-
2
-
-
77951700065
-
-
US Food Drug Admin Silver Spring MD: US Food Drug Admin
-
US Food Drug Admin. 2012. Drugs@FDA: FDA Approved Drug Products. Silver Spring, MD: US Food Drug Admin. http://www.accessdata.fda.gov/scripts/cder/ drugsatfda/index.cfm
-
(2012)
Drugs@FDA: FDA Approved Drug Products
-
-
-
3
-
-
77950267684
-
-
US Food Drug Admin Silver Spring, MD: US Food Drug Admin
-
US Food Drug Admin. 2012. Adverse Event Reporting System (AERS ). Silver Spring, MD: US Food Drug Admin. http://www.fda.gov/Drugs/ GuidanceComplianceRegulatoryInformation/Surveillance/AdverseDrugEffects/default. htm
-
(2012)
Adverse Event Reporting System (AERS )
-
-
-
4
-
-
4344645978
-
Can the pharmaceutical industry reduce attrition rates?
-
Kola I, Landis J. 2004. Can the pharmaceutical industry reduce attrition rates? Nat. Rev. Drug Discov. 3:711-15
-
(2004)
Nat. Rev. Drug Discov
, vol.3
, pp. 711-715
-
-
Kola, I.1
Landis, J.2
-
5
-
-
0036792660
-
Mitochondrial permeability transition as a novel principle of hepatorenal toxicity in vivo
-
Haouzi D, Cohen I, Vieira HL, Poncet D, Boya P, et al. 2002. Mitochondrial permeability transition as a novel principle of hepatorenal toxicity in vivo. Apoptosis 7:395-405
-
(2002)
Apoptosis
, vol.7
, pp. 395-405
-
-
Haouzi, D.1
Cohen, I.2
Vieira, H.L.3
Poncet, D.4
Boya, P.5
-
6
-
-
13244292321
-
Mechanisms of acetaminopheninduced hepatotoxicity: Role of oxidative stress and mitochondrial permeability transition in freshly isolated mouse hepatocytes
-
Reid AB, Kurten RC, McCullough SS, Brock RW, Hinson JA. 2005. Mechanisms of acetaminopheninduced hepatotoxicity: role of oxidative stress and mitochondrial permeability transition in freshly isolated mouse hepatocytes. J. Pharmacol. Exp. Ther. 312:509-16
-
(2005)
J. Pharmacol. Exp. Ther
, vol.312
, pp. 509-516
-
-
Reid, A.B.1
Kurten, R.C.2
McCullough, S.S.3
Brock, R.W.4
Hinson, J.A.5
-
7
-
-
0034802130
-
Acetaminophen induces apoptosis of C6 glioma cells by activating the c-Jun NH2-terminal protein kinase-related cell death pathway
-
Bae MA, Pie JE, Song BJ. 2001. Acetaminophen induces apoptosis of C6 glioma cells by activating the c-Jun NH2-terminal protein kinase-related cell death pathway. Mol. Pharmacol. 60:847-56
-
(2001)
Mol. Pharmacol
, vol.60
, pp. 847-856
-
-
Bae, M.A.1
Pie, J.E.2
Song, B.J.3
-
8
-
-
42149110793
-
Apoptosis versus necrosis rate as a predictor in acute liver failure following acetaminophen intoxication compared with acute-onchronic liver failure
-
Bechmann LP, Marquitan G, Jochum C, Saner F, Gerken G, Canbay A. 2008. Apoptosis versus necrosis rate as a predictor in acute liver failure following acetaminophen intoxication compared with acute-onchronic liver failure. Liver Int. 28:713-16
-
(2008)
Liver Int
, vol.28
, pp. 713-716
-
-
Bechmann, L.P.1
Marquitan, G.2
Jochum, C.3
Saner, F.4
Gerken, G.5
Canbay, A.6
-
9
-
-
61949166066
-
How similar are similarity searching methods? A principal component analysis of molecular descriptor space
-
Bender A, Jenkins JL, Scheiber J, Sukuru SC, Glick M, Davies JW. 2009. How similar are similarity searching methods? A principal component analysis of molecular descriptor space. J. Chem. Inf. Model. 49:108-19
-
(2009)
J. Chem. Inf. Model
, vol.49
, pp. 108-119
-
-
Bender, A.1
Jenkins, J.L.2
Scheiber, J.3
Sukuru, S.C.4
Glick, M.5
Davies, J.W.6
-
10
-
-
33749335282
-
The Connectivity Map: Using geneexpression signatures to connect small molecules, genes, and disease
-
Lamb J, Crawford ED, Peck D, Modell JW, Blat IC, et al. 2006. The Connectivity Map: using geneexpression signatures to connect small molecules, genes, and disease. Science 313:1929-35
-
(2006)
Science
, vol.313
, pp. 1929-1935
-
-
Lamb, J.1
Crawford, E.D.2
Peck, D.3
Modell, J.W.4
Blat, I.C.5
-
11
-
-
47249146126
-
Drug target identification using side-effect similarity
-
Campillos M, Kuhn M, Gavin AC, Jensen LJ, Bork P. 2008. Drug target identification using side-effect similarity. Science 321:263-66
-
(2008)
Science
, vol.321
, pp. 263-266
-
-
Campillos, M.1
Kuhn, M.2
Gavin, A.C.3
Jensen, L.J.4
Bork, P.5
-
12
-
-
77954654798
-
Characterization and classification of adverse drug interactions
-
Takarabe M, Shigemizu D, Kotera M, Goto S, Kanehisa M. 2010. Characterization and classification of adverse drug interactions. Genome Inform. 22:167-75
-
(2010)
Genome Inform
, vol.22
, pp. 167-175
-
-
Takarabe, M.1
Shigemizu, D.2
Kotera, M.3
Goto, S.4
Kanehisa, M.5
-
14
-
-
65249092595
-
Gaining insight into off-target mediated effects of drug candidates with a comprehensive systems chemical biology analysis
-
Scheiber J, Chen B, Milik M, Sukuru SC, Bender A, et al. 2009. Gaining insight into off-target mediated effects of drug candidates with a comprehensive systems chemical biology analysis. J. Chem. Inf. Model. 49:308-17
-
(2009)
J. Chem. Inf. Model
, vol.49
, pp. 308-317
-
-
Scheiber, J.1
Chen, B.2
Milik, M.3
Sukuru, S.C.4
Bender, A.5
-
16
-
-
84855906545
-
Using genome-wide association studies to identify genes important in serious adverse drug reactions
-
Daly AK. 2012. Using genome-wide association studies to identify genes important in serious adverse drug reactions. Annu. Rev. Pharmacol. Toxicol. 52:21-35
-
(2012)
Annu. Rev. Pharmacol. Toxicol
, vol.52
, pp. 21-35
-
-
Daly, A.K.1
-
17
-
-
79955556473
-
Epigenetic changes induced by air toxics: Formaldehyde exposure alters miRNA expression profiles in human lung cells
-
Rager JE, Smeester L, Jaspers I, Sexton KG, Fry RC. 2011. Epigenetic changes induced by air toxics: Formaldehyde exposure alters miRNA expression profiles in human lung cells. Environ. Health Perspect. 119:494-500
-
(2011)
Environ. Health Perspect
, vol.119
, pp. 494-500
-
-
Rager, J.E.1
Smeester, L.2
Jaspers, I.3
Sexton, K.G.4
Fry, R.C.5
-
18
-
-
78650010368
-
Understanding lactic acidosis in paracetamol (acetaminophen) poisoning
-
Shah AD, Wood DM, Dargan PI. 2011. Understanding lactic acidosis in paracetamol (acetaminophen) poisoning. Br. J. Clin. Pharmacol. 71:20-28
-
(2011)
Br. J. Clin. Pharmacol
, vol.71
, pp. 20-28
-
-
Shah, A.D.1
Wood, D.M.2
Dargan, P.I.3
-
19
-
-
73449144437
-
Acetaminophen dosing of humans results in blood transcriptome and metabolome changes consistent with impaired oxidative phosphorylation
-
Fannin RD, Russo M, O'Connell TM, Gerrish K, Winnike JH, et al. 2010. Acetaminophen dosing of humans results in blood transcriptome and metabolome changes consistent with impaired oxidative phosphorylation. Hepatology 51:227-36
-
(2010)
Hepatology
, vol.51
, pp. 227-236
-
-
Fannin, R.D.1
Russo, M.2
O'Connell, T.M.3
Gerrish, K.4
Winnike, J.H.5
-
20
-
-
70249084706
-
-
US Dep. Health Hum. Serv. US Food Drug Admin. Cent. Drug Eval. Res. Cent. Biol. Eval. Res Silver Spring, MD: US Food Drug Admin
-
US Dep. Health Hum. Serv., US Food Drug Admin., Cent. Drug Eval. Res., Cent. Biol. Eval. Res. 2009. Guidance for industry: drug-induced liver injury: premarketing clinical evaluation. Silver Spring, MD: US Food Drug Admin. http://www.fda.gov/downloads/Drugs/GuidanceComplianceRegulatoryInformation/ Guidances/UCM174090.pdf
