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Volumn 32, Issue 11, 2015, Pages 2818-2831

The genome sequence of saccharomyces eubayanus and the domestication of lager-brewing yeasts

Author keywords

domestication; genome assembly; hybridization; lager brewing; Saccharomyces eubayanus

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; COMPARATIVE STUDY; DNA HYBRIDIZATION; DOMESTICATION; FUNGAL GENOME; GENE ORDER; GENE SEQUENCE; GENETIC ASSOCIATION; GENETIC VARIABILITY; LAGER BREWING YEAST; MITOCHONDRIAL GENOME; NONHUMAN; PHYLOGENY; PURIFYING SELECTION; SACCHAROMYCES; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES EUBAYANUS; YEAST; BEER; CHROMOSOMAL MAPPING; GENETICS; GENOMICS; HYBRIDIZATION; MICROBIOLOGY; MOLECULAR EVOLUTION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE;

EID: 84946036222     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msv168     Document Type: Article
Times cited : (153)

References (88)
  • 5
    • 84901060647 scopus 로고    scopus 로고
    • Evidence for a Far East Asian origin of lager beer yeast
    • Bing J, Han PJ, Liu WQ, Wang QM, Bai FY. 2014. Evidence for a Far East Asian origin of lager beer yeast. Curr Biol. 24:R380-R381.
    • (2014) Curr Biol. , vol.24 , pp. R380-R381
    • Bing, J.1    Han, P.J.2    Liu, W.Q.3    Wang, Q.M.4    Bai, F.Y.5
  • 7
    • 3042732668 scopus 로고    scopus 로고
    • Aneuploidy and copy number breakpoints in the genome of lager yeasts mapped by microarray hybridisation
    • Bond U, Neal C, Donnelly D, James TC. 2004. Aneuploidy and copy number breakpoints in the genome of lager yeasts mapped by microarray hybridisation. Curr Genet. 45:360-370.
    • (2004) Curr Genet. , vol.45 , pp. 360-370
    • Bond, U.1    Neal, C.2    Donnelly, D.3    James, T.C.4
  • 9
    • 84855547158 scopus 로고    scopus 로고
    • The genome sequence of the wine yeast VIN7 reveals an allotriploid hybrid genome with Saccharomyces cerevisiae and Saccharomyces kudriavzevii origins
    • Borneman AR, Desany BA, Riches D, Affourtit JP, Forgan AH, Pretorius IS, Egholm M, Chambers PJ. 2012. The genome sequence of the wine yeast VIN7 reveals an allotriploid hybrid genome with Saccharomyces cerevisiae and Saccharomyces kudriavzevii origins. FEMS Yeast Res. 12:88-96.
    • (2012) FEMS Yeast Res. , vol.12 , pp. 88-96
    • Borneman, A.R.1    Desany, B.A.2    Riches, D.3    Affourtit, J.P.4    Forgan, A.H.5    Pretorius, I.S.6    Egholm, M.7    Chambers, P.J.8
  • 11
    • 77953139551 scopus 로고    scopus 로고
    • Rapid expansion and functional divergence of subtelomeric gene families in yeasts
    • Brown CA, Murray AW, Verstrepen KJ. 2010. Rapid expansion and functional divergence of subtelomeric gene families in yeasts. Curr Biol. 20:895-903.
    • (2010) Curr Biol. , vol.20 , pp. 895-903
    • Brown, C.A.1    Murray, A.W.2    Verstrepen, K.J.3
  • 12
    • 0034915593 scopus 로고    scopus 로고
    • Analysis of the constitution of the beer yeast genome by PCR, sequencing and subtelomeric sequence hybridization
    • Casaregola S, Nguyen HV, Lapathitis G, Kotyk A, Gaillardin C. 2001. Analysis of the constitution of the beer yeast genome by PCR, sequencing and subtelomeric sequence hybridization. Int J Syst Evol Microbiol. 51:1607-1618.
