-
1
-
-
84929166604
-
High-throughput spatial mapping of single-cell RNA-seq data to tissue of origin
-
Achim, K., Pettit, J.B., Saraiva, L.R., Gavriouchkina, D., Larsson, T., Arendt, D., Marioni, J.C., High-throughput spatial mapping of single-cell RNA-seq data to tissue of origin. Nat. Biotechnol. 33 (2015), 503–509.
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 503-509
-
-
Achim, K.1
Pettit, J.B.2
Saraiva, L.R.3
Gavriouchkina, D.4
Larsson, T.5
Arendt, D.6
Marioni, J.C.7
-
2
-
-
85006345820
-
A Multiplexed Single-Cell CRISPR Screening Platform Enables Systematic Dissection of the Unfolded Protein Response
-
Adamson, B., Norman, T.M., Jost, M., Cho, M.Y., Nuñez, J.K., Chen, Y., Villalta, J.E., Gilbert, L.A., Horlbeck, M.A., Hein, M.Y., et al. A Multiplexed Single-Cell CRISPR Screening Platform Enables Systematic Dissection of the Unfolded Protein Response. Cell 167 (2016), 1867–1882.
-
(2016)
Cell
, vol.167
, pp. 1867-1882
-
-
Adamson, B.1
Norman, T.M.2
Jost, M.3
Cho, M.Y.4
Nuñez, J.K.5
Chen, Y.6
Villalta, J.E.7
Gilbert, L.A.8
Horlbeck, M.A.9
Hein, M.Y.10
-
3
-
-
82255175259
-
Strategies to discover regulatory circuits of the mammalian immune system
-
Amit, I., Regev, A., Hacohen, N., Strategies to discover regulatory circuits of the mammalian immune system. Nat. Rev. Immunol. 11 (2011), 873–880.
-
(2011)
Nat. Rev. Immunol.
, vol.11
, pp. 873-880
-
-
Amit, I.1
Regev, A.2
Hacohen, N.3
-
4
-
-
84943798099
-
Erratum: Pathogen cell-to-cell variability drives heterogeneity in host immune responses
-
Avraham, R., Haseley, N., Brown, D., Penaranda, C., Jijon, H.B., Trombetta, J.J., Satija, R., Shalek, A.K., Xavier, R.J., Regev, A., et al. Erratum: Pathogen cell-to-cell variability drives heterogeneity in host immune responses. Cell, 163, 2015, 523.
-
(2015)
Cell
, vol.163
, pp. 523
-
-
Avraham, R.1
Haseley, N.2
Brown, D.3
Penaranda, C.4
Jijon, H.B.5
Trombetta, J.J.6
Satija, R.7
Shalek, A.K.8
Xavier, R.J.9
Regev, A.10
-
5
-
-
84974530643
-
Long-lived self-renewing bone marrow-derived macrophages displace embryo-derived cells to inhabit adult serous cavities
-
ncomms11852
-
Bain, C.C., Hawley, C.A., Garner, H., Scott, C.L., Schridde, A., Steers, N.J., Mack, M., Joshi, A., Guilliams, M., Mowat, A.M.I., et al. Long-lived self-renewing bone marrow-derived macrophages displace embryo-derived cells to inhabit adult serous cavities. Nat. Commun., 7, 2016 ncomms11852.
-
(2016)
Nat. Commun.
, vol.7
-
-
Bain, C.C.1
Hawley, C.A.2
Garner, H.3
Scott, C.L.4
Schridde, A.5
Steers, N.J.6
Mack, M.7
Joshi, A.8
Guilliams, M.9
Mowat, A.M.I.10
-
6
-
-
84958078627
-
The heterogeneity of human CD127(+) innate lymphoid cells revealed by single-cell RNA sequencing. Nat
-
Björklund, Å.K., Forkel, M., Picelli, S., Konya, V., Theorell, J., Friberg, D., Sandberg, R., Mjösberg, J., The heterogeneity of human CD127(+) innate lymphoid cells revealed by single-cell RNA sequencing. Nat. Immunol 17 (2016), 451–460.
-
(2016)
Immunol
, vol.17
, pp. 451-460
-
-
Björklund, Å.K.1
Forkel, M.2
Picelli, S.3
Konya, V.4
Theorell, J.5
Friberg, D.6
Sandberg, R.7
Mjösberg, J.8
-
7
-
-
84887109584
-
Accounting for technical noise in single-cell RNA-seq experiments
-
Brennecke, P., Anders, S., Kim, J.K., Kołodziejczyk, A. a, Zhang, X., Proserpio, V., Baying, B., Benes, V., Teichmann, S. a, Marioni, J.C., et al. Accounting for technical noise in single-cell RNA-seq experiments. Nat. Methods 10 (2013), 1093–1095.
-
(2013)
Nat. Methods
, vol.10
, pp. 1093-1095
-
-
Brennecke, P.1
Anders, S.2
Kim, J.K.3
Kołodziejczyk, A.A.4
Zhang, X.5
Proserpio, V.6
Baying, B.7
Benes, V.8
Teichmann, S.A.9
Marioni, J.C.10
-
8
-
-
84939600854
-
Single-cell transcriptome analysis reveals coordinated ectopic gene-expression patterns in medullary thymic epithelial cells
-
Brennecke, P., Reyes, A., Pinto, S., Rattay, K., Nguyen, M., Kuchler, R., Huber, W., Kyewski, B., Steinmetz, L.M., Single-cell transcriptome analysis reveals coordinated ectopic gene-expression patterns in medullary thymic epithelial cells. Nat Immunol 16 (2015), 933–941.
-
(2015)
Nat Immunol
, vol.16
, pp. 933-941
-
-
Brennecke, P.1
Reyes, A.2
Pinto, S.3
Rattay, K.4
Nguyen, M.5
Kuchler, R.6
Huber, W.7
Kyewski, B.8
Steinmetz, L.M.9
-
9
-
-
84925873107
-
Immune regulation of metabolic homeostasis in health and disease
-
Brestoff, J.R., Artis, D., Immune regulation of metabolic homeostasis in health and disease. Cell 161 (2015), 146–160.
-
(2015)
Cell
, vol.161
, pp. 146-160
-
-
Brestoff, J.R.1
Artis, D.2
-
10
-
-
84920982264
-
Variation in the human immune system is largely driven by non-heritable influences
-
Brodin, P., Jojic, V., Gao, T., Bhattacharya, S., Angel, C.J., Furman, D., Shen-Orr, S., Dekker, C.L., Swan, G.E., Butte, A.J., et al. Variation in the human immune system is largely driven by non-heritable influences. Cell 160 (2015), 37–47.
-
(2015)
Cell
, vol.160
, pp. 37-47
-
-
Brodin, P.1
Jojic, V.2
Gao, T.3
Bhattacharya, S.4
Angel, C.J.5
Furman, D.6
Shen-Orr, S.7
Dekker, C.L.8
Swan, G.E.9
Butte, A.J.10
-
11
-
-
84937857359
-
Single-cell chromatin accessibility reveals principles of regulatory variation
-
Buenrostro, J.D., Wu, B., Litzenburger, U.M., Ruff, D., Gonzales, M.L., Snyder, M.P., Chang, H.Y., Greenleaf, W.J., Single-cell chromatin accessibility reveals principles of regulatory variation. Nature 523 (2015), 486–490.
