메뉴 건너뛰기




Volumn 10, Issue 1, 2017, Pages

Hybridization and adaptive evolution of diverse Saccharomyces species for cellulosic biofuel production

Author keywords

AFEX pretreated corn stover hydrolysate (ACSH); Ammonia fiber expansion (AFEX); Biodiversity; Bioethanol; Hybridization; Hydrolysate toxins; Saccharomyces; Xylose

Indexed keywords

AMMONIA; BIODIVERSITY; BIOFUELS; BIOLOGY; BIOMASS; BREWING; ETHANOL; FERMENTATION; GENES; INDUSTRIAL RESEARCH; METABOLITES; PLANTS (BOTANY); XYLOSE; YEAST;

EID: 85018471286     PISSN: 17546834     EISSN: None     Source Type: Journal    
DOI: 10.1186/s13068-017-0763-7     Document Type: Article
Times cited : (55)

References (101)
  • 1
    • 84995742936 scopus 로고    scopus 로고
    • British Petroleum British Petroleum London
    • British Petroleum. BP statistical review of world energy. London: British Petroleum; 2016.
    • (2016) BP Statistical Review of World Energy
  • 2
    • 84960495556 scopus 로고    scopus 로고
    • Intergovernmental Panel on Climate Change Cambridge University Press New York
    • Intergovernmental Panel on Climate Change. Climate Change 2014: mitigation of climate change. New York: Cambridge University Press; 2015.
    • (2015) Climate Change 2014: Mitigation of Climate Change
  • 3
    • 84961922827 scopus 로고    scopus 로고
    • Fuelling the future: Microbial engineering for the production of sustainable biofuels
    • 1:CAS:528:DC%2BC28XltVaqsbk%3D
    • Liao JC, Mi L, Pontrelli S, Luo S. Fuelling the future: microbial engineering for the production of sustainable biofuels. Nat Rev Microbiol. 2016;14:288-304.
    • (2016) Nat Rev Microbiol , vol.14 , pp. 288-304
    • Liao, J.C.1    Mi, L.2    Pontrelli, S.3    Luo, S.4
  • 4
    • 74549126675 scopus 로고    scopus 로고
    • An overview of second generation biofuel technologies
    • 1:CAS:528:DC%2BD1MXhs1WlurnK
    • Sims REH, Mabee W, Saddler JN, Taylor M. An overview of second generation biofuel technologies. Bioresour Technol. 2010;101:1570-80.
    • (2010) Bioresour Technol , vol.101 , pp. 1570-1580
    • Sims, R.E.H.1    Mabee, W.2    Saddler, J.N.3    Taylor, M.4
  • 5
    • 12544249147 scopus 로고    scopus 로고
    • Inhibition of ethanol-producing yeast and bacteria by degradation products produced during pre-treatment of biomass
    • 1:CAS:528:DC%2BD2cXpsFKrtr0%3D
    • Klinke HB, Thomsen AB, Ahring BK. Inhibition of ethanol-producing yeast and bacteria by degradation products produced during pre-treatment of biomass. Appl Microbiol Biotechnol. 2004;66:10-26.
    • (2004) Appl Microbiol Biotechnol , vol.66 , pp. 10-26
    • Klinke, H.B.1    Thomsen, A.B.2    Ahring, B.K.3
  • 6
    • 17044443785 scopus 로고    scopus 로고
    • Fermentation of lignocellulosic hydrolysates for ethanol production
    • 1:CAS:528:DyaK28XhvV2ntrs%3D
    • Olsson L, Hahn-Hägerdal B. Fermentation of lignocellulosic hydrolysates for ethanol production. Enzyme Microb Technol. 1996;18:312-31.
    • (1996) Enzyme Microb Technol , vol.18 , pp. 312-331
    • Olsson, L.1    Hahn-Hägerdal, B.2
  • 7
    • 85030453277 scopus 로고    scopus 로고
    • Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover
    • 1:CAS:528:DC%2BC3sXhtlWgtL3E
    • Jin M, Sarks C, Gunawan C, Bice B, Simonett S, Narasimhan RA, Willis L, Dale B, Balan V, Sato T. Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover. Biotechnol Biofuels. 2013;6:108.
    • (2013) Biotechnol Biofuels , vol.6 , pp. 108
    • Jin, M.1    Sarks, C.2    Gunawan, C.3    Bice, B.4    Simonett, S.5    Narasimhan, R.A.6    Willis, L.7    Dale, B.8    Balan, V.9    Sato, T.10
  • 8
    • 33744914986 scopus 로고    scopus 로고
    • Engineering yeasts for xylose metabolism
    • 1:CAS:528:DC%2BD28Xls1aktL8%3D
    • Jeffries TW. Engineering yeasts for xylose metabolism. Curr Opin Biotechnol. 2006;17:320-6.
    • (2006) Curr Opin Biotechnol , vol.17 , pp. 320-326
    • Jeffries, T.W.1
  • 10
    • 60849102202 scopus 로고    scopus 로고
    • Cellulosic ethanol production from AFEX-treated corn stover using Saccharomyces cerevisiae 424A(LNH-ST)
    • 1:CAS:528:DC%2BD1MXhvV2qtLk%3D
    • Lau MW, Dale BE. Cellulosic ethanol production from AFEX-treated corn stover using Saccharomyces cerevisiae 424A(LNH-ST). Proc Natl Acad Sci USA. 2009;106:1368-73.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 1368-1373
    • Lau, M.W.1    Dale, B.E.2
  • 11
    • 84987841758 scopus 로고    scopus 로고
    • Aromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification
    • Keating DH, Zhang Y, Ong IM, McIlwain S, Morales EH, et al. Aromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification. Front Microbiol. 2014;5:402.
