-
1
-
-
84900314611
-
CRISPR-Cas systems for editing, regulating and targeting genomes
-
Sander JD, Joung JK. CRISPR-Cas systems for editing, regulating and targeting genomes. Nat Biotechnol. 2014;32:347-55.
-
(2014)
Nat Biotechnol
, vol.32
, pp. 347-355
-
-
Sander, J.D.1
Joung, J.K.2
-
2
-
-
84902096048
-
Development and applications of CRISPR-Cas9 for genome engineering
-
Hsu PD, Lander ES, Zhang F. Development and applications of CRISPR-Cas9 for genome engineering. Cell. 2014;157:1262-78.
-
(2014)
Cell
, vol.157
, pp. 1262-1278
-
-
Hsu, P.D.1
Lander, E.S.2
Zhang, F.3
-
3
-
-
84913594397
-
Genome editing. The new frontier of genome engineering with CRISPR-Cas9
-
Doudna JA, Charpentier E. Genome editing. The new frontier of genome engineering with CRISPR-Cas9. Science. 2014;346:1258096.
-
(2014)
Science
, vol.346
, pp. 1258096
-
-
Doudna, J.A.1
Charpentier, E.2
-
4
-
-
84876567971
-
RNA-programmed genome editing in human cells
-
Jinek M, East A, Cheng A, Lin S, Ma E, Doudna J. RNA-programmed genome editing in human cells. Elife. 2013;2:e00471.
-
(2013)
Elife
, vol.2
-
-
Jinek, M.1
East, A.2
Cheng, A.3
Lin, S.4
Ma, E.5
Doudna, J.6
-
5
-
-
78149261827
-
The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA
-
Garneau JE, Dupuis ME, Villion M, Romero DA, Barrangou R, Boyaval P, Fremaux C, Horvath P, Magadan AH, Moineau S. The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature. 2010;468:67-71.
-
(2010)
Nature
, vol.468
, pp. 67-71
-
-
Garneau, J.E.1
Dupuis, M.E.2
Villion, M.3
Romero, D.A.4
Barrangou, R.5
Boyaval, P.6
Fremaux, C.7
Horvath, P.8
Magadan, A.H.9
Moineau, S.10
-
6
-
-
84865070369
-
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
-
Jinek M, Chylinski K, Fonfara I, Hauer M, Doudna JA, Charpentier E. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science. 2012;337:816-21.
-
(2012)
Science
, vol.337
, pp. 816-821
-
-
Jinek, M.1
Chylinski, K.2
Fonfara, I.3
Hauer, M.4
Doudna, J.A.5
Charpentier, E.6
-
7
-
-
84873734105
-
RNA-guided human genome engineering via Cas9
-
Mali P, Yang L, Esvelt KM, Aach J, Guell M, DiCarlo JE, Norville JE, Church GM. RNA-guided human genome engineering via Cas9. Science. 2013;339:823-6.
-
(2013)
Science
, vol.339
, pp. 823-826
-
-
Mali, P.1
Yang, L.2
Esvelt, K.M.3
Aach, J.4
Guell, M.5
DiCarlo, J.E.6
Norville, J.E.7
Church, G.M.8
-
8
-
-
84873729095
-
Multiplex genome engineering using CRISPR/Cas systems
-
Cong L, Ran FA, Cox D, Lin S, Barretto R, Habib N, Hsu PD, Wu X, Jiang W, Marraffini LA, Zhang F. Multiplex genome engineering using CRISPR/Cas systems. Science. 2013;339:819-23.
-
(2013)
Science
, vol.339
, pp. 819-823
-
-
Cong, L.1
Ran, F.A.2
Cox, D.3
Lin, S.4
Barretto, R.5
Habib, N.6
Hsu, P.D.7
Wu, X.8
Jiang, W.9
Marraffini, L.A.10
Zhang, F.11
-
9
-
-
84908508061
-
Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease
-
Anders C, Niewoehner O, Duerst A, Jinek M. Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease. Nature. 2014;513:569-73.
-
(2014)
Nature
, vol.513
, pp. 569-573
-
-
Anders, C.1
Niewoehner, O.2
Duerst, A.3
Jinek, M.4
-
10
-
-
84962514403
-
Structural Plasticity of PAM Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9
-
Anders C, Bargsten K, Jinek M. Structural Plasticity of PAM Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9. Mol Cell. 2016;61:895-902.
-
(2016)
Mol Cell
, vol.61
, pp. 895-902
-
-
Anders, C.1
Bargsten, K.2
Jinek, M.3
-
11
-
-
84933574487
-
Structural biology: a Cas9-guide RNA complex preorganized for target DNA recognition
-
Jiang F, Zhou K, Ma L, Gressel S, Doudna JA. Structural biology: a Cas9-guide RNA complex preorganized for target DNA recognition. Science. 2015;348:1477-81.