-
(2015)
Nature
, vol.523
, pp. 486-490
-
-
Buenrostro, J.D.1
Wu, B.2
Litzenburger, U.M.3
Ruff, D.4
Gonzales, M.L.5
Snyder, M.P.6
Chang, H.Y.7
Greenleaf, W.J.8
-
12
-
-
85041108250
-
Integrated analysis of single cell transcriptomic data across conditions, technologies, and species
-
Butler, A., Satija, R., Integrated analysis of single cell transcriptomic data across conditions, technologies, and species. bioRxiv, 2017, 10.1101/164889.
-
(2017)
bioRxiv
-
-
Butler, A.1
Satija, R.2
-
13
-
-
85021129044
-
Multilineage communication regulates human liver bud development from pluripotency
-
Camp, J.G., Sekine, K., Gerber, T., Loeffler-Wirth, H., Binder, H., Gac, M., Kanton, S., Kageyama, J., Damm, G., Seehofer, D., et al. Multilineage communication regulates human liver bud development from pluripotency. Nature 546 (2017), 533–538.
-
(2017)
Nature
, vol.546
, pp. 533-538
-
-
Camp, J.G.1
Sekine, K.2
Gerber, T.3
Loeffler-Wirth, H.4
Binder, H.5
Gac, M.6
Kanton, S.7
Kageyama, J.8
Damm, G.9
Seehofer, D.10
-
14
-
-
84930006926
-
Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing
-
Cusanovich, D.A., Daza, R., Adey, A., Pliner, H.A., Christiansen, L., Gunderson, K.L., Steemers, F.J., Trapnell, C., Shendure, J., Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing. Science 348 (2015), 910–914.
-
(2015)
Science
, vol.348
, pp. 910-914
-
-
Cusanovich, D.A.1
Daza, R.2
Adey, A.3
Pliner, H.A.4
Christiansen, L.5
Gunderson, K.L.6
Steemers, F.J.7
Trapnell, C.8
Shendure, J.9
-
15
-
-
84982161976
-
Single-cell multimodal profiling reveals cellular epigenetic heterogeneity
-
Cheow, L.F., Courtois, E.T., Tan, Y., Viswanathan, R., Xing, Q., Tan, R.Z., Tan, D.S., Robson, P., Loh, Y.H., Quake, S.R., Burkholder, W.F., Single-cell multimodal profiling reveals cellular epigenetic heterogeneity. Nat. Methods 13 (2016), 833–836.
-
(2016)
Nat. Methods
, vol.13
, pp. 833-836
-
-
Cheow, L.F.1
Courtois, E.T.2
Tan, Y.3
Viswanathan, R.4
Xing, Q.5
Tan, R.Z.6
Tan, D.S.7
Robson, P.8
Loh, Y.H.9
Quake, S.R.10
Burkholder, W.F.11
-
16
-
-
84873605796
-
High-throughput sequencing of the paired human immunoglobulin heavy and light chain repertoire
-
DeKosky, B.J., Ippolito, G.C., Deschner, R.P., Lavinder, J.J., Wine, Y., Rawlings, B.M., Varadarajan, N., Giesecke, C., Dörner, T., Andrews, S.F., et al. High-throughput sequencing of the paired human immunoglobulin heavy and light chain repertoire. Nat. Biotechnol. 31 (2013), 166–169.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 166-169
-
-
DeKosky, B.J.1
Ippolito, G.C.2
Deschner, R.P.3
Lavinder, J.J.4
Wine, Y.5
Rawlings, B.M.6
Varadarajan, N.7
Giesecke, C.8
Dörner, T.9
Andrews, S.F.10
-
17
-
-
84892179132
-
Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells
-
Deng, Q., Ramskold, D., Reinius, B., Sandberg, R., Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells. Science 343 (2014), 193–196.
-
(2014)
Science
, vol.343
, pp. 193-196
-
-
Deng, Q.1
Ramskold, D.2
Reinius, B.3
Sandberg, R.4
-
18
-
-
80052365841
-
The innate immune system and the clearance of apoptotic cells
-
Devitt, A., Marshall, L.J., The innate immune system and the clearance of apoptotic cells. J. Leukoc. Biol. 90 (2011), 447–457.
-
(2011)
J. Leukoc. Biol.
, vol.90
, pp. 447-457
-
-
Devitt, A.1
Marshall, L.J.2
-
19
-
-
84924423596
-
Integrated genome and transcriptome sequencing from the same cell
-
Dey, S.S., Kester, L., Spanjaard, B., Bienko, M., van Oudenaarden, A., Integrated genome and transcriptome sequencing from the same cell. Nat. Biotechnol 33 (2015), 285–289.
-
(2015)
Nat. Biotechnol
, vol.33
, pp. 285-289
-
-
Dey, S.S.1
Kester, L.2
Spanjaard, B.3
Bienko, M.4
van Oudenaarden, A.5
-
20
-
-
85006488344
-
Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens
-
Dixit, A., Parnas, O., Li, B., Chen, J., Fulco, C.P., Jerby-Arnon, L., Marjanovic, N.D., Dionne, D., Burks, T., Raychowdhury, R., et al. Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens. Cell 167 (2016), 1853–1866.
-
(2016)
Cell
, vol.167
, pp. 1853-1866
-
-
Dixit, A.1
Parnas, O.2
Li, B.3
Chen, J.4
Fulco, C.P.5
Jerby-Arnon, L.6
Marjanovic, N.D.7
Dionne, D.8
Burks, T.9
Raychowdhury, R.10
-
21
-
-
0001406390
-
Electronic separation of biological cells by volume
-
Fulwyler, M., Electronic separation of biological cells by volume. Science 150 (1965), 910–911.
-
(1965)
Science
, vol.150
, pp. 910-911
-
-
Fulwyler, M.1
-
22
-
-
84949252174
-
Single-Cell Genomics Unveils Critical Regulators of Th17 Cell Pathogenicity
-
Gaublomme, J.T., Yosef, N., Lee, Y., Gertner, R.S., Yang, L.V., Wu, C., Pandolfi, P.P., Mak, T., Satija, R., Shalek, A.K., et al. Single-Cell Genomics Unveils Critical Regulators of Th17 Cell Pathogenicity. Cell 163 (2015), 1400–1412.
-
(2015)
Cell
, vol.163
, pp. 1400-1412
-
-
Gaublomme, J.T.1
Yosef, N.2
Lee, Y.3
Gertner, R.S.4
Yang, L.V.5
Wu, C.6
Pandolfi, P.P.7
Mak, T.8
Satija, R.9
Shalek, A.K.10
-
23
-
-
33745582806
-
Dynamic imaging of the immune system: progress, pitfalls and promise
-
Germain, R.N., Miller, M.J., Dustin, M.L., Nussenzweig, M.C., Dynamic imaging of the immune system: progress, pitfalls and promise. Nat. Rev. Immunol. 6 (2006), 497–507.
