메뉴 건너뛰기




Volumn 523, Issue 7561, 2015, Pages 481-485

Engineered CRISPR-Cas9 nucleases with altered PAM specificities

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ENZYME; CAS 9 PROTEIN; CRISPR ASSOCIATED PROTEIN; UNCLASSIFIED DRUG;

EID: 84937908208     PISSN: 00280836     EISSN: 14764687     Source Type: Journal    
DOI: 10.1038/nature14592     Document Type: Article
Times cited : (1328)

References (36)
  • 1
    • 84900314611 scopus 로고    scopus 로고
    • CRISPR-Cas systems for editing, regulating and targeting genomes
    • Sander, J. D. & Joung, J. K. CRISPR-Cas systems for editing, regulating and targeting genomes. Nature Biotechnol. 32, 347-355 (2014).
    • (2014) Nature Biotechnol. , vol.32 , pp. 347-355
    • Sander, J.D.1    Joung, J.K.2
  • 2
    • 84913594397 scopus 로고    scopus 로고
    • Genome editing. The new frontier of genome engineering with CRISPR-Cas9
    • Doudna, J. A. & Charpentier, E. Genome editing. The new frontier of genome engineering with CRISPR-Cas9. Science 346, 1258096 (2014).
    • (2014) Science , vol.346 , pp. 1258096
    • Doudna, J.A.1    Charpentier, E.2
  • 3
    • 64049118040 scopus 로고    scopus 로고
    • Short motif sequences determine the targets of the prokaryotic CRISPR defence system
    • Mojica, F. J., Diez-Villasenor, C., Garcia-Martinez, J. & Almendros, C. Short motif sequences determine the targets of the prokaryotic CRISPR defence system. Microbiology 155, 733-740 (2009).
    • (2009) Microbiology , vol.155 , pp. 733-740
    • Mojica, F.J.1    Diez-Villasenor, C.2    Garcia-Martinez, J.3    Almendros, C.4
  • 4
    • 84879026965 scopus 로고    scopus 로고
    • Protospacer recognitionmotifs: Mixed identities and functional diversity
    • Shah, S. A., Erdmann, S., Mojica, F. J. & Garrett, R.A. Protospacer recognitionmotifs: mixed identities and functional diversity. RNA Biol. 10, 891-899 (2013).
    • (2013) RNA Biol. , vol.10 , pp. 891-899
    • Shah, S.A.1    Erdmann, S.2    Mojica, F.J.3    Garrett, R.A.4
  • 5
    • 84865070369 scopus 로고    scopus 로고
    • A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
    • Jinek, M. et al. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 337, 816-821 (2012).
    • (2012) Science , vol.337 , pp. 816-821
    • Jinek, M.1
  • 6
    • 84895871173 scopus 로고    scopus 로고
    • DNA interrogation by the CRISPR RNA-guided endonuclease Cas9
    • Sternberg, S. H., Redding, S., Jinek, M., Greene, E. C. & Doudna, J. A. DNA interrogation by the CRISPR RNA-guided endonuclease Cas9. Nature 507, 62-67 (2014).
    • (2014) Nature , vol.507 , pp. 62-67
    • Sternberg, S.H.1    Redding, S.2    Jinek, M.3    Greene, E.C.4    Doudna, J.A.5
  • 7
    • 84923266604 scopus 로고    scopus 로고
    • GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases
    • Tsai, S. Q. et al. GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases. Nature Biotechnol. 33, 187-197 (2015).
    • (2015) Nature Biotechnol. , vol.33 , pp. 187-197
    • Tsai, S.Q.1
  • 8
    • 84874608929 scopus 로고    scopus 로고
    • RNA-guided editing of bacterial genomes using CRISPR-Cas systems
    • Jiang, W., Bikard, D., Cox, D., Zhang, F. & Marraffini, L. A. RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nature Biotechnol. 31, 233-239 (2013).
    • (2013) Nature Biotechnol. , vol.31 , pp. 233-239
    • Jiang, W.1    Bikard, D.2    Cox, D.3    Zhang, F.4    Marraffini, L.A.5
  • 9
    • 84885157177 scopus 로고    scopus 로고
    • Optimization of scarless human stem cell genome editing
    • Yang, L. et al. Optimization of scarless human stem cell genome editing. Nucleic Acids Res. 41, 9049-9061 (2013).
    • (2013) Nucleic Acids Res. , vol.41 , pp. 9049-9061
    • Yang, L.1
  • 11
    • 84907257107 scopus 로고    scopus 로고
    • Saturation editing of genomic regions bymultiplex homology-directed repair
    • Findlay, G.M., Boyle, E. A., Hause, R. J., Klein, J. C. & Shendure, J. Saturation editing of genomic regions bymultiplex homology-directed repair. Nature 513, 120-123 (2014).
    • (2014) Nature , vol.513 , pp. 120-123
    • Findlay, G.M.1    Boyle, E.A.2    Hause, R.J.3    Klein, J.C.4    Shendure, J.5
  • 12
    • 84908508061 scopus 로고    scopus 로고