-
(2015)
Science
, vol.348
, pp. 1477-1481
-
-
Jiang, F.1
Zhou, K.2
Ma, L.3
Gressel, S.4
Doudna, J.A.5
-
12
-
-
84893157352
-
Structures of Cas9 endonucleases reveal RNA-mediated conformational activation
-
Jinek M, Jiang F, Taylor DW, Sternberg SH, Kaya E, Ma E, Anders C, Hauer M, Zhou K, Lin S, et al. Structures of Cas9 endonucleases reveal RNA-mediated conformational activation. Science. 2014;343:1247997.
-
(2014)
Science
, vol.343
, pp. 1247997
-
-
Jinek, M.1
Jiang, F.2
Taylor, D.W.3
Sternberg, S.H.4
Kaya, E.5
Ma, E.6
Anders, C.7
Hauer, M.8
Zhou, K.9
Lin, S.10
-
13
-
-
84896733529
-
Crystal structure of Cas9 in complex with guide RNA and target DNA
-
Nishimasu H, Ran FA, Hsu PD, Konermann S, Shehata SI, Dohmae N, Ishitani R, Zhang F, Nureki O. Crystal structure of Cas9 in complex with guide RNA and target DNA. Cell. 2014;156:935-49.
-
(2014)
Cell
, vol.156
, pp. 935-949
-
-
Nishimasu, H.1
Ran, F.A.2
Hsu, P.D.3
Konermann, S.4
Shehata, S.I.5
Dohmae, N.6
Ishitani, R.7
Zhang, F.8
Nureki, O.9
-
14
-
-
84884165315
-
DNA targeting specificity of RNA-guided Cas9 nucleases
-
Hsu PD, Scott DA, Weinstein JA, Ran FA, Konermann S, Agarwala V, Li Y, Fine EJ, Wu X, Shalem O, et al. DNA targeting specificity of RNA-guided Cas9 nucleases. Nat Biotechnol. 2013;31:827-32.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 827-832
-
-
Hsu, P.D.1
Scott, D.A.2
Weinstein, J.A.3
Ran, F.A.4
Konermann, S.5
Agarwala, V.6
Li, Y.7
Fine, E.J.8
Wu, X.9
Shalem, O.10
-
15
-
-
84880570576
-
High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells
-
Fu Y, Foden JA, Khayter C, Maeder ML, Reyon D, Joung JK, Sander JD. High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells. Nat Biotechnol. 2013;31:822-6.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 822-826
-
-
Fu, Y.1
Foden, J.A.2
Khayter, C.3
Maeder, M.L.4
Reyon, D.5
Joung, J.K.6
Sander, J.D.7
-
16
-
-
84884155038
-
High-throughput profiling of off-target DNA cleavage reveals RNA-programmed Cas9 nuclease specificity
-
Pattanayak V, Lin S, Guilinger JP, Ma E, Doudna JA, Liu DR. High-throughput profiling of off-target DNA cleavage reveals RNA-programmed Cas9 nuclease specificity. Nat Biotechnol. 2013;31:839-43.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 839-843
-
-
Pattanayak, V.1
Lin, S.2
Guilinger, J.P.3
Ma, E.4
Doudna, J.A.5
Liu, D.R.6
-
17
-
-
84884950106
-
CRISPR/Cas9 systems targeting beta-globin and CCR5 genes have substantial off-target activity
-
Cradick TJ, Fine EJ, Antico CJ, Bao G. CRISPR/Cas9 systems targeting beta-globin and CCR5 genes have substantial off-target activity. Nucleic Acids Res. 2013;41:9584-92.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 9584-9592
-
-
Cradick, T.J.1
Fine, E.J.2
Antico, C.J.3
Bao, G.4
-
18
-
-
84923266604
-
GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases
-
Tsai SQ, Zheng Z, Nguyen NT, Liebers M, Topkar VV, Thapar V, Wyvekens N, Khayter C, Iafrate AJ, Le LP, et al. GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases. Nat Biotechnol. 2015;33:187-97.
-
(2015)
Nat Biotechnol
, vol.33
, pp. 187-197
-
-
Tsai, S.Q.1
Zheng, Z.2
Nguyen, N.T.3
Liebers, M.4
Topkar, V.V.5
Thapar, V.6
Wyvekens, N.7
Khayter, C.8
Iafrate, A.J.9
Le, L.P.10
-
19
-
-
84923275611
-
Genome-wide detection of DNA double-stranded breaks induced by engineered nucleases
-
Frock RL, Hu J, Meyers RM, Ho YJ, Kii E, Alt FW. Genome-wide detection of DNA double-stranded breaks induced by engineered nucleases. Nat Biotechnol. 2015;33:179-86.