-
(2006)
Nat. Rev. Immunol.
, vol.6
, pp. 497-507
-
-
Germain, R.N.1
Miller, M.J.2
Dustin, M.L.3
Nussenzweig, M.C.4
-
24
-
-
0015151267
-
[Cytostatic effect of daunomycin in impulsecytophotometric test]
-
Göhde, W., Dittrich, W., [Cytostatic effect of daunomycin in impulsecytophotometric test]. Arzneimittelforschung 21 (1971), 1656–1658.
-
(1971)
Arzneimittelforschung
, vol.21
, pp. 1656-1658
-
-
Göhde, W.1
Dittrich, W.2
-
25
-
-
28544446111
-
Monocyte and macrophage heterogeneity
-
Gordon, S., Taylor, P.R., Monocyte and macrophage heterogeneity. Nat. Rev. Immunol. 5 (2005), 953–964.
-
(2005)
Nat. Rev. Immunol.
, vol.5
, pp. 953-964
-
-
Gordon, S.1
Taylor, P.R.2
-
26
-
-
84920724792
-
Environment drives selection and function of enhancers controlling tissue-specific macrophage identities
-
Gosselin, D., Link, V.M., Romanoski, C.E., Fonseca, G.J., Eichenfield, D.Z., Spann, N.J., Stender, J.D., Chun, H.B., Garner, H., Geissmann, F., Glass, C.K., Environment drives selection and function of enhancers controlling tissue-specific macrophage identities. Cell 159 (2014), 1327–1340.
-
(2014)
Cell
, vol.159
, pp. 1327-1340
-
-
Gosselin, D.1
Link, V.M.2
Romanoski, C.E.3
Fonseca, G.J.4
Eichenfield, D.Z.5
Spann, N.J.6
Stender, J.D.7
Chun, H.B.8
Garner, H.9
Geissmann, F.10
Glass, C.K.11
-
27
-
-
84941201582
-
Single-cell messenger RNA sequencing reveals rare intestinal cell types
-
Grün, D., Lyubimova, A., Kester, L., Wiebrands, K., Basak, O., Sasaki, N., Clevers, H., van Oudenaarden, A., Single-cell messenger RNA sequencing reveals rare intestinal cell types. Nature 525 (2015), 251–255.
-
(2015)
Nature
, vol.525
, pp. 251-255
-
-
Grün, D.1
Lyubimova, A.2
Kester, L.3
Wiebrands, K.4
Basak, O.5
Sasaki, N.6
Clevers, H.7
van Oudenaarden, A.8
-
28
-
-
84983780960
-
The Spectrum and Regulatory Landscape of Intestinal Innate Lymphoid Cells Are Shaped by the Microbiome
-
Gury-BenAri, M., Thaiss, C.A., Serafini, N., Winter, D.R., Giladi, A., Lara-Astiaso, D., Levy, M., Salame, T.M., Weiner, A., David, E., et al. The Spectrum and Regulatory Landscape of Intestinal Innate Lymphoid Cells Are Shaped by the Microbiome. Cell 166 (2016), 1231–1246.
-
(2016)
Cell
, vol.166
, pp. 1231-1246
-
-
Gury-BenAri, M.1
Thaiss, C.A.2
Serafini, N.3
Winter, D.R.4
Giladi, A.5
Lara-Astiaso, D.6
Levy, M.7
Salame, T.M.8
Weiner, A.9
David, E.10
-
29
-
-
84980325679
-
Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons
-
Habib, N., Li, Y., Heidenreich, M., Swiech, L., Avraham-Davidi, I., Trombetta, J.J., Hession, C., Zhang, F., Regev, A., Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons. Science 7 (2016), 925–928.
-
(2016)
Science
, vol.7
, pp. 925-928
-
-
Habib, N.1
Li, Y.2
Heidenreich, M.3
Swiech, L.4
Avraham-Davidi, I.5
Trombetta, J.J.6
Hession, C.7
Zhang, F.8
Regev, A.9
-
30
-
-
84941753288
-
Diffusion maps for high-dimensional single-cell analysis of differentiation data
-
Haghverdi, L., Buettner, F., Theis, F.J., Diffusion maps for high-dimensional single-cell analysis of differentiation data. Bioinformatics 31 (2015), 2989–2998.
-
(2015)
Bioinformatics
, vol.31
, pp. 2989-2998
-
-
Haghverdi, L.1
Buettner, F.2
Theis, F.J.3
-
31
-
-
85016148799
-
Single-cell spatial reconstruction reveals global division of labour in the mammalian liver
-
Halpern, K.B., Shenhav, R., Matcovitch-Natan, O., Toth, B., Lemze, D., Golan, M., Massasa, E.E., Baydatch, S., Landen, S., Moor, A.E., et al. Single-cell spatial reconstruction reveals global division of labour in the mammalian liver. Nature 542 (2017), 352–356.
-
(2017)
Nature
, vol.542
, pp. 352-356
-
-
Halpern, K.B.1
Shenhav, R.2
Matcovitch-Natan, O.3
Toth, B.4
Lemze, D.5
Golan, M.6
Massasa, E.E.7
Baydatch, S.8
Landen, S.9
Moor, A.E.10
-
32
-
-
84903993800
-
Linking T-cell receptor sequence to functional phenotype at the single-cell level
-
Han, A., Glanville, J., Hansmann, L., Davis, M.M., Linking T-cell receptor sequence to functional phenotype at the single-cell level. Nat. Biotechnol. 32 (2014), 684–692.
-
(2014)
Nat. Biotechnol.
, vol.32
, pp. 684-692
-
-
Han, A.1
Glanville, J.2
Hansmann, L.3
Davis, M.M.4
-
33
-
-
84866953427
-
CEL-Seq: Single-Cell RNA-Seq by Multiplexed Linear Amplification
-
Hashimshony, T., Wagner, F., Sher, N., Yanai, I., CEL-Seq: Single-Cell RNA-Seq by Multiplexed Linear Amplification. Cell Reports 2 (2012), 666–673.
-
(2012)
Cell Reports
, vol.2
, pp. 666-673
-
-
Hashimshony, T.1
Wagner, F.2
Sher, N.3
Yanai, I.4
-
34
-
-
84967215049
-
Low Dimensionality in Gene Expression Data Enables the Accurate Extraction of Transcriptional Programs from Shallow Sequencing
-
Heimberg, G., Bhatnagar, R., El-Samad, H., Thomson, M., Low Dimensionality in Gene Expression Data Enables the Accurate Extraction of Transcriptional Programs from Shallow Sequencing. Cell Syst 2 (2016), 239–250.
-
(2016)
Cell Syst
, vol.2
, pp. 239-250
-
-
Heimberg, G.1
Bhatnagar, R.2
El-Samad, H.3
Thomson, M.4
-
35
-
-
84922012748
-
Single-cell technologies sharpen up mammalian stem cell research
-
Hoppe, P.S., Coutu, D.L., Schroeder, T., Single-cell technologies sharpen up mammalian stem cell research. Nat. Cell Biol. 16 (2014), 919–927.