    • (2014) Front Microbiol , vol.5 , pp. 402
    • Keating, D.H.1    Zhang, Y.2    Ong, I.M.3    McIlwain, S.4    Morales, E.H.5
  • 13
    • 0033982072 scopus 로고    scopus 로고
    • Energetics of the effect of acetic acid on growth of Saccharomyces cerevisiae
    • 1:CAS:528:DC%2BD3cXht1OjurY%3D
    • Pampulha ME, Loureiro-Dias MC. Energetics of the effect of acetic acid on growth of Saccharomyces cerevisiae. FEMS Microbiol Lett. 2000;184:69-72.
    • (2000) FEMS Microbiol Lett , vol.184 , pp. 69-72
    • Pampulha, M.E.1    Loureiro-Dias, M.C.2
  • 14
    • 84926201540 scopus 로고    scopus 로고
    • Rapid evolution of recombinant Saccharomyces cerevisiae for xylose fermentation through formation of extra-chromosomal circular DNA
    • Demeke MM, Foulquié-Moreno MR, Dumortier F, Thevelein JM. Rapid evolution of recombinant Saccharomyces cerevisiae for xylose fermentation through formation of extra-chromosomal circular DNA. PLoS Genet. 2015;11:e1005010.
    • (2015) PLoS Genet , vol.11
    • Demeke, M.M.1    Foulquié-Moreno, M.R.2    Dumortier, F.3    Thevelein, J.M.4
  • 17
    • 84857446100 scopus 로고    scopus 로고
    • Effects of deletion of glycerol-3-phosphate dehydrogenase and glutamate dehydrogenase genes on glycerol and ethanol metabolism in recombinant Saccharomyces cerevisiae
    • Kim JW, Chin YW, Park YC, Seo JH. Effects of deletion of glycerol-3-phosphate dehydrogenase and glutamate dehydrogenase genes on glycerol and ethanol metabolism in recombinant Saccharomyces cerevisiae. Bioprocess Biosyst Eng. 2012;35:49-54.
    • (2012) Bioprocess Biosyst Eng , vol.35 , pp. 49-54
    • Kim, J.W.1    Chin, Y.W.2    Park, Y.C.3    Seo, J.H.4
  • 18
    • 84883114857 scopus 로고    scopus 로고
    • Combining inhibitor tolerance and d-xylose fermentation in industrial Saccharomyces cerevisiae for efficient lignocellulose-based bioethanol production
    • 1:CAS:528:DC%2BC3sXhvVegs77F
    • Demeke M, Dumortier F, Li Y, Broeckx T, Foulquie-Moreno M, Thevelein J. Combining inhibitor tolerance and d-xylose fermentation in industrial Saccharomyces cerevisiae for efficient lignocellulose-based bioethanol production. Biotechnol Biofuels. 2013;6:120.
    • (2013) Biotechnol Biofuels , vol.6 , pp. 120
    • Demeke, M.1    Dumortier, F.2    Li, Y.3    Broeckx, T.4    Foulquie-Moreno, M.5    Thevelein, J.6
  • 19
    • 84890317534 scopus 로고    scopus 로고
    • Construction of fast xylose-fermenting yeast based on industrial ethanol-producing diploid Saccharomyces cerevisiae by rational design and adaptive evolution
    • Diao L, Liu Y, Qian F, Yang J, Jiang Y, Yang S. Construction of fast xylose-fermenting yeast based on industrial ethanol-producing diploid Saccharomyces cerevisiae by rational design and adaptive evolution. BMC Biotechnol. 2013;13:110.
    • (2013) BMC Biotechnol , vol.13 , pp. 110
    • Diao, L.1    Liu, Y.2    Qian, F.3    Yang, J.4    Jiang, Y.5    Yang, S.6
  • 20
    • 0022504637 scopus 로고
    • Genealogy of principal strains of the yeast genetic stock center
    • 1:STN:280:DyaL283itFKltw%3D%3D
    • Mortimer RK, Johnston JR. Genealogy of principal strains of the yeast genetic stock center. Genetics. 1986;113:35-43.
    • (1986) Genetics , vol.113 , pp. 35-43
    • Mortimer, R.K.1    Johnston, J.R.2
  • 21
    • 80051973860 scopus 로고    scopus 로고
    • Comparative genomics of xylose-fermenting fungi for enhanced biofuel production
    • 1:CAS:528:DC%2BC3MXhtVKitL7I
    • Wohlbach DJ, Kuo A, Sato TK, Potts KM, Salamov AA, et al. Comparative genomics of xylose-fermenting fungi for enhanced biofuel production. Proc Natl Acad Sci USA. 2011;108:13212-7.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 13212-13217
    • Wohlbach, D.J.1    Kuo, A.2    Sato, T.K.3    Potts, K.M.4    Salamov, A.A.5
  • 25
    • 84907192238 scopus 로고    scopus 로고
    • Engineering and two-stage evolution of a lignocellulosic hydrolysate-tolerant Saccharomyces cerevisiae strain for anaerobic fermentation of xylose from AFEX pretreated corn stover
    • Parreiras LS, Breuer RJ, Narasimhan RA, Higbee AJ, La Reau A, Tremaine M, Qin L, Willis LB, Bice BD, Bonfert BL, et al. Engineering and two-stage evolution of a lignocellulosic hydrolysate-tolerant Saccharomyces cerevisiae strain for anaerobic fermentation of xylose from AFEX pretreated corn stover. PLoS ONE. 2014;9:e107499.