-
(2015)
Nat Biotechnol
, vol.33
, pp. 179-186
-
-
Frock, R.L.1
Hu, J.2
Meyers, R.M.3
Ho, Y.J.4
Kii, E.5
Alt, F.W.6
-
20
-
-
84923221641
-
Unbiased detection of off-target cleavage by CRISPR-Cas9 and TALENs using integrase-defective lentiviral vectors
-
Wang X, Wang Y, Wu X, Wang J, Wang Y, Qiu Z, Chang T, Huang H, Lin RJ, Yee JK. Unbiased detection of off-target cleavage by CRISPR-Cas9 and TALENs using integrase-defective lentiviral vectors. Nat Biotechnol. 2015;33:175-8.
-
(2015)
Nat Biotechnol
, vol.33
, pp. 175-178
-
-
Wang, X.1
Wang, Y.2
Wu, X.3
Wang, J.4
Wang, Y.5
Qiu, Z.6
Chang, T.7
Huang, H.8
Lin, R.J.9
Yee, J.K.10
-
21
-
-
84891710947
-
Analysis of off-target effects of CRISPR/Cas-derived RNA-guided endonucleases and nickases
-
Cho SW, Kim S, Kim Y, Kweon J, Kim HS, Bae S, Kim JS. Analysis of off-target effects of CRISPR/Cas-derived RNA-guided endonucleases and nickases. Genome Res. 2014;24:132-41.
-
(2014)
Genome Res
, vol.24
, pp. 132-141
-
-
Cho, S.W.1
Kim, S.2
Kim, Y.3
Kweon, J.4
Kim, H.S.5
Bae, S.6
Kim, J.S.7
-
22
-
-
84964253170
-
Defining and improving the genome-wide specificities of CRISPR-Cas9 nucleases
-
Tsai SQ, Joung JK. Defining and improving the genome-wide specificities of CRISPR-Cas9 nucleases. Nat Rev Genet. 2016;17:300-12.
-
(2016)
Nat Rev Genet
, vol.17
, pp. 300-312
-
-
Tsai, S.Q.1
Joung, J.K.2
-
23
-
-
84896929630
-
Improving CRISPR-Cas nuclease specificity using truncated guide RNAs
-
Fu Y, Sander JD, Reyon D, Cascio VM, Joung JK. Improving CRISPR-Cas nuclease specificity using truncated guide RNAs. Nat Biotechnol. 2014;32:279-84.
-
(2014)
Nat Biotechnol
, vol.32
, pp. 279-284
-
-
Fu, Y.1
Sander, J.D.2
Reyon, D.3
Cascio, V.M.4
Joung, J.K.5
-
24
-
-
84923297110
-
A split-Cas9 architecture for inducible genome editing and transcription modulation
-
Zetsche B, Volz SE, Zhang F. A split-Cas9 architecture for inducible genome editing and transcription modulation. Nat Biotechnol. 2015;33:139-42.
-
(2015)
Nat Biotechnol
, vol.33
, pp. 139-142
-
-
Zetsche, B.1
Volz, S.E.2
Zhang, F.3
-
25
-
-
84937764361
-
Small molecule-triggered Cas9 protein with improved genome-editing specificity
-
Davis KM, Pattanayak V, Thompson DB, Zuris JA, Liu DR. Small molecule-triggered Cas9 protein with improved genome-editing specificity. Nat Chem Biol. 2015;11:316-8.
-
(2015)
Nat Chem Biol
, vol.11
, pp. 316-318
-
-
Davis, K.M.1
Pattanayak, V.2
Thompson, D.B.3
Zuris, J.A.4
Liu, D.R.5
-
26
-
-
84937908208
-
Engineered CRISPR-Cas9 nucleases with altered PAM specificities
-
Kleinstiver BP, Prew MS, Tsai SQ, Topkar VV, Nguyen NT, Zheng Z, Gonzales AP, Li Z, Peterson RT, Yeh JR, et al. Engineered CRISPR-Cas9 nucleases with altered PAM specificities. Nature. 2015;523:481-5.
-
(2015)
Nature
, vol.523
, pp. 481-485
-
-
Kleinstiver, B.P.1
Prew, M.S.2
Tsai, S.Q.3
Topkar, V.V.4
Nguyen, N.T.5
Zheng, Z.6
Gonzales, A.P.7
Li, Z.8
Peterson, R.T.9
Yeh, J.R.10
-
27
-
-
84884288934
-
Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity
-
Ran FA, Hsu PD, Lin CY, Gootenberg JS, Konermann S, Trevino AE, Scott DA, Inoue A, Matoba S, Zhang Y, Zhang F. Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. Cell. 2013;154:1380-9.
