Interspecies hybridization and recombination in Saccharomyces wine yeasts

FEMS Yeast Research

Volumn 8, Issue 7, 2008, Pages 996-1007

  Sipiczki, Matthias ^a  

^a UNIVERSITY OF DEBRECEN   (Hungary)

Author keywords

Alloploid hybrid; Recombination; Saccharomyces cerevisiae; Saccharomyces kudriavzevii; Saccharomyces uvarum; Wine

Indexed keywords

ANEUPLOIDY; CONFERENCE PAPER; DIPLOIDY; FERTILITY; GENE STRUCTURE; GENOME; GENOMIC INSTABILITY; HYBRIDIZATION; INFERTILITY; INTERSPECIES HYBRIDIZATION; NONHUMAN; PHYLOGENY; SACCHAROMYCES; SACCHAROMYCES BAYANUS; SACCHAROMYCES UVARUM; WINE;

DNA, FUNGAL; HYBRIDIZATION, GENETIC; INDUSTRIAL MICROBIOLOGY; RECOMBINATION, GENETIC; SACCHAROMYCES; SACCHAROMYCES CEREVISIAE; SPECIES SPECIFICITY; WINE;

SACCHAROMYCES; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES KUDRIAVZEVII; SACCHAROMYCES UVARUM; VITACEAE;

EID: 54049096710     PISSN: 15671356     EISSN: 15671364     Source Type: Journal    
DOI: 10.1111/j.1567-1364.2008.00369.x     Document Type: Conference Paper

References (73)

