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Volumn 32, Issue 6, 2014, Pages 577-582

Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genome modification

Author keywords

[No Author keywords available]

Indexed keywords

DNA; MONOMERS;

EID: 84902210542     PISSN: 10870156     EISSN: 15461696     Source Type: Journal    
DOI: 10.1038/nbt.2909     Document Type: Article
Times cited : (732)

References (32)
  • 1
    • 84892765883 scopus 로고    scopus 로고
    • Genome-scale CRISPR-Cas9 knockout screening in human cells
    • Shalem, O. et al. Genome-scale CRISPR-Cas9 knockout screening in human cells. Science 343, 84-87 (2014).
    • (2014) Science , vol.343 , pp. 84-87
    • Shalem, O.1
  • 2
    • 46949095221 scopus 로고    scopus 로고
    • Establishment of HIV-1 resistance in CD4+ T cells by genome editing using zinc-finger nucleases
    • Perez, E.E. et al. Establishment of HIV-1 resistance in CD4+ T cells by genome editing using zinc-finger nucleases. Nat. Biotechnol. 26, 808-816 (2008).
    • (2008) Nat. Biotechnol , vol.26 , pp. 808-816
    • Perez, E.E.1
  • 3
    • 84873734105 scopus 로고    scopus 로고
    • RNA-guided human genome engineering via Cas9
    • Mali, P. et al. RNA-guided human genome engineering via Cas9. Science 339, 823-826 (2013).
    • (2013) Science , vol.339 , pp. 823-826
    • Mali, P.1
  • 4
    • 84896929630 scopus 로고    scopus 로고
    • Improving CRIS PR-Cas nuclease specificity using truncated guide RNAs
    • Fu, Y., Sander, J.D., Reyon, D., Cascio, V.M. & Joung, J.K. Improving CRIS PR-Cas nuclease specificity using truncated guide RNAs. Nat. Biotechnol. 32, 279-284 (2014).
    • (2014) Nat. Biotechnol , vol.32 , pp. 279-284
    • Fu, Y.1    Sander, J.D.2    Reyon, D.3    Cascio, V.M.4    Joung, J.K.5
  • 5
    • 84865070369 scopus 로고    scopus 로고
    • A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
    • Jinek, M. et al. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 337, 816-821 (2012).
    • (2012) Science , vol.337 , pp. 816-821
    • Jinek, M.1
  • 6
    • 84873729095 scopus 로고    scopus 로고
    • Multiplex genome engineering using CRISPR/Cas systems
    • Cong, L. et al. Multiplex genome engineering using CRISPR/Cas systems. Science 339, 819-823 (2013).
    • (2013) Science , vol.339 , pp. 819-823
    • Cong, L.1
  • 7
    • 84876567971 scopus 로고    scopus 로고
    • RNA-programmed genome editing in human cells
    • Jinek, M. et al. RNA-programmed genome editing in human cells. eLife 2, e00471 (2013).
    • (2013) ELife , vol.2
    • Jinek, M.1
  • 8
    • 84884155038 scopus 로고    scopus 로고
    • High-throughput profiling of off-target DNA cleavage reveals RNAprogrammed Cas9 nuclease specificity
    • Pattanayak, V. et al. High-throughput profiling of off-target DNA cleavage reveals RNAprogrammed Cas9 nuclease specificity. Nat. Biotechnol. 31, 839-843 (2013).
    • (2013) Nat. Biotechnol , vol.31 , pp. 839-843
    • Pattanayak, V.1
  • 9
    • 84880570576 scopus 로고    scopus 로고
    • High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells
    • Fu, Y. et al. High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells. Nat. Biotechnol. 31, 822-826 (2013).
    • (2013) Nat. Biotechnol , vol.31 , pp. 822-826
    • Fu, Y.1
  • 10
    • 84884165315 scopus 로고    scopus 로고
    • DNA targeting specificity of RNA-guided Cas9 nucleases
    • Hsu, P.D. et al. DNA targeting specificity of RNA-guided Cas9 nucleases. Nat. Biotechnol. 31, 827-832 (2013).
    • (2013) Nat. Biotechnol , vol.31 , pp. 827-832
    • Hsu, P.D.1
  • 11
    • 84884950106 scopus 로고    scopus 로고
    • CRISPR/Cas9 systems targeting β-globin and CCR 5 genes have substantial off-target activity
    • Cradick, T.J., Fine, E.J., Antico, C.J. & Bao, G. CRISPR/Cas9 systems targeting β-globin and CCR 5 genes have substantial off-target activity. Nucleic Acids Res. 41, 9584-9592 (2013).