    • Structural basis of PAMdependent target DNA recognition by the Cas9 endonuclease
    • Anders, C., Niewoehner, O., Duerst, A. & Jinek, M. Structural basis of PAMdependent target DNA recognition by the Cas9 endonuclease. Nature 513, 569-573 (2014).
    • (2014) Nature , vol.513 , pp. 569-573
    • Anders, C.1    Niewoehner, O.2    Duerst, A.3    Jinek, M.4
  • 13
    • 84860747716 scopus 로고    scopus 로고
    • FLASH assembly of TALENs for high-throughput genome editing
    • Reyon, D. et al. FLASH assembly of TALENs for high-throughput genome editing. Nature Biotechnol. 30, 460-465 (2012).
    • (2012) Nature Biotechnol. , vol.30 , pp. 460-465
    • Reyon, D.1
  • 14
    • 84880570576 scopus 로고    scopus 로고
    • High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells
    • Fu, Y. et al. High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells. Nature Biotechnol. 31, 822-826 (2013).
    • (2013) Nature Biotechnol. , vol.31 , pp. 822-826
    • Fu, Y.1
  • 15
    • 28544437131 scopus 로고    scopus 로고
    • A highly sensitive selection method for directed evolution of homing endonucleases
    • Chen, Z. & Zhao, H. A highly sensitive selection method for directed evolution of homing endonucleases. Nucleic Acids Res. 33, e154 (2005).
    • (2005) Nucleic Acids Res. , vol.33 , pp. e154
    • Chen, Z.1    Zhao, H.2
  • 16
    • 33644507991 scopus 로고    scopus 로고
    • Directed evolution and substrate specificity profile of homing endonuclease I-SceI
    • Doyon, J. B., Pattanayak, V., Meyer, C. B. & Liu, D. R. Directed evolution and substrate specificity profile of homing endonuclease I-SceI. J. Am. Chem. Soc. 128, 2477-2484 (2006).
    • (2006) J. Am. Chem. Soc. , vol.128 , pp. 2477-2484
    • Doyon, J.B.1    Pattanayak, V.2    Meyer, C.B.3    Liu, D.R.4
  • 17
    • 84887104139 scopus 로고    scopus 로고
    • Orthogonal Cas9 proteins for RNA-guided gene regulation and editing
    • Esvelt, K. M. et al. Orthogonal Cas9 proteins for RNA-guided gene regulation and editing. Nature Methods 10, 1116-1121 (2013).
    • (2013) Nature Methods , vol.10 , pp. 1116-1121
    • Esvelt, K.M.1
  • 18
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • Lander, E. S. et al. Initial sequencing and analysis of the human genome. Nature 409, 860-921 (2001).
    • (2001) Nature , vol.409 , pp. 860-921
    • Lander, E.S.1
  • 19
    • 84884165315 scopus 로고    scopus 로고
    • DNA targeting specificity of RNA-guided Cas9 nucleases
    • Hsu, P. D. et al. DNA targeting specificity of RNA-guided Cas9 nucleases. Nature Biotechnol. 31, 827-832 (2013).
    • (2013) Nature Biotechnol. , vol.31 , pp. 827-832
    • Hsu, P.D.1
  • 20
    • 84884160273 scopus 로고    scopus 로고
    • CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering
    • Mali, P. et al. CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering. Nature Biotechnol. 31, 833-838 (2013).
    • (2013) Nature Biotechnol. , vol.31 , pp. 833-838
    • Mali, P.1
  • 21
    • 84903200702 scopus 로고    scopus 로고
    • Comparison of non-canonical PAMs for CRISPR/Cas9-mediated DNA cleavage in human cells
    • Zhang, Y. et al. Comparison of non-canonical PAMs for CRISPR/Cas9-mediated DNA cleavage in human cells. Sci. Rep. 4, 5405 (2014).
    • (2014) Sci. Rep. , vol.4 , pp. 5405
    • Zhang, Y.1
  • 22
    • 84895832944 scopus 로고    scopus 로고
    • Phylogeny of Cas9 determines functional exchangeability of dual-RNA and Cas9among orthologous type II CRISPR-Cas systems
    • Fonfara, I. et al. Phylogeny of Cas9 determines functional exchangeability of dual-RNA and Cas9among orthologous type II CRISPR-Cas systems. Nucleic Acids Res. 42, 2577-2590 (2014).
    • (2014) Nucleic Acids Res. , vol.42 , pp. 2577-2590
    • Fonfara, I.1
  • 23
    • 84927514894 scopus 로고    scopus 로고
    • In vivo genome editing using Staphylococcus aureus Cas9
    • Ran, F. A. et al. In vivo genome editing using Staphylococcus aureus Cas9. Nature, (2015).
    • (2015) Nature
    • Ran, F.A.1
  • 24
    • 38949123143 scopus 로고    scopus 로고
    • Phage response to CRISPR-encoded resistance in Streptococcus thermophilus
    • Deveau, H. et al. Phage response to CRISPR-encoded resistance in Streptococcus thermophilus. J. Bacteriol. 190, 1390-1400 (2008).