-
(2009)
Guidance for Industry: Drug-induced Liver Injury: Premarketing Clinical Evaluation
-
-
-
21
-
-
23944436696
-
A rapid new assay to detect RNA editing reveals antipsychotic-induced changes in serotonin-2C transcripts
-
Sodhi MS, Airey DC, Lambert W, Burnet PW, Harrison PJ, Sanders-Bush E. 2005. A rapid new assay to detect RNA editing reveals antipsychotic-induced changes in serotonin-2C transcripts. Mol. Pharmacol. 68:711-19
-
(2005)
Mol. Pharmacol
, vol.68
, pp. 711-719
-
-
Sodhi, M.S.1
Airey, D.C.2
Lambert, W.3
Burnet, P.W.4
Harrison, P.J.5
Sanders-Bush, E.6
-
22
-
-
73449131530
-
Alcohol exposure alters DNA methylation profiles in mouse embryos at early neurulation
-
Liu Y, Balaraman Y, Wang G, Nephew KP, Zhou FC. 2009. Alcohol exposure alters DNA methylation profiles in mouse embryos at early neurulation. Epigenetics 4:500-11
-
(2009)
Epigenetics
, vol.4
, pp. 500-511
-
-
Liu, Y.1
Balaraman, Y.2
Wang, G.3
Nephew, K.P.4
Zhou, F.C.5
-
23
-
-
67049100457
-
Drug discovery using chemical systems biology: Identification of the protein-ligand binding network to explain the side effects of CETP inhibitors
-
Xie L, Li J, Bourne PE. 2009. Drug discovery using chemical systems biology: identification of the protein-ligand binding network to explain the side effects of CETP inhibitors. PLoS Comput. Biol. 5:e1000387
-
(2009)
PLoS Comput. Biol
, vol.5
-
-
Xie, L.1
Li, J.2
Bourne, P.E.3
-
24
-
-
77956554551
-
Networks inferred from biochemical data reveal profound differences in toll-like receptor and inflammatory signaling between normal and transformed hepatocytes
-
Alexopoulos LG, Saez-Rodriguez J, Cosgrove BD, Lauffenburger DA, Sorger PK. 2010. Networks inferred from biochemical data reveal profound differences in toll-like receptor and inflammatory signaling between normal and transformed hepatocytes. Mol. Cell. Proteomics 9:1849-65
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 1849-1865
-
-
Alexopoulos, L.G.1
Saez-Rodriguez, J.2
Cosgrove, B.D.3
Lauffenburger, D.A.4
Sorger, P.K.5
-
25
-
-
79957474305
-
Induction of vesicular steatosis by amiodarone and tetracycline is associated with up-regulation of lipogenic genes in HepaRG cells
-
Antherieu S, Rogue A, Fromenty B, Guillouzo A, Robin MA. 2011. Induction of vesicular steatosis by amiodarone and tetracycline is associated with up-regulation of lipogenic genes in HepaRG cells. Hepatology 53:1895-905
-
(2011)
Hepatology
, vol.53
, pp. 1895-905
-
-
Antherieu, S.1
Rogue, A.2
Fromenty, B.3
Guillouzo, A.4
Robin, M.A.5
-
26
-
-
66049157560
-
Serum metabolomics reveals irreversible inhibition of fatty acid β-oxidation through the suppression of PPARα activation as a contributing mechanism of acetaminophen-induced hepatotoxicity
-
Chen C, Krausz KW, Shah YM, Idle JR, Gonzalez FJ. 2009. Serum metabolomics reveals irreversible inhibition of fatty acid β-oxidation through the suppression of PPARα activation as a contributing mechanism of acetaminophen-induced hepatotoxicity. Chem. Res. Toxicol. 22:699-707
-
(2009)
Chem. Res. Toxicol
, vol.22
, pp. 699-707
-
-
Chen, C.1
Krausz, K.W.2
Shah, Y.M.3
Idle, J.R.4
Gonzalez, F.J.5
-
27
-
-
53549129716
-
Mitochondrial dysfunction and delayed hepatotoxicity: Another lesson from troglitazone
-
Julie NL, Julie IM, Kende AI, Wilson GL. 2008. Mitochondrial dysfunction and delayed hepatotoxicity: another lesson from troglitazone. Diabetologia 51:2108-16
-
(2008)
Diabetologia
, vol.51
, pp. 2108-2116
-
-
Julie, N.L.1
Julie, I.M.2
Kende, A.I.3
Wilson, G.L.4
-
28
-
-
76149120425
-
A side effect resource to capture phenotypic effects of drugs
-
Kuhn M, Campillos M, Letunic I, Jensen LJ, Bork P. 2010. A side effect resource to capture phenotypic effects of drugs. Mol. Syst. Biol. 6:343
-
(2010)
Mol. Syst. Biol
, vol.6
, pp. 343
-
-
Kuhn, M.1
Campillos, M.2
Letunic, I.3
Jensen, L.J.4
Bork, P.5
-
29
-
-
60749099873
-
Defining 'signal' and its subtypes in pharmacovigilance based on a systematic review of previous definitions
-
Hauben M, Aronson JK. 2009. Defining 'signal' and its subtypes in pharmacovigilance based on a systematic review of previous definitions. Drug Saf. 32:99-110
-
(2009)
Drug Saf
, vol.32
, pp. 99-110
-
-
Hauben, M.1
Aronson, J.K.2
-
30
-
-
0036300732
-
Use of screening algorithms and computer systems to efficiently signal higher-than-expected combinations of drugs and events in the US FDA's spontaneous reports database
-
Szarfman A, Machado SG, O'Neill RT. 2002. Use of screening algorithms and computer systems to efficiently signal higher-than-expected combinations of drugs and events in the US FDA's spontaneous reports database. Drug Saf. 25:381-92
-
(2002)
Drug Saf
, vol.25
, pp. 381-392
-
-
Szarfman, A.1
MacHado, S.G.2
O'Neill, R.T.3
-
31
-
-
79953035873
-
Phenobarbital mediates an epigenetic switch at the constitutive androstane receptor (CAR) target gene Cyp2b10 in the liver of B6C3F1 mice
-
Lempiainen H, Muller A, Brasa S, Teo SS, Roloff TC, et al. 2011. Phenobarbital mediates an epigenetic switch at the constitutive androstane receptor (CAR) target gene Cyp2b10 in the liver of B6C3F1 mice. PLoS ONE 6:e18216
-
(2011)
PLoS ONE
, vol.6
-
-
Lempiainen, H.1
Muller, A.2
Brasa, S.3
Teo, S.S.4
Roloff, T.C.5
-
32
-
-
80755125565
-
Comprehensive assay of kinase catalytic activity reveals features of kinase inhibitor selectivity
-
Anastassiadis T, Deacon SW, Devarajan K, Ma H, Peterson JR. 2011. Comprehensive assay of kinase catalytic activity reveals features of kinase inhibitor selectivity. Nat. Biotechnol. 29:1039-45
-
(2011)
Nat. Biotechnol
, vol.29
, pp. 1039-1045
-
-
Anastassiadis, T.1
Deacon, S.W.2
Devarajan, K.3
Ma, H.4
Peterson, J.R.5
-
33
-
-
84856104973
-
A novel preclinical strategy for identifying cardiotoxic kinase inhibitors and mechanisms of cardiotoxicity
-
Cheng H, Kari G, Dicker AP, Rodeck U, Koch WJ, Force T. 2011. A novel preclinical strategy for identifying cardiotoxic kinase inhibitors and mechanisms of cardiotoxicity. Circ. Res. 109:1401-9
-
(2011)
Circ. Res
, vol.109
, pp. 1401-1409
-
-
Cheng, H.1
Kari, G.2
Dicker, A.P.3
Rodeck, U.4
Koch, W.J.5
Force, T.6
-
34
-
-
84859861800
-
Statins as a possible cause of inflammatory and necrotizing myopathies
-
Padala S, Thompson PD. 2012. Statins as a possible cause of inflammatory and necrotizing myopathies. Atherosclerosis 222:15-21
-
(2012)
Atherosclerosis
, vol.222
, pp. 15-21
-
-
Padala, S.1
Thompson, P.D.2
-
35
-
-
32344440237
-
Analysis of drug-induced effect patterns to link structure and side effects of medicines
-
Fliri AF, Loging WT, Thadeio PF, Volkmann RA. 2005. Analysis of drug-induced effect patterns to link structure and side effects of medicines. Nat. Chem. Biol. 1:389-97
-
(2005)
Nat. Chem. Biol
, vol.1
, pp. 389-397
-
-
Fliri, A.F.1
Loging, W.T.2
Thadeio, P.F.3
Volkmann, R.A.4
-
36
-
-
77954230951
-