-
(2014)
Nat. Cell Biol.
, vol.16
, pp. 919-927
-
-
Hoppe, P.S.1
Coutu, D.L.2
Schroeder, T.3
-
36
-
-
54449093241
-
Differentiation and heterogeneity in the mononuclear phagocyte system
-
Hume, D.A., Differentiation and heterogeneity in the mononuclear phagocyte system. Mucosal Immunol. 1 (2008), 432–441.
-
(2008)
Mucosal Immunol.
, vol.1
, pp. 432-441
-
-
Hume, D.A.1
-
37
-
-
84895069488
-
Quantitative single-cell RNA-seq with unique molecular identifiers
-
Islam, S., Zeisel, A., Joost, S., La Manno, G., Zajac, P., Kasper, M., Lönnerberg, P., Linnarsson, S., Quantitative single-cell RNA-seq with unique molecular identifiers. Nat. Methods 11 (2014), 163–166.
-
(2014)
Nat. Methods
, vol.11
, pp. 163-166
-
-
Islam, S.1
Zeisel, A.2
Joost, S.3
La Manno, G.4
Zajac, P.5
Kasper, M.6
Lönnerberg, P.7
Linnarsson, S.8
-
38
-
-
84893905629
-
Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types
-
Jaitin, D.A., Kenigsberg, E., Keren-Shaul, H., Elefant, N., Paul, F., Zaretsky, I., Mildner, A., Cohen, N., Jung, S., Tanay, A., Amit, I., Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types. Science 343 (2014), 776–779.
-
(2014)
Science
, vol.343
, pp. 776-779
-
-
Jaitin, D.A.1
Kenigsberg, E.2
Keren-Shaul, H.3
Elefant, N.4
Paul, F.5
Zaretsky, I.6
Mildner, A.7
Cohen, N.8
Jung, S.9
Tanay, A.10
Amit, I.11
-
39
-
-
85006269827
-
Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq
-
Jaitin, D.A., Weiner, A., Yofe, I., Lara-Astiaso, D., Keren-Shaul, H., David, E., Salame, T.M., Tanay, A., van Oudenaarden, A., Amit, I., Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq. Cell 167 (2016), 1883–1896.
-
(2016)
Cell
, vol.167
, pp. 1883-1896
-
-
Jaitin, D.A.1
Weiner, A.2
Yofe, I.3
Lara-Astiaso, D.4
Keren-Shaul, H.5
David, E.6
Salame, T.M.7
Tanay, A.8
van Oudenaarden, A.9
Amit, I.10
-
40
-
-
85011341602
-
Massively parallel clonal analysis using CRISPR / Cas9 induced genetic scars
-
Junker, J.P., Spanjaard, B., Peterson-Maduro, J., Alemany, A., Hu, B., Florescu, M., Van Oudenaarden, A., Massively parallel clonal analysis using CRISPR / Cas9 induced genetic scars. bioRxiv, 2016, 10.1101/056499.
-
(2016)
bioRxiv
-
-
Junker, J.P.1
Spanjaard, B.2
Peterson-Maduro, J.3
Alemany, A.4
Hu, B.5
Florescu, M.6
Van Oudenaarden, A.7
-
41
-
-
85020287843
-
A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease
-
Keren-Shaul, H., Spinrad, A., Weiner, A., Matcovitch-Natan, O., Dvir-Szternfeld, R., Ulland, T.K., David, E., Baruch, K., Lara-Astaiso, D., Toth, B., et al. A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease. Cell 169 (2017), 1276–1290.
-
(2017)
Cell
, vol.169
, pp. 1276-1290
-
-
Keren-Shaul, H.1
Spinrad, A.2
Weiner, A.3
Matcovitch-Natan, O.4
Dvir-Szternfeld, R.5
Ulland, T.K.6
David, E.7
Baruch, K.8
Lara-Astaiso, D.9
Toth, B.10
-
42
-
-
84903574951
-
Bayesian approach to single-cell differential expression analysis
-
Kharchenko, P.V., Silberstein, L., Scadden, D.T., Bayesian approach to single-cell differential expression analysis. Nat. Methods 11 (2014), 740–742.
-
(2014)
Nat. Methods
, vol.11
, pp. 740-742
-
-
Kharchenko, P.V.1
Silberstein, L.2
Scadden, D.T.3
-
43
-
-
84929684998
-
Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells
-
Klein, A.M., Mazutis, L., Akartuna, I., Tallapragada, N., Veres, A., Li, V., Peshkin, L., Weitz, D.A., Kirschner, M.W., Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells. Cell 161 (2015), 1187–1201.
-
(2015)
Cell
, vol.161
, pp. 1187-1201
-
-
Klein, A.M.1
Mazutis, L.2
Akartuna, I.3
Tallapragada, N.4
Veres, A.5
Li, V.6
Peshkin, L.7
Weitz, D.A.8
Kirschner, M.W.9
-
44
-
-
0016756272
-
Continuous cultures of fused cells secreting antibody of predefined specificity
-
Köhler, G., Milstein, C., Continuous cultures of fused cells secreting antibody of predefined specificity. Nature 256 (1975), 495–497.
-
(1975)
Nature
, vol.256
, pp. 495-497
-
-
Köhler, G.1
Milstein, C.2
-
45
-
-
84949627236
-
Regulation of metabolism by the innate immune system
-
Lackey, D.E., Olefsky, J.M., Regulation of metabolism by the innate immune system. Nat. Rev. Endocrinol. 12 (2016), 15–28.
-
(2016)
Nat. Rev. Endocrinol.
, vol.12
, pp. 15-28
-
-
Lackey, D.E.1
Olefsky, J.M.2
-
46
-
-
84920724791
-
Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment
-
Lavin, Y., Winter, D., Blecher-Gonen, R., David, E., Keren-Shaul, H., Merad, M., Jung, S., Amit, I., Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment. Cell 159 (2014), 1312–1326.
-
(2014)
Cell
, vol.159
, pp. 1312-1326
-
-
Lavin, Y.1
Winter, D.2
Blecher-Gonen, R.3
David, E.4
Keren-Shaul, H.5
Merad, M.6
Jung, S.7
Amit, I.8
-
47
-
-
85018766073
-
Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses
-
Lavin, Y., Kobayashi, S., Leader, A., Amir, E.D., Elefant, N., Bigenwald, C., Remark, R., Sweeney, R., Becker, C.D., Levine, J.H., et al. Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses. Cell 169 (2017), 750–765.
-
(2017)
Cell
, vol.169
, pp. 750-765
-
-
Lavin, Y.1
Kobayashi, S.2
Leader, A.3
Amir, E.D.4
Elefant, N.5
Bigenwald, C.6
Remark, R.7
Sweeney, R.8
Becker, C.D.9
Levine, J.H.10
-
48
-
-
84934442835
-
Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis
-
Levine, J.H.H., Simonds, E.F.F., Bendall, S.C.C., Davis, K.L.L., Amir, A.D., Tadmor, M.D., Litvin, O., Fienberg, H.G., Jager, A., Zunder, E.R., et al. Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis. Cell 162 (2015), 184–197.
