-
1
-
-
0035931097
-
Further defining housekeeping, or "maintenance," genes Focus on "A compendium of gene expression in normal human tissues"
-
11773595
-
Butte AJ Dzau VJ Glueck SB Further defining housekeeping, or "maintenance," genes Focus on "A compendium of gene expression in normal human tissues" Physiol Genomics 2001, 7(2):95-96. 11773595
-
(2001)
Physiol Genomics
, vol.7
, Issue.2
, pp. 95-96
-
-
Butte, A.J.1
Dzau, V.J.2
Glueck, S.B.3
-
2
-
-
0038692119
-
Human housekeeping genes are compact
-
10.1016/S0168-9525(03)00140-9 12850439
-
Eisenberg E Levanon EY Human housekeeping genes are compact Trends Genet 2003, 19(7):362-365. 10.1016/S0168-9525(03)00140-9 12850439
-
(2003)
Trends Genet
, vol.19
, Issue.7
, pp. 362-365
-
-
Eisenberg, E.1
Levanon, E.Y.2
-
3
-
-
4744355710
-
Compactness of human housekeeping genes: Selection for economy or genomic design?
-
10.1016/j.tig.2004.03.006 15109779
-
Vinogradov AE Compactness of human housekeeping genes: Selection for economy or genomic design? Trends Genet 2004, 20(5):248-253. 10.1016/ j.tig.2004.03.006 15109779
-
(2004)
Trends Genet
, vol.20
, Issue.5
, pp. 248-253
-
-
Vinogradov, A.E.1
-
4
-
-
0036613754
-
Clustering of housekeeping genes provides a unified model of gene order in the human genome
-
10.1038/ng887 11992122
-
Lercher MJ Urrutia AO Hurst LD Clustering of housekeeping genes provides a unified model of gene order in the human genome Nat Genet 2002, 31(2):180-183. 10.1038/ng887 11992122
-
(2002)
Nat Genet
, vol.31
, pp. 180-183
-
-
Lercher, M.J.1
Urrutia, A.O.2
Hurst, L.D.3
-
5
-
-
1542286776
-
Mammalian housekeeping genes evolve more slowly than tissue-specific genes
-
10.1093/molbev/msh010 14595094
-
Zhang L Li WH Mammalian housekeeping genes evolve more slowly than tissue-specific genes Mol Biol Evol 2004, 21(2):236-239. 10.1093/molbev/ msh010 14595094
-
(2004)
Mol Biol Evol
, vol.21
, Issue.2
, pp. 236-239
-
-
Zhang, L.1
Li, W.H.2
-
6
-
-
33750515669
-
Chromatin structure and epigenetics
-
10.1016/j.bcp.2006.06.016 16836980
-
Quina AS Buschbeck M Di Croce L Chromatin structure and epigenetics Biochem Pharmacol 2006, 72(11):1563-1569. 10.1016/j.bcp.2006.06.016 16836980
-
(2006)
Biochem Pharmacol
, vol.72
, Issue.11
, pp. 1563-1569
-
-
Quina, A.S.1
Buschbeck, M.2
Di Croce, L.3
-
7
-
-
0345357773
-
Gene silencing in cancer in association with promoter hypermethylation
-
10.1056/NEJMra023075 14627790
-
Herman JG Baylin SB Gene silencing in cancer in association with promoter hypermethylation N Engl J Med 2003, 349(21):2042-2054. 10.1056/ NEJMra023075 14627790
-
(2003)
N Engl J Med
, vol.349
, Issue.21
, pp. 2042-2054
-
-
Herman, J.G.1
Baylin, S.B.2
-
8
-
-
33847070442
-
The role of chromatin during transcription
-
10.1016/j.cell.2007.01.015 17320508
-
Li B Carey M Workman JL The role of chromatin during transcription Cell 2007, 128(4):707-719. 10.1016/j.cell.2007.01.015 17320508
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 707-719
-
-
Li, B.1
Carey, M.2
Workman, J.L.3
-
9
-
-
33846482060
-
Chromatin structure in the genomics era