    • (2014) PLoS ONE , vol.9
    • Parreiras, L.S.1    Breuer, R.J.2    Narasimhan, R.A.3    Higbee, A.J.4    La Reau, A.5    Tremaine, M.6    Qin, L.7    Willis, L.B.8    Bice, B.D.9    Bonfert, B.L.10
  • 27
    • 84958109894 scopus 로고    scopus 로고
    • Multiplexed engineering in biology
    • 1:CAS:528:DC%2BC28Xislejsrs%3D
    • Rogers JK, Church GM. Multiplexed engineering in biology. Trends Biotechnol. 2016;34:198-206.
    • (2016) Trends Biotechnol , vol.34 , pp. 198-206
    • Rogers, J.K.1    Church, G.M.2
  • 28
    • 84883006832 scopus 로고    scopus 로고
    • The awesome power of yeast evolutionary genetics: New genome sequences and strain resources for the Saccharomyces sensu stricto genus
    • 1:CAS:528:DC%2BC38XltlOhsLk%3D
    • Scannell DR, Zill OA, Rokas A, Payen C, Dunham MJ, Eisen MB, Rine J, Johnston M, Hittinger CT. The awesome power of yeast evolutionary genetics: new genome sequences and strain resources for the Saccharomyces sensu stricto genus. G3. 2011;1:11-25.
    • (2011) G3 , vol.1 , pp. 11-25
    • Scannell, D.R.1    Zill, O.A.2    Rokas, A.3    Payen, C.4    Dunham, M.J.5    Eisen, M.B.6    Rine, J.7    Johnston, M.8    Hittinger, C.T.9
  • 29
    • 84876783002 scopus 로고    scopus 로고
    • Saccharomyces diversity and evolution: A budding model genus
    • 1:CAS:528:DC%2BC3sXit1yrsbo%3D
    • Hittinger CT. Saccharomyces diversity and evolution: a budding model genus. Trends Genet. 2013;29:309-17.
    • (2013) Trends Genet , vol.29 , pp. 309-317
    • Hittinger, C.T.1
  • 30
    • 33745736295 scopus 로고    scopus 로고
    • Yeasts illustrate the molecular mechanisms of eukaryotic genome evolution
    • 1:CAS:528:DC%2BD28XmslyksLw%3D
    • Dujon B. Yeasts illustrate the molecular mechanisms of eukaryotic genome evolution. Trends Genet. 2006;22:375-87.
    • (2006) Trends Genet , vol.22 , pp. 375-387
    • Dujon, B.1
  • 32
    • 77950863293 scopus 로고    scopus 로고
    • Remarkably ancient balanced polymorphisms in a multi-locus gene network
    • 1:CAS:528:DC%2BC3cXitFemtbk%3D
    • Hittinger CT, Gonçalves P, Sampaio JP, Dover J, Johnston M, Rokas A. Remarkably ancient balanced polymorphisms in a multi-locus gene network. Nature. 2010;464:54-8.
    • (2010) Nature , vol.464 , pp. 54-58
    • Hittinger, C.T.1    Gonçalves, P.2    Sampaio, J.P.3    Dover, J.4    Johnston, M.5    Rokas, A.6
  • 34
    • 84870698548 scopus 로고    scopus 로고
    • Evolutionary role of interspecies hybridization and genetic exchanges in yeasts
    • 1:CAS:528:DC%2BC3sXhsVOjtL0%3D
    • Morales L, Dujon B. Evolutionary role of interspecies hybridization and genetic exchanges in yeasts. Microbiol Mol Biol R. 2012;76:721-39.
    • (2012) Microbiol Mol Biol R , vol.76 , pp. 721-739
    • Morales, L.1    Dujon, B.2
  • 35
    • 65549086559 scopus 로고    scopus 로고
    • A yeast hybrid provides insight into the evolution of gene expression regulation
    • 1:CAS:528:DC%2BD1MXltFCisLo%3D
    • Tirosh I, Reikhav S, Levy AA, Barkai N. A yeast hybrid provides insight into the evolution of gene expression regulation. Science. 2009;324:659-62.