-
(2015)
Cell
, vol.162
, pp. 184-197
-
-
Levine, J.H.H.1
Simonds, E.F.F.2
Bendall, S.C.C.3
Davis, K.L.L.4
Amir, A.D.5
Tadmor, M.D.6
Litvin, O.7
Fienberg, H.G.8
Jager, A.9
Zunder, E.R.10
-
49
-
-
85040750667
-
Single-cell RNA-seq and computational analysis using temporal mixture modelling resolves Th1/Tfh fate bifurcation in malaria
-
Lönnberg, T., Svensson, V., James, K.R., Fernandez-Ruiz, D., Sebina, I., Montandon, R., Soon, M.S.F., Fogg, L.G., Nair, A.S., Liligeto, U., et al. Single-cell RNA-seq and computational analysis using temporal mixture modelling resolves Th1/Tfh fate bifurcation in malaria. Sci. Immunol., 2, 2017, eaal2192.
-
(2017)
Sci. Immunol.
, vol.2
, pp. eaal2192
-
-
Lönnberg, T.1
Svensson, V.2
James, K.R.3
Fernandez-Ruiz, D.4
Sebina, I.5
Montandon, R.6
Soon, M.S.F.7
Fogg, L.G.8
Nair, A.S.9
Liligeto, U.10
-
50
-
-
84929684999
-
Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets
-
Macosko, E.Z.Z., Basu, A., Satija, R., Nemesh, J., Shekhar, K., Goldman, M., Tirosh, I., Bialas, A.R.R., Kamitaki, N., Martersteck, E.M.M., et al. Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets. Cell 161 (2015), 1202–1214.
-
(2015)
Cell
, vol.161
, pp. 1202-1214
-
-
Macosko, E.Z.Z.1
Basu, A.2
Satija, R.3
Nemesh, J.4
Shekhar, K.5
Goldman, M.6
Tirosh, I.7
Bialas, A.R.R.8
Kamitaki, N.9
Martersteck, E.M.M.10
-
51
-
-
84976883162
-
Microglia development follows a stepwise program to regulate brain homeostasis
-
Matcovitch-Natan, O., Winter, D.R., Giladi, A., Vargas Aguilar, S., Spinrad, A., Sarrazin, S., Ben-Yehuda, H., David, E., Zelada Gonzalez, F., Perrin, P., et al. Microglia development follows a stepwise program to regulate brain homeostasis. Science, 353, 2016, aad8670.
-
(2016)
Science
, vol.353
, pp. aad8670
-
-
Matcovitch-Natan, O.1
Winter, D.R.2
Giladi, A.3
Vargas Aguilar, S.4
Spinrad, A.5
Sarrazin, S.6
Ben-Yehuda, H.7
David, E.8
Zelada Gonzalez, F.9
Perrin, P.10
-
52
-
-
84974576984
-
Whole-organism lineage tracing by combinatorial and cumulative genome editing
-
McKenna, A., Findlay, G.M., Gagnon, J.A., Horwitz, M.S., Schier, A.F., Shendure, J., Whole-organism lineage tracing by combinatorial and cumulative genome editing. Science, 353, 2016, aaf7907.
-
(2016)
Science
, vol.353
, pp. aaf7907
-
-
McKenna, A.1
Findlay, G.M.2
Gagnon, J.A.3
Horwitz, M.S.4
Schier, A.F.5
Shendure, J.6
-
53
-
-
85037715914
-
Spatial reconstruction of immune niches by combining photoactivatable reporters and scRNA-seq
-
Medaglia, C., Giladi, A., Stoler-Barak, L., De Giovanni, M., Salame, T.M., Biram, A., David, E., Li, H., Iannacone, M., Shulman, Z., et al. Spatial reconstruction of immune niches by combining photoactivatable reporters and scRNA-seq. Science 358 (2017), 1622–1626.
-
(2017)
Science
, vol.358
, pp. 1622-1626
-
-
Medaglia, C.1
Giladi, A.2
Stoler-Barak, L.3
De Giovanni, M.4
Salame, T.M.5
Biram, A.6
David, E.7
Li, H.8
Iannacone, M.9
Shulman, Z.10
-
54
-
-
84939622896
-
Aire controls gene expression in the thymic epithelium with ordered stochasticity
-
Meredith, M., Zemmour, D., Mathis, D., Benoist, C., Aire controls gene expression in the thymic epithelium with ordered stochasticity. Nat. Immunol. 16 (2015), 942–949.
-
(2015)
Nat. Immunol.
, vol.16
, pp. 942-949
-
-
Meredith, M.1
Zemmour, D.2
Mathis, D.3
Benoist, C.4
-
55
-
-
84981312051
-
Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction
-
Mooijman, D., Dey, S.S., Boisset, J.-C., Crosetto, N., van Oudenaarden, A., Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction. Nat. Biotechnol 34 (2016), 852–856.
-
(2016)
Nat. Biotechnol
, vol.34
, pp. 852-856
-
-
Mooijman, D.1
Dey, S.S.2
Boisset, J.-C.3
Crosetto, N.4
van Oudenaarden, A.5
-
56
-
-
84885617426
-
Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
-
Nagano, T., Lubling, Y., Stevens, T.J., Schoenfelder, S., Yaffe, E., Dean, W., Laue, E.D., Tanay, A., Fraser, P., Single-cell Hi-C reveals cell-to-cell variability in chromosome structure. Nature 502 (2013), 59–64.
-
(2013)
Nature
, vol.502
, pp. 59-64
-
-
Nagano, T.1
Lubling, Y.2
Stevens, T.J.3
Schoenfelder, S.4
Yaffe, E.5
Dean, W.6
Laue, E.D.7
Tanay, A.8
Fraser, P.9
-
57
-
-
84876297531
-
Diverse and heritable lineage imprinting of early haematopoietic progenitors
-
Naik, S.H., Perié L., Swart, E., Gerlach, C., van Rooij, N., de Boer, R.J., Schumacher, T.N., Diverse and heritable lineage imprinting of early haematopoietic progenitors. Nature 496 (2013), 229–232.
-
(2013)
Nature
, vol.496
, pp. 229-232
-
-
Naik, S.H.1
Perié, L.2
Swart, E.3
Gerlach, C.4
van Rooij, N.5
de Boer, R.J.6
Schumacher, T.N.7
-
58
-
-
85009113270
-
A single-cell resolution map of mouse hematopoietic stem and progenitor cell differentiation
-
Nestorowa, S., Hamey, F.K., Pijuan Sala, B., Diamanti, E., Shepherd, M., Laurenti, E., Wilson, N.K., Kent, D.G., Gottgens, B., A single-cell resolution map of mouse hematopoietic stem and progenitor cell differentiation. Blood 128 (2016), 20–31.