    • (2013) Nucleic Acids Res , vol.41 , pp. 9584-9592
    • Cradick, T.J.1    Fine, E.J.2    Antico, C.J.3    Bao, G.4
  • 12
    • 84891710947 scopus 로고    scopus 로고
    • Analysis of off-target effects of CRIS PR/Cas-derived RNA-guided endonucleases and nickases
    • Cho, S.W. et al. Analysis of off-target effects of CRIS PR/Cas-derived RNA-guided endonucleases and nickases. Genome Res. 24, 132-141 (2014).
    • (2014) Genome Res , vol.24 , pp. 132-141
    • Cho, S.W.1
  • 13
    • 84884160273 scopus 로고    scopus 로고
    • CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering
    • Mali, P. et al. CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering. Nat. Biotechnol. 31, 833-838 (2013).
    • (2013) Nat. Biotechnol , vol.31 , pp. 833-838
    • Mali, P.1
  • 14
    • 84884288934 scopus 로고    scopus 로고
    • Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity
    • Ran, F.A. et al. Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. Cell 154, 1380-1389 (2013).
    • (2013) Cell , vol.154 , pp. 1380-1389
    • Ran, F.A.1
  • 15
    • 84866859751 scopus 로고    scopus 로고
    • Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria
    • Gasiunas, G., Barrangou, R., Horvath, P. & Siksnys, V. Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria. Proc. Natl. Acad. Sci. USA 109, E2579-E2586 (2012).
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109
    • Gasiunas, G.1    Barrangou, R.2    Horvath, P.3    Siksnys, V.4
  • 16
    • 84861960685 scopus 로고    scopus 로고
    • Engineered zinc finger nickases induce homology-directed repair with reduced mutagenic effects
    • Ramirez, C.L. et al. Engineered zinc finger nickases induce homology-directed repair with reduced mutagenic effects. Nucleic Acids Res. 40, 5560-5568 (2012).
    • (2012) Nucleic Acids Res , vol.40 , pp. 5560-5568
    • Ramirez, C.L.1
  • 17
    • 84861984839 scopus 로고    scopus 로고
    • Targeted gene addition to a predetermined site in the human genome using a ZFN-based nicking enzyme
    • Wang, J. et al. Targeted gene addition to a predetermined site in the human genome using a ZFN-based nicking enzyme. Genome Res. 22, 1316-1326 (2012).
    • (2012) Genome Res , vol.22 , pp. 1316-1326
    • Wang, J.1
  • 18
    • 0035946911 scopus 로고    scopus 로고
    • FokI requires two specific DNA sites for cleavage
    • Vanamee, É.S., Santagata, S. & Aggarwal, A.K. FokI requires two specific DNA sites for cleavage. J. Mol. Biol. 309, 69-78 (2001).
    • (2001) J. Mol. Biol , vol.309 , pp. 69-78
    • Vanamee, É.S.1    Santagata, S.2    Aggarwal, A.K.3
  • 19
    • 80052293623 scopus 로고    scopus 로고
    • Revealing off-target cleavage specificities of zinc-finger nucleases by in vitro selection
    • Pattanayak, V., Ramirez, C.L., Joung, J.K. & Liu, D.R. Revealing off-target cleavage specificities of zinc-finger nucleases by in vitro selection. Nat. Methods 8, 765-770 (2011).
    • (2011) Nat. Methods , vol.8 , pp. 765-770
    • Pattanayak, V.1    Ramirez, C.L.2    Joung, J.K.3    Liu, D.R.4
  • 20
    • 84897954502 scopus 로고    scopus 로고
    • Broad specificity profiling of TALE Ns results in engineered nucleases with improved DNA-cleavage specificity
    • Guilinger, J.P. et al. Broad specificity profiling of TALE Ns results in engineered nucleases with improved DNA-cleavage specificity. Nat. Methods 11, 429-435 (2014).
    • (2014) Nat. Methods , vol.11 , pp. 429-435
    • Guilinger, J.P.1
  • 21
    • 84896733529 scopus 로고    scopus 로고
    • Crystal structure of Cas9 in complex with guide RNA and target DNA
    • Nishimasu, H. et al. Crystal structure of Cas9 in complex with guide RNA and target DNA. Cell 156, 935-949 (2014).
    • (2014) Cell , vol.156 , pp. 935-949
    • Nishimasu, H.1
  • 22
