Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

Genome Biology

Volumn 18, Issue 1, 2017, Pages

  de Vries, Ronald P ^a,b   Riley, Robert ^c   Wiebenga, Ad ^a,b   Aguilar Osorio, Guillermo ^d   Amillis, Sotiris ^e   Uchima, Cristiane Akemi ^f,bc   Anderluh, Gregor ^g   Asadollahi, Mojtaba ^h   Askin, Marion ^i,bd   Barry, Kerrie ^c   Battaglia, Evy ^a,b   Bayram, Özgür ^j,k   Benocci, Tiziano ^a,b   Braus Stromeyer, Susanna A ^j   Caldana, Camila ^f   Cánovas, David ^l,m   Cerqueira, Gustavo C ⁿ   Chen, Fusheng ^o   Chen, Wanping ^o   Choi, Cindy ^c   Clum, Alicia ^c   dos Santos, Renato Augusto Corrêa ^f   de Lima Damásio, André Ricardo ^f,p   Diallinas, George ^e   Emri, Tamás ^h   Fekete, Erzsébet ^h   Flipphi, Michel ^h   Freyberg, Susanne ^j   Gallo, Antonia ^q   Gournas, Christos ^r,be   Habgood, Rob ^s   Hainaut, Matthieu ^t   Harispe, María Laura ^u,bf   Henrissat, Bernard ^t,v,w   Hildén, Kristiina S ^x   Hope, Ryan ^s   Hossain, Abeer ^y,z   Karabika, Eugenia ^aa,bg   Karaffa, Levente ^h   Karányi, Zsolt ^ab   Kraševec, Nada ^g   Kuo, Alan ^c   Kusch, Harald ^j,ac   LaButti, Kurt ^c   Lagendijk, Ellen L ⁱ   Lapidus, Alla ^c,bh   Levasseur, Anthony ^t   Lindquist, Erika ^c   Lipzen, Anna ^c   Logrieco, Antonio F ^ad   MacCabe, Andrew ^ae   Mäkelä, Miia R ^x   Malavazi, Iran ^af   Melin, Petter ^ag,bi   Meyer, Vera ^ah   Mielnichuk, Natalia ^l,bj   Miskei, Márton ^h,ai   Molnár, Ákos P ^h   Mulé, Giuseppina ^ad   Ngan, Chew Yee ^c   Orejas, Margarita ^ae   Orosz, Erzsébet ^a,h   Ouedraogo, Jean Paul ^i,as   Overkamp, Karin M ^y   Park, Hee Soo ^aj   Perrone, Giancarlo ^ad   Piumi, Francois ^t,bk   Punt, Peter J ^i,y   Ram, Arthur F J ⁱ   Ramón, Ana ^ak   Rauscher, Stefan ^al   Record, Eric ^t   Riaño Pachón, Diego Mauricio ^f   Robert, Vincent ^a   Röhrig, Julian ^al   Ruller, Roberto ^f   Salamov, Asaf ^c   Salih, Nadhira S ^s,am   Samson, Rob A ^a   Sándor, Erzsébet ^an   Sanguinetti, Manuel ^ak   Schütze, Tabea ^i,ah   Sepčić, Kristina ^ao   Shelest, Ekaterina ^ap   Sherlock, Gavin ^aq   Sophianopoulou, Vicky ^r   Squina, Fabio M ^f   Sun, Hui ^c   Susca, Antonia ^ad   Todd, Richard B ^ar   Tsang, Adrian ^as   Unkles, Shiela E ^aa   van de Wiele, Nathalie ^a   van Rossen Uffink, Diana ^i,bl   de Castro Oliveira, Juliana Velasco ^f   Vesth, Tammi C ^at   Visser, Jaap ^a   Yu, Jae Hyuk ^au   Zhou, Miaomiao ^a,b   Andersen, Mikael R ^at   Archer, David B ^s   Baker, Scott E ^av   Benoit, Isabelle ^a,b,as   Brakhage, Axel A ^aw   Braus, Gerhard H ^j   Fischer, Reinhard ^al   Frisvad, Jens C ^at   Goldman, Gustavo H ^ax   Houbraken, Jos ^a   Oakley, Berl ^ay   Pócsi, István ^h   Scazzocchio, Claudio ^az,ba   Seiboth, Bernhard ^bb   vanKuyk, Patricia A ^a,i   Wortman, Jennifer ^n,bm   Dyer, Paul S ^s   Grigoriev, Igor V ^c   more..

^a CBS KNAW FUNGAL BIODIVERSITY CENTRE   (Netherlands)

^b UTRECHT UNIVERSITY   (Netherlands)

^c DOE JOINT GENOME INSTITUTE   (United States)

^d UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO   (Mexico)

^e UNIVERSITY OF ATHENS   (Greece)

^f BRAZILIAN CENTER FOR RESEARCH IN ENERGY AND MATERIALS CNPEM   (Brazil)

^g NATIONAL INSTITUTE OF CHEMISTRY   (Slovenia)

^h UNIVERSITY OF DEBRECEN   (Hungary)

ⁱ LEIDEN UNIVERSITY   (Netherlands)

^j UNIVERSITY OF GÖTTINGEN   (Germany)

^k NATIONAL UNIVERSITY OF IRELAND   (Ireland)

^l UNIVERSITY OF SEVILLE   (Spain)

^m UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES   (Austria)

ⁿ BROAD INSTITUTE OF MIT AND HARVARD   (United States)

^o HUAZHONG AGRICULTURAL UNIVERSITY   (China)

^p UNIVERSITY OF CAMPINAS   (Brazil)