Drug-target interaction prediction from chemical, genomic and pharmacological data in an integrated framework
-
Yamanishi Y, Kotera M, Kanehisa M, Goto S. 2010. Drug-target interaction prediction from chemical, genomic and pharmacological data in an integrated framework. Bioinformatics 26:i246-54
-
(2010)
Bioinformatics
, vol.26
-
-
Yamanishi, Y.1
Kotera, M.2
Kanehisa, M.3
Goto, S.4
-
37
-
-
67650657838
-
Definition, conservation and epigenetics of housekeeping and tissue-enriched genes
-
She X, Rohl CA, Castle JC, Kulkarni AV, Johnson JM, Chen R. 2009. Definition, conservation and epigenetics of housekeeping and tissue-enriched genes. BMC Genomics 10:269
-
(2009)
BMC Genomics
, vol.10
, pp. 269
-
-
She, X.1
Rohl, C.A.2
Castle, J.C.3
Kulkarni, A.V.4
Johnson, J.M.5
Chen, R.6
-
39
-
-
70449634957
-
Predicting new molecular targets for known drugs
-
Keiser MJ, Setola V, Irwin JJ, Laggner C, Abbas AI, et al. 2009. Predicting new molecular targets for known drugs. Nature 462:175-81
-
(2009)
Nature
, vol.462
, pp. 175-181
-
-
Keiser, M.J.1
Setola, V.2
Irwin, J.J.3
Laggner, C.4
Abbas, A.I.5
-
40
-
-
72949116422
-
Fragment-based prediction of the clinical occurrence of longQTsyndrome and torsade de pointes
-
ClarkM, Wiseman JS. 2009. Fragment-based prediction of the clinical occurrence of longQTsyndrome and torsade de pointes. J. Chem. Inf. Model. 49:2617-26
-
(2009)
J. Chem. Inf. Model
, vol.49
, pp. 2617-2626
-
-
Clark, M.1
Wiseman, J.S.2
-
41
-
-
77953811317
-
Prediction of adverse drug reactions using decision tree modeling
-
Hammann F, Gutmann H, Vogt N, Helma C, Drewe J. 2010. Prediction of adverse drug reactions using decision tree modeling. Clin. Pharmacol. Ther. 88:52-59
-
(2010)
Clin. Pharmacol. Ther
, vol.88
, pp. 52-59
-
-
Hammann, F.1
Gutmann, H.2
Vogt, N.3
Helma, C.4
Drewe, J.5
-
42
-
-
77951213013
-
Modeling liver-related adverse effects of drugs using k nearest neighbor quantitative structure-activity relationship method
-
Rodgers AD, Zhu H, Fourches D, Rusyn I, Tropsha A. 2010. Modeling liver-related adverse effects of drugs using k nearest neighbor quantitative structure-activity relationship method. Chem. Res. Toxicol. 23:724-32
-
(2010)
Chem. Res. Toxicol
, vol.23
, pp. 724-732
-
-
Rodgers, A.D.1
Zhu, H.2
Fourches, D.3
Rusyn, I.4
Tropsha, A.5
-
43
-
-
84255172340
-
Predicting adverse drug events using pharmacological network models
-
Cami A, Arnold A, Manzi S, Reis B. 2011. Predicting adverse drug events using pharmacological network models. Sci. Transl. Med. 3:114ra27
-
(2011)
Sci. Transl. Med
, vol.3
-
-
Cami, A.1
Arnold, A.2
Manzi, S.3
Reis, B.4
-
44
-
-
40049100210
-
Analysis of pharmacology data and the prediction of adverse drug reactions and off-target effects from chemical structure
-
Bender A, Scheiber J, Glick M, Davies JW, Azzaoui K, et al. 2007. Analysis of pharmacology data and the prediction of adverse drug reactions and off-target effects from chemical structure. ChemMedChem 2:861-73
-
(2007)
Chem Med Chem
, vol.2
, pp. 861-873
-
-
Bender, A.1
Scheiber, J.2
Glick, M.3
Davies, J.W.4
Azzaoui, K.5
-
45
-
-
80051727852
-
Predicting drug-induced hepatotoxicity using QSAR and toxicogenomics approaches
-
Low Y, Uehara T, Minowa Y, Yamada H, Ohno Y, et al. 2011. Predicting drug-induced hepatotoxicity using QSAR and toxicogenomics approaches. Chem. Res. Toxicol. 24:1251-62
-
(2011)
Chem. Res. Toxicol
, vol.24
, pp. 1251-1262
-
-
Low, Y.1
Uehara, T.2
Minowa, Y.3
Yamada, H.4
Ohno, Y.5
-
46
-
-
40949111469
-
Development of a phospholipidosis database and predictive quantitative structure-activity relationship (QSAR) models
-
Kruhlak NL, Choi SS, Contrera JF, Weaver JL, Willard JM, et al. 2008. Development of a phospholipidosis database and predictive quantitative structure-activity relationship (QSAR) models. Toxicol. Mech. Methods 18:217-27
-
(2008)
Toxicol. Mech. Methods
, vol.18
, pp. 217-227
-
-
Kruhlak, N.L.1
Choi, S.S.2
Contrera, J.F.3
Weaver, J.L.4
Willard, J.M.5
-
47
-
-
0038670579
-
The human phenome project
-
Freimer N, Sabatti C. 2003. The human phenome project. Nat. Genet. 34:15-21
-
(2003)
Nat. Genet
, vol.34
, pp. 15-21
-
-
Freimer, N.1
Sabatti, C.2
-
48
-
-
30544439504
-
Creation and implications of a phenome-genome network
-
Butte AJ, Kohane IS. 2006. Creation and implications of a phenome-genome network. Nat. Biotechnol. 24:55-62
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 55-62
-
-
Butte, A.J.1
Kohane, I.S.2
-
49
-
-
38949122398
-
Phenomics: Building scaffolds for biological hypotheses in the post-genomic era
-
Bilder RM. 2008. Phenomics: building scaffolds for biological hypotheses in the post-genomic era. Biol. Psychiatry 63:439-40
-
(2008)
Biol. Psychiatry
, vol.63
, pp. 439-440
-
-
Bilder, R.M.1
-
50
-
-
84857263400
-
Generation and characterization of a mouse model of the metabolic syndrome: Apolipoprotein e and aromatase double knockout mice
-
Scott NJ, Cameron VA, Raudsepp S, Lewis LK, Simpson ER, et al. 2012. Generation and characterization of a mouse model of the metabolic syndrome: apolipoprotein E and aromatase double knockout mice. Am. J. Physiol. Endocrinol. Metab. 302:E576-84
-
(2012)
Am. J. Physiol. Endocrinol. Metab
, vol.302
-
-
Scott, N.J.1
Cameron, V.A.2
Raudsepp, S.3
Lewis, L.K.4
Simpson, E.R.5
-
51
-
-
67649202201
-
Population-based discovery of toxicogenomics biomarkers for hepatotoxicity using a laboratory strain diversity panel
-
Harrill AH, Ross PK, Gatti DM, Threadgill DW, Rusyn I. 2009. Population-based discovery of toxicogenomics biomarkers for hepatotoxicity using a laboratory strain diversity panel. Toxicol. Sci. 110:235-43
-
(2009)
Toxicol. Sci
, vol.110
, pp. 235-243
-
-
Harrill, A.H.1
Ross, P.K.2
Gatti, D.M.3
Threadgill, D.W.4
Rusyn, I.5
-
52
-
-
53049105071
-
Deletion of apoptosis signalregulating kinase 1 attenuates acetaminophen-induced liver injury by inhibiting c-JunN-terminal kinase activation
-
Nakagawa H, Maeda S, Hikiba Y, Ohmae T, Shibata W, et al. 2008. Deletion of apoptosis signalregulating kinase 1 attenuates acetaminophen-induced liver injury by inhibiting c-JunN-terminal kinase activation. Gastroenterology 135:1311-21
-
(2008)
Gastroenterology
, vol.135
, pp. 1311-1321
-
-
Nakagawa, H.1
Maeda, S.2
Hikiba, Y.3
Ohmae, T.4
Shibata, W.5
-
53
-
-
69749128688
-
Mouse population-guided resequencing reveals that variants in CD44 contribute to acetaminophen-induced liver injury in humans
-
Harrill AH, Watkins PB, Su S, Ross PK, Harbourt DE, et al. 2009. Mouse population-guided resequencing reveals that variants in CD44 contribute to acetaminophen-induced liver injury in humans. Genome Res. 19:1507-15
-
(2009)
Genome Res
, vol.19
, pp. 1507-1515
-
-
Harrill, A.H.1
Watkins, P.B.2
Su, S.3
Ross, P.K.4
Harbourt, D.E.5
-
54
-
-
79954582411
-
Humanized bone marrow mouse model as a preclinical tool to assess therapy-mediated hematotoxicity
-
Cai S, Wang H, Bailey B, Ernstberger A, Juliar BE, et al. 2011. Humanized bone marrow mouse model as a preclinical tool to assess therapy-mediated hematotoxicity. Clin. Cancer Res. 17:2195-206