-
10.1016/j.tig.2006.12.002 17188397
-
Rando OJ Chromatin structure in the genomics era Trends Genet 2007, 23(2):67-73. 10.1016/j.tig.2006.12.002 17188397
-
(2007)
Trends Genet
, vol.23
, Issue.2
, pp. 67-73
-
-
Rando, O.J.1
-
10
-
-
39649122136
-
Cancer Epigenetics: Modifications, Screening, and Therapy
-
10.1146/annurev.med.59.061606.095816 17937590
-
Gal-Yam EN Saito Y Egger G Jones PA Cancer Epigenetics: Modifications, Screening, and Therapy Annual Review of Medicine 2008, 59:267-280. 10.1146/annurev.med.59.061606.095816 17937590
-
(2008)
Annual Review of Medicine
, vol.59
, pp. 267-280
-
-
Gal-Yam, E.N.1
Saito, Y.2
Egger, G.3
Jones, P.A.4
-
11
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
-
RESEARCH0034 126239 12184808 10.1186/gb-2002-3-7-research0034
-
Vandesompele J De Preter K Pattyn F Poppe B Van Roy N De Paepe A Speleman F Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes Genome Biol 2002, 3:7. RESEARCH0034 126239 12184808 10.1186/gb-2002-3-7-research0034
-
(2002)
Genome Biol
, vol.3
, pp. 7
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
De Paepe, A.6
Speleman, F.7
-
12
-
-
0035931072
-
A compendium of gene expression in normal human tissues
-
11773596
-
Hsiao LL Dangond F Yoshida T Hong R Jensen RV Misra J Dillon W Lee KF Clark KE Haverty P et al A compendium of gene expression in normal human tissues Physiological Genomics 2001, 7(2):97-104. 11773596
-
(2001)
Physiological Genomics
, vol.7
, Issue.2
, pp. 97-104
-
-
Hsiao, L.L.1
Dangond, F.2
Yoshida, T.3
Hong, R.4
Jensen, R.V.5
Misra, J.6
Dillon, W.7
Lee, K.F.8
Clark, K.E.9
Haverty, P.10
-
13
-
-
33644897576
-
Further understanding human disease genes by comparing with housekeeping genes and other genes
-
1397819 10.1186/1471-2164-7-31
-
Tu Z Wang L Xu M Zhou X Chen T Sun F Further understanding human disease genes by comparing with housekeeping genes and other genes BMC Genomics 2006, 7:31. 1397819 16504025 10.1186/1471-2164-7-31
-
(2006)
BMC Genomics
, vol.7
, pp. 31
-
-
Tu, Z.1
Wang, L.2
Xu, M.3
Zhou, X.4
Chen, T.5
Sun, F.6
-
14
-
-
33750959359
-
Mining housekeeping genes with a Naive Bayes classifier
-
1635426 17074078 10.1186/1471-2164-7-277
-
De Ferrari L Aitken S Mining housekeeping genes with a Naive Bayes classifier BMC Genomics 2006, 7:277. 1635426 17074078 10.1186/ 1471-2164-7-277
-
(2006)
BMC Genomics
, vol.7
, pp. 277
-
-
De Ferrari, L.1
Aitken, S.2
-
15
-
-
41149171125
-
Evidence based selection of housekeeping genes
-
1976390 10.1371/journal.pone.0000898
-
de Jonge HJ Fehrmann RS de Bont ES Hofstra RM Gerbens F Kamps WA de Vries EG Zee van der AG te Meerman GJ ter Elst A Evidence based selection of housekeeping genes PLoS ONE 2007, 2(9):e898. 1976390 17878933 10.1371/journal.pone.0000898
-
(2007)
PLoS ONE
, vol.2
, Issue.9
-
-
de Jonge, H.J.1
Fehrmann, R.S.2
de Bont, E.S.3
Hofstra, R.M.4
Gerbens, F.5
Kamps, W.A.6
de Vries, E.G.7
Zee, A.G.8
te Meerman, G.J.9
ter Elst, A.10
-
17
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
395923 10.1073/pnas.0400782101
-