-
(2016)
Blood
, vol.128
, pp. 20-31
-
-
Nestorowa, S.1
Hamey, F.K.2
Pijuan Sala, B.3
Diamanti, E.4
Shepherd, M.5
Laurenti, E.6
Wilson, N.K.7
Kent, D.G.8
Gottgens, B.9
-
59
-
-
85039047649
-
Single-cell RNA sequencing to explore immune cell heterogeneity
-
Published online August 7 2017.
-
Papalexi, E., Satija, R., Single-cell RNA sequencing to explore immune cell heterogeneity. Nat. Rev. Immunol., 2017 Published online August 7, 2017 https://doi.org/10.1038/nri.2017.76.
-
(2017)
Nat. Rev. Immunol.
-
-
Papalexi, E.1
Satija, R.2
-
60
-
-
84858766182
-
The blockade of immune checkpoints in cancer immunotherapy
-
Pardoll, D.M., The blockade of immune checkpoints in cancer immunotherapy. Nat. Rev. Cancer 12 (2012), 252–264.
-
(2012)
Nat. Rev. Cancer
, vol.12
, pp. 252-264
-
-
Pardoll, D.M.1
-
61
-
-
84950290139
-
Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors
-
Paul, F., Arkin, Y., Giladi, A., Jaitin, D.A.A., Kenigsberg, E., Keren-Shaul, H., Winter, D., Lara-Astiaso, D., Gury, M., Weiner, A., et al. Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors. Cell 163 (2015), 1663–1677.
-
(2015)
Cell
, vol.163
, pp. 1663-1677
-
-
Paul, F.1
Arkin, Y.2
Giladi, A.3
Jaitin, D.A.A.4
Kenigsberg, E.5
Keren-Shaul, H.6
Winter, D.7
Lara-Astiaso, D.8
Gury, M.9
Weiner, A.10
-
62
-
-
84950283224
-
The Branching Point in Erythro-Myeloid Differentiation
-
Perié L., Duffy, K.R., Kok, L., de Boer, R.J., Schumacher, T.N., The Branching Point in Erythro-Myeloid Differentiation. Cell 163 (2015), 1655–1662.
-
(2015)
Cell
, vol.163
, pp. 1655-1662
-
-
Perié, L.1
Duffy, K.R.2
Kok, L.3
de Boer, R.J.4
Schumacher, T.N.5
-
63
-
-
85015591616
-
Continuous genetic recording with self-targeting CRISPR-Cas in human cells
-
Perli, S.D., Cui, C.H., Lu, T.K., Continuous genetic recording with self-targeting CRISPR-Cas in human cells. Science 353 (2016), 339–342.
-
(2016)
Science
, vol.353
, pp. 339-342
-
-
Perli, S.D.1
Cui, C.H.2
Lu, T.K.3
-
64
-
-
84891677425
-
Full-length RNA-seq from single cells using Smart-seq2
-
Picelli, S., Faridani, O.R., Björklund, Å.K., Winberg, G., Sagasser, S., Sandberg, R., Full-length RNA-seq from single cells using Smart-seq2. Nat. Protoc 9 (2014), 171–181.
-
(2014)
Nat. Protoc
, vol.9
, pp. 171-181
-
-
Picelli, S.1
Faridani, O.R.2
Björklund, Å.K.3
Winberg, G.4
Sagasser, S.5
Sandberg, R.6
-
65
-
-
84864880991
-
Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
-
Ramsköld, D., Luo, S., Wang, Y.C., Li, R., Deng, Q., Faridani, O.R., Daniels, G.A., Khrebtukova, I., Loring, J.F., Laurent, L.C., et al. Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells. Nat. Biotechnol 30 (2012), 777–782.
-
(2012)
Nat. Biotechnol
, vol.30
, pp. 777-782
-
-
Ramsköld, D.1
Luo, S.2
Wang, Y.C.3
Li, R.4
Deng, Q.5
Faridani, O.R.6
Daniels, G.A.7
Khrebtukova, I.8
Loring, J.F.9
Laurent, L.C.10
-
66
-
-
84975122314
-
Computational flow cytometry: helping to make sense of high-dimensional immunology data
-
Saeys, Y., Gassen, S.V., Lambrecht, B.N., Computational flow cytometry: helping to make sense of high-dimensional immunology data. Nat. Rev. Immunol. 16 (2016), 449–462.
-
(2016)
Nat. Rev. Immunol.
, vol.16
, pp. 449-462
-
-
Saeys, Y.1
Gassen, S.V.2
Lambrecht, B.N.3
-
67
-
-
84929151009
-
Spatial reconstruction of single-cell gene expression data
-
Satija, R., Farrell, J.A., Gennert, D., Schier, A.F., Regev, A., Spatial reconstruction of single-cell gene expression data. Nat. Biotechnol 33 (2015), 495–502.
-
(2015)
Nat. Biotechnol
, vol.33
, pp. 495-502
-
-
Satija, R.1
Farrell, J.A.2
Gennert, D.3
Schier, A.F.4
Regev, A.5
-
68
-
-
84931394611
-
Identification of cDC1- and cDC2-committed DC progenitors reveals early lineage priming at the common DC progenitor stage in the bone marrow
-
Schlitzer, A., Sivakamasundari, V., Chen, J., Sumatoh, H.R., Schreuder, J., Lum, J., Malleret, B., Zhang, S., Larbi, A., Zolezzi, F., et al. Identification of cDC1- and cDC2-committed DC progenitors reveals early lineage priming at the common DC progenitor stage in the bone marrow. Nat. Immunol 16 (2015), 718–728.
-
(2015)
Nat. Immunol
, vol.16
, pp. 718-728
-
-
Schlitzer, A.1
Sivakamasundari, V.2
Chen, J.3
Sumatoh, H.R.4
Schreuder, J.5
Lum, J.6
Malleret, B.7
Zhang, S.8
Larbi, A.9
Zolezzi, F.10
-
69
-
-
84899929564
-
Heterogeneity in immune responses: from populations to single cells
-
Satija, R., Shalek, A.K., Heterogeneity in immune responses: from populations to single cells. Trends Immunol. 35 (2014), 219–229.
-
(2014)
Trends Immunol.
, vol.35
, pp. 219-229
-
-
Satija, R.1
Shalek, A.K.2
-
70
-
-
77449093887
-
Hematopoietic stem cell heterogeneity: subtypes, not unpredictable behavior
-
Schroeder, T., Hematopoietic stem cell heterogeneity: subtypes, not unpredictable behavior. Cell Stem Cell 6 (2010), 203–207.
-
(2010)
Cell Stem Cell
, vol.6
, pp. 203-207
-
-
Schroeder, T.1
-
71
-
-
84887093048
-
How do immune cells support and shape the brain in health, disease, and aging?
-
Schwartz, M., Kipnis, J., Rivest, S., Prat, A., How do immune cells support and shape the brain in health, disease, and aging?. J. Neurosci. 33 (2013), 17587–17596.