-
(2011)
Clin. Cancer Res
, vol.17
, pp. 2195-2206
-
-
Cai, S.1
Wang, H.2
Bailey, B.3
Ernstberger, A.4
Juliar, B.E.5
-
55
-
-
79961066293
-
Humanized mice with ectopic artificial liver tissues
-
Chen AA, Thomas DK, Ong LL, Schwartz RE, Golub TR, Bhatia SN. 2011. Humanized mice with ectopic artificial liver tissues. Proc. Natl. Acad. Sci. USA 108:11842-47
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 11842-11847
-
-
Chen, A.A.1
Thomas, D.K.2
Ong, L.L.3
Schwartz, R.E.4
Golub, T.R.5
Bhatia, S.N.6
-
56
-
-
78049374383
-
Chimeric mice with humanized liver: Tools for the study of drug metabolism, excretion, and toxicity
-
Strom SC, Davila J, Grompe M. 2010. Chimeric mice with humanized liver: tools for the study of drug metabolism, excretion, and toxicity. Methods Mol. Biol. 640:491-509
-
(2010)
Methods Mol. Biol
, vol.640
, pp. 491-509
-
-
Strom, S.C.1
Davila, J.2
Grompe, M.3
-
57
-
-
55349087953
-
Discovery and implementation of transcriptional biomarkers of synthetic LXR agonists in peripheral blood cells
-
DiBlasio-Smith EA, Arai M, Quinet EM, Evans MJ, Kornaga T, et al. 2008. Discovery and implementation of transcriptional biomarkers of synthetic LXR agonists in peripheral blood cells. J. Transl. Med. 6:59
-
(2008)
J. Transl. Med
, vol.6
, pp. 59
-
-
Diblasio-Smith, E.A.1
Arai, M.2
Quinet, E.M.3
Evans, M.J.4
Kornaga, T.5
-
58
-
-
78649630186
-
The future of toxicity testing: A focus on in vitro methods using a quantitative high-throughput screening platform
-
Shukla SJ, Huang R, Austin CP, Xia M. 2010. The future of toxicity testing: a focus on in vitro methods using a quantitative high-throughput screening platform. Drug Discov. Today 15:997-1007
-
(2010)
Drug Discov. Today
, vol.15
, pp. 997-1007
-
-
Shukla, S.J.1
Huang, R.2
Austin, C.P.3
Xia, M.4
-
59
-
-
76749102991
-
The Japanese Toxicogenomics Project: Application of toxicogenomics
-
Uehara T, Ono A, Maruyama T, Kato I, Yamada H, et al. 2010. The Japanese Toxicogenomics Project: application of toxicogenomics. Mol. Nutr. Food Res. 54:218-27
-
(2010)
Mol. Nutr. Food Res
, vol.54
, pp. 218-227
-
-
Uehara, T.1
Ono, A.2
Maruyama, T.3
Kato, I.4
Yamada, H.5
-
60
-
-
84855766644
-
Drug targets: Single-cell transcriptomics hastens unbiased discovery
-
Bartfai T, Buckley PT, Eberwine J. 2012. Drug targets: single-cell transcriptomics hastens unbiased discovery. Trends Pharmacol. Sci. 33:9-16
-
(2012)
Trends Pharmacol. Sci
, vol.33
, pp. 9-16
-
-
Bartfai, T.1
Buckley, P.T.2
Eberwine, J.3
-
61
-
-
77953811724
-
Investigation of lowdose ritonavir on human peripheral blood mononuclear cells using gene expression whole genome microarrays
-
Yilmaz S, Boffito M, Collot-Teixeira S, De Lorenzo F, Waters L, et al. 2010. Investigation of lowdose ritonavir on human peripheral blood mononuclear cells using gene expression whole genome microarrays. Genomics 96:57-65
-
(2010)
Genomics
, vol.96
, pp. 57-65
-
-
Yilmaz, S.1
Boffito, M.2
Collot-Teixeira, S.3
De Lorenzo, F.4
Waters, L.5
-
62
-
-
73949157882
-
Network-based drugs and biomarkers
-
Erler JT, Linding R. 2010. Network-based drugs and biomarkers. J. Pathol. 220:290-96
-
(2010)
J. Pathol
, vol.220
, pp. 290-296
-
-
Erler, J.T.1
Linding, R.2
-
63
-
-
79958019911
-
Quantification of activated NF-κB/RelA complexes using ssDNA aptamer affinity-stable isotope dilution-selected reaction monitoringmass spectrometry
-
Zhao Y, Widen SG, Jamaluddin M, Tian B, Wood TG, et al. 2011. Quantification of activated NF-κB/RelA complexes using ssDNA aptamer affinity-stable isotope dilution-selected reaction monitoringmass spectrometry. Mol. Cell. Proteomics 10:M111.008771
-
(2011)
Mol. Cell. Proteomics
, vol.10
-
-
Zhao, Y.1
Widen, S.G.2
Jamaluddin, M.3
Tian, B.4
Wood, T.G.5
-
64
-
-
48749097278
-
Phase II study of sequentially administered low-dose mitomycin-C (MMC) and irinotecan (CPT-11) in women with metastatic breast cancer (MBC
-
Mrozek E, Kolesar J, Young D, Allen J, Villalona-Calero M, Shapiro CL. 2008. Phase II study of sequentially administered low-dose mitomycin-C (MMC) and irinotecan (CPT-11) in women with metastatic breast cancer (MBC). Ann. Oncol. 19:1417-22
-
(2008)
Ann. Oncol
, vol.19
, pp. 1417-1422
-
-
Mrozek, E.1
Kolesar, J.2
Young, D.3
Allen, J.4
Villalona-Calero, M.5
Shapiro, C.L.6
-
65
-
-
52049093474
-
A phase i pharmacokinetic and pharmacodynamic correlative study of the antisense Bcl-2 oligonucleotide g3139, in combination with carboplatin and paclitaxel, in patients with advanced solid tumors
-
Liu G, Kolesar J, McNeel DG, Leith C, Schell K, et al. 2008. A phase I pharmacokinetic and pharmacodynamic correlative study of the antisense Bcl-2 oligonucleotide g3139, in combination with carboplatin and paclitaxel, in patients with advanced solid tumors. Clin. Cancer Res. 14:2732-39
-
(2008)
Clin. Cancer Res
, vol.14
, pp. 2732-2739
-
-
Liu, G.1
Kolesar, J.2
McNeel, D.G.3
Leith, C.4
Schell, K.5
-
66
-
-
84867338003
-
Discovery and preclinical validation of drug indications using compendia of public gene expression data
-
Sirota M, Dudley JT, Kim J, Chiang AP, Morgan AA, et al. 2011. Discovery and preclinical validation of drug indications using compendia of public gene expression data. Sci. Transl. Med. 3:96ra77
-
(2011)
Sci. Transl. Med
, vol.3
-
-
Sirota, M.1
Dudley, J.T.2
Kim, J.3
Chiang, A.P.4
Morgan, A.A.5
-
67
-
-
84867338003
-
Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease
-
Dudley JT, Sirota M, Shenoy M, Pai RK, Roedder S, et al. 2011. Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease. Sci. Transl. Med. 3:96ra76
-
(2011)
Sci. Transl. Med
, vol.3
-
-
Dudley, J.T.1
Sirota, M.2
Shenoy, M.3
Pai, R.K.4
Roedder, S.5
-
68
-
-
7744223490
-
MicroRNA binding sites in Arabidopsis class III HD-ZIP mRNAs are required for methylation of the template chromosome
-
Bao N, Lye KW, Barton MK. 2004. MicroRNA binding sites in Arabidopsis class III HD-ZIP mRNAs are required for methylation of the template chromosome. Dev. Cell 7:653-62
-
(2004)
Dev. Cell
, vol.7
, pp. 653-662
-
-
Bao, N.1
Lye, K.W.2
Barton, M.K.3
-
69
-
-
33745813856
-
The cartilage specific microRNA-140 targets histone deacetylase 4 in mouse cells
-
Tuddenham L, Wheeler G, Ntounia-Fousara S, Waters J, Hajihosseini MK, et al. 2006. The cartilage specific microRNA-140 targets histone deacetylase 4 in mouse cells. FEBS Lett. 580:4214-17
-
(2006)
FEBS Lett
, vol.580
, pp. 4214-4217
-
-
Tuddenham, L.1
Wheeler, G.2
Ntounia-Fousara, S.3
Waters, J.4
Hajihosseini, M.K.5
-
70
-
-
33744805399
-
Specific activation ofmicroRNA-127 with downregulation of the proto-oncogene BCL6 by chromatin-modifying drugs in human cancer cells
-
Saito Y, Liang G, Egger G, Friedman JM, Chuang JC, et al. 2006. Specific activation ofmicroRNA-127 with downregulation of the proto-oncogene BCL6 by chromatin-modifying drugs in human cancer cells. Cancer Cell 9:435-43
-
(2006)
Cancer Cell
, vol.9
, pp. 435-443
-
-
Saito, Y.1
Liang, G.2