Su AI Wiltshire T Batalov S Lapp H Ching KA Block D Zhang J Soden R Hayakawa M Kreiman G et al A gene atlas of the mouse and human protein-encoding transcriptomes Proc Natl Acad Sci USA 2004, 101(16):6062-6067. 395923 15075390 10.1073/pnas.0400782101
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.16
, pp. 6062-6067
-
-
Su, A.I.1
Wiltshire, T.2
Batalov, S.3
Lapp, H.4
Ching, K.A.5
Block, D.6
Zhang, J.7
Soden, R.8
Hayakawa, M.9
Kreiman, G.10
-
18
-
-
33947219859
-
The functional landscape of mouse gene expression
-
549719 15588312 10.1186/jbiol16
-
Zhang W Morris QD Chang R Shai O Bakowski MA Mitsakakis N Mohammad N Robinson MD Zirngibl R Somogyi E et al The functional landscape of mouse gene expression J Biol 2004, 3(5):21. 549719 15588312 10.1186/jbiol16
-
(2004)
J Biol
, vol.3
, Issue.5
, pp. 21
-
-
Zhang, W.1
Morris, Q.D.2
Chang, R.3
Shai, O.4
Bakowski, M.A.5
Mitsakakis, N.6
Mohammad, N.7
Robinson, M.D.8
Zirngibl, R.9
Somogyi, E.10
-
19
-
-
33745961113
-
Detecting and profiling tissue-selective genes
-
10.1152/physiolgenomics.00313.2005 16684803
-
Liang S Li Y Be X Howes S Liu W Detecting and profiling tissue-selective genes Physiol Genomics 2006, 26(2):158-162. 10.1152/ physiolgenomics.00313.2005 16684803
-
(2006)
Physiol Genomics
, vol.26
, Issue.2
, pp. 158-162
-
-
Liang, S.1
Li, Y.2
Be, X.3
Howes, S.4
Liu, W.5
-
20
-
-
39749149956
-
Housekeeping genes tend to show reduced upstream sequence conservation
-
2323216 10.1186/gb-2007-8-7-r140
-
Farre D Bellora N Mularoni L Messeguer X Alba MM Housekeeping genes tend to show reduced upstream sequence conservation Genome Biol 2007, 8(7):R140. 2323216 17626644 10.1186/gb-2007-8-7-r140
-
(2007)
Genome Biol
, vol.8
, Issue.7
-
-
Farre, D.1
Bellora, N.2
Mularoni, L.3
Messeguer, X.4
Alba, M.M.5
-
21
-
-
44349158988
-
How many human genes can be defined as housekeeping with current expression data?
-
2396180 18416810 10.1186/1471-2164-9-172
-
Zhu J He F Song S Wang J Yu J How many human genes can be defined as housekeeping with current expression data? BMC Genomics 2008, 9:172. 2396180 18416810 10.1186/1471-2164-9-172
-
(2008)
BMC Genomics
, vol.9
, pp. 172
-
-
Zhu, J.1
He, F.2
Song, S.3
Wang, J.4
Yu, J.5
-
22
-
-
0141742293
-
PANTHER: A library of protein families and subfamilies indexed by function
-
403709 10.1101/gr.772403
-
Thomas PD Campbell MJ Kejariwal A Mi H Karlak B Daverman R Diemer K Muruganujan A Narechania A PANTHER: A library of protein families and subfamilies indexed by function Genome Research 2003, 13(9):2129-2141. 403709 12952881 10.1101/gr.772403
-
(2003)
Genome Research
, vol.13
, Issue.9
, pp. 2129-2141
-
-
Thomas, P.D.1
Campbell, M.J.2
Kejariwal, A.3
Mi, H.4
Karlak, B.5
Daverman, R.6
Diemer, K.7
Muruganujan, A.8
Narechania, A.9
-
23
-
-
33846062023
-
Database resources of the National Center for Biotechnology Information
-
(Database) 1781113 17170002 10.1093/nar/gkl1031
-
Wheeler DL Barrett T Benson DA Bryant SH Canese K Chetvernin V Church DM DiCuccio M Edgar R Federhen S et al Database resources of the National Center for Biotechnology Information Nucleic Acids Research 2007, 35(Database):D5-12. 1781113 17170002 10.1093/nar/gkl1031