-
(2013)
Cell
, vol.154
, pp. 1380-1389
-
-
Ran, F.A.1
Hsu, P.D.2
Lin, C.Y.3
Gootenberg, J.S.4
Konermann, S.5
Trevino, A.E.6
Scott, D.A.7
Inoue, A.8
Matoba, S.9
Zhang, Y.10
Zhang, F.11
-
28
-
-
84884160273
-
CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering
-
Mali P, Aach J, Stranges PB, Esvelt KM, Moosburner M, Kosuri S, Yang L, Church GM. CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering. Nat Biotechnol. 2013;31:833-8.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 833-838
-
-
Mali, P.1
Aach, J.2
Stranges, P.B.3
Esvelt, K.M.4
Moosburner, M.5
Kosuri, S.6
Yang, L.7
Church, G.M.8
-
29
-
-
84902204289
-
Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing
-
Tsai SQ, Wyvekens N, Khayter C, Foden JA, Thapar V, Reyon D, Goodwin MJ, Aryee MJ, Joung JK. Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing. Nat Biotechnol. 2014;32:569-76.
-
(2014)
Nat Biotechnol
, vol.32
, pp. 569-576
-
-
Tsai, S.Q.1
Wyvekens, N.2
Khayter, C.3
Foden, J.A.4
Thapar, V.5
Reyon, D.6
Goodwin, M.J.7
Aryee, M.J.8
Joung, J.K.9
-
30
-
-
84902210542
-
Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genome modification
-
Guilinger JP, Thompson DB, Liu DR. Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genome modification. Nat Biotechnol. 2014;32:577-82.
-
(2014)
Nat Biotechnol
, vol.32
, pp. 577-582
-
-
Guilinger, J.P.1
Thompson, D.B.2
Liu, D.R.3
-
31
-
-
84937575600
-
Dimeric CRISPR RNA-guided FokI-dCas9 nucleases directed by truncated gRNAs for highly specific genome editing
-
Wyvekens N, Topkar VV, Khayter C, Joung JK, Tsai SQ. Dimeric CRISPR RNA-guided FokI-dCas9 nucleases directed by truncated gRNAs for highly specific genome editing. Hum Gene Ther. 2015;26:425-31.
-
(2015)
Hum Gene Ther
, vol.26
, pp. 425-431
-
-
Wyvekens, N.1
Topkar, V.V.2
Khayter, C.3
Joung, J.K.4
Tsai, S.Q.5
-
32
-
-
84952943845
-
Rationally engineered Cas9 nucleases with improved specificity
-
Slaymaker IM, Gao L, Zetsche B, Scott DA, Yan WX, Zhang F. Rationally engineered Cas9 nucleases with improved specificity. Science. 2016;351:84-8.
-
(2016)
Science
, vol.351
, pp. 84-88
-
-
Slaymaker, I.M.1
Gao, L.2
Zetsche, B.3
Scott, D.A.4
Yan, W.X.5
Zhang, F.6
-
33
-
-
84963941043
-
High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects
-
Kleinstiver BP, Pattanayak V, Prew MS, Tsai SQ, Nguyen NT, Zheng Z, Joung JK. High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects. Nature. 2016;529:490-5.
-
(2016)
Nature
, vol.529
, pp. 490-495
-
-
Kleinstiver, B.P.1
Pattanayak, V.2
Prew, M.S.3
Tsai, S.Q.4
Nguyen, N.T.5
Zheng, Z.6
Joung, J.K.7
-
34
-
-
84875754465
-
Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing
-
Crosetto N, Mitra A, Silva MJ, Bienko M, Dojer N, Wang Q, Karaca E, Chiarle R, Skrzypczak M, Ginalski K, et al. Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing. Nat Methods. 2013;10:361-5.
-
(2013)
Nat Methods
, vol.10
, pp. 361-365
-
-
Crosetto, N.1
Mitra, A.2
Silva, M.J.3
Bienko, M.4
Dojer, N.5
Wang, Q.6
Karaca, E.7
Chiarle, R.8
Skrzypczak, M.9
Ginalski, K.10
-
35
-
-
84987707885
-
Cpf1 nucleases demonstrate robust activity to induce DNA modification by exploiting homology directed repair pathways in mammalian cells
-
Tóth E, Weinhardt N, Bencsura P, Huszár K, Kulcsár PI, Tálas A, Fodor E, Welker E. Cpf1 nucleases demonstrate robust activity to induce DNA modification by exploiting homology directed repair pathways in mammalian cells. Biol Direct. 2016;11:46.