Egger, G.3
Friedman, J.M.4
Chuang, J.C.5
-
71
-
-
84858081410
-
'Omics analysis of low dose acetaminophen intake demonstrates novel response pathways in humans
-
Jetten MJ, Gaj S, Ruiz-Aracama A, de Kok TM, van Delft JH, et al. 2012. 'Omics analysis of low dose acetaminophen intake demonstrates novel response pathways in humans. Toxicol. Appl. Pharmacol. 259(3):320-28
-
(2012)
Toxicol. Appl. Pharmacol
, vol.259
, Issue.3
, pp. 320-328
-
-
Jetten, M.J.1
Gaj, S.2
Ruiz-Aracama, A.3
De Kok, T.4
Mvan Delft, J.H.5
-
72
-
-
35648945351
-
Changes of micro-RNA expression in rat liver treated by acetaminophen or carbon tetrachloride-regulating role of micro-RNA for RNA expression
-
Fukushima T, Hamada Y, Yamada H, Horii I. 2007. Changes of micro-RNA expression in rat liver treated by acetaminophen or carbon tetrachloride- regulating role of micro-RNA for RNA expression. J. Toxicol. Sci. 32:401-9
-
(2007)
J. Toxicol. Sci
, vol.32
, pp. 401-409
-
-
Fukushima, T.1
Hamada, Y.2
Yamada, H.3
Horii, I.4
-
73
-
-
84859838122
-
Benzo[a]pyreneinduced changes in microRNA-mRNA networks
-
Lizarraga D, Gaj S, Brauers KJ, Timmermans L, Kleinjans JC, van Delft JH. 2012. Benzo[a]pyreneinduced changes in microRNA-mRNA networks. Chem. Res. Toxicol. 25:838-49
-
(2012)
Chem. Res. Toxicol
, vol.25
, pp. 838-849
-
-
Lizarraga, D.1
Gaj, S.2
Brauers, K.J.3
Timmermans, L.4
Kleinjans, J.5
Cvan Delft, J.H.6
-
74
-
-
78649366701
-
Dynamic microRNA expression programs during cardiac differentiation of human embryonic stem cells: Role for miR-499
-
Wilson KD, Hu S, Venkatasubrahmanyam S, Fu JD, Sun N, et al. 2010. Dynamic microRNA expression programs during cardiac differentiation of human embryonic stem cells: role for miR-499. Circ. Cardiovasc. Genet. 3:426-35
-
(2010)
Circ. Cardiovasc. Genet
, vol.3
, pp. 426-435
-
-
Wilson, K.D.1
Hu, S.2
Venkatasubrahmanyam, S.3
Fu, J.D.4
Sun, N.5
-
75
-
-
3543004084
-
Systematic identification of abundant A-to-I editing sites in the human transcriptome
-
Levanon EY, Eisenberg E, Yelin R, Nemzer S, Hallegger M, et al. 2004. Systematic identification of abundant A-to-I editing sites in the human transcriptome. Nat. Biotechnol. 22:1001-5
-
(2004)
Nat. Biotechnol
, vol.22
, pp. 1001-1005
-
-
Levanon, E.Y.1
Eisenberg, E.2
Yelin, R.3
Nemzer, S.4
Hallegger, M.5
-
76
-
-
0035085519
-
RNA editing of the human serotonin 5-HT2C receptor: Alterations in suicide and implications for serotonergic pharmacotherapy
-
Niswender CM, Herrick-Davis K, Dilley GE, Meltzer HY, Overholser JC, et al. 2001. RNA editing of the human serotonin 5-HT2C receptor: alterations in suicide and implications for serotonergic pharmacotherapy. Neuropsychopharmacology: 24:478-91
-
(2001)
Neuropsychopharmacology
, vol.24
, pp. 478-491
-
-
Niswender, C.M.1
Herrick-Davis, K.2
Dilley, G.E.3
Meltzer, H.Y.4
Overholser, J.C.5
-
77
-
-
0037308871
-
Critical role of c-Jun N-terminal protein kinase activation in troglitazoneinduced apoptosis of human HepG2 hepatoma cells
-
Bae MA, Song BJ. 2003. Critical role of c-Jun N-terminal protein kinase activation in troglitazoneinduced apoptosis of human HepG2 hepatoma cells. Mol. Pharmacol. 63:401-8
-
(2003)
Mol. Pharmacol
, vol.63
, pp. 401-408
-
-
Bae, M.A.1
Song, B.J.2
-
78
-
-
84857788445
-
Large-scale mapping of human protein interactome using structural complexes
-
Tyagi M, Hashimoto K, Shoemaker BA, Wuchty S, Panchenko AR. 2012. Large-scale mapping of human protein interactome using structural complexes. EMBO Rep. 13:266-71
-
(2012)
EMBO Rep
, vol.13
, pp. 266-271
-
-
Tyagi, M.1
Hashimoto, K.2
Shoemaker, B.A.3
Wuchty, S.4
Panchenko, A.R.5
-
79
-
-
73249129425
-
Drug effects viewed from a signal transduction network perspective
-
Fliri AF, Loging WT, Volkmann RA. 2009. Drug effects viewed from a signal transduction network perspective. J. Med. Chem. 52:8038-46
-
(2009)
J. Med. Chem
, vol.52
, pp. 8038-8046
-
-
Fliri, A.F.1
Loging, W.T.2
Volkmann, R.A.3
-
80
-
-
79959643100
-
Translational bioinformatics: Linking knowledge across biological and clinical realms
-
Sarkar IN, Butte AJ, Lussier YA, Tarczy-Hornoch P, Ohno-Machado L. 2011. Translational bioinformatics: linking knowledge across biological and clinical realms. J. Am. Med. Inform. Assoc. 18:354-57
-
(2011)
J. Am. Med. Inform. Assoc
, vol.18
, pp. 354-357
-
-
Sarkar, I.N.1
Butte, A.J.2
Lussier, Y.A.3
Tarczy-Hornoch, P.4
Ohno-Machado, L.5
-
81
-
-
77958082168
-
Drug discovery in a multidimensional world: Systems, patterns, and networks
-
Dudley JT, Schadt E, Sirota M, Butte AJ, Ashley E. 2010. Drug discovery in a multidimensional world: systems, patterns, and networks. J. Cardiovasc. Transl. Res. 3:438-47
-
(2010)
J. Cardiovasc. Transl. Res
, vol.3
, pp. 438-447
-
-
Dudley, J.T.1
Schadt, E.2
Sirota, M.3
Butte, A.J.4
Ashley, E.5
-
82
-
-
33846910173
-
Global reconstruction of the human metabolic network based on genomic and bibliomic data
-
Duarte NC, Becker SA, Jamshidi N, Thiele I, Mo ML, et al. 2007. Global reconstruction of the human metabolic network based on genomic and bibliomic data. Proc. Natl. Acad. Sci. USA 104:1777-82
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 1777-1782
-
-
Duarte, N.C.1
Becker, S.A.2
Jamshidi, N.3
Thiele, I.4
Mo, M.L.5
-
83
-
-
77953593640
-
Cytokine-associated drug toxicity in human hepatocytes is associated with signaling network dysregulation
-
Cosgrove BD, Alexopoulos LG, Hang TC, Hendriks BS, Sorger PK, et al. 2010. Cytokine-associated drug toxicity in human hepatocytes is associated with signaling network dysregulation. Mol. BioSyst. 6:1195-206
-
(2010)
Mol. BioSyst
, vol.6
, pp. 1195-1206
-
-
Cosgrove, B.D.1
Alexopoulos, L.G.2
Hang, T.C.3
Hendriks, B.S.4
Sorger, P.K.5
-
84
-
-
79959926410
-
DRAR-CPI: A server for identifying drug repositioning potential and adverse drug reactions via the chemical-protein interactome
-
Luo H, Chen J, Shi L, Mikailov M, Zhu H, et al. 2011. DRAR-CPI: a server for identifying drug repositioning potential and adverse drug reactions via the chemical-protein interactome. Nucleic Acids Res. 39:W492-98
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Luo, H.1
Chen, J.2
Shi, L.3
Mikailov, M.4
Zhu, H.5
-
85
-
-
68249128647
-
Harvesting candidate genes responsible for serious adverse drug reactions from a chemical-protein interactome
-
Yang L, Chen J, He L. 2009. Harvesting candidate genes responsible for serious adverse drug reactions from a chemical-protein interactome. PLoS Comput. Biol. 5:e1000441
-
(2009)
PLoS Comput. Biol
, vol.5
-
-
Yang, L.1
Chen, J.2
He, L.3
-
86
-
-
79953669856
-
Exploring off-targets and off-systems for adverse drug reactions via chemical-protein interactome-clozapine-induced agranulocytosis as a case study
-
Yang L, Wang K, Chen J, Jegga AG, Luo H, et al. 2011. Exploring off-targets and off-systems for adverse drug reactions via chemical-protein interactome-clozapine-induced agranulocytosis as a case study. PLoS Comput. Biol. 7:e1002016
-
(2011)
PLoS Comput. Biol