1. Antunovics Z, Csoma H Sipiczki M (2003) Molecular and genetic analysis of the yeast flora of botrytized Tokaj wines. Bull de l'OIV 76 : 380 397.
2. Antunovics Z, Irinyi L Sipiczki M (2005a) Combined application of methods to taxonomic identification of Saccharomyces strains in fermenting botrytized grape must. J Appl Microbiol 98 : 971 979.
3. Antunovics Z, Nguyen H-V, Gaillardin C Sipiczki M (2005b) Gradual genome stabilisation by progressive reduction of the Saccharomyces uvarum genome in an interspecific hybrid with Saccharomyces cerevisiae. FEMS Yeast Res 5 : 1141 1151.
4. Azumi M Goto-Yamamoto N (2001) AFLP analysis of type strains and laboratory and industrial strains of Saccharomyces sensu stricto and its application to phenetic clustering. Yeast 18 : 1145 1154.
5. Banno I Kaneko Y (1989) A genetic analysis of taxonomic relation between Saccharomyces cerevisiae and Saccharomyces bayanus. Yeast 5 : S373 S377.
6. Bond U, Neal C, Donnelly D James TC (2004) Aneuploidy and copy number breakpoints in the genome of lager yeasts mapped by microarray hybridisation. Curr Genet 45 : 360 370.
7. Bradbury JE, Richards KD, Niederer HA, Lee SA, Dunbar PR Gardner RC (2006) A homozygous diploid subset of commercial wine yeast strains. Antonie van Leeuwenhoek 89 : 27 37.
8. Caridi A, Cufari A Ramondino D (2002) Winemaking from Gaglioppo grapes with hybrid strains of Saccharomyces. Folia Microbiol 47 : 407 408.
9. Ciolfi G (1994) Selezione di uno stipite di lievito Saccharomyces della razza fisiologica uvarum e suo impiego enologico allo stato secco. L'Enotecnico 71 76.
10. Coloretti F, Zambonelli C Tini V (2006) Characterization of flocculent Saccharomyces interspecific hybrids for the production of sparkling wines. Food Microbiol 23 : 672 676.
11. Cummings J Fogel S (1978) Genetic homology of wine yeasts with Saccharomyces cerevisiae. I Inst Brew 84 : 267 270.
12. de Barros Lopes M, Bellon JR, Shirly NJ Ganter PF (2002) Evidence for multiple interspecific hybridization in Saccharomyces sensu stricto species. FEMS Yeast Res 1 : 323 331.
13. Dellaglio F, Zapparoli G, Malacrino P, Suzzi G Torriani S (2003) Saccharomyces bayanus var. uvarum and Saccharomyces cerevisiae succession during spontaneous fermentations of Recioto and Amarone wines. Ann Microbiol 53 : 411 425.
14. Delneri D, Colson I, Grammenoudi S, Roberts IN, Louis EJ Oliver SG (2003) Engineering evolution to study speciation in yeasts. Nature 422 : 68 72.
15. Demuyter C, Lollier M, Legras J-L Le Juene C (2004) Predominance of Saccharomyces uvarum during spontaneous alcoholic fermentation, for three consecutive years, in an Alsatian winery. J Appl Microbiol 97 : 1140 1148.
16. Eickbush TH Eickbush DG (2007) Finely orchestrated movement: evolution of the ribosomal RNA genes. Genetics 175 : 477 485.
17. Fay JC Benavides JA (2005) Evidence for domesticated and wild populations of Saccharomyces cerevisiae. PLoS Genetics 1 : e5.
18. Fernandez-Espinar MT, Barrio E Querol A (2003) Analysis of the genetic variability in the species of the Saccharomyces sensu stricto complex. Yeast 20 : 1213 1226.
19. Fleet GH Heard GM (1993) Yeast-growth during fermentation. Wine Microbiology and Biotechnology (Fleet GH Heard GM, eds), pp. 27 55. Harwood Academic Publishers, Chur, Switzerland.
20. Gainvors A, Frezier V, Lemaresquier H, Lequart C, Aigle M Belarbi A (1994) Detection of polygalacturonase, pectin-lyase and pectin-esterase activities in a Saccharomyces cerevisiae strain. Yeast 10 : 1311 1319.
21. Giudici P, Caggia C, Pulvirenti A, Zambonelli C Rainieri S (1998) Electrophoretic profile of hybrids between cryotolerant and non-cryotolerant Saccharomyces strains. Lett Appl Microbiol 27 : 31 34.
22. Gonzalez SS, Bario E, Gafner J Querol A (2006) Natural hybrids from Saccharomyces cerevisiae, Saccharomyces bayanus and Saccharomyces kudriavzevii in wine fermentations. FEMS Yeast Res 6 : 1221 1234.
23. Greig D, Borts RH, Louis EJ Travisano M (2002) Epistasis and hybrid sterility in Saccharomyces. Proc R Soc Lond B 269 : 1167 1171.
24. Groth G, Hansen J Piskur J (1999) A natural chimeric yeast containing genetic material from three species. Int J Syst Bacteriol 49 : 1933 1938.
25. Gunge N Nakatoni Y (1972) Genetic mechanisms of rare matings of the yeast Saccharomyces cerevisiae heterozygous for mating type. Genetics 70 : 41 58.
26. Guthrie C Fink GR (1991) Guide to Yeast Genetics and Molecular Biology. Academic Press, San Diego.
27. Hawthorne D Philippsen P (1994) Genetic and molecular analysis of hybrids in the genus Saccharomyces involving S. cerevisiae, S. uvarum and a new species, S. douglasii. Yeast 10 : 1285 1296.