-
(2007)
Nucleic Acids Research
-
-
Wheeler, D.L.1
Barrett, T.2
Benson, D.A.3
Bryant, S.H.4
Canese, K.5
Chetvernin, V.6
Church, D.M.7
DiCuccio, M.8
Edgar, R.9
Federhen, S.10
-
24
-
-
52949138674
-
On the nature of human housekeeping genes
-
10.1016/j.tig.2008.08.004 18786740
-
Zhu J He F Hu S Yu J On the nature of human housekeeping genes Trends Genet 2008, 24(10):481-484. 10.1016/j.tig.2008.08.004 18786740
-
(2008)
Trends Genet
, vol.24
, Issue.10
, pp. 481-484
-
-
Zhu, J.1
He, F.2
Hu, S.3
Yu, J.4
-
25
-
-
0034831138
-
Segmental duplications: Organization and impact within the current human genome project assembly
-
311093 10.1101/gr.GR-1871R
-
Bailey JA Yavor AM Massa HF Trask BJ Eichler EE Segmental duplications: organization and impact within the current human genome project assembly Genome Research 2001, 11(6):1005-1017. 311093 11381028 10.1101/ gr.GR-1871R
-
(2001)
Genome Research
, vol.11
, Issue.6
, pp. 1005-1017
-
-
Bailey, J.A.1
Yavor, A.M.2
Massa, H.F.3
Trask, B.J.4
Eichler, E.E.5
-
26
-
-
33745175531
-
A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications
-
1457043 10.1101/gr.4949406
-
She X Liu G Ventura M Zhao S Misceo D Roberto R Cardone MF Rocchi M Green ED Archidiacano N et al A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications Genome Research 2006, 16(5):576-583. 1457043 16606706 10.1101/gr.4949406
-
(2006)
Genome Research
, vol.16
, Issue.5
, pp. 576-583
-
-
She, X.1
Liu, G.2
Ventura, M.3
Zhao, S.4
Misceo, D.5
Roberto, R.6
Cardone, M.F.7
Rocchi, M.8
Green, E.D.9
Archidiacano, N.10
-
27
-
-
33751329250
-
Global variation in copy number in the human genome
-
2669898 10.1038/nature05329
-
Redon R Ishikawa S Fitch KR Feuk L Perry GH Andrews TD Fiegler H Shapero MH Carson AR Chen W et al Global variation in copy number in the human genome Nature 2006, 444:7118-444. 454 2669898 17122850 10.1038/ nature05329
-
(2006)
Nature
, vol.444
, pp. 444-454
-
-
Redon, R.1
Ishikawa, S.2
Fitch, K.R.3
Feuk, L.4
Perry, G.H.5
Andrews, T.D.6
Fiegler, H.7
Shapero, M.H.8
Carson, A.R.9
Chen, W.10
-
28
-
-
38049055222
-
Genomic copy number and expression variation within the C57BL/6J inbred mouse strain
-
2134784 10.1101/gr.6927808
-
Watkins-Chow DE Pavan WJ Genomic copy number and expression variation within the C57BL/6J inbred mouse strain Genome Research 2008, 18(1):60-66. 2134784 18032724 10.1101/gr.6927808
-
(2008)
Genome Research
, vol.18
, Issue.1
, pp. 60-66
-
-
Watkins-Chow, D.E.1
Pavan, W.J.2
-
29
-
-
37049028328
-
Genomic copy number and expression patterns in testicular germ cell tumours
-
10.1038/sj.bjc.6604079 18059402
-
McIntyre A Summersgill B Lu YJ Missiaglia E Kitazawa S Oosterhuis JW Looijenga LH Shipley J Genomic copy number and expression patterns in testicular germ cell tumours Br J Cancer 2007, 97(12):1707-1712. 10.1038/ sj.bjc.6604079 18059402
-
(2007)
Br J Cancer
, vol.97
, Issue.12
, pp. 1707-1712
-
-
McIntyre, A.1
Summersgill, B.2
Lu, Y.J.3
Missiaglia, E.4
Kitazawa, S.5