, vol.7
-
-
Yang, L.1
Wang, K.2
Chen, J.3
Jegga, A.G.4
Luo, H.5
-
87
-
-
77957954504
-
A structure-based approach for mapping adverse drug reactions to the perturbation of underlying biological pathways
-
Wallach I, Jaitly N, Lilien R. 2010. A structure-based approach for mapping adverse drug reactions to the perturbation of underlying biological pathways. PLoS ONE 5:e12063
-
(2010)
PLoS ONE
, vol.5
-
-
Wallach, I.1
Jaitly, N.2
Lilien, R.3
-
88
-
-
77952742187
-
Kinase inhibition-related adverse events predicted from in vitro kinome and clinical trial data
-
Yang X, Huang Y, Crowson M, Li J, Maitland ML, Lussier YA. 2010. Kinase inhibition-related adverse events predicted from in vitro kinome and clinical trial data. J. Biomed. Inform. 43:376-84
-
(2010)
J. Biomed. Inform
, vol.43
, pp. 376-384
-
-
Yang, X.1
Huang, Y.2
Crowson, M.3
Li, J.4
Maitland, M.L.5
Lussier, Y.A.6
-
90
-
-
84859085369
-
Identification and pathway mapping of furan target proteins reveal mitochondrial energy production and redox regulation as critical targets of furan toxicity
-
Moro S, Chipman JK, Antczak P, Turan N, Dekant W, et al. 2012. Identification and pathway mapping of furan target proteins reveal mitochondrial energy production and redox regulation as critical targets of furan toxicity. Toxicol. Sci. 126:336-52
-
(2012)
Toxicol. Sci
, vol.126
, pp. 336-352
-
-
Moro, S.1
Chipman, J.K.2
Antczak, P.3
Turan, N.4
Dekant, W.5
-
91
-
-
0029859494
-
Troglitazone inhibits fatty acid oxidation and esterification, and gluconeogenesis in isolated hepatocytes from starved rats
-
Fulgencio JP, Kohl C, Girard J, Pegorier JP. 1996. Troglitazone inhibits fatty acid oxidation and esterification, and gluconeogenesis in isolated hepatocytes from starved rats. Diabetes 45:1556-62
-
(1996)
Diabetes
, vol.45
, pp. 1556-1562
-
-
Fulgencio, J.P.1
Kohl, C.2
Girard, J.3
Pegorier, J.P.4
-
92
-
-
0029553537
-
Effect of troglitazone (CS-045) and bezafibrate on glucose tolerance, liver glycogen synthase activity, and β-oxidation in fructose-fed rats
-
Inoue I, Takahashi K, Katayama S, Harada Y, Negishi K, et al. 1995. Effect of troglitazone (CS-045) and bezafibrate on glucose tolerance, liver glycogen synthase activity, and β-oxidation in fructose-fed rats. Metabolism 44:1626-30
-
(1995)
Metabolism
, vol.44
, pp. 1626-1630
-
-
Inoue, I.1
Takahashi, K.2
Katayama, S.3
Harada, Y.4
Negishi, K.5
-
93
-
-
40449112930
-
Large-scale chemical dissection of mitochondrial function
-
Wagner BK, Kitami T, Gilbert TJ, Peck D, Ramanathan A, et al. 2008. Large-scale chemical dissection of mitochondrial function. Nat. Biotechnol. 26:343-51
-
(2008)
Nat. Biotechnol
, vol.26
, pp. 343-351
-
-
Wagner, B.K.1
Kitami, T.2
Gilbert, T.J.3
Peck, D.4
Ramanathan, A.5
-
94
-
-
0019423856
-
Sequence and organization of the human mitochondrial genome
-
Anderson S, Bankier AT, Barrell BG, de Bruijn MH, Coulson AR, et al. 1981. Sequence and organization of the human mitochondrial genome. Nature 290:457-65
-
(1981)
Nature
, vol.290
, pp. 457-465
-
-
Anderson, S.1
Bankier, A.T.2
Barrell, B.3
Gde Bruijn, M.H.4
Coulson, A.R.5
-
95
-
-
70349407736
-
Increased sensitivity for troglitazone-induced cytotoxicity using a human in vitro co-culture model
-
Edling Y, Sivertsson LK, Butura A, Ingelman-Sundberg M, Ek M. 2009. Increased sensitivity for troglitazone-induced cytotoxicity using a human in vitro co-culture model. Toxicol. In Vitro 23:1387-95
-
(2009)
Toxicol. in Vitro
, vol.23
, pp. 1387-1395
-
-
Edling, Y.1
Sivertsson, L.K.2
Butura, A.3
Ingelman-Sundberg, M.4
Ek, M.5
-
96
-
-
0042069941
-
Co-culture of endothelial cells and smooth muscle cells affects gene expression of angiogenic factors
-
Heydarkhan-Hagvall S, Helenius G, Johansson BR, Li JY, Mattsson E, Risberg B. 2003. Co-culture of endothelial cells and smooth muscle cells affects gene expression of angiogenic factors. J. Cell. Biochem. 89:1250-59
-
(2003)
J. Cell. Biochem
, vol.89
, pp. 1250-1259
-
-
Heydarkhan-Hagvall, S.1
Helenius, G.2
Johansson, B.R.3
Li, J.Y.4
Mattsson, E.5
Risberg, B.6
-
97
-
-
34250664640
-
Cardiac fibroblasts influence cardiomyocyte phenotype in vitro
-
LaFramboise WA, Scalise D, Stoodley P, Graner SR, Guthrie RD, et al. 2007. Cardiac fibroblasts influence cardiomyocyte phenotype in vitro. Am. J. Physiol. Cell Physiol. 292:C1799-808
-
(2007)
Am. J. Physiol. Cell Physiol
, vol.292
-
-
Laframboise, W.A.1
Scalise, D.2
Stoodley, P.3
Graner, S.R.4
Guthrie, R.D.5
-
98
-
-
79961194518
-
Integrated proteomic and transcriptomic investigation of the acetaminophen toxicity in liver microfluidic biochip
-
Prot JM, Briffaut AS, Letourneur F, Chafey P, Merlier F, et al. 2011. Integrated proteomic and transcriptomic investigation of the acetaminophen toxicity in liver microfluidic biochip. PLoS ONE 6:e21268
-
(2011)
PLoS ONE
, vol.6
-
-
Prot, J.M.1
Briffaut, A.S.2
Letourneur, F.3
Chafey, P.4
Merlier, F.5
-
99
-
-
38049011979
-
Microscale culture of human liver cells for drug development
-
Khetani SR, Bhatia SN. 2008. Microscale culture of human liver cells for drug development. Nat. Biotechnol. 26:120-26
-
(2008)
Nat. Biotechnol
, vol.26
, pp. 120-126
-
-
Khetani, S.R.1
Bhatia, S.N.2
-
100
-
-
84858841248
-
Metabolomics-on-a-chip and predictive systems toxicology in microfluidic bioartificial organs
-
Shintu L, Baudoin R, Navratil V, Prot JM, Pontoizeau C, et al. 2012. Metabolomics-on-a-chip and predictive systems toxicology in microfluidic bioartificial organs. Anal. Chem. 84:1840-48
-
(2012)
Anal. Chem
, vol.84
, pp. 1840-1848
-
-
Shintu, L.1
Baudoin, R.2
Navratil, V.3
Prot, J.M.4
Pontoizeau, C.5
-
101
-
-
77954038080
-
Reconstituting organ-level lung functions on a chip
-
Huh D, Matthews BD, Mammoto A, Montoya-Zavala M, Hsin HY, Ingber DE. 2010. Reconstituting organ-level lung functions on a chip. Science 328:1662-68
-
(2010)
Science
, vol.328
, pp. 1662-1668
-
-
Huh, D.1
Matthews, B.D.2
Mammoto, A.3
Montoya-Zavala, M.4
Hsin, H.Y.5
Ingber, D.E.6
-
102
-
-
0032752186
-
Dose-dependent localization of TCDD in isolated centrilobular and periportal hepatocytes
-
Santostefano MJ, Richardson VM, Walker NJ, Blanton J, Lindros KO, et al. 1999. Dose-dependent localization of TCDD in isolated centrilobular and periportal hepatocytes. Toxicol. Sci. 52:9-19
-
(1999)
Toxicol. Sci
, vol.52
, pp. 9-19
-
-
Santostefano, M.J.1
Richardson, V.M.2
Walker, N.J.3
Blanton, J.4
Lindros, K.O.5
-
103
-
-
70449529313
-
Acute doxorubicin cardiotoxicity alters cardiac cytochrome P450 expression and arachidonic acid metabolism in rats
-
Zordoky BN, Anwar-Mohamed A, Aboutabl ME, El-Kadi AO. 2010. Acute doxorubicin cardiotoxicity alters cardiac cytochrome P450 expression and arachidonic acid metabolism in rats. Toxicol. Appl. Pharmacol. 242:38-46
-
(2010)
Toxicol. Appl. Pharmacol
, vol.242
, pp. 38-46
-
-
Zordoky, B.N.1
Anwar-Mohamed, A.2
Aboutabl, M.E.3
El-Kadi, A.O.4
-
104
-
-
59649100174
-
Tissue slices for the evaluation of metabolism-based toxicity with the example of diclofenac