    • 84900870803 scopus 로고    scopus 로고
    • Structures of Cas9 endonucleases reveal RNA-mediated conformational activation
    • Jinek, M. et al. Structures of Cas9 endonucleases reveal RNA-mediated conformational activation. Science 31, 6176 (2014).
    • (2014) Science , vol.31 , pp. 6176
    • Jinek, M.1
  • 23
    • 71849085755 scopus 로고    scopus 로고
    • A recombinant polypeptide extends the in vivo half-life of peptides and proteins in a tunable manner
    • Schellenberger, V. et al. A recombinant polypeptide extends the in vivo half-life of peptides and proteins in a tunable manner. Nat. Biotechnol. 27, 1186-1190 (2009).
    • (2009) Nat. Biotechnol , vol.27 , pp. 1186-1190
    • Schellenberger, V.1
  • 24
    • 84874687019 scopus 로고    scopus 로고
    • Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression
    • Qi, L.S. et al. Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression. Cell 152, 1173-1183 (2013).
    • (2013) Cell , vol.152 , pp. 1173-1183
    • Qi, L.S.1
  • 25
    • 84887104139 scopus 로고    scopus 로고
    • Orthogonal Cas9 proteins for RNA-guided gene regulation and editing
    • Esvelt, K.M. et al. Orthogonal Cas9 proteins for RNA-guided gene regulation and editing. Nat. Methods 10, 1116-1121 (2013).
    • (2013) Nat. Methods , vol.10 , pp. 1116-1121
    • Esvelt, K.M.1
  • 26
    • 84874663256 scopus 로고    scopus 로고
    • TALE Ns and ZFNs are associated with different mutation signatures
    • Kim, Y., Kweon, J. & Kim, J.-S. TALE Ns and ZFNs are associated with different mutation signatures. Nat. Methods 10, 185-185 (2013).
    • (2013) Nat. Methods , vol.10 , pp. 185-185
    • Kim, Y.1    Kweon, J.2    Kim, J.-S.3
  • 27
    • 84902095352 scopus 로고    scopus 로고
    • Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells
    • doi:10.1038/nbt.2889 (20 April 2014)
    • Wu, X. et al. Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells. Nat. Biotechnol. doi:10.1038/nbt.2889 (20 April 2014).
    • Nat. Biotechnol
    • Wu, X.1
  • 28
    • 78650912707 scopus 로고    scopus 로고
    • Enhancing zinc-finger-nuclease activity with improved obligate heterodimeric architectures
    • Doyon, Y. et al. Enhancing zinc-finger-nuclease activity with improved obligate heterodimeric architectures. Nat. Methods 8, 74-79 (2011).
    • (2011) Nat. Methods , vol.8 , pp. 74-79
    • Doyon, Y.1
  • 29
    • 84881481582 scopus 로고    scopus 로고
    • Near-infrared fluorescent proteins for multicolor in vivo imaging
    • Shcherbakova, D.M. & Verkhusha, V.V. Near-infrared fluorescent proteins for multicolor in vivo imaging. Nat. Methods 10, 751-754 (2013).
    • (2013) Nat. Methods , vol.10 , pp. 751-754
    • Shcherbakova, D.M.1    Verkhusha, V.V.2
  • 30
    • 84863205849 scopus 로고    scopus 로고
    • NIH Image to ImageJ: 25 years of image analysis
    • Schneider, C.A., Rasband, W.S. & Eliceiri, K.W. NIH Image to ImageJ: 25 years of image analysis. Nat. Methods 9, 671-675 (2012).
    • (2012) Nat. Methods , vol.9 , pp. 671-675
    • Schneider, C.A.1    Rasband, W.S.2    Eliceiri, K.W.3
  • 31
    • 84878711741 scopus 로고    scopus 로고
    • (eds. Mackay, J.P. & Segal, D.J.), Humana Press
    • Guschin, D.Y. et al. in Engineering Zinc Finger Proteins (eds. Mackay, J.P. & Segal, D.J.) 247-256 (Humana Press, 2010).
    • (2010) Engineering Zinc Finger Proteins , pp. 247-256
    • Guschin, D.Y.1
  • 32
    • 84885979507 scopus 로고    scopus 로고
    • In silico abstraction of zinc finger nuclease cleavage profiles reveals an expanded landscape of off-target sites
    • Sander, J.D. et al. In silico abstraction of zinc finger nuclease cleavage profiles reveals an expanded landscape of off-target sites. Nucleic Acids Res. 41, e181 (2013).
    • (2013) Nucleic Acids Res , vol.41
    • Sander, J.D.1


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