-
(2016)
Biol Direct
, vol.11
, pp. 46
-
-
Tóth, E.1
Weinhardt, N.2
Bencsura, P.3
Huszár, K.4
Kulcsár, P.I.5
Tálas, A.6
Fodor, E.7
Welker, E.8
-
36
-
-
84917725056
-
Easy quantitative assessment of genome editing by sequence trace decomposition
-
Brinkman EK, Chen T, Amendola M, van Steensel B. Easy quantitative assessment of genome editing by sequence trace decomposition. Nucleic Acids Res. 2014;42:e168.
-
(2014)
Nucleic Acids Res
, vol.42
-
-
Brinkman, E.K.1
Chen, T.2
Amendola, M.3
Steensel, B.4
-
37
-
-
0026698877
-
The transcriptional start site for a human U6 small nuclear RNA gene is dictated by a compound promoter element consisting of the PSE and the TATA box
-
Goomer RS, Kunkel GR. The transcriptional start site for a human U6 small nuclear RNA gene is dictated by a compound promoter element consisting of the PSE and the TATA box. Nucleic Acids Res. 1992;20:4903-12.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 4903-4912
-
-
Goomer, R.S.1
Kunkel, G.R.2
-
38
-
-
84860747716
-
FLASH assembly of TALENs for high-throughput genome editing
-
Reyon D, Tsai SQ, Khayter C, Foden JA, Sander JD, Joung JK. FLASH assembly of TALENs for high-throughput genome editing. Nat Biotechnol. 2012;30:460-5.
-
(2012)
Nat Biotechnol
, vol.30
, pp. 460-465
-
-
Reyon, D.1
Tsai, S.Q.2
Khayter, C.3
Foden, J.A.4
Sander, J.D.5
Joung, J.K.6
-
39
-
-
77956498326
-
Sequence- and structure-specific RNA processing by a CRISPR endonuclease
-
Haurwitz RE, Jinek M, Wiedenheft B, Zhou K, Doudna JA. Sequence- and structure-specific RNA processing by a CRISPR endonuclease. Science. 2010;329:1355-8.
-
(2010)
Science
, vol.329
, pp. 1355-1358
-
-
Haurwitz, R.E.1
Jinek, M.2
Wiedenheft, B.3
Zhou, K.4
Doudna, J.A.5
-
40
-
-
84925262435
-
Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system
-
Xie K, Minkenberg B, Yang Y. Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system. Proc Natl Acad Sci U S A. 2015;112:3570-5.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 3570-3575
-
-
Xie, K.1
Minkenberg, B.2
Yang, Y.3
-
41
-
-
85016604142
-
Striking plasticity of CRISPR-Cas9 and key role of non-target DNA, as revealed by molecular simulations
-
Palermo G, Miao Y, Walker RC, Jinek M, McCammon JA. Striking plasticity of CRISPR-Cas9 and key role of non-target DNA, as revealed by molecular simulations. ACS Cent Sci. 2016;2:756-63.
-
(2016)
ACS Cent Sci
, vol.2
, pp. 756-763
-
-
Palermo, G.1
Miao, Y.2
Walker, R.C.3
Jinek, M.4
McCammon, J.A.5
-
42
-
-
84897546295
-
Self-processing of ribozyme-flanked RNAs into guide RNAs in vitro and in vivo for CRISPR-mediated genome editing
-
Gao YB, Zhao YD. Self-processing of ribozyme-flanked RNAs into guide RNAs in vitro and in vivo for CRISPR-mediated genome editing. J Integr Plant Biol. 2014;56:343-9.
-
(2014)
J Integr Plant Biol
, vol.56
, pp. 343-349
-
-
Gao, Y.B.1
Zhao, Y.D.2
-
43
-
-
84994438028
-
Ribozyme mediated gRNA generation for in vitro and in vivo CRISPR/Cas9 mutagenesis
-
Lee RTH, Ng ASM, Ingham PW. Ribozyme mediated gRNA generation for in vitro and in vivo CRISPR/Cas9 mutagenesis. Plos One. 2016;11:e0166020.
-
(2016)
Plos One
, vol.11
-
-
Lee, R.T.H.1
Ng, A.S.M.2
Ingham, P.W.3
-
44
-
-
84926521955
-
Highly efficient Cas9-mediated transcriptional programming
-
Chavez A, Scheiman J, Vora S, Pruitt BW, Tuttle M, PRI E, Lin S, Kiani S, Guzman CD, Wiegand DJ, et al. Highly efficient Cas9-mediated transcriptional programming. Nat Methods. 2015;12:326-8.