-
Vickers AE. 2009. Tissue slices for the evaluation of metabolism-based toxicity with the example of diclofenac. Chem. Biol. Interact. 179:9-16
-
(2009)
Chem. Biol. Interact
, vol.179
, pp. 9-16
-
-
Vickers, A.E.1
-
105
-
-
79960610491
-
Acute doxorubicin toxicity differentially alters cytochrome P450 expression and arachidonic acid metabolism in rat kidney and liver
-
Zordoky BN, Anwar-Mohamed A, Aboutabl ME, El-Kadi AO. 2011. Acute doxorubicin toxicity differentially alters cytochrome P450 expression and arachidonic acid metabolism in rat kidney and liver. Drug Metab. Dispos. 39:1440-50
-
(2011)
Drug Metab. Dispos
, vol.39
, pp. 1440-1450
-
-
Zordoky, B.N.1
Anwar-Mohamed, A.2
Aboutabl, M.E.3
El-Kadi, A.O.4
-
106
-
-
0032983504
-
Correlation between serum levels of cardiac troponin-T and the severity of the chronic cardiomyopathy induced by doxorubicin
-
Herman EH, Zhang J, Lipshultz SE, Rifai N, Chadwick D, et al. 1999. Correlation between serum levels of cardiac troponin-T and the severity of the chronic cardiomyopathy induced by doxorubicin. J. Clin. Oncol. 17:2237-43
-
(1999)
J. Clin. Oncol
, vol.17
, pp. 2237-2243
-
-
Herman, E.H.1
Zhang, J.2
Lipshultz, S.E.3
Rifai, N.4
Chadwick, D.5
-
107
-
-
35748935092
-
Comparison of midregional pro-atrial natriuretic peptide with N-terminal pro-B-type natriuretic peptide in predicting survival in patients with chronic heart failure
-
von Haehling S, Jankowska EA, Morgenthaler NG, Vassanelli C, Zanolla L, et al. 2007. Comparison of midregional pro-atrial natriuretic peptide with N-terminal pro-B-type natriuretic peptide in predicting survival in patients with chronic heart failure. J. Am. Coll. Cardiol. 50:1973-80
-
(2007)
J. Am. Coll. Cardiol
, vol.50
, pp. 1973-1980
-
-
Von Haehling, S.1
Jankowska, E.A.2
Morgenthaler, N.G.3
Vassanelli, C.4
Zanolla, L.5
-
108
-
-
84860382951
-
The distant organ effects of acute kidney injury
-
Grams ME, Rabb H. 2012. The distant organ effects of acute kidney injury. Kidney Int. 81:942-48
-
(2012)
Kidney Int
, vol.81
, pp. 942-948
-
-
Grams, M.E.1
Rabb, H.2
-
109
-
-
84859787086
-
Novel markers of kidney function as predictors of ESRD, cardiovascular disease, and mortality in the general population
-
Astor BC, Shafi T, Hoogeveen RC, Matsushita K, Ballantyne CM, et al. 2012. Novel markers of kidney function as predictors of ESRD, cardiovascular disease, and mortality in the general population. Am. J. Kidney Dis. 59:653-62
-
(2012)
Am. J. Kidney Dis
, vol.59
, pp. 653-662
-
-
Astor, B.C.1
Shafi, T.2
Hoogeveen, R.C.3
Matsushita, K.4
Ballantyne, C.M.5
-
110
-
-
0031425839
-
AICA riboside increases AMP-activated protein kinase, fatty acid oxidation, and glucose uptake in rat muscle
-
Merrill GF, Kurth EJ, Hardie DG, Winder WW. 1997. AICA riboside increases AMP-activated protein kinase, fatty acid oxidation, and glucose uptake in rat muscle.Am. J. Physiol. Endocrinol.Metab. 273:E1107-12
-
(1997)
Am. J. Physiol. Endocrinol. Metab
, vol.273
-
-
Merrill, G.F.1
Kurth, E.J.2
Hardie, D.G.3
Winder, W.W.4
-
111
-
-
35349024283
-
Involvement of AMP-activated protein kinase in beneficial effects of betaine on high-sucrose diet-induced hepatic steatosis
-
Song Z, Deaciuc I, Zhou Z, Song M, Chen T, et al. 2007. Involvement of AMP-activated protein kinase in beneficial effects of betaine on high-sucrose diet-induced hepatic steatosis. Am. J. Physiol. Gastrointest. Liver Physiol. 293:G894-902
-
(2007)
Am. J. Physiol. Gastrointest. Liver Physiol
, vol.293
-
-
Song, Z.1
Deaciuc, I.2
Zhou, Z.3
Song, M.4
Chen, T.5
-
112
-
-
80053497734
-
AMPK mediates the initiation of kidney disease induced by a high-fat diet
-
Decleves AE, Mathew AV, Cunard R, Sharma K. 2011. AMPK mediates the initiation of kidney disease induced by a high-fat diet. J. Am. Soc. Nephrol. 22:1846-55
-
(2011)
J. Am. Soc. Nephrol
, vol.22
, pp. 1846-1855
-
-
Decleves, A.E.1
Mathew, A.V.2
Cunard, R.3
Sharma, K.4
-
113
-
-
17744420209
-
Adiponectin ismarkedly increased in patients with nephrotic syndrome and is related to metabolic risk factors
-
Zoccali C, Mallamaci F, Panuccio V, TripepiG, Cutrupi S, et al. 2003. Adiponectin ismarkedly increased in patients with nephrotic syndrome and is related to metabolic risk factors. Kidney Int. Suppl. 84:S98-102
-
(2003)
Kidney Int. Suppl
, vol.84
-
-
Zoccali, C.1
Mallamaci, F.2
Panuccio, V.3
Tripepigcutrupi, S.4
-
114
-
-
79953692673
-
Mechanisms of drug-induced liver injury: From bedside to bench
-
Tujios S, Fontana RJ. 2011. Mechanisms of drug-induced liver injury: from bedside to bench. Nat. Rev. Gastroenterol. Hepatol. 8:202-11
-
(2011)
Nat. Rev. Gastroenterol. Hepatol
, vol.8
, pp. 202-211
-
-
Tujios, S.1
Fontana, R.J.2
-
116
-
-
0035126136
-
Cholestatic potential of troglitazone as a possible factor contributing to troglitazone-induced hepatotoxicity: In vivo and in vitro interaction at the canalicular bile salt export pump (Bsep) in the rat
-
Funk C, Ponelle C, Scheuermann G, Pantze M. 2001. Cholestatic potential of troglitazone as a possible factor contributing to troglitazone-induced hepatotoxicity: in vivo and in vitro interaction at the canalicular bile salt export pump (Bsep) in the rat. Mol. Pharmacol. 59:627-35
-
(2001)
Mol. Pharmacol
, vol.59
, pp. 627-635
-
-
Funk, C.1
Ponelle, C.2
Scheuermann, G.3
Pantze, M.4
-
117
-
-
33745758229
-
C-Jun N-terminal kinase plays a major role in murine acetaminophen hepatotoxicity
-
Gunawan BK, Liu ZX, Han D, Hanawa N, Gaarde WA, Kaplowitz N. 2006. c-Jun N-terminal kinase plays a major role in murine acetaminophen hepatotoxicity. Gastroenterology 131:165-78
-
(2006)
Gastroenterology
, vol.131
, pp. 165-178
-
-
Gunawan, B.K.1
Liu, Z.X.2
Han, D.3
Hanawa, N.4
Gaarde, W.A.5
Kaplowitz, N.6
-
119
-
-
21744447422
-
Risk of cholestatic liver disease associated with flucloxacillin and flucloxacillin prescribing habits in the UK: Cohort study using data from the UK General Practice Research Database
-
Russmann S, Kaye JA, Jick SS, Jick H. 2005. Risk of cholestatic liver disease associated with flucloxacillin and flucloxacillin prescribing habits in the UK: cohort study using data from the UK General Practice Research Database. Br. J. Clin. Pharmacol. 60:76-82
-
(2005)
Br. J. Clin. Pharmacol
, vol.60
, pp. 76-82
-
-
Russmann, S.1
Kaye, J.A.2
Jick, S.S.3
Jick, H.4
-
120
-
-
79959268547
-
The implications of relationships between human diseases and metabolic subpathways
-
Li X, Li C, Shang D, Li J, Han J, et al. 2011. The implications of relationships between human diseases and metabolic subpathways. PLoS ONE 6:e21131
-
(2011)
PLoS ONE
, vol.6
-
-
Li, X.1
Li, C.2
Shang, D.3
Li, J.4
Han, J.5
-
121
-
-
78049445175
-
Drug off-target effects predicted using structural analysis in the context of a metabolic network model
-
Chang RL, Xie L, Bourne PE, Palsson BO. 2010. Drug off-target effects predicted using structural analysis in the context of a metabolic network model. PLoS Comput. Biol. 6:e1000938
-