28. Heinrich AJ (2006) Identification of genomic differences between laboratory and commercial strains of Saccharomyces cerevisiae. PhD Thesis, The University of Adelaide, Adelaide.
29. Henschke PA, Kwiatkowski MJ, Fogarty MW, McWilliam SJ, Hoj PB, Eglinton JM Francis L (2000) The effect of Saccharomyces bayanus-mediated fermentation on the chemical composition and aroma profile of Chardonnay wine. Aust J Grape Wine Res 6 : 190 196.
30. Herskowitz I, Rine J Strathern JN (1992) Mating-type determination and mating-type interconversion in Saccharomyces cerevisiae. The Molecular and Cellular Biology of the yeast Saccharomyces (Jones EW, Pringle JR Broach JR, eds), pp. 584 656. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
31. Johnston JR, Baccari C Mortimer RK (2000) Genotypic characterization of strains of commercial wine yeasts by tetrad analysis. Res Microbiol 151 : 583 590.
32. Jolly NP, Janse BJH, van Rooyen TJ Louw JK (1993) Hybridization and typing of yeasts used in sparkling wine fermentations. Am J Enol Vit 44 : 217 226.
33. Kishimoto M (1994) Fermentation characteristics of hybrids between the cryophilic wine yeast Saccharomyces bayanus and the mesophilic wine yeast Saccharomyces cerevisiae. J Ferment Bioeng 77 : 432 435.
34. Kurtzman CP (2003) Phylogenetic circumscription of Saccharomyces, Kluyveromyces and other members of the Saccharomycetaceae, and the proposal of the new genera Lachancea, Nakaseomyces, Naumovia, Vanderwaltozyma and Zygotorulaspora. FEMS Yeast Res 4 : 233 245.
35. Kurtzman CP Piskur J (2006) Taxonomy and phylogenetic diversity among the yeasts. Comparative Genomics Using Fungi as Models (Sunnerhagen P Piskur J, eds), pp. 29 46. Springer Verlag, Heidelberg.
36. Le Jeune C, Lollier M, Demuyter C, Erny C, Legras J-L, Aigle M Masneuf-Pomarede I (2007) Characterization of natural hybrids of Saccharomyces cerevisiae and Saccharomyces bayanus var. uvarum. FEMS Yeast Res 7 : 540 549.
37. Lopandic K, Gangl H, Wallner E, Tscheik G, Leitner G, Querol A, Borth N, Breitenbach M, Prillinger H Tiefenbrunner W (2007) Genetically different wine yeasts isolated from Austrian vine-growing regions influence wine aroma differently and contain putative hybrids between Saccharomyces cerevisiae and Saccharomyces kudriavzevii. FEMS Yeast Res 7 : 953 965.
38. Marinoni G, Manuel M, Petersen RF, Hvidtfeldt J, Sulo P Piskur J (1999) Horizontal transfer of genetic material among Saccharomyces yeasts. J Bacteriol 181 : 6488 6496.
39. Masneuf I, Aigle M Dubourdieu D (1996) Development of a polymerase chain reaction/restriction fragment length polymorphism method for Saccharomyces cerevisiae and Saccharomyces bayanus identification in enology. FEMS Microbiol Lett 138 : 239 244.
40. Masneuf I, Hansen J, Groth C, Piskur J Dubourdieu D (1998) New hybrids between Saccharomyces sensu stricto yeast species found among wine and cider production strains. Appl Environ Microbiol 64 : 3887 3892.
41. Masneuf I, Murat ML, Naumov GI, Tominaga T Dubourdieu D (2002) Hybrids Saccharomyces cerevisiae x Saccharomyces bayanus var. uvarum having a high liberating ability of some sulphur varietal aromas of Vitis vinifera Sauvignon blanc wines. J Int Sci Vigne Vin 36 : 205 212.
42. Masneuf-Pomarede I, Le Jeune C, Durrens P, Lollier M, Aigle M Dubourdieu D (2007) Molecular typing of wine strains Saccharomyces bayanus var. uvarum using microsatellite markers. System Appl Microbiol 30 : 75 82.
43. Massoutier C, Alexandre H, Feuillat M Charpentier C (1998) Isolation and characterization of cryotolerant Saccharomyces strains. Vitis 37 : 55 59.
44. Miklos I, Varga T, Nagy A Sipiczki M (1997) Genome instability and chromosomal reaarrangements in a heterothallic wine yeast. J Basic Microbiol 37 : 345 354.
45. Minarik E Laho L (1962) Die Hefen des Tokayer Weinbaugebietes. Mitt Klosterneuburg 12A : 7 10.
46. Mortimer RK, Romano P, Suzzi G Polsinelli M (1994) Genome renewal: a new phenomenon revealed from a genetic study of 43 strains of Saccharomyces cerevisiae derived from natural fermentation of grape must. Yeast 10 : 1543 1552.
47. Nakazawa N Iwano K (2004) Efficient selection of hybrids by protoplast fusion using drug resistance markers and reporter genes in Saccharomyces cerevisiae. J Biosci Bioeng 98 : 353 358.
48. Naumov GI (1987) Genetic basis for classification and identification of the ascomycetous yeasts. Studies Mycol 30 : 469 475.
49. Naumov GI (2000) Saccharomyces bayanus var. uvarum comb. nov., a new variety established by genetic analysis. Mikrobiologiya 69 : 410 414.
50. Naumov GI Nikonenko TA (1989) Occurrence and physiological characteristics of biological species Saccharomyces bayanus from hybridological analysis. Microbiology (English trans.) 74 : 526 530.