    • (2008) J. Bacteriol. , vol.190 , pp. 1390-1400
    • Deveau, H.1
  • 25
    • 38949214103 scopus 로고    scopus 로고
    • Diversity, activity, and evolution of CRISPR loci in Streptococcus thermophilus
    • Horvath, P. et al. Diversity, activity, and evolution of CRISPR loci in Streptococcus thermophilus. J. Bacteriol. 190, 1401-1412 (2008).
    • (2008) J. Bacteriol. , vol.190 , pp. 1401-1412
    • Horvath, P.1
  • 26
    • 84873729095 scopus 로고    scopus 로고
    • Multiplex genome engineering using CRISPR/Cas systems
    • Cong, L. et al. Multiplex genome engineering using CRISPR/Cas systems. Science 339, 819-823 (2013).
    • (2013) Science , vol.339 , pp. 819-823
    • Cong, L.1
  • 27
    • 84896929630 scopus 로고    scopus 로고
    • Improving CRISPR-Cas nuclease specificity using truncated guide RNAs
    • Fu, Y., Sander, J. D., Reyon, D., Cascio, V. M. & Joung, J. K. Improving CRISPR-Cas nuclease specificity using truncated guide RNAs. Nature Biotechnol. 32, 279-284 (2014).
    • (2014) Nature Biotechnol. , vol.32 , pp. 279-284
    • Fu, Y.1    Sander, J.D.2    Reyon, D.3    Cascio, V.M.4    Joung, J.K.5
  • 28
    • 84884288934 scopus 로고    scopus 로고
    • Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity
    • Ran, F. A. et al. Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. Cell 154, 1380-1389 (2013).
    • (2013) Cell , vol.154 , pp. 1380-1389
    • Ran, F.A.1
  • 29
    • 84902210542 scopus 로고    scopus 로고
    • Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genomemodification
    • Guilinger, J. P., Thompson, D. B. & Liu, D. R. Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genomemodification. Nature Biotechnol. 32, 577-582 (2014).
    • (2014) Nature Biotechnol. , vol.32 , pp. 577-582
    • Guilinger, J.P.1    Thompson, D.B.2    Liu, D.R.3
  • 30
    • 84902204289 scopus 로고    scopus 로고
    • Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing
    • Tsai, S. Q. et al. Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing. Nature Biotechnol. 32, 569-576 (2014).
    • (2014) Nature Biotechnol. , vol.32 , pp. 569-576
    • Tsai, S.Q.1
  • 31
    • 84873734105 scopus 로고    scopus 로고
    • RNA-guided human genome engineering via Cas9
    • Mali, P. et al. RNA-guided human genome engineering via Cas9. Science 339, 823-826 (2013).
    • (2013) Science , vol.339 , pp. 823-826
    • Mali, P.1
  • 32
    • 84874617789 scopus 로고    scopus 로고
    • Efficient genome editing in zebrafish using a CRISPR-Cas system
    • Hwang, W. Y. et al. Efficient genome editing in zebrafish using a CRISPR-Cas system. Nature Biotechnol. 31, 227-229 (2013).
    • (2013) Nature Biotechnol. , vol.31 , pp. 227-229
    • Hwang, W.Y.1
  • 33
    • 84878211288 scopus 로고    scopus 로고
    • The tracr RNA and Cas9families of type II CRISPR-Cas immunity systems
    • Chylinski, K., Le Rhun, A. & Charpentier, E. The tracr RNA and Cas9families of type II CRISPR-Cas immunity systems. RNA Biol. 10, 726-737 (2013).
    • (2013) RNA Biol. , vol.10 , pp. 726-737
    • Chylinski, K.1    Le Rhun, A.2    Charpentier, E.3
  • 34
    • 77952316381 scopus 로고    scopus 로고
    • A unified genetic, computational and experimental framework identifies functionally relevant residues of the homing endonuclease I-BmoI
    • Kleinstiver, B. P., Fernandes, A. D., Gloor, G. B. & Edgell, D. R. A unified genetic, computational and experimental framework identifies functionally relevant residues of the homing endonuclease I-BmoI. Nucleic Acids Res. 38, 2411-2427 (2010).
    • (2010) Nucleic Acids Res. , vol.38 , pp. 2411-2427
    • Kleinstiver, B.P.1    Fernandes, A.D.2    Gloor, G.B.3    Edgell, D.R.4
  • 35
    • 84902141229 scopus 로고    scopus 로고
    • Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs
    • Gagnon, J. A. et al. Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs. PLoS ONE 9, e98186 (2014).
    • (2014) PLoS ONE , vol.9 , pp. e98186
    • Gagnon, J.A.1
  • 36
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li, H. & Durbin, R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25, 1754-1760 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.