    • (2001) Int J Syst Evol Microbiol. , vol.51 , pp. 1607-1618
    • Casaregola, S.1    Nguyen, H.V.2    Lapathitis, G.3    Kotyk, A.4    Gaillardin, C.5
  • 14
    • 84873247966 scopus 로고    scopus 로고
    • The Not3/5 subunit of the Ccr4-Not complex: A central regulator of gene expression that integrates signals between the cytoplasm and the nucleus in eukaryotic cells
    • Collart MA, Panasenko OO, Nikolaev SI. 2013. The Not3/5 subunit of the Ccr4-Not complex: a central regulator of gene expression that integrates signals between the cytoplasm and the nucleus in eukaryotic cells. Cell Signal. 25:743-751.
    • (2013) Cell Signal. , vol.25 , pp. 743-751
    • Collart, M.A.1    Panasenko, O.O.2    Nikolaev, S.I.3
  • 15
    • 84871396035 scopus 로고    scopus 로고
    • Characterization of maltotriose transporters from the Saccharomyces eubayanus subgenome of the hybrid Saccharomyces pastorianus lager brewing yeast strain Weihenstephan 34/70
    • Cousseau FEM, Alves SL, Trichez D, Stambuk BU. 2013. Characterization of maltotriose transporters from the Saccharomyces eubayanus subgenome of the hybrid Saccharomyces pastorianus lager brewing yeast strain Weihenstephan 34/70. Lett Appl. Microbiol. 56:21-29.
    • (2013) Lett Appl. Microbiol. , vol.56 , pp. 21-29
    • Cousseau, F.E.M.1    Alves, S.L.2    Trichez, D.3    Stambuk, B.U.4
  • 16
    • 54149110152 scopus 로고    scopus 로고
    • The legacy of domestication: Accumulation of deleterious mutations in the dog genome
    • Cruz F, Vila C, Webster MT. 2008. The legacy of domestication: accumulation of deleterious mutations in the dog genome.Mol Biol Evol. 25:2331-2336.
    • (2008) Mol Biol Evol. , vol.25 , pp. 2331-2336
    • Cruz, F.1    Vila, C.2    Webster, M.T.3
  • 17
    • 0037105431 scopus 로고    scopus 로고
    • Characterization of the putative maltose transporters encoded by YDL247w and YJR160c
    • Day RE, Higgins VJ, Rogers PJ, Dawes IW. 2002. Characterization of the putative maltose transporters encoded by YDL247w and YJR160c. Yeast 19:1015-1027.
    • (2002) Yeast , vol.19 , pp. 1015-1027
    • Day, R.E.1    Higgins, V.J.2    Rogers, P.J.3    Dawes, I.W.4
  • 18
    • 23944469389 scopus 로고    scopus 로고
    • Maltotriose utilization in lager yeast strains: MTT1 encodes a maltotriose transporter
    • Dietvorst J, Londesborough J, Steensma HY. 2005. Maltotriose utilization in lager yeast strains: MTT1 encodes a maltotriose transporter. Yeast 22:775-788.
    • (2005) Yeast , vol.22 , pp. 775-788
    • Dietvorst, J.1    Londesborough, J.2    Steensma, H.Y.3
  • 19
    • 33845618112 scopus 로고    scopus 로고
    • The molecular genetics of crop domestication
    • Doebley JF, Gaut BS, Smith BD. 2006. The molecular genetics of crop domestication. Cell 127:1309-1321.
    • (2006) Cell , vol.127 , pp. 1309-1321
    • Doebley, J.F.1    Gaut, B.S.2    Smith, B.D.3
  • 22
    • 84860591356 scopus 로고    scopus 로고
    • Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments
    • Dunn B, Richter C, Kvitek DJ, Pugh T, Sherlock G. 2012. Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments. Genome Res. 22:908-924.
    • (2012) Genome Res. , vol.22 , pp. 908-924
    • Dunn, B.1    Richter, C.2    Kvitek, D.J.3    Pugh, T.4    Sherlock, G.5
  • 23
    • 53549098548 scopus 로고    scopus 로고
    • Reconstruction of the genome origins and evolution of the hybrid lager yeast Saccharomyces pastorianus
    • Dunn B, Sherlock G. 2008. Reconstruction of the genome origins and evolution of the hybrid lager yeast Saccharomyces pastorianus. Genome Res. 18:1610-1623.