    • (2009) Science , vol.324 , pp. 659-662
    • Tirosh, I.1    Reikhav, S.2    Levy, A.A.3    Barkai, N.4
  • 36
    • 0031657475 scopus 로고    scopus 로고
    • New hybrids between Saccharomyces sensu stricto yeast species found among wine and cider production strains
    • 1:CAS:528:DyaK1cXms1entb0%3D
    • Masneuf I, Hansen J, Groth C, Piskur J, Dubourdieu D. New hybrids between Saccharomyces sensu stricto yeast species found among wine and cider production strains. Appl Environ Microbiol. 1998;64:3887-92.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 3887-3892
    • Masneuf, I.1    Hansen, J.2    Groth, C.3    Piskur, J.4    Dubourdieu, D.5
  • 37
    • 0034915593 scopus 로고    scopus 로고
    • Analysis of the constitution of the beer yeast genome by PCR, sequencing and subtelomeric sequence hybridization
    • 1:CAS:528:DC%2BD3MXmtVSls7c%3D
    • Casaregola S, Nguyen HV, Lapathitis G, Kotyk A, Gaillardin C. Analysis of the constitution of the beer yeast genome by PCR, sequencing and subtelomeric sequence hybridization. Int J Syst Evol Microbiol. 2001;51:1607-18.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 1607-1618
    • Casaregola, S.1    Nguyen, H.V.2    Lapathitis, G.3    Kotyk, A.4    Gaillardin, C.5
  • 38
    • 0036224855 scopus 로고    scopus 로고
    • Evidence for multiple interspecific hybridization in Saccharomyces sensu stricto species
    • Lopes MB, Bellon JR, Shirley NJ, Ganter PF. Evidence for multiple interspecific hybridization in Saccharomyces sensu stricto species. FEMS Yeast Res. 2002;1:323-31.
    • (2002) FEMS Yeast Res , vol.1 , pp. 323-331
    • Lopes, M.B.1    Bellon, J.R.2    Shirley, N.J.3    Ganter, P.F.4
  • 40
    • 53549098548 scopus 로고    scopus 로고
    • Reconstruction of the genome origins and evolution of the hybrid lager yeast Saccharomyces pastorianus
    • 1:CAS:528:DC%2BD1cXht1elu7zN
    • Dunn B, Sherlock G. Reconstruction of the genome origins and evolution of the hybrid lager yeast Saccharomyces pastorianus. Genome Res. 2008;18:1610-23.
    • (2008) Genome Res , vol.18 , pp. 1610-1623
    • Dunn, B.1    Sherlock, G.2
  • 41
    • 42349105178 scopus 로고    scopus 로고
    • Molecular characterization of new natural hybrids between S. cerevisiae and S. kudriavzevii from brewing
    • González SS, Barrio E, Querol A. Molecular characterization of new natural hybrids between S. cerevisiae and S. kudriavzevii from brewing. Appl Environ Microbiol. 2008;74:2314-20.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 2314-2320
    • González, S.S.1    Barrio, E.2    Querol, A.3
  • 42
    • 84856599123 scopus 로고    scopus 로고
    • The molecular characterization of new types of S. cerevisiae x S. kudriavzevii hybrid yeasts unveils a high genetic diversity
    • 1:CAS:528:DC%2BC38XjvVGlsA%3D%3D
    • Peris D, Belloch C, Lopandic K, Álvarez-Pérez JM, Querol A, Barrio E. The molecular characterization of new types of S. cerevisiae x S. kudriavzevii hybrid yeasts unveils a high genetic diversity. Yeast. 2012;29:81-91.
    • (2012) Yeast , vol.29 , pp. 81-91
    • Peris, D.1    Belloch, C.2    Lopandic, K.3    Álvarez-Pérez, J.M.4    Querol, A.5    Barrio, E.6
  • 43
    • 84866713711 scopus 로고    scopus 로고
    • Reconstruction of the evolutionary history of Saccharomyces cerevisiae x S. kudriavzevii hybrids based on multilocus sequence analysis
    • 1:CAS:528:DC%2BC38XhsVKgu7%2FK
    • Peris D, Lopes CA, Arias A, Barrio E. Reconstruction of the evolutionary history of Saccharomyces cerevisiae x S. kudriavzevii hybrids based on multilocus sequence analysis. PLoS ONE. 2012;7:e45527.
    • (2012) PLoS ONE , vol.7
    • Peris, D.1    Lopes, C.A.2    Arias, A.3    Barrio, E.4
  • 45
    • 84899119838 scopus 로고    scopus 로고
    • On the complexity of the Saccharomyces bayanus taxon: Hybridization and potential hybrid speciation
    • Pérez-Través L, Lopes CA, Querol A, Barrio E. On the complexity of the Saccharomyces bayanus taxon: hybridization and potential hybrid speciation. PLoS ONE. 2014;9:e93729.
    • (2014) PLoS ONE , vol.9
    • Pérez-Través, L.1    Lopes, C.A.2    Querol, A.3    Barrio, E.4
  • 47
    • 84865049155 scopus 로고    scopus 로고
    • Comparative genomics among Saccharomyces cerevisiae x Saccharomyces kudriavzevii natural hybrid strains isolated from wine and beer reveals different origins
    • 1:CAS:528:DC%2BC38XhslalsrjP
    • Peris D, Lopes CA, Belloch C, Querol A, Barrio E. Comparative genomics among Saccharomyces cerevisiae x Saccharomyces kudriavzevii natural hybrid strains isolated from wine and beer reveals different origins. BMC Genomics. 2012;13:407.