-
(2013)
J. Neurosci.
, vol.33
, pp. 17587-17596
-
-
Schwartz, M.1
Kipnis, J.2
Rivest, S.3
Prat, A.4
-
72
-
-
84974587998
-
Wishbone identifies bifurcating developmental trajectories from single-cell data
-
Setty, M., Tadmor, M.D., Reich-Zeliger, S., Angel, O., Salame, T.M., Kathail, P., Choi, K., Bendall, S., Friedman, N., Pe'er, D., Wishbone identifies bifurcating developmental trajectories from single-cell data. Nat. Biotechnol. 34 (2016), 637–645.
-
(2016)
Nat. Biotechnol.
, vol.34
, pp. 637-645
-
-
Setty, M.1
Tadmor, M.D.2
Reich-Zeliger, S.3
Angel, O.4
Salame, T.M.5
Kathail, P.6
Choi, K.7
Bendall, S.8
Friedman, N.9
Pe'er, D.10
-
73
-
-
84992437479
-
In Situ Transcription Profiling of Single Cells Reveals Spatial Organization of Cells in the Mouse Hippocampus
-
Shah, S., Lubeck, E., Zhou, W., Cai, L., In Situ Transcription Profiling of Single Cells Reveals Spatial Organization of Cells in the Mouse Hippocampus. Neuron 92 (2016), 342–357.
-
(2016)
Neuron
, vol.92
, pp. 342-357
-
-
Shah, S.1
Lubeck, E.2
Zhou, W.3
Cai, L.4
-
74
-
-
84878997106
-
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells
-
Shalek, A.K., Satija, R., Adiconis, X., Gertner, R.S., Gaublomme, J.T., Raychowdhury, R., Schwartz, S., Yosef, N., Malboeuf, C., Lu, D., et al. Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. Nature 498 (2013), 236–240.
-
(2013)
Nature
, vol.498
, pp. 236-240
-
-
Shalek, A.K.1
Satija, R.2
Adiconis, X.3
Gertner, R.S.4
Gaublomme, J.T.5
Raychowdhury, R.6
Schwartz, S.7
Yosef, N.8
Malboeuf, C.9
Lu, D.10
-
75
-
-
84903185013
-
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
-
Shalek, A.K., Satija, R., Shuga, J., Trombetta, J.J., Gennert, D., Lu, D., Chen, P., Gertner, R.S., Gaublomme, J.T., Yosef, N., et al. Single-cell RNA-seq reveals dynamic paracrine control of cellular variation. Nature 510 (2014), 363–369.
-
(2014)
Nature
, vol.510
, pp. 363-369
-
-
Shalek, A.K.1
Satija, R.2
Shuga, J.3
Trombetta, J.J.4
Gennert, D.5
Lu, D.6
Chen, P.7
Gertner, R.S.8
Gaublomme, J.T.9
Yosef, N.10
-
76
-
-
84927130807
-
Immune checkpoint targeting in cancer therapy: toward combination strategies with curative potential
-
Sharma, P., Allison, J.P., Immune checkpoint targeting in cancer therapy: toward combination strategies with curative potential. Cell 161 (2015), 205–214.
-
(2015)
Cell
, vol.161
, pp. 205-214
-
-
Sharma, P.1
Allison, J.P.2
-
77
-
-
84905405443
-
Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
-
Smallwood, S.A., Lee, H.J., Angermueller, C., Krueger, F., Saadeh, H., Peat, J., Andrews, S.R., Stegle, O., Reik, W., Kelsey, G., Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity. Nat. Methods 11 (2014), 817–820.
-
(2014)
Nat. Methods
, vol.11
, pp. 817-820
-
-
Smallwood, S.A.1
Lee, H.J.2
Angermueller, C.3
Krueger, F.4
Saadeh, H.5
Peat, J.6
Andrews, S.R.7
Stegle, O.8
Reik, W.9
Kelsey, G.10
-
78
-
-
84937604921
-
IMMUNOLOGY. An interactive reference framework for modeling a dynamic immune system
-
Spitzer, M.H., Gherardini, P.F., Fragiadakis, G.K., Bhattacharya, N., Yuan, R.T., Hotson, A.N., Finck, R., Carmi, Y., Zunder, E.R., Fantl, W.J., et al. IMMUNOLOGY. An interactive reference framework for modeling a dynamic immune system. Science, 349, 2015, 1259425.
-
(2015)
Science
, vol.349
, pp. 1259425
-
-
Spitzer, M.H.1
Gherardini, P.F.2
Fragiadakis, G.K.3
Bhattacharya, N.4
Yuan, R.T.5
Hotson, A.N.6
Finck, R.7
Carmi, Y.8
Zunder, E.R.9
Fantl, W.J.10
-
79
-
-
84923647450
-
Computational and analytical challenges in single-cell transcriptomics
-
Stegle, O., Teichmann, S.A., Marioni, J.C., Computational and analytical challenges in single-cell transcriptomics. Nat. Rev. Genet. 16 (2015), 133–145.
-
(2015)
Nat. Rev. Genet.
, vol.16
, pp. 133-145
-
-
Stegle, O.1
Teichmann, S.A.2
Marioni, J.C.3
-
80
-
-
0015619335
-
Identification of a novel cell type in peripheral lymphoid organs of mice. I. Morphology, quantitation, tissue distribution
-
Steinman, R.M., Cohn, Z.A., Identification of a novel cell type in peripheral lymphoid organs of mice. I. Morphology, quantitation, tissue distribution. J. Exp. Med. 137 (1973), 1142–1162.
-
(1973)
J. Exp. Med.
, vol.137
, pp. 1142-1162
-
-
Steinman, R.M.1
Cohn, Z.A.2
-
81
-
-
0037036114
-
Dynamic imaging of T cell-dendritic cell interactions in lymph nodes
-
Stoll, S., Delon, J., Brotz, T.M., Germain, R.N., Dynamic imaging of T cell-dendritic cell interactions in lymph nodes. Science 296 (2002), 1873–1876.
-
(2002)
Science
, vol.296
, pp. 1873-1876
-
-
Stoll, S.1
Delon, J.2
Brotz, T.M.3
Germain, R.N.4
-
82
-
-
84908125658
-
Clonal dynamics of native haematopoiesis
-
Sun, J., Ramos, A., Chapman, B., Johnnidis, J.B., Le, L., Ho, Y.J., Klein, A., Hofmann, O., Camargo, F.D., Clonal dynamics of native haematopoiesis. Nature 514 (2014), 322–327.
-
(2014)
Nature
, vol.514
, pp. 322-327
-
-
Sun, J.1
Ramos, A.2
Chapman, B.3
Johnnidis, J.B.4
Le, L.5
Ho, Y.J.6
Klein, A.7
Hofmann, O.8
Camargo, F.D.9
-
83
-
-
85017360311
-
Scaling single-cell genomics from phenomenology to mechanism
-
Tanay, A., Regev, A., Scaling single-cell genomics from phenomenology to mechanism. Nature 541 (2017), 331–338.