Oosterhuis, J.W.6
Looijenga, L.H.7
Shipley, J.8
-
30
-
-
41149156431
-
Genome-wide DNA copy number analysis in pancreatic cancer using high-density single nucleotide polymorphism arrays
-
2492386 10.1038/sj.onc.1210832
-
Harada T Chelala C Bhakta V Chaplin T Caulee K Baril P Young BD Lemoine NR Genome-wide DNA copy number analysis in pancreatic cancer using high-density single nucleotide polymorphism arrays Oncogene 2008, 27(13):1951-1960. 2492386 17952125 10.1038/sj.onc.1210832
-
(2008)
Oncogene
, vol.27
, Issue.13
, pp. 1951-1960
-
-
Harada, T.1
Chelala, C.2
Bhakta, V.3
Chaplin, T.4
Caulee, K.5
Baril, P.6
Young, B.D.7
Lemoine, N.R.8
-
31
-
-
33745373606
-
Primate segmental duplications: Crucibles of evolution, diversity and disease
-
10.1038/nrg1895 16770338
-
Bailey JA Eichler EE Primate segmental duplications: Crucibles of evolution, diversity and disease Nat Rev Genet 2006, 7(7):552-564. 10.1038/nrg1895 16770338
-
(2006)
Nat Rev Genet
, vol.7
, Issue.7
, pp. 552-564
-
-
Bailey, J.A.1
Eichler, E.E.2
-
32
-
-
2542542256
-
Ultraconserved elements in the human genome
-
10.1126/science.1098119 15131266
-
Bejerano G Pheasant M Makunin I Stephen S Kent WJ Mattick JS Haussler D Ultraconserved elements in the human genome Science 2004, 304:5675-1321. 1325 10.1126/science.1098119 15131266
-
(2004)
Science
, vol.304
, pp. 1321-1325
-
-
Bejerano, G.1
Pheasant, M.2
Makunin, I.3
Stephen, S.4
Kent, W.J.5
Mattick, J.S.6
Haussler, D.7
-
33
-
-
0023216891
-
CpG islands in vertebrate genomes
-
10.1016/0022-2836(87)90689-9 3656447
-
Gardiner-Garden M Frommer M CpG islands in vertebrate genomes J Mol Biol 1987, 196(2):261-282. 10.1016/0022-2836(87)90689-9 3656447
-
(1987)
J Mol Biol
, vol.196
, Issue.2
, pp. 261-282
-
-
Gardiner-Garden, M.1
Frommer, M.2
-
34
-
-
19344368143
-
Genome-wide analysis reveals strong correlation between CpG islands with nearby transcription start sites of genes and their tissue specificity
-
10.1016/j.gene.2005.01.012 15784181
-
Yamashita R Suzuki Y Sugano S Nakai K Genome-wide analysis reveals strong correlation between CpG islands with nearby transcription start sites of genes and their tissue specificity Gene 2005, 350(2):129-136. 10.1016/j.gene.2005.01.012 15784181
-
(2005)
Gene
, vol.350
, Issue.2
, pp. 129-136
-
-
Yamashita, R.1
Suzuki, Y.2
Sugano, S.3
Nakai, K.4
-
35
-
-
30044449116
-
Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)
-
1356136 10.1101/gr.4074106
-
Crawford GE Holt IE Whittle J Webb BD Tai D Davis S Margulies EH Chen Y Bernat JA Ginsburg D et al Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS) Genome Research 2006, 16(1):123-131. 1356136 16344561 10.1101/gr.4074106
-
(2006)
Genome Research
, vol.16
, Issue.1
, pp. 123-131
-
-
Crawford, G.E.1
Holt, I.E.2
Whittle, J.3
Webb, B.D.4
Tai, D.5
Davis, S.6
Margulies, E.H.7
Chen, Y.8
Bernat, J.A.9
Ginsburg, D.10
-
36
-
-
0024263822
-
The formation and function of DNase I hypersensitive sites in the process of gene activation
-
3198625
-