    • (2012) BMC Genomics , vol.13 , pp. 407
    • Peris, D.1    Lopes, C.A.2    Belloch, C.3    Querol, A.4    Barrio, E.5
  • 48
    • 39149094258 scopus 로고    scopus 로고
    • Fermentative stress adaptation of hybrids within the Saccharomyces sensu stricto complex
    • 1:CAS:528:DC%2BD1cXhslOmu7w%3D
    • Belloch C, Orlic S, Barrio E, Querol A. Fermentative stress adaptation of hybrids within the Saccharomyces sensu stricto complex. Int J Food Microbiol. 2008;122:188-95.
    • (2008) Int J Food Microbiol , vol.122 , pp. 188-195
    • Belloch, C.1    Orlic, S.2    Barrio, E.3    Querol, A.4
  • 49
    • 84880178341 scopus 로고    scopus 로고
    • Comparative physiology and fermentation performance of Saaz and Frohberg lager yeast strains and the parental species Saccharomyces eubayanus
    • 1:CAS:528:DC%2BC3sXhtVaitrbO
    • Gibson BR, Storgårds E, Krogerus K, Vidgren V. Comparative physiology and fermentation performance of Saaz and Frohberg lager yeast strains and the parental species Saccharomyces eubayanus. Yeast. 2013;30:255-66.
    • (2013) Yeast , vol.30 , pp. 255-266
    • Gibson, B.R.1    Storgårds, E.2    Krogerus, K.3    Vidgren, V.4
  • 51
    • 27744587351 scopus 로고    scopus 로고
    • Gradual genome stabilisation by progressive reduction of the Saccharomyces uvarum genome in an interspecific hybrid with Saccharomyces cerevisiae
    • 1:CAS:528:DC%2BD2MXht1SrurrL
    • Antunovics Z, Nguyen HV, Gaillardin C, Sipiczki M. Gradual genome stabilisation by progressive reduction of the Saccharomyces uvarum genome in an interspecific hybrid with Saccharomyces cerevisiae. FEMS Yeast Res. 2005;5:1141-50.
    • (2005) FEMS Yeast Res , vol.5 , pp. 1141-1150
    • Antunovics, Z.1    Nguyen, H.V.2    Gaillardin, C.3    Sipiczki, M.4
  • 52
    • 79955886783 scopus 로고    scopus 로고
    • Physiological and genetic stability of hybrids of industrial wine yeasts Saccharomyces sensu stricto complex
    • 1:CAS:528:DC%2BC3MXosVOktr8%3D
    • Kunicka-Styczynska A, Rajkowska K. Physiological and genetic stability of hybrids of industrial wine yeasts Saccharomyces sensu stricto complex. J Appl Microbiol. 2011;110:1538-49.
    • (2011) J Appl Microbiol , vol.110 , pp. 1538-1549
    • Kunicka-Styczynska, A.1    Rajkowska, K.2
  • 53
    • 84927667611 scopus 로고    scopus 로고
    • Stabilization process in Saccharomyces intra and interspecific hybrids in fermentative conditions
    • Pérez-Través L, Lopes C, Barrio E, Querol A. Stabilization process in Saccharomyces intra and interspecific hybrids in fermentative conditions. Int Microbiol. 2014;17:213-24.
    • (2014) Int Microbiol , vol.17 , pp. 213-224
    • Pérez-Través, L.1    Lopes, C.2    Barrio, E.3    Querol, A.4
  • 54
    • 33847259191 scopus 로고    scopus 로고
    • Allopatric divergence, secondary contact, and genetic isolation in wild yeast populations
    • 1:CAS:528:DC%2BD2sXisVChtLw%3D
    • Kuehne HA, Murphy HA, Francis CA, Sniegowski PD. Allopatric divergence, secondary contact, and genetic isolation in wild yeast populations. Curr Biol. 2007;17:407-11.
    • (2007) Curr Biol , vol.17 , pp. 407-411
    • Kuehne, H.A.1    Murphy, H.A.2    Francis, C.A.3    Sniegowski, P.D.4
  • 55
    • 42049085470 scopus 로고    scopus 로고
    • Natural populations of Saccharomyces kudriavzevii in Portugal are associated with oak bark and are sympatric with S. cerevisiae and S. paradoxus
    • 1:CAS:528:DC%2BD1cXks1anu7s%3D
    • Sampaio JP, Gonçalves P. Natural populations of Saccharomyces kudriavzevii in Portugal are associated with oak bark and are sympatric with S. cerevisiae and S. paradoxus. Appl Environ Microbiol. 2008;74:2144-52.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 2144-2152
    • Sampaio, J.P.1    Gonçalves, P.2
  • 59
    • 84896133784 scopus 로고    scopus 로고
    • Exploring the northern limit of the distribution of Saccharomyces cerevisiae and Saccharomyces paradoxus in North America
    • Charron G, Leducq JB, Bertin C, Dubé AK, Landry CR. Exploring the northern limit of the distribution of Saccharomyces cerevisiae and Saccharomyces paradoxus in North America. FEMS Yeast Res. 2013;14:281-8.
    • (2013) FEMS Yeast Res , vol.14 , pp. 281-288
    • Charron, G.1    Leducq, J.B.2    Bertin, C.3    Dubé, A.K.4    Landry, C.R.5
  • 61
    • 84934434829 scopus 로고    scopus 로고
    • Ecological genomics of adaptation and speciation in fungi
    • C.R. Landry N. Aubin-Horth editors. 781st ed. Springer Amsterdam
    • Leducq JB. Ecological genomics of adaptation and speciation in fungi. In: Landry CR, Aubin-Horth N, editors. Ecological genomics. 781st ed. Amsterdam: Springer; 2014. p. 49-72.