-
(2015)
Nat Methods
, vol.12
, pp. 326-328
-
-
Chavez, A.1
Scheiman, J.2
Vora, S.3
Pruitt, B.W.4
Tuttle, M.5
Lin, S.6
Kiani, S.7
Guzman, C.D.8
Wiegand, D.J.9
-
45
-
-
84880571335
-
CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes
-
Gilbert LA, Larson MH, Morsut L, Liu Z, Brar GA, Torres SE, Stern-Ginossar N, Brandman O, Whitehead EH, Doudna JA, et al. CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes. Cell. 2013;154:442-51.
-
(2013)
Cell
, vol.154
, pp. 442-451
-
-
Gilbert, L.A.1
Larson, M.H.2
Morsut, L.3
Liu, Z.4
Brar, G.A.5
Torres, S.E.6
Stern-Ginossar, N.7
Brandman, O.8
Whitehead, E.H.9
Doudna, J.A.10
-
46
-
-
84884906690
-
RNA-guided gene activation by CRISPR-Cas9-based transcription factors
-
Perez-Pinera P, Kocak DD, Vockley CM, Adler AF, Kabadi AM, Polstein LR, Thakore PI, Glass KA, Ousterout DG, Leong KW, et al. RNA-guided gene activation by CRISPR-Cas9-based transcription factors. Nat Methods. 2013;10:973-6.
-
(2013)
Nat Methods
, vol.10
, pp. 973-976
-
-
Perez-Pinera, P.1
Kocak, D.D.2
Vockley, C.M.3
Adler, A.F.4
Kabadi, A.M.5
Polstein, L.R.6
Thakore, P.I.7
Glass, K.A.8
Ousterout, D.G.9
Leong, K.W.10
-
47
-
-
84884907424
-
CRISPR RNA-guided activation of endogenous human genes
-
Maeder ML, Linder SJ, Cascio VM, Fu Y, Ho QH, Joung JK. CRISPR RNA-guided activation of endogenous human genes. Nat Methods. 2013;10:977-9.
-
(2013)
Nat Methods
, vol.10
, pp. 977-979
-
-
Maeder, M.L.1
Linder, S.J.2
Cascio, V.M.3
Fu, Y.4
Ho, Q.H.5
Joung, J.K.6
-
48
-
-
84969791285
-
Comparison of Cas9 activators in multiple species
-
Chavez A, Tuttle M, Pruitt BW, Ewen-Campen B, Chari R, Ter-Ovanesyan D, Haque SJ, Cecchi RJ, Kowal EJ, Buchthal J, et al. Comparison of Cas9 activators in multiple species. Nat Methods. 2016;13:563-7.
-
(2016)
Nat Methods
, vol.13
, pp. 563-567
-
-
Chavez, A.1
Tuttle, M.2
Pruitt, B.W.3
Ewen-Campen, B.4
Chari, R.5
Ter-Ovanesyan, D.6
Haque, S.J.7
Cecchi, R.J.8
Kowal, E.J.9
Buchthal, J.10
-
49
-
-
84908352138
-
Genome-scale CRISPR-mediated control of gene repression and activation
-
Gilbert LA, Horlbeck MA, Adamson B, Villalta JE, Chen Y, Whitehead EH, Guimaraes C, Panning B, Ploegh HL, Bassik MC, et al. Genome-scale CRISPR-mediated control of gene repression and activation. Cell. 2014;159:647-61.
-
(2014)
Cell
, vol.159
, pp. 647-661
-
-
Gilbert, L.A.1
Horlbeck, M.A.2
Adamson, B.3
Villalta, J.E.4
Chen, Y.5
Whitehead, E.H.6
Guimaraes, C.7
Panning, B.8
Ploegh, H.L.9
Bassik, M.C.10
-
50
-
-
84874687019
-
Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
-
Qi LS, Larson MH, Gilbert LA, Doudna JA, Weissman JS, Arkin AP, Lim WA. Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell. 2013;152:1173-83.
-
(2013)
Cell
, vol.152
, pp. 1173-1183
-
-
Qi, L.S.1
Larson, M.H.2
Gilbert, L.A.3
Doudna, J.A.4
Weissman, J.S.5
Arkin, A.P.6
Lim, W.A.7
-
51
-
-
84923096541
-
Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex
-
Konermann S, Brigham MD, Trevino AE, Joung J, Abudayyeh OO, Barcena C, Hsu PD, Habib N, Gootenberg JS, Nishimasu H, et al. Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex. Nature. 2015;517:583-8.