Elgin SC The formation and function of DNase I hypersensitive sites in the process of gene activation J Biol Chem 1988, 263(36):19259-19262. 3198625
-
(1988)
J Biol Chem
, vol.263
, Issue.36
, pp. 19259-19262
-
-
Elgin, S.C.1
-
37
-
-
34548441932
-
Identification and characterization of cell type-specific and ubiquitous chromatin regulatory structures in the human genome
-
1950163 10.1371/journal.pgen.0030136
-
Xi H Shulha HP Lin JM Vales TR Fu Y Bodine DM McKay RD Chenoweth JG Tesar PJ Furey TS et al Identification and characterization of cell type-specific and ubiquitous chromatin regulatory structures in the human genome PLoS Genetics 2007, 3(8):e136. 1950163 17708682 10.1371/ journal.pgen.0030136
-
(2007)
PLoS Genetics
, vol.3
, Issue.8
-
-
Xi, H.1
Shulha, H.P.2
Lin, J.M.3
Vales, T.R.4
Fu, Y.5
Bodine, D.M.6
McKay, R.D.7
Chenoweth, J.G.8
Tesar, P.J.9
Furey, T.S.10
-
38
-
-
0037380209
-
Histone acetylation and deacetylation in yeast
-
10.1038/nrm1075 12671650
-
Kurdistani SK Grunstein M Histone acetylation and deacetylation in yeast Nat Rev Mol Cell Biol 2003, 4(4):276-284. 10.1038/nrm1075 12671650
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, Issue.4
, pp. 276-284
-
-
Kurdistani, S.K.1
Grunstein, M.2
-
39
-
-
19944430797
-
Genomic maps and comparative analysis of histone modifications in human and mouse
-
10.1016/j.cell.2005.01.001 15680324
-
Bernstein BE Kamal M Lindblad-Toh K Bekiranov S Bailey DK Huebert DJ McMahon S Karlsson EK Kulbokas EJ 3rd Gingeras TR et al Genomic maps and comparative analysis of histone modifications in human and mouse Cell 2005, 120(2):169-181. 10.1016/j.cell.2005.01.001 15680324
-
(2005)
Cell
, vol.120
, Issue.2
, pp. 169-181
-
-
Bernstein, B.E.1
Kamal, M.2
Lindblad-Toh, K.3
Bekiranov, S.4
Bailey, D.K.5
Huebert, D.J.6
McMahon, S.7
Karlsson, E.K.8
Kulbokas III, E.J.9
Gingeras, T.R.10
-
40
-
-
34447519218
-
Genomic analyses of transcription factor binding, histone acetylation, and gene expression reveal mechanistically distinct classes of estrogen-regulated promoters
-
17515612 1951957
-
Kininis M Chen BS Diehl AG Isaacs GD Zhang T Siepel AC Clark AG Kraus WL Genomic analyses of transcription factor binding, histone acetylation, and gene expression reveal mechanistically distinct classes of estrogen-regulated promoters Molecular and Cellular Biology 2007, 27(14):5090-5104. 17515612 10.1128/MCB.00083-07 1951957
-
(2007)
Molecular and Cellular Biology
, vol.27
, Issue.14
, pp. 5090-5104
-
-
Kininis, M.1
Chen, B.S.2
Diehl, A.G.3
Isaacs, G.D.4
Zhang, T.5
Siepel, A.C.6
Clark, A.G.7
Kraus, W.L.8
-
41
-
-
40449141957
-
Whole-genome maps of USF1 and USF2 binding and histone H3 acetylation reveal new aspects of promoter structure and candidate genes for common human disorders
-
2259102 18230803 10.1101/gr.6880908
-
Rada-Iglesias A Ameur A Kapranov P Enroth S Komorowski J Gingeras TR Wadelius C Whole-genome maps of USF1 and USF2 binding and histone H3 acetylation reveal new aspects of promoter structure and candidate genes for common human disorders Genome Research 2008, 18(3):380-392. 2259102 18230803 10.1101/gr.6880908
-
(2008)