    • (2014) Ecological Genomics , pp. 49-72
    • Leducq, J.B.1
  • 63
    • 84954120141 scopus 로고    scopus 로고
    • Temperature and host preferences drive the diversification of Saccharomyces and other yeasts: A survey and the discovery of eight new yeast species
    • Sylvester K, Wang QM, James B, Mendez R, Hulfachor AB, Hittinger CT. Temperature and host preferences drive the diversification of Saccharomyces and other yeasts: a survey and the discovery of eight new yeast species. FEMS Yeast Res. 2015;15:1-16.
    • (2015) FEMS Yeast Res , vol.15 , pp. 1-16
    • Sylvester, K.1    Wang, Q.M.2    James, B.3    Mendez, R.4    Hulfachor, A.B.5    Hittinger, C.T.6
  • 64
    • 67651113635 scopus 로고    scopus 로고
    • Bioethanol production from wheat straw by the thermotolerant yeast Kluyveromyces marxianus CECT 10875 in a simultaneous saccharification and fermentation fed-batch process
    • Tomás-Pejó E, Oliva JM, González A, Ballesteros I, Ballesteros M. Bioethanol production from wheat straw by the thermotolerant yeast Kluyveromyces marxianus CECT 10875 in a simultaneous saccharification and fermentation fed-batch process. Fuel. 2009;88:2142-7.
    • (2009) Fuel , vol.88 , pp. 2142-2147
    • Tomás-Pejó, E.1    Oliva, J.M.2    González, A.3    Ballesteros, I.4    Ballesteros, M.5
  • 65
    • 76949105092 scopus 로고    scopus 로고
    • Evaluation of ammonia fibre expansion (AFEX) pretreatment for enzymatic hydrolysis of switchgrass harvested in different seasons and locations
    • Bals B, Rogers C, Jin M, Balan V, Dale B. Evaluation of ammonia fibre expansion (AFEX) pretreatment for enzymatic hydrolysis of switchgrass harvested in different seasons and locations. Biotechnol Biofuels. 2010;3:1.
    • (2010) Biotechnol Biofuels , vol.3 , pp. 1
    • Bals, B.1    Rogers, C.2    Jin, M.3    Balan, V.4    Dale, B.5
  • 66
    • 84960460639 scopus 로고    scopus 로고
    • Engineering cellular metabolism
    • 1:CAS:528:DC%2BC28XktFGqu7o%3D
    • Nielsen J, Keasling JD. Engineering cellular metabolism. Cell. 2016;164:1185-97.
    • (2016) Cell , vol.164 , pp. 1185-1197
    • Nielsen, J.1    Keasling, J.D.2
  • 67
    • 84878695412 scopus 로고    scopus 로고
    • Identification of multiple interacting alleles conferring low glycerol and high ethanol yield in Saccharomyces cerevisiae ethanolic fermentation
    • 1:CAS:528:DC%2BC3sXhtVGqtb7E
    • Hubmann G, Mathe L, Foulquie-Moreno M, Duitama J, Nevoigt E, Thevelein J. Identification of multiple interacting alleles conferring low glycerol and high ethanol yield in Saccharomyces cerevisiae ethanolic fermentation. Biotechnol Biofuels. 2013;6:87.
    • (2013) Biotechnol Biofuels , vol.6 , pp. 87
    • Hubmann, G.1    Mathe, L.2    Foulquie-Moreno, M.3    Duitama, J.4    Nevoigt, E.5    Thevelein, J.6
  • 68
    • 84874118739 scopus 로고    scopus 로고
    • Comparative functional genomics to reveal the molecular basis of phenotypic diversities and guide the genetic breeding of industrial yeast strains
    • 1:CAS:528:DC%2BC3sXitlCgs7Y%3D
    • Zheng DQ, Liu TZ, Chen J, Zhang K, Li O, Zhu L, Zhao YH, Wu XC, Wang PM. Comparative functional genomics to reveal the molecular basis of phenotypic diversities and guide the genetic breeding of industrial yeast strains. Appl Microbiol Biot. 2013;97:2067-76.
    • (2013) Appl Microbiol Biot , vol.97 , pp. 2067-2076
    • Zheng, D.Q.1    Liu, T.Z.2    Chen, J.3    Zhang, K.4    Li, O.5    Zhu, L.6    Zhao, Y.H.7    Wu, X.C.8    Wang, P.M.9
  • 69
    • 84922013769 scopus 로고    scopus 로고
    • Chemical genomic profiling via barcode sequencing to predict compound mode of action
    • J.E. Hempel C.H. Williams C.C. Hong editors. 1263rd ed. Springer New York
    • Piotrowski J, Simpkins S, Li S, Deshpande R, McIlwain S, Ong I, Myers C, Boone C, Andersen R. Chemical genomic profiling via barcode sequencing to predict compound mode of action. In: Hempel JE, Williams CH, Hong CC, editors. Chemical biology. 1263rd ed. New York: Springer; 2015. p. 299-318.