    • (2008) Genome Res. , vol.18 , pp. 1610-1623
    • Dunn, B.1    Sherlock, G.2
  • 24
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 25
    • 84888274008 scopus 로고    scopus 로고
    • Genome sequencing and population genomics in nonmodel organisms
    • Ellegren H. 2014. Genome sequencing and population genomics in nonmodel organisms. Trends Ecol Evol. 29:51-63.
    • (2014) Trends Ecol Evol. , vol.29 , pp. 51-63
    • Ellegren, H.1
  • 27
    • 0016110957 scopus 로고
    • The evolutionary advantage of recombination
    • Felsenstein J. 1974. The evolutionary advantage of recombination. Genetics 78:737-756.
    • (1974) Genetics , vol.78 , pp. 737-756
    • Felsenstein, J.1
  • 29
    • 0032426882 scopus 로고    scopus 로고
    • The complete sequence of the mitochondrial genome of Saccharomyces cerevisiae
    • Foury F, Roganti T, Lecrenier N, Purnelle B. 1998. The complete sequence of the mitochondrial genome of Saccharomyces cerevisiae. FEBS Lett. 440:325-331.
    • (1998) FEBS Lett. , vol.440 , pp. 325-331
    • Foury, F.1    Roganti, T.2    Lecrenier, N.3    Purnelle, B.4
  • 30
    • 0029982653 scopus 로고    scopus 로고
    • The REG2 gene of Saccharomyces cerevisiae encodes a type 1 protein phosphatase-binding protein that functions with Reg1p and the Snf1 protein kinase to regulate growth
    • Frederick DL, Tatchell K. 1996. The REG2 gene of Saccharomyces cerevisiae encodes a type 1 protein phosphatase-binding protein that functions with Reg1p and the Snf1 protein kinase to regulate growth. Mol Cell Biol. 16:2922-2931.
    • (1996) Mol Cell Biol. , vol.16 , pp. 2922-2931
    • Frederick, D.L.1    Tatchell, K.2
  • 32
    • 84922655919 scopus 로고    scopus 로고
    • Saccharomyces pastorianus: Genomic insights inspiring innovation for industry
    • Gibson B, Liti G. 2015. Saccharomyces pastorianus: genomic insights inspiring innovation for industry. Yeast 32:17-27.
    • (2015) Yeast , vol.32 , pp. 17-27
    • Gibson, B.1    Liti, G.2
  • 33
    • 84880178341 scopus 로고    scopus 로고
    • Comparative physiology and fermentation performance of Saaz and Frohberg lager yeast strains and the parental species Saccharomyces eubayanus
    • Gibson BR, Storgards E, Krogerus K, Vidgren V. 2013. Comparative physiology and fermentation performance of Saaz and Frohberg lager yeast strains and the parental species Saccharomyces eubayanus. Yeast 30:255-266.
    • (2013) Yeast , vol.30 , pp. 255-266
    • Gibson, B.R.1    Storgards, E.2    Krogerus, K.3    Vidgren, V.4
  • 36
    • 84898605087 scopus 로고    scopus 로고
    • Sequencing and characterisation of rearrangements in three S. Pastorianus strains reveals the presence of chimeric genes and gives evidence of breakpoint reuse
    • Hewitt SK, Donaldson IJ, Lovell SC, Delneri D. 2014. Sequencing and characterisation of rearrangements in three S. pastorianus strains reveals the presence of chimeric genes and gives evidence of breakpoint reuse. PLoS One 9:e92203.
    • (2014) PLoS One , vol.9 , pp. e92203
    • Hewitt, S.K.1    Donaldson, I.J.2    Lovell, S.C.3    Delneri, D.4
  • 37
    • 0013979181 scopus 로고
    • The effect of linkage on limits to artificial selection
    • Hill WG, Robertson A. 1966. The effect of linkage on limits to artificial selection. Genet Res. 8:269-294.