(2010)
PLoS Comput. Biol
, vol.6
-
-
Chang, R.L.1
Xie, L.2
Bourne, P.E.3
Palsson, B.O.4
-
123
-
-
79955138219
-
Comparative gene expression profiles induced by PPARγand PPARα/γagonists in human hepatocytes
-
Rogue A, Lambert C, Josse R, Antherieu S, Spire C, et al. 2011. Comparative gene expression profiles induced by PPARγand PPARα/γagonists in human hepatocytes. PLoS ONE 6:e18816
-
(2011)
PLoS ONE
, vol.6
-
-
Rogue, A.1
Lambert, C.2
Josse, R.3
Antherieu, S.4
Spire, C.5
-
124
-
-
72849107786
-
Signaling pathways controlling pluripotency and early cell fate decisions of human induced pluripotent stem cells
-
VallierL, Touboul T, Brown S, Cho C, Bilican B, et al. 2009. Signaling pathways controlling pluripotency and early cell fate decisions of human induced pluripotent stem cells. Stem Cells 27:2655-66
-
(2009)
Stem Cells
, vol.27
, pp. 2655-2666
-
-
Vallier, L.1
Touboul, T.2
Brown, S.3
Cho, C.4
Bilican, B.5
-
125
-
-
70349560566
-
Phenomics: The systematic study of phenotypes on a genome-wide scale
-
Bilder RM, Sabb FW, Cannon TD, London ED, Jentsch JD, et al. 2009. Phenomics: the systematic study of phenotypes on a genome-wide scale. Neuroscience 164:30-42
-
(2009)
Neuroscience
, vol.164
, pp. 30-42
-
-
Bilder, R.M.1
Sabb, F.W.2
Cannon, T.D.3
London, E.D.4
Jentsch, J.D.5
-
126
-
-
63049123830
-
Ontology-driven indexing of public datasets for translational bioinformatics
-
Shah NH, Jonquet C, Chiang AP, Butte AJ, Chen R, Musen MA. 2009. Ontology-driven indexing of public datasets for translational bioinformatics. BMC Bioinform. 10(Suppl. 2):S1
-
(2009)
BMC Bioinform
, vol.10
, Issue.SUPPL. 2
-
-
Shah, N.H.1
Jonquet, C.2
Chiang, A.P.3
Butte, A.J.4
Chen, R.5
Musen, M.A.6
-
127
-
-
70349881426
-
Comparison of concept recognizers for building the Open Biomedical Annotator
-
Shah NH, Bhatia N, Jonquet C, Rubin D, Chiang AP, Musen MA. 2009. Comparison of concept recognizers for building the Open Biomedical Annotator. BMC Bioinform. 10(Suppl. 9):S14
-
(2009)
BMC Bioinform
, vol.10
, Issue.SUPPL. 9
-
-
Shah, N.H.1
Bhatia, N.2
Jonquet, C.3
Rubin, D.4
Chiang, A.P.5
Musen, M.A.6
-
128
-
-
80052033833
-
Ontology-based Brucella vaccine literature indexing and systematic analysis of gene-vaccine association network
-
Hur J, Xiang Z, Feldman EL, He Y. 2011. Ontology-based Brucella vaccine literature indexing and systematic analysis of gene-vaccine association network. BMC Immunol. 12:49
-
(2011)
BMC Immunol
, vol.12
, pp. 49
-
-
Hur, J.1
Xiang, Z.2
Feldman, E.L.3
He, Y.4
-
129
-
-
33745795732
-
The comparative toxicogenomics database: A cross-species resource for building chemical-gene interaction networks
-
Mattingly CJ, Rosenstein MC, Davis AP, Colby GT, Forrest JN Jr, Boyer JL. 2006. The comparative toxicogenomics database: a cross-species resource for building chemical-gene interaction networks. Toxicol. Sci. 92:587-95
-
(2006)
Toxicol. Sci
, vol.92
, pp. 587-595
-
-
Mattingly, C.J.1
Rosenstein, M.C.2
Davis, A.P.3
Colby, G.T.4
Forrest Jr., J.N.5
Boyer, J.L.6
-
132
-
-
84856074693
-
Demonstration of blind quantum computing
-
Barz S, Kashefi E, Broadbent A, Fitzsimons JF, Zeilinger A, Walther P. 2012. Demonstration of blind quantum computing. Science 335:303-8
-
(2012)
Science
, vol.335
, pp. 303-308
-
-
Barz, S.1
Kashefi, E.2
Broadbent, A.3
Fitzsimons, J.F.4
Zeilinger, A.5
Walther, P.6
-
133
-
-
84855570561
-
Transcriptome-based differentiation of closely-related Miscanthus lines
-
Chouvarine P, Cooksey AM, McCarthy FM, Ray DA, Baldwin BS, et al. 2012. Transcriptome-based differentiation of closely-related Miscanthus lines. PLoS ONE 7:e29850
-
(2012)
PLoS ONE
, vol.7
-
-
Chouvarine, P.1
Cooksey, A.M.2
McCarthy, F.M.3
Ray, D.A.4
Baldwin, B.S.5
-
136
-
-
77954290404
-
PhenoHM: Human-mouse comparative phenome-genome server
-
Sardana D, Vasa S, Vepachedu N, Chen J, Gudivada RC, et al. 2010. PhenoHM: human-mouse comparative phenome-genome server. Nucleic Acids Res. 38:W165-74
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Sardana, D.1
Vasa, S.2
Vepachedu, N.3
Chen, J.4
Gudivada, R.C.5
-
137
-
-
84891376664
-
Finding genome-transcriptome-phenome association with structured association mapping and visualization in GenAMap
-
Curtis RE, Yin J, Kinnaird P, Xing EP. 2012. Finding genome- transcriptome-phenome association with structured association mapping and visualization in GenAMap. Pac. Symp. Biocomput. 2012:327-38
-
(2012)
Pac. Symp. Biocomput
, vol.2012
, pp. 327-338
-
-
Curtis, R.E.1
Yin, J.2
Kinnaird, P.3
Xing, E.P.4
-
138
-
-
79957718860
-
Phenome-transcriptome correlation unravels anxiety and depression related pathways
-
Gormanns P, Mueller NS, Ditzen C, Wolf S, Holsboer F, Turck CW. 2011. Phenome-transcriptome correlation unravels anxiety and depression related pathways. J. Psychiatr. Res. 45:973-79
-
(2011)
J. Psychiatr. Res
, vol.45
, pp. 973-979
-
-
Gormanns, P.1
Mueller, N.S.2
Ditzen, C.3
Wolf, S.4
Holsboer, F.5
Turck, C.W.6
-
140
-
-
80055080543
-
A phenomics-based strategy identifies loci on APOC1, BRAP, and PLCG1 associated with metabolic syndrome phenotype domains
-
Avery CL, He Q, North KE, Ambite JL, Boerwinkle E, et al. 2011. A phenomics-based strategy identifies loci on APOC1, BRAP, and PLCG1 associated with metabolic syndrome phenotype domains. PLoS Genet. 7:e1002322
-
(2011)
PLoS Genet
, vol.7
-
-
Avery, C.L.1
He, Q.2
North, K.E.3
Ambite, J.L.4
Boerwinkle, E.5
-
141
-
-
84867332154
-
Linking PharmGKB to phenotype studies and animal models of disease for drug repurposing
-
Hoehndorf R, Oellrich A, Rebholz-Schuhmann D, Schofield PN, Gkoutos GV. 2012. Linking PharmGKB to phenotype studies and animal models of disease for drug repurposing. Pac. Symp. Biocomput. 2012:388-99
-
(2012)
Pac. Symp. Biocomput
, vol.2012
, pp. 388-399
-
-
Hoehndorf, R.1
Oellrich, A.2
Rebholz-Schuhmann, D.3
Schofield, P.N.4
Gkoutos, G.V.5
-
142
-
-
77951454093
-
The need for precompetitive integrative bionetwork disease model building
-
Friend SH. 2010. The need for precompetitive integrative bionetwork disease model building. Clin. Pharmacol. Ther. 87:536-39
-
(2010)
Clin. Pharmacol. Ther
, vol.87
, pp. 536-539
-
-
Friend, S.H.1
-
143
-
-
62749161471
-
The liver toxicity biomarker study: Phase i design and preliminary results
-
McBurney RN, Hines WM, Von Tungeln LS, Schnackenberg LK, Beger RD, et al. 2009. The liver toxicity biomarker study: phase I design and preliminary results. Toxicol. Pathol. 37:52-64
-
(2009)
Toxicol. Pathol
, vol.37
, pp. 52-64
-
-
McBurney, R.N.1
Hines, W.M.2
Von Tungeln, L.S.3
Schnackenberg, L.K.4
Beger, R.D.5
-
144
-
-
79953727844
-
EU framework 6 project: Predictive Toxicology (PredTox)-overview and outcome
-
Suter L, Schroeder S, Meyer K, Gautier JC, Amberg A, et al. 2011. EU framework 6 project: Predictive Toxicology (PredTox)-overview and outcome. Toxicol. Appl. Pharmacol. 252:73-84
-
(2011)
Toxicol. Appl. Pharmacol
, vol.252
, pp. 73-84
-
-
Suter, L.1
Schroeder, S.2
Meyer, K.3
Gautier, J.C.4
Amberg, A.5
|