-
(2015)
Nature
, vol.517
, pp. 583-588
-
-
Konermann, S.1
Brigham, M.D.2
Trevino, A.E.3
Joung, J.4
Abudayyeh, O.O.5
Barcena, C.6
Hsu, P.D.7
Habib, N.8
Gootenberg, J.S.9
Nishimasu, H.10
-
52
-
-
84946471431
-
Cas9 gRNA engineering for genome editing, activation and repression
-
Kiani S, Chavez A, Tuttle M, Hall RN, Chari R, Ter-Ovanesyan D, Qian J, Pruitt BW, Beal J, Vora S, et al. Cas9 gRNA engineering for genome editing, activation and repression. Nat Methods. 2015;12:1051-4.
-
(2015)
Nat Methods
, vol.12
, pp. 1051-1054
-
-
Kiani, S.1
Chavez, A.2
Tuttle, M.3
Hall, R.N.4
Chari, R.5
Ter-Ovanesyan, D.6
Qian, J.7
Pruitt, B.W.8
Beal, J.9
Vora, S.10
-
53
-
-
84947225411
-
Orthogonal gene knockout and activation with a catalytically active Cas9 nuclease
-
Dahlman JE, Abudayyeh OO, Joung J, Gootenberg JS, Zhang F, Konermann S. Orthogonal gene knockout and activation with a catalytically active Cas9 nuclease. Nat Biotechnol. 2015;33:1159-61.
-
(2015)
Nat Biotechnol
, vol.33
, pp. 1159-1161
-
-
Dahlman, J.E.1
Abudayyeh, O.O.2
Joung, J.3
Gootenberg, J.S.4
Zhang, F.5
Konermann, S.6
-
54
-
-
84926652112
-
Inducible in vivo genome editing with CRISPR-Cas9
-
Dow LE, Fisher J, O'Rourke KP, Muley A, Kastenhuber ER, Livshits G, Tschaharganeh DF, Socci ND, Lowe SW. Inducible in vivo genome editing with CRISPR-Cas9. Nat Biotechnol. 2015;33:390-U398.
-
(2015)
Nat Biotechnol
, vol.33
, pp. 390-U398
-
-
Dow, L.E.1
Fisher, J.2
O'Rourke, K.P.3
Muley, A.4
Kastenhuber, E.R.5
Livshits, G.6
Tschaharganeh, D.F.7
Socci, N.D.8
Lowe, S.W.9
-
56
-
-
84987678200
-
A chemical-inducible CRISPR-Cas9 system for rapid control of genome editing
-
Liu KI, Ramli MNB, Woo CWA, Wang YM, Zhao TY, Zhang XJ, Yim GRD, Chong BY, Gowher A, Chua MZH, et al. A chemical-inducible CRISPR-Cas9 system for rapid control of genome editing. Nat Chem Biol. 2016;12:980.
-
(2016)
Nat Chem Biol
, vol.12
, pp. 980
-
-
Liu, K.I.1
Ramli, M.N.B.2
Woo, C.W.A.3
Wang, Y.M.4
Zhao, T.Y.5
Zhang, X.J.6
Yim, G.R.D.7
Chong, B.Y.8
Gowher, A.9
Chua, M.Z.H.10
-
57
-
-
84924322574
-
Rational design of a split-Cas9 enzyme complex
-
Wright AV, Sternberg SH, Taylor DW, Staahl BT, Bardales JA, Kornfeld JE, Doudna JA. Rational design of a split-Cas9 enzyme complex. Proc Natl Acad Sci U S A. 2015;112:2984-9.
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 2984-2989
-
-
Wright, A.V.1
Sternberg, S.H.2
Taylor, D.W.3
Staahl, B.T.4
Bardales, J.A.5
Kornfeld, J.E.6
Doudna, J.A.7
-
58
-
-
84961288301
-
Cationic lipid-mediated delivery of proteins enables efficient protein-based genome editing in vitro and in vivo
-
Zuris JA, Thompson DB, Shu Y, Guilinger JP, Bessen JL, Hu JH, Maeder ML, Joung JK, Chen ZY, Liu DR. Cationic lipid-mediated delivery of proteins enables efficient protein-based genome editing in vitro and in vivo. Nat Biotechnol. 2015;33:73-80.
-
(2015)
Nat Biotechnol
, vol.33
, pp. 73-80
-
-
Zuris, J.A.1
Thompson, D.B.2
Shu, Y.3
Guilinger, J.P.4
Bessen, J.L.5
Hu, J.H.6
Maeder, M.L.7
Joung, J.K.8
Chen, Z.Y.9
Liu, D.R.10
-
59
-
-
84901834420
-
Highly efficient RNA-guided genome editing in human cells via delivery of purified Cas9 ribonucleoproteins
-
Kim S, Kim D, Cho SW, Kim J, Kim JS. Highly efficient RNA-guided genome editing in human cells via delivery of purified Cas9 ribonucleoproteins. Genome Res. 2014;24:1012-9.