^q CNR   (Italy)

^r INSTITUTE OF NANOSCIENCE AND NANOTECHNOLOGY   (Greece)

^s UNIVERSITY OF NOTTINGHAM   (United Kingdom)

^t AIX MARSEILLE UNIVERSITY   (France)

^u INSTITUT PASTEUR DE MONTEVIDEO   (Uruguay)

^v Centre National de la Recherche Scientifique   (France)

^w KING ABDULAZIZ UNIVERSITY   (Saudi Arabia)

^x UNIVERSITY OF HELSINKI   (Finland)

^y Dutch DNA Biotech BV   (Netherlands)

^z UNIVERSITY OF AMSTERDAM   (Netherlands)

^aa UNIVERSITY OF ST ANDREWS   (United Kingdom)

^ab UNIVERSITY OF DEBRECEN   (Hungary)

^ac UNIVERSITY MEDICAL CENTER GÖTTINGEN   (Germany)

^ad INSTITUTE OF SCIENCES OF FOOD PRODUCTION   (Italy)

^ae INSTITUTO DE AGROQUÍMICA Y TECNOLOGÍA DE ALIMENTOS CSIC   (Spain)

^af FEDERAL UNIVERSITY OF SÃO CARLOS   (Brazil)

^ag SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^ah TECHNISCHE UNIVERSITÄT BERLIN   (Germany)

^ai UNIVERSITY OF DEBRECEN   (Hungary)

^aj Kyungpook National University   (South Korea)

^ak UNIVERSIDAD DE LA REPÚBLICA   (Uruguay)

^al KARLSRUHE INSTITUTE OF TECHNOLOGY   (Germany)

^am UNIVERSITY OF SULAIMANI   (Iraq)

^an UNIVERSITY OF DEBRECEN   (Hungary)

^ao UNIVERSITY OF LJUBLJANA   (Slovenia)

^ap HANS KNÖLL INSTITUTE   (Germany)

^aq STANFORD UNIVERSITY   (United States)

^ar KANSAS STATE UNIVERSITY   (United States)

^as Gina Cody School of Engineering and Computer Science   (Canada)

^at TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^au UNIVERSITY OF WISCONSIN MADISON   (United States)

^av PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

^aw FRIEDRICH SCHILLER UNIVERSITY JENA   (Germany)

^ax UNIVERSITY OF SÃO PAULO   (Brazil)

^ay UNIVERSITY OF KANSAS   (United States)

^az IMPERIAL COLLEGE LONDON   (United Kingdom)

^ba INSTITUTE FOR INTEGRATIVE BIOLOGY OF THE CELL I2BC   (France)

^bb VIENNA UNIVERSITY OF TECHNOLOGY   (Austria)

^bc VTT TECHNICAL RESEARCH CENTRE OF FINLAND   (Finland)

^bd CSIRO   (Australia)

^be UNIVERSITÉ LIBRE DE BRUXELLES   (Belgium)

^bf Investigadora Del Departamento de Matematica Del Consejo de Formacion en Educacion ANEP   (Uruguay)

^bg UNIVERSITY OF IOANNINA   (Greece)

^bh ST PETERSBURG STATE UNIVERSITY   (Russian Federation)

^bi Swedish Chemicals Agency   (Sweden)

^bj Fundacion Pablo Cassara   (Argentina)

^bk INRA Institut National de la Recherche Agronomique   (France)

^bl BaseClear BV   (Netherlands)

^bm Seres Therapeutics   (United States)

more..

Author keywords

Aspergillus; Comparative genomics; Fungal biology; Genome sequencing

Indexed keywords

ARTICLE; ASEXUAL REPRODUCTION; ASPERGILLUS; CONTROLLED STUDY; FUNGAL GENE; FUNGAL GENOME; FUNGAL REPRODUCTION; FUNGUS IDENTIFICATION; GENE FUNCTION; GENE IDENTIFICATION; GENOME ANALYSIS; GENOME-WIDE ASSOCIATION STUDY; MOLECULAR PHYLOGENY; NONHUMAN; SECONDARY METABOLISM; SEQUENCE ANALYSIS; SPECIES DIVERSITY; ADAPTATION; BIODIVERSITY; BIOLOGY; BIOMASS; CLASSIFICATION; DNA METHYLATION; GENE EXPRESSION REGULATION; GENE REGULATORY NETWORK; GENETICS; GENOMICS; HUMAN; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; MULTIGENE FAMILY; PHYLOGENY; PHYSIOLOGICAL STRESS; PLANT; PROCEDURES; SIGNAL TRANSDUCTION;

CARBON; CYTOCHROME P450; FUNGAL PROTEIN; OXIDOREDUCTASE;

ADAPTATION, BIOLOGICAL; ASPERGILLUS; BIODIVERSITY; BIOMASS; CARBON; COMPUTATIONAL BIOLOGY; CYTOCHROME P-450 ENZYME SYSTEM; DNA METHYLATION; FUNGAL PROTEINS; GENE EXPRESSION REGULATION, FUNGAL; GENE REGULATORY NETWORKS; GENOME, FUNGAL; GENOMICS; HUMANS; METABOLIC NETWORKS AND PATHWAYS; MOLECULAR SEQUENCE ANNOTATION; MULTIGENE FAMILY; OXIDOREDUCTASES; PHYLOGENY; PLANTS; SECONDARY METABOLISM; SIGNAL TRANSDUCTION; STRESS, PHYSIOLOGICAL;

EID: 85013301401     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/s13059-017-1151-0     Document Type: Article

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