Genome Research
, vol.18
, Issue.3
, pp. 380-392
-
-
Rada-Iglesias, A.1
Ameur, A.2
Kapranov, P.3
Enroth, S.4
Komorowski, J.5
Gingeras, T.R.6
Wadelius, C.7
-
42
-
-
32544456936
-
Histone acetylation and transcriptional regulation in the genome of Saccharomyces cerevisiae
-
10.1093/bioinformatics/bti823 16339282
-
Guo X Tatsuoka K Liu R Histone acetylation and transcriptional regulation in the genome of Saccharomyces cerevisiae Bioinformatics (Oxford, England) 2006, 22(4):392-399. 10.1093/bioinformatics/bti823 16339282
-
(2006)
Bioinformatics (Oxford, England)
, vol.22
, Issue.4
, pp. 392-399
-
-
Guo, X.1
Tatsuoka, K.2
Liu, R.3
-
43
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
10.1016/j.cell.2007.05.009 17512414
-
Barski A Cuddapah S Cui K Roh TY Schones DE Wang Z Wei G Chepelev I Zhao K High-resolution profiling of histone methylations in the human genome Cell 2007, 129(4):823-837. 10.1016/j.cell.2007.05.009 17512414
-
(2007)
Cell
, vol.129
, Issue.4
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.Y.4
Schones, D.E.5
Wang, Z.6
Wei, G.7
Chepelev, I.8
Zhao, K.9
-
44
-
-
42249092797
-
The role of CTCF in regulating nuclear organization
-
2292214 10.1084/jem.20080066
-
Williams A Flavell RA The role of CTCF in regulating nuclear organization The Journal of Experimental Medicine 2008, 205(4):747-750. 2292214 18347103 10.1084/jem.20080066
-
(2008)
The Journal of Experimental Medicine
, vol.205
, Issue.4
, pp. 747-750
-
-
Williams, A.1
Flavell, R.A.2
-
45
-
-
33745436025
-
Active chromatin hub of the mouse alpha-globin locus forms in a transcription factory of clustered housekeeping genes
-
16782894 10.1128/MCB.02454-05 1489176
-
Zhou GL Xin L Song W Di LJ Liu G Wu XS Liu DP Liang CC Active chromatin hub of the mouse alpha-globin locus forms in a transcription factory of clustered housekeeping genes Molecular and Cellular Biology 2006, 26(13):5096-5105. 16782894 10.1128/MCB.02454-05 1489176
-
(2006)
Molecular and Cellular Biology
, vol.26
, Issue.13
, pp. 5096-5105
-
-
Zhou, G.L.1
Xin, L.2
Song, W.3
Di, L.J.4
Liu, G.5
Wu, X.S.6
Liu, D.P.7
Liang, C.C.8
-
46
-
-
41949142533
-
Transcription and Chromatin Organization of a Housekeeping Gene Cluster Containing an Integrated beta-Globin Locus Control Region
-
2265466 10.1371/journal.pgen.1000016
-
Noordermeer D Branco MR Splinter E Klous P van Ijcken W Swagemakers S Koutsourakis M Spek van der P Pombo A de Laat W Transcription and Chromatin Organization of a Housekeeping Gene Cluster Containing an Integrated beta-Globin Locus Control Region PLoS Genetics 2008, 4(3):e1000016. 2265466 18369441 10.1371/journal.pgen.1000016
-
(2008)
PLoS Genetics
, vol.4
, Issue.3
-
-
Noordermeer, D.1
Branco, M.R.2
Splinter, E.3
Klous, P.4
van Ijcken, W.5
Swagemakers, S.6
Koutsourakis, M.7
Spek, P.8
Pombo, A.9
de Laat, W.10
-
47
-
-
33847047461
-
Epigenetics: A landscape takes shape
-
10.1016/j.cell.2007.02.006 17320500
-
Goldberg AD Allis CD Bernstein E Epigenetics: A landscape takes shape Cell 2007, 128(4):635-638. 10.1016/j.cell.2007.02.006 17320500