-
(2014)
Genome Res
, vol.24
, pp. 1012-1019
-
-
Kim, S.1
Kim, D.2
Cho, S.W.3
Kim, J.4
Kim, J.S.5
-
60
-
-
84958953000
-
Structures of a CRISPR-Cas9 R-loop complex primed for DNA cleavage
-
Jiang FG, Taylor DW, Chen JS, Kornfeld JE, Zhou KH, Thompson AJ, Nogales E, Doudna JA. Structures of a CRISPR-Cas9 R-loop complex primed for DNA cleavage. Science. 2016;351:867-71.
-
(2016)
Science
, vol.351
, pp. 867-871
-
-
Jiang, F.G.1
Taylor, D.W.2
Chen, J.S.3
Kornfeld, J.E.4
Zhou, K.H.5
Thompson, A.J.6
Nogales, E.7
Doudna, J.A.8
-
61
-
-
0034652141
-
Positive and negative regulation of endogenous genes by designed transcription factors
-
Beerli RR, Dreier B, Barbas 3rd CF. Positive and negative regulation of endogenous genes by designed transcription factors. Proc Natl Acad Sci U S A. 2000;97:1495-500.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 1495-1500
-
-
Beerli, R.R.1
Dreier, B.2
Barbas, C.F.3
-
62
-
-
80052293623
-
Revealing off-target cleavage specificities of zinc-finger nucleases by in vitro selection
-
Pattanayak V, Ramirez CL, Joung JK, Liu DR. Revealing off-target cleavage specificities of zinc-finger nucleases by in vitro selection. Nat Methods. 2011;8:765-70.
-
(2011)
Nat Methods
, vol.8
, pp. 765-770
-
-
Pattanayak, V.1
Ramirez, C.L.2
Joung, J.K.3
Liu, D.R.4
-
63
-
-
56649114274
-
A one pot, one step, precision cloning method with high throughput capability
-
Engler C, Kandzia R, Marillonnet S. A one pot, one step, precision cloning method with high throughput capability. PLoS One. 2008;3:e3647.
-
(2008)
PLoS One
, vol.3
-
-
Engler, C.1
Kandzia, R.2
Marillonnet, S.3
-
64
-
-
84945237195
-
Cloning should be simple: Escherichia coli DH5 alpha-mediated assembly of multiple DNA fragments with short end homologies
-
Kostylev M, Otwell AE, Richardson RE, Suzuki Y. Cloning should be simple: Escherichia coli DH5 alpha-mediated assembly of multiple DNA fragments with short end homologies. PLoS One. 2015;10:e0137466.
-
(2015)
PLoS One
, vol.10
-
-
Kostylev, M.1
Otwell, A.E.2
Richardson, R.E.3
Suzuki, Y.4
-
65
-
-
84897474204
-
Restriction enzyme body doubles and PCR cloning: on the general use of type IIs restriction enzymes for cloning
-
Tóth E, Huszár K, Bencsura P, Kulcsár PI, Vodicska B, Nyeste A, Welker Z, Tóth S, Welker E. Restriction enzyme body doubles and PCR cloning: on the general use of type IIs restriction enzymes for cloning. PLoS One. 2014;9:e90896.
-
(2014)
PLoS One
, vol.9
-
-
Tóth, E.1
Huszár, K.2
Bencsura, P.3
Kulcsár, P.I.4
Vodicska, B.5
Nyeste, A.6
Welker, Z.7
Tóth, S.8
Welker, E.9
-
66
-
-
85030696088
-
A convenient method to pre-screen candidate guide RNAs for CRISPR/Cas9 gene editing by NHEJ-mediated integration of a 'self-cleaving' GFP-expression plasmid
-
Talas A, Kulcsar PI, Weinhardt N, Borsy A, Toth E, Szebenyi K, Krausz SL, Huszar K, Vida I, Sturm A, et al. A convenient method to pre-screen candidate guide RNAs for CRISPR/Cas9 gene editing by NHEJ-mediated integration of a 'self-cleaving' GFP-expression plasmid. DNA Res. 2017. doi: 10.1093/dnares/dsx029.
-
(2017)
DNA Res.
-
-
Talas, A.1
Kulcsar, P.I.2
Weinhardt, N.3
Borsy, A.4
Toth, E.5
Szebenyi, K.6
Krausz, S.L.7
Huszar, K.8
Vida, I.9
Sturm, A.10
|