    • (2015) Chemical Biology , pp. 299-318
    • Piotrowski, J.1    Simpkins, S.2    Li, S.3    Deshpande, R.4    McIlwain, S.5    Ong, I.6    Myers, C.7    Boone, C.8    Andersen, R.9
  • 70
    • 84927666551 scopus 로고    scopus 로고
    • Physiological and genomic characterisation of Saccharomyces cerevisiae hybrids with improved fermentation performance and mannoprotein release capacity
    • Pérez-Través L, Lopes CA, González R, Barrio E, Querol A. Physiological and genomic characterisation of Saccharomyces cerevisiae hybrids with improved fermentation performance and mannoprotein release capacity. Int J Food Microbiol. 2015;205:30-40.
    • (2015) Int J Food Microbiol , vol.205 , pp. 30-40
    • Pérez-Través, L.1    Lopes, C.A.2    González, R.3    Barrio, E.4    Querol, A.5
  • 73
    • 84898605087 scopus 로고    scopus 로고
    • Sequencing and characterisation of rearrangements in three S. pastorianus strains reveals the presence of chimeric genes and gives evidence of breakpoint reuse
    • Hewitt SK, Donaldson IJ, Lovell SC, Delneri D. Sequencing and characterisation of rearrangements in three S. pastorianus strains reveals the presence of chimeric genes and gives evidence of breakpoint reuse. PLoS ONE. 2014;9:e92203.
    • (2014) PLoS ONE , vol.9
    • Hewitt, S.K.1    Donaldson, I.J.2    Lovell, S.C.3    Delneri, D.4
  • 74
    • 84960131150 scopus 로고    scopus 로고
    • Next-generation sequencing analysis of lager brewing yeast strains reveals the evolutionary history of interspecies hybridization
    • 1:CAS:528:DC%2BC28XhtlOks7bP
    • Okuno M, Kajitani R, Ryusui R, Morimoto H, Kodama Y, Itoh T. Next-generation sequencing analysis of lager brewing yeast strains reveals the evolutionary history of interspecies hybridization. DNA Res. 2016;23:67-80.
    • (2016) DNA Res , vol.23 , pp. 67-80
    • Okuno, M.1    Kajitani, R.2    Ryusui, R.3    Morimoto, H.4    Kodama, Y.5    Itoh, T.6
  • 76
    • 0037357446 scopus 로고    scopus 로고
    • Multiple hybrid formation in natural populations: Concerted evolution of the Internal Transcribed Spacer of nuclear ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae)
    • 1:CAS:528:DC%2BD3sXisFaqsro%3D
    • Koch MA, Dobeš C, Mitchell-Olds T. Multiple hybrid formation in natural populations: concerted evolution of the Internal Transcribed Spacer of nuclear ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae). Mol Biol Evol. 2003;20:338-50.
    • (2003) Mol Biol Evol , vol.20 , pp. 338-350
    • Koch, M.A.1    Dobeš, C.2    Mitchell-Olds, T.3
  • 77
    • 0036153420 scopus 로고    scopus 로고
    • Crosses between Saccharomyces cerevisiae and Saccharomyces bayanus generate fertile hybrids
    • 1:CAS:528:DC%2BD38Xms1GhsQ%3D%3D
    • Sebastiani F, Barberio C, Casalone E, Cavalieri D, Polsinelli M. Crosses between Saccharomyces cerevisiae and Saccharomyces bayanus generate fertile hybrids. Res Microbiol. 2002;153:53-8.
    • (2002) Res Microbiol , vol.153 , pp. 53-58
    • Sebastiani, F.1    Barberio, C.2    Casalone, E.3    Cavalieri, D.4    Polsinelli, M.5
  • 78
    • 54049096710 scopus 로고    scopus 로고
    • Interspecies hybridization and recombination in Saccharomyces wine yeasts
    • 1:CAS:528:DC%2BD1cXhtlyqsr3I
    • Sipiczki M. Interspecies hybridization and recombination in Saccharomyces wine yeasts. FEMS Yeast Res. 2008;8:996-1007.
    • (2008) FEMS Yeast Res , vol.8 , pp. 996-1007
    • Sipiczki, M.1
  • 79
    • 84926688482 scopus 로고    scopus 로고
    • Identification of furfural resistant strains of Saccharomyces cerevisiae and Saccharomyces paradoxus from a collection of environmental and industrial isolates
    • Field S, Ryden P, Wilson D, James S, Roberts I, Richardson D, Waldron K, Clarke T. Identification of furfural resistant strains of Saccharomyces cerevisiae and Saccharomyces paradoxus from a collection of environmental and industrial isolates. Biotechnol Biofuels. 2015;8:33.
    • (2015) Biotechnol Biofuels , vol.8 , pp. 33
    • Field, S.1    Ryden, P.2    Wilson, D.3    James, S.4    Roberts, I.5    Richardson, D.6    Waldron, K.7    Clarke, T.8
  • 82
    • 33747373639 scopus 로고    scopus 로고
    • Use of population genetics to derive nonrecombinant Saccharomyces cerevisiae strains that grow using xylose as a sole carbon source
    • 1:CAS:528:DC%2BD28XhtVCjt7jF
    • Attfield PV, Bell PJL. Use of population genetics to derive nonrecombinant Saccharomyces cerevisiae strains that grow using xylose as a sole carbon source. FEMS Yeast Res. 2006;6:862.