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 635-638
-
-
Goldberg, A.D.1
Allis, C.D.2
Bernstein, E.3
-
48
-
-
34047116826
-
Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome
-
10.1038/ng1990 17334365
-
Weber M Hellmann I Stadler MB Ramos L Paabo S Rebhan M Schubeler D Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome Nat Genet 2007, 39(4):457-466. 10.1038/ng1990 17334365
-
(2007)
Nat Genet
, vol.39
, pp. 457-466
-
-
Weber, M.1
Hellmann, I.2
Stadler, M.B.3
Ramos, L.4
Paabo, S.5
Rebhan, M.6
Schubeler, D.7
-
49
-
-
35948981875
-
Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters
-
2041996 10.1371/journal.pgen.0030181
-
Shen L Kondo Y Guo Y Zhang J Zhang L Ahmed S Shu J Chen X Waterland RA Issa JP Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters PLoS Genetics 2007, 3(10):2023-2036. 2041996 17967063 10.1371/journal.pgen.0030181
-
(2007)
PLoS Genetics
, vol.3
, Issue.10
, pp. 2023-2036
-
-
Shen, L.1
Kondo, Y.2
Guo, Y.3
Zhang, J.4
Zhang, L.5
Ahmed, S.6
Shu, J.7
Chen, X.8
Waterland, R.A.9
Issa, J.P.10
-
50
-
-
18444361838
-
DNA methylation and chromatin structure: The puzzling CpG islands
-
10.1002/jcb.20325 15546139
-
Caiafa P Zampieri M DNA methylation and chromatin structure: The puzzling CpG islands J Cell Biochem 2005, 94(2):257-265. 10.1002/ jcb.20325 15546139
-
(2005)
J Cell Biochem
, vol.94
, pp. 257-265
-
-
Caiafa, P.1
Zampieri, M.2
-
51
-
-
0036274359
-
The fundamental role of epigenetic events in cancer
-
12042769
-
Jones PA Baylin SB The fundamental role of epigenetic events in cancer Nat Rev Genet 2002, 3(6):415-428. 12042769
-
(2002)
Nat Rev Genet
, vol.3
, Issue.6
, pp. 415-428
-
-
Jones, P.A.1
Baylin, S.B.2
-
52
-
-
33847065486
-
The epigenomics of cancer
-
10.1016/j.cell.2007.01.029 17320506
-
Jones PA Baylin SB The epigenomics of cancer Cell 2007, 128(4):683-692. 10.1016/j.cell.2007.01.029 17320506
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 683-692
-
-
Jones, P.A.1
Baylin, S.B.2
-
53
-
-
0347623371
-
Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays
-
10.1126/science.1090100 14684825
-
Johnson JM Castle J Garrett-Engele P Kan Z Loerch PM Armour CD Santos R Schadt EE Stoughton R Shoemaker DD Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays Science 2003, 302(5653):2141-2144. 10.1126/science.1090100 14684825
-
(2003)
Science
, vol.302
, Issue.5653
, pp. 2141-2144
-
-
Johnson, J.M.1
Castle, J.2
Garrett-Engele, P.3
Kan, Z.4
Loerch, P.M.5
Armour, C.D.6
Santos, R.7
Schadt, E.E.8
Stoughton, R.9
Shoemaker, D.D.10
-
54
-
-
0347691435
-
Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing
-
328455 10.1186/gb-2003-4-10-r66
-
Castle J Garrett-Engele P Armour CD Duenwald SJ Loerch PM Meyer MR Schadt EE Stoughton R Parrish ML Shoemaker DD et al Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing Genome Biol 2003, 4(10):R66. 328455 14519201 10.1186/gb-2003-4-10-r66
-
(2003)
Genome Biol
, vol.4
-
-
Castle, J.1
Garrett-Engele, P.2
Armour, C.D.3
Duenwald, S.J.4
Loerch, P.M.5
Meyer, M.R.6
Schadt, E.E.7
Stoughton, R.8
Parrish, M.L.9
Shoemaker, D.D.10
|