    • (1966) Genet Res. , vol.8 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 39
    • 4644304792 scopus 로고    scopus 로고
    • Parallel inactivation of multiple GAL pathway genes and ecological diversification in yeasts
    • Hittinger CT, Rokas A, Carroll SB. 2004. Parallel inactivation of multiple GAL pathway genes and ecological diversification in yeasts. Proc Natl Acad Sci U S A. 101:14144-14149.
    • (2004) Proc Natl Acad Sci U S A. , vol.101 , pp. 14144-14149
    • Hittinger, C.T.1    Rokas, A.2    Carroll, S.B.3
  • 40
    • 39649104571 scopus 로고    scopus 로고
    • Lager yeasts possess dynamic genomes that undergo rearrangements and gene amplification in response to stress
    • James TC, Usher J, Campbell S, Bond U. 2008. Lager yeasts possess dynamic genomes that undergo rearrangements and gene amplification in response to stress. Curr Genet. 53:139-152.
    • (2008) Curr Genet. , vol.53 , pp. 139-152
    • James, T.C.1    Usher, J.2    Campbell, S.3    Bond, U.4
  • 41
    • 0033794796 scopus 로고    scopus 로고
    • Protein phosphatase type-1 regulatory subunits Reg1p and Reg2p act as signal transducers in the glucose-induced inactivation of maltose permease in Saccharomyces cerevisiae
    • Jiang H, Tatchell K, Liu S, Michels CA. 2000. Protein phosphatase type-1 regulatory subunits Reg1p and Reg2p act as signal transducers in the glucose-induced inactivation of maltose permease in Saccharomyces cerevisiae. Mol Gen Genet. 263:411-422.
    • (2000) Mol Gen Genet. , vol.263 , pp. 411-422
    • Jiang, H.1    Tatchell, K.2    Liu, S.3    Michels, C.A.4
  • 42
    • 56749107039 scopus 로고    scopus 로고
    • Molecular characterization of clonal interference during adaptive evolution in asexual populations of Saccharomyces cerevisiae
    • Kao KC, Sherlock G. 2008. Molecular characterization of clonal interference during adaptive evolution in asexual populations of Saccharomyces cerevisiae. Nat Genet. 40:1499-1504.
    • (2008) Nat Genet. , vol.40 , pp. 1499-1504
    • Kao, K.C.1    Sherlock, G.2
  • 44
    • 65249100208 scopus 로고    scopus 로고
    • The cost of gene expression underlies a fitness trade-off in yeast
    • Lang GI, Murray AW, Botstein D. 2009. The cost of gene expression underlies a fitness trade-off in yeast. Proc Natl Acad Sci U S A. 106:5755-5760.
    • (2009) Proc Natl Acad Sci U S A. , vol.106 , pp. 5755-5760
    • Lang, G.I.1    Murray, A.W.2    Botstein, D.3
  • 50
    • 14544290992 scopus 로고    scopus 로고
    • Inferences of evolutionary relationships from a population survey of LTR-retrotransposons and telomeric-Associated sequences in the Saccharomyces sensu stricto complex
    • Liti G, Peruffo A, James SA, Roberts IN, Louis EJ. 2005. Inferences of evolutionary relationships from a population survey of LTR-retrotransposons and telomeric-Associated sequences in the Saccharomyces sensu stricto complex. Yeast 22:177-192.
    • (2005) Yeast , vol.22 , pp. 177-192
    • Liti, G.1    Peruffo, A.2    James, S.A.3    Roberts, I.N.4    Louis, E.J.5
  • 51
    • 84934435372 scopus 로고    scopus 로고
    • Phylogeny-Aware alignment with PRANK
    • Leoytynoja A. 2014. Phylogeny-Aware alignment with PRANK. Methods Mol Biol. 1079:155-170.
    • (2014) Methods Mol Biol. , vol.1079 , pp. 155-170
    • Leoytynoja, A.1
  • 52
    • 33344458581 scopus 로고    scopus 로고
    • The accumulation of deleterious mutations in rice genomes: A hypothesis on the cost of