51. Naumov GI, James SA, Naumova ES, Louis EJ Roberts IN (2000a) Three new species in the Saccharomyces sensu stricto complex: Saccharomyces cariocanus, Saccharomyces kudriavzevii and Saccharomyces mikatae. Int J Syst Evol Microbiol 5 : 1931 1942.
52. Naumov GI, Naumova ES, Masneuf I, Aigle M, Kondratieva VI Dubourdieu D (2000b) Natural polyploidization of some cultured yeast Saccharomyces sensu stricto: auto- and alloploidy. System Appl Microbiol 23 : 442 449.
53. Naumova ES, Chernookova TV, Skorikova TK, Kondratieva VI, Bur'yan NI Naumov GI (1993) Selection of sparkling yeast strains on the basis of interspecific hybridization of Saccharomyces cerevisiae x S. bayanus. Russian Biotechnol 7 : 8 13.
54. Naumova ES, Naumov GI, Manneuf- Pomerede I Aigle M (2005) Molecular genetic study of introgression between Saccharomyces bayanus and S. cerevisiae. Yeast 22 : 1099 1115.
55. Nguyen HV, Lepingle A Gaillardin C (2000) Molecular typing demonstrates homogeneity of Saccharomyces uvarum strains and reveals the existence of hybrids between S. uvarum and S. cerevisiae, including the S. bayanus type strain CBS380. Syst Appl Microbiol 23 : 71 85.
56. Pulvirenti A, Nguyen HV, Caggia C, Guidici P, Rainieri S Zambonelli C (2000) Saccharomyces uvarum, a proper species within Saccharomyces sensu stricto. FEMS Microbiol Lett 192 : 191 196.
57. Rainieri S, Zambonelli C, Giudici P Castellari L (1998) Characterisation of thermotolerant Saccharomyces cerevisiae hybrids. Biotechnol Lett 20 : 543 547.
58. Rainieri S, Zambonelli C Kaneko Y (2003) Saccharomyces sensu stricto: Systematics, genetic diversity and evolution. J Biosci Bioeng 96 : 1 9.
59. Redzepovic S, Orlic S, Majdak A Pretorius IS (2002) Identification and characterisation of Saccharomyces cerevisiae and Saccharomyces paradoxus strains isolated from Croatian vineyards. Lett Appl Microbiol 35 : 305 310.
60. Rementeria A, Rodriguez JA, Cadaval A, Amenabar R, Muguruza JR, Hernando FL Sevilla MJ (2003) Yeast associated with spontaneous fermentations of white wines from "Txakoli de Bizkaia" region (Basque country, North Spain). Int J Food Microbiol 86 : 201 207.
61. Rieger R, Michaelis A Green MM (1976) Glossary of Genetics and Cytogenetics. Springer-Verlag, Berlin.
62. Sato M, Kishimoto M, Watari J Takashio M (2002) Breeding of brewer's yeast by hybridisation between a top-fermenting yeast Saccharomyces cerevisiae and a cryophilic yeast Saccharomyces bayanus. J Biosci Bioeng 93 : 509 511.
63. Sebastiani F, Barberio C, Casalone E, Cavalieri D Polsinelli M (2002) Crosses between Saccharomyces cerevisiae and Saccharomyces bayanus generate fertile hybrids. Res Microbiol 153 : 53 58.
64. Serra A, Strehaiano P Taillandier P (2005) Influence of temperature and pH on Saccharomyces bayanus var. uvarum growth: impact of a wine yeast interspecific hybridization on these parameters. Int J Food Microbiol 104 : 257 265.
65. Sipiczki M (2002) Taxonomic and physiological diversity of Saccharomyces bayanus. Biodiversity and Biotechnology of Wine Yeasts (Ciani M, ed), pp. 53 69. Research Signpost, Kerala.
66. Sipiczki M, Romano P, Lipani G, Miklos I Antunovics Z (2001) Analysis of yeasts derived from natural fermentation in a Tokaj winery. Antonie van Leeuwenhoek 79 : 97 105.
67. Sipiczki M, Romano P, Capece A Paraggio M (2004) Genetic segregation of natural Saccharomyces cerevisiae strains derived from spontaneous fermentation of Aglianico wine. J Appl Microbiol 96 : 1169 1175.
68. Thornton RJ (1986) Genetic characterisation of New Zealand and Australian wine yeasts. Occurrence of killer systems and homothallism. Antonie van Leeuwenhoek 52 : 97 103.
69. Torriani S, Zapparoli G Suzzi G (1999) Genetic and phenotypic diversity of Saccharomyces sensu stricto strains isolated from Amarone wine. Antonie van Leeuwenhoek 75 : 207 215.
70. Torriani S., Zapparoli G, Malacrino P, Suzzi G Dellaglio F (2004) Rapid identification and differentiation of Saccharomyces cerevisiae, Saccharomyces bayanus and their hybrids by multiplex PCR. Lett Appl Microbiol 38 : 239 244.
71. Walton EF Yarranton GT (1989) Negative regulation of gene expression by mating type. Molecular and Cell Biology of Yeasts (Walton EF Yarranton GT, eds), pp. 43 69. Blackie, Glasgow.
72. Zambonelli C, Passarelli P, Rainieri A Giudici P (1993) Taxonomic and technological implications of sterility in hybrids from cryotolerant and non-cryotolerant Saccharomyces strains. Ann Microbiol 43 : 217 223.
73. Zambonelli C, Passarelli P, Rainieri S, Bertolini L, Giudici P Castellari L (1997) Technological properties and temperature response of interspecific Saccharomyces hybrids. J Sci Food Agric 74 : 7 12.