993) Anal. Chem., 65, 2317-2323.
25. Millan, K.M., Saraullo, A. and Mikkelsen, S.R. (1994) Anal. Chem., 66, 2943-2948.
26. Xu, X.H. and Bard, A.J. (1995) J. Am. Chem. Soc., 117, 2627-2631.
27. Xu, X.H., Yang, H.C., Mallouk, T.E. and Bard, A.J. (1994) J. Am. Chem. Soc., 116, 8386-8387.
28. Johnston, D.H., Glasgow, K.C. and Thorp, H.H. (1996) J. Am. Chem. Soc., 117, 8933-8938.
29. Napier, M.E., Loomis, C.R., Sistare, M.F., Kim, J., Eckhardt, A.E. and Thorp, H.H. (1997) Bioconjugate Chem., 8, 906-913.
30. Wang, J., Palecek, E., Nielsen, P.E., Rivas, G., Cai, X.H., Shiraishi, H., Dontha, N., Luo, D.B. and Farias, P.A.M. (1996) J. Am. Chem. Soc., 118, 7667-7670.
31. Wang, J., Cai, X.H., Rivas, G., Shiraishi, H., Farias, P.A.M. and Dontha, N. (1996) Anal. Chem., 68, 2629-2634.
32. Palanti, S., Marrazza, G. and Mascini, M. (1996) Anal. Lett., 29, 2309-2331.
33. Liu, S.H., Ye, J.N., He, P.G. and Fang, Y.H. (1996) Anal. Chem. Acta, 335, 239-243.
34. DeLumley-Woodyear, T., Campbell, C.N. and Heller, A. (1996) J. Am. Chem. Soc., 118, 5504-5505.
35. Hashimoto, K., Ito, K. and Ishimori, Y. (1994) Anal. Chim. Acta, 286, 219-224.
36. Holmlin, R.E., Dandliker, P.J. and Barton, J.K. (1998) Angew. Chem. Int. Ed. Eng., 36, 2714-2730.
37. Kelley, S.O., Holmlin, R.E., Stemp, E.D.A. and Barton, J.K. (1997) J. Am. Chem. Soc., 119, 9861-9870.
38. Kelley, S.O. and Barton, J.K. (1998) Chem. Biol., 5, 413-425.
39. Kelley, S.O. and Barton, J.K. (1999) Science, 283, 375-381.
40. Kelley, S.O., Jackson, N.M., Barton, J.K. and Hill, M.G. (1997) Bioconjugate Chem., 8, 31-37.
41. Kelley, S.O., Jackson, N.M., Hill, M.G. and Barton, J.K. (1999) Angew. Chem., 38, 941.
42. Hall, D.B. and Barton, J.K. (1997) J. Am. Chem. Soc., 119, 5045-5046.
43. Hunter, W.N., Brown, T. and Kennard, O. (1987) Nucleic Acids Res., 15, 6589-6606.
44. Brown, T., Hunter, W.N., Kneale, G. and Kennard, O. (1986) Proc. Natl Acad. Sci. USA, 83, 2402-2406.
45. Kelley, S.O., Barton, J.K., Jackson, N.M., McPherson, L.D., Potter, A.B., Spain, E.M., Allen, M.J. and Hill, M.G. (1998) Langmuir, 14, 6781-6784.
46. Ihara, T., Takata, J. and Takagi, M. (1998) Anal. Chim. Acta, 365, 49-54.
47. Harrison, J.G. and Balasubramanian, S.A. (1997) Bioorg. Med. Chem. Lett., 7, 1041-1046.
48. Karthe, P. and Gautham, N. (1998) Acta Crystallogr., 54, 501-509.
49. Wang, A.H.J., Ughetto, G., Quigley, G.J. and Rich, A. (1987) Biochemistry, 26, 1152-1163.
50. Becker, H.C. and Norden, B. (1997) J. Am. Chem. Soc., 119, 5798-5803.
51. Bard, A.J. and Faulkner, L.R. (1980) Electrochemical Methods. Wiley & Sons, NY.
52. Patel, D.J., Kozlowski, S.A., Ikuta, S. and Itakura, K. (1984) FASEB, 11, 2663-2670.
53. Marcus, R.A. and Sutin, N. (1985) Biochim. Biophys. Acta, 811, 265-322.
54. Chaires, J.B., Dattagupta, N. and Crothers, D.M. (1982) Biochemistry, 21, 3933-3940.
55. Tuite, E. and Kelly, J.M. (1995) Biopolymers, 35, 419.