    • (2006) FEMS Yeast Res , vol.6 , pp. 862
    • Attfield, P.V.1    Bell, P.J.L.2
  • 83
    • 77953211186 scopus 로고    scopus 로고
    • Bulk segregant analysis by high-throughput sequencing reveals a novel xylose utilization gene from Saccharomyces cerevisiae
    • Wenger JW, Schwartz K, Sherlock G. Bulk segregant analysis by high-throughput sequencing reveals a novel xylose utilization gene from Saccharomyces cerevisiae. PLoS Genet. 2010;6:e1000942.
    • (2010) PLoS Genet , vol.6
    • Wenger, J.W.1    Schwartz, K.2    Sherlock, G.3
  • 84
    • 79952178786 scopus 로고    scopus 로고
    • Fungal biodegradation and enzymatic modification of lignin
    • 1:CAS:528:DC%2BC3MXitlOrurs%3D
    • Dashtban M, Schraft H, Syed TA, Qin W. Fungal biodegradation and enzymatic modification of lignin. Int J Biochem Mol Biol. 2010;1:36-50.
    • (2010) Int J Biochem Mol Biol , vol.1 , pp. 36-50
    • Dashtban, M.1    Schraft, H.2    Syed, T.A.3    Qin, W.4
  • 85
    • 79955958360 scopus 로고    scopus 로고
    • Sugar beet waste and its component ferulic acid inhibits external mycelium of arbuscular mycorrhizal fungus
    • 1:CAS:528:DC%2BC3MXmtFCrs78%3D
    • Medina A, Jakobsen I, Egsgaard H. Sugar beet waste and its component ferulic acid inhibits external mycelium of arbuscular mycorrhizal fungus. Soil Biol Biochem. 2011;43:1456-63.
    • (2011) Soil Biol Biochem , vol.43 , pp. 1456-1463
    • Medina, A.1    Jakobsen, I.2    Egsgaard, H.3
  • 88
    • 84908635451 scopus 로고    scopus 로고
    • High-efficiency genome editing and allele replacement in prototrophic and wild strains of Saccharomyces
    • 1:CAS:528:DC%2BC2MXhtlegsbo%3D
    • Alexander WG, Doering DT, Hittinger CT. High-efficiency genome editing and allele replacement in prototrophic and wild strains of Saccharomyces. Genetics. 2014;198:859-66.
    • (2014) Genetics , vol.198 , pp. 859-866
    • Alexander, W.G.1    Doering, D.T.2    Hittinger, C.T.3
  • 89
    • 0027182485 scopus 로고
    • A simple method of preparing plant samples for PCR
    • 1:CAS:528:DyaK3sXlvFKku7o%3D
    • Wang H, Qi M, Cutler AJ. A simple method of preparing plant samples for PCR. Nucleic Acids Res. 1993;21:4153-4.
    • (1993) Nucleic Acids Res , vol.21 , pp. 4153-4154
    • Wang, H.1    Qi, M.2    Cutler, A.J.3
  • 90
    • 0033950267 scopus 로고    scopus 로고
    • Phylogeny of the genus Kluyveromyces inferred from the mitochondrial cytochrome-c oxidase II gene
    • 1:CAS:528:DC%2BD3cXhtVequr0%3D
    • Belloch C, Querol A, Garcia MD, Barrio E. Phylogeny of the genus Kluyveromyces inferred from the mitochondrial cytochrome-c oxidase II gene. Int J Syst Evol Microbiol. 2000;50:405-16.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 405-416
    • Belloch, C.1    Querol, A.2    Garcia, M.D.3    Barrio, E.4
  • 95
    • 84905049901 scopus 로고    scopus 로고
    • Trimmomatic: A flexible trimmer for Illumina sequence data
    • 1:CAS:528:DC%2BC2cXht1Sqt7nP
    • Bolger AM, Lohse M, Usadel B. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 2014;30:2114-20.
    • (2014) Bioinformatics , vol.30 , pp. 2114-2120
    • Bolger, A.M.1    Lohse, M.2    Usadel, B.3
  • 97
    • 84996590420 scopus 로고    scopus 로고
    • In silico Whole Genome Sequencer & Analyzer (iWGS): A computational pipeline to guide the design and analysis of de novo genome sequencing studies
    • Zhou X, Peris D, Kominek J, Kurtzman CP, Hittinger CT, Rokas A. In silico Whole Genome Sequencer & Analyzer (iWGS): a computational pipeline to guide the design and analysis of de novo genome sequencing studies. G3. 2016;6:3655-70.
    • (2016) G3 , vol.6 , pp. 3655-3670
    • Zhou, X.1    Peris, D.2    Kominek, J.3    Kurtzman, C.P.4    Hittinger, C.T.5    Rokas, A.6
  • 100
    • 85012237690 scopus 로고    scopus 로고
    • Mitochondrial introgression suggests extensive ancestral hybridization events among Saccharomyces species
    • Peris D, Arias A, Orlic S, Belloch C, Perez-Traves L, Querol A, Barrio E. Mitochondrial introgression suggests extensive ancestral hybridization events among Saccharomyces species. Mol Phylogenet Evol. 2017;101:49-60.
    • (2017) Mol Phylogenet Evol , vol.101 , pp. 49-60
    • Peris, D.1    Arias, A.2    Orlic, S.3    Belloch, C.4    Perez-Traves, L.5    Querol, A.6    Barrio, E.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.