-
(2017)
Nature
, vol.541
, pp. 331-338
-
-
Tanay, A.1
Regev, A.2
-
84
-
-
0242551508
-
Metchnikoff and the phagocytosis theory
-
Tauber, A.I., Metchnikoff and the phagocytosis theory. Nat. Rev. Mol. Cell Biol. 4 (2003), 897–901.
-
(2003)
Nat. Rev. Mol. Cell Biol.
, vol.4
, pp. 897-901
-
-
Tauber, A.I.1
-
85
-
-
84963614956
-
Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq
-
Tirosh, I., Izar, B., Prakadan, S.M., Wadsworth, M.H. 2nd, Treacy, D., Trombetta, J.J., Rotem, A., Rodman, C., Lian, C., Murphy, G., et al. Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq. Science 352 (2016), 189–196.
-
(2016)
Science
, vol.352
, pp. 189-196
-
-
Tirosh, I.1
Izar, B.2
Prakadan, S.M.3
Wadsworth, M.H.4
Treacy, D.5
Trombetta, J.J.6
Rotem, A.7
Rodman, C.8
Lian, C.9
Murphy, G.10
-
86
-
-
84900873950
-
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
-
Trapnell, C., Cacchiarelli, D., Grimsby, J., Pokharel, P., Li, S., Morse, M., Lennon, N.J., Livak, K.J., Mikkelsen, T.S., Rinn, J.L., The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells. Nat. Biotechnol. 32 (2014), 381–386.
-
(2014)
Nat. Biotechnol.
, vol.32
, pp. 381-386
-
-
Trapnell, C.1
Cacchiarelli, D.2
Grimsby, J.3
Pokharel, P.4
Li, S.5
Morse, M.6
Lennon, N.J.7
Livak, K.J.8
Mikkelsen, T.S.9
Rinn, J.L.10
-
87
-
-
84900529199
-
Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq
-
Treutlein, B., Brownfield, D.G., Wu, A.R., Neff, N.F., Mantalas, G.L., Espinoza, F.H., Desai, T.J., Krasnow, M.A., Quake, S.R., Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. Nature 509 (2014), 371–375.
-
(2014)
Nature
, vol.509
, pp. 371-375
-
-
Treutlein, B.1
Brownfield, D.G.2
Wu, A.R.3
Neff, N.F.4
Mantalas, G.L.5
Espinoza, F.H.6
Desai, T.J.7
Krasnow, M.A.8
Quake, S.R.9
-
88
-
-
0015276610
-
The mononuclear phagocyte system: a new classification of macrophages, monocytes, and their precursor cells
-
van Furth, R., Cohn, Z.A., Hirsch, J.G., Humphrey, J.H., Spector, W.G., Langevoort, H.L., The mononuclear phagocyte system: a new classification of macrophages, monocytes, and their precursor cells. Bull. World Health Organ. 46 (1972), 845–852.
-
(1972)
Bull. World Health Organ.
, vol.46
, pp. 845-852
-
-
van Furth, R.1
Cohn, Z.A.2
Hirsch, J.G.3
Humphrey, J.H.4
Spector, W.G.5
Langevoort, H.L.6
-
89
-
-
85015695567
-
Human haematopoietic stem cell lineage commitment is a continuous process
-
Velten, L., Haas, S.F., Raffel, S., Blaszkiewicz, S., Islam, S., Hennig, B.P., Hirche, C., Lutz, C., Buss, E.C., Nowak, D., et al. Human haematopoietic stem cell lineage commitment is a continuous process. Nat. Cell Biol. 19 (2017), 271–281.
-
(2017)
Nat. Cell Biol.
, vol.19
, pp. 271-281
-
-
Velten, L.1
Haas, S.F.2
Raffel, S.3
Blaszkiewicz, S.4
Islam, S.5
Hennig, B.P.6
Hirche, C.7
Lutz, C.8
Buss, E.C.9
Nowak, D.10
-
90
-
-
0031570952
-
Dendritic cell subtypes in mouse lymphoid organs: cross-correlation of surface markers, changes with incubation, and differences among thymus, spleen, and lymph nodes
-
Vremec, D., Shortman, K., Dendritic cell subtypes in mouse lymphoid organs: cross-correlation of surface markers, changes with incubation, and differences among thymus, spleen, and lymph nodes. J. Immunol. 159 (1997), 565–573.
-
(1997)
J. Immunol.
, vol.159
, pp. 565-573
-
-
Vremec, D.1
Shortman, K.2
-
91
-
-
84994860357
-
Revealing the vectors of cellular identity with single-cell genomics
-
Wagner, A., Regev, A., Yosef, N., Revealing the vectors of cellular identity with single-cell genomics. Nat. Biotechnol. 34 (2016), 1145–1160.
-
(2016)
Nat. Biotechnol.
, vol.34
, pp. 1145-1160
-
-
Wagner, A.1
Regev, A.2
Yosef, N.3
-
92
-
-
84876800337
-
Macrophage biology in development, homeostasis and disease
-
Wynn, T.A., Chawla, A., Pollard, J.W., Macrophage biology in development, homeostasis and disease. Nature 496 (2013), 445–455.
-
(2013)
Nature
, vol.496
, pp. 445-455
-
-
Wynn, T.A.1
Chawla, A.2
Pollard, J.W.3
-
93
-
-
85041140097
-
-
Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq. 1–8.other
-
Zeisel, A., Manchado, A.B.M., Codeluppi, S., Lönnerberg, P., Manno, G. La, Juréus, A., and Marques, S. (2015). Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq. 1–8.other.
-
(2015)
-
-
Zeisel, A.1
Manchado, A.B.M.2
Codeluppi, S.3
Lönnerberg, P.4
Manno, G.5
La, Juréus, A.6
Marques, S.7
-
94
-
-
85028931659
-
Distinct Mesenchymal Lineages and Niches Promote Epithelial Self-Renewal and Myofibrogenesis in the Lung
-
Zepp, J.A., Zacharias, W.J., Frank, D.B., Cavanaugh, C.A., Zhou, S., Morley, M.P., Morrisey, E.E., Distinct Mesenchymal Lineages and Niches Promote Epithelial Self-Renewal and Myofibrogenesis in the Lung. Cell 170 (2017), 1134–1148.e10.
-
(2017)
Cell
, vol.170
, pp. 1134-1148.e10
-
-
Zepp, J.A.1
Zacharias, W.J.2
Frank, D.B.3
Cavanaugh, C.A.4
Zhou, S.5
Morley, M.P.6
Morrisey, E.E.7
-
95
-
-
84969787245
-
Tracing haematopoietic stem cell formation at single-cell resolution
-
Zhou, F., Li, X., Wang, W., Zhu, P., Zhou, J., He, W., Ding, M., Xiong, F., Zheng, X., Li, Z., et al. Tracing haematopoietic stem cell formation at single-cell resolution. Nature 533 (2016), 1–17.
-
(2016)
Nature
, vol.533
, pp. 1-17
-
-
Zhou, F.1
Li, X.2
Wang, W.3
Zhu, P.4
Zhou, J.5
He, W.6
Ding, M.7
Xiong, F.8
Zheng, X.9
Li, Z.10
|