Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

Bioinformatics

Volumn 28, Issue 12, 2012, Pages 1647-1649

  Kearse, Matthew ^a   Moir, Richard ^a   Wilson, Amy ^a   Stones Havas, Steven ^a   Cheung, Matthew ^a   Sturrock, Shane ^a   Buxton, Simon ^a   Cooper, Alex ^a   Markowitz, Sidney ^a   Duran, Chris ^a,b   Thierer, Tobias ^a,d   Ashton, Bruce ^a   Meintjes, Peter ^a   Drummond, Alexei ^c  

^a Biomatters Ltd ^*  (New Zealand)

^b UNIVERSITY OF QUEENSLAND   (Australia)

^c UNIVERSITY OF AUCKLAND   (New Zealand)

^d Google Inc   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; BIOLOGY; COMPUTER INTERFACE; COMPUTER LANGUAGE; COMPUTER PROGRAM; DNA SEQUENCE; METHODOLOGY; NUCLEOTIDE SEQUENCE;

ALGORITHMS; BASE SEQUENCE; COMPUTATIONAL BIOLOGY; PROGRAMMING LANGUAGES; SEQUENCE ANALYSIS, DNA; SOFTWARE; USER-COMPUTER INTERFACE;

EID: 84863507534     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts199     Document Type: Article

References (10)

1. Altschul, S.F. et al. (1990) Basic local alignment search tool. J. Mol. Biol., 215, 403-410.
2. Drummond, A.J. et al. (2010) Geneious v5.5. Available at http://www.geneious.com, (last accessed 12 March 2012).
3. Field, D., et al. (2006) Open software for biologists: from famine to feast. Nat. Biotechnol., 24, 801-803.
4. Goecks, J. et al. (2010) Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol., 11, R86.
5. Lu, G. and Moriyama, E.N. (2004) Vector NTI, a balanced all-in-one sequence analysis suite. Brief. Bioinform., 5, 378-388.
6. Masters, B.C. et al. (2011) Species Delimitation - a Geneious plugin for the exploration of species boundaries. Mol. Ecol. Resour., 11, 154-157.
7. Mayer, C. (2006-2010) Phobos 3.3.11.Available at http://www.rub.de/spezzoo/cm/cm_phobos.htm, (last accessed 12 March 2012).
8. Schatz, M.C. et al. (2010) Cloud computing and the DNA data race. Nat. Biotechnol., 28, 691-693.
9. Smoot, M.E. et al. (2010) Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics, 27, 431-432.
10. Tamura, K. et al. (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol., 24, 1596-1599.