Site-specific inhibition of transcription factor binding to DNA by a metallointercalator

Biochemistry

Volumn 38, Issue 16, 1999, Pages 5155-5163

  Odom, Duncan T ^a   Parker, Carl S ^a   Barton, Jacqueline K ^a  

^a California Institute of Technology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

METAL COMPLEX; TRANSCRIPTION FACTOR AP 1;

ARTICLE; BINDING AFFINITY; BINDING SITE; DNA PROTEIN COMPLEX; MOLECULAR RECOGNITION; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN EXPRESSION;

BINDING SITES; BINDING, COMPETITIVE; DNA; DNA-BINDING PROTEINS; FUNGAL PROTEINS; INTERCALATING AGENTS; MODELS, MOLECULAR; OLIGONUCLEOTIDES; ORGANOMETALLIC COMPOUNDS; PHENANTHRENES; PHENANTHROLINES; PHOTOLYSIS; PROTEIN BINDING; RECOMBINANT PROTEINS; RHODIUM; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSCRIPTION FACTORS;

EID: 0033586725     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9827969     Document Type: Article

References (40)

1. Ahmad, I., and Rao, D. N. (1996) Crit. Rev. Biochem. Mol. Biol. 31, 361-380.
2. Donahue, B. A., Augot, M.,. Bellon, S. F., Treiber, D. K., Toney, J. H., Lippard, S. J., and Essigmann, J. M. (1990) Biochemistry 29, 5872-5880.
3. Pil, P. M., and Lippard, S. J., (1992) Science 256, 234-237.
4. Whitehead, J. P., and Lippard, S. J. (1996) Metal Ions Biol. Sys. 32, 687-726.
5. Tomasz, M., and Palom, Y. (1997) Pharm. Ther. 76, 73-87.
6. Poltev, V. I., Bruskov, V. I., Shulyupina, N. V., Rein, R., Shibata, M., Ornstein, R. L., and Miller, J. (1993) Mol. Biol. 27, 447-462.
7. Denison, C., and Kodadek, T. (1998) Chem. Biol. 5, R129-R145.
8. Liu, C. Smith, B. M., Ajito, K., Komatsu, H., GomezPaloma, L., Li, T. H., Theodorakis, E. A., Nicolau, K. C., and Vogt, P. K. (1996) Proc. Acad. Acad. Sci. U.S.A. 93, 940-944.
9. Nicolaou, K., Tsay, S. C., Suzukit, T., and Joyce, G. F. (1992)-J. Am. Chem. Soc. 114, 7555-7557.
10. Nicolaou, K., and Dai, W. (1991) Angew. Chem. 30, 1387-1416.
11. Wemmer, D. E., and Dervan, P. B. (1997) Curr. Opinion Struct. Biol. 7, 355-361.
12. Gottesfeld, J., Neely, L., Trauger, J. W., Baird, E. E., and Dervan, P. B. (1997) Nature 387, 202.
13. Terbrueggen, R. H., and Barton, J. K. (1995) Biochemistry 34, 8227-8234.
14. Johann, T. W., and Barton, J. K. (1996) Philos. Trans. R. Soc. London A 354, 299-324.
15. Hudson, B. P., and Barton, J. K. (1998) J. Am. Chem. Soc. 120, 6877-6888.
16. David, S. S., and Barton, J. K. (1993) J. Am. Chem. Soc. 115, 2984-2985.
17. Shields, T. P., and Barton, J. K. (1995) Biochemistry 34, 15049-15056.
18. Krotz, A. H., Hudson, B. P., and Barton, J. K., (1993) J. Am. Chem. Soc. 115, 12577-12578.
19. Sitlani, A., Long, E. C. Pyle, A. M., and Barton, J. K. (1992) J. Am. Chem. Soc. 114, 2303-2312.
20. Terbrueggen, R. H., Johann, T. W., and Barton, J. K. (1998) Inorg. Chem. 37, 6874-6883.
21. Campisi, D., Morii, T., and Barton, J. K. (1994) Biochemistry 33, 4130-4139.
22. Pabo, C. O., and Sauer, R. T. (1992) Annu. Rev. Biochem. 61, 1053.
23. Franklin, S. J., and Barton, J. K. (1998) Biochemistry 37, 16093-16105.
24. Kim, J. L., Nikolov, D. B., and Burley, S. K. (1993) Nature 365, 520-527.
25. Kim, Y. C., Geiger, J. H., Hahn, S., and Sigler, P. B. (1993) Nature 365, 512-520.
26. Oshea, E. K., Klemm, J. D., Kim, P. S., and Alber, T. (1991) Science 254, 539-544.
27. Moye-Rowley, W. S., Harshman, K. D., and Parker, C. S. (1988) Cold Spring Harbor Symp. Quant. Biol. LIII, 711.
28. Moye-Rowley, W. S., Harshman, K. D., and Parker, C. (1989) Genes Dev. 3, 283-292; unpublished results in the Parker lab.
29. Wemmie, J., Wu, A.-L., Harshman, K. D., Parker, C. S., and Moye-Rowley, W. (1994) J. Biol. Chem. 269, 14690.
30. Harshman, K. D., Moye-Rowley, W. S., and Parker, C. (1988) Cell 53, 321-330.
31. Chow, C. S., and Barton, J. K. (1992) Methods Enzymol. 212, 219-242.
32. Kunkel, T. A. (1985) Proc. Natl. Acad. Sci. U.S.A. 82, 488-492.
33. Singleton, S., and Dervan, P. B. (1992) J. Am. Chem. Soc. 114, 6957.
34. LaValle, E. R., DiBlasio, E. A., Kovacic, S., Grant, K. L., Schendel, P. F., and McCoy, J. M. (1993) BioTechnology 11, 187-193.
35. Johann, T. W. California Institute of Technology, Ph.D. Dissertation.
36. Vinson, C. R., Sigler, P. B., and McKnight, S. (1989) Science 245, 911.
37. Ellenberger, T. E., Brandi, C. J., Struhl, K., and Harrison, S. C. (1992) Cell 71, 1223-1237.
38. Metallo, S. J., and Schepartz, A. (1997) Nat. Struct. Biol. 4, 115-117.
39. Weiss, M. A. (1990) Biochemistry 29, 8020-8024.
40. Sitlani, A., Dupureur, C. M., and Barton, J. K. (1993) J. Am. Chem. Soc. 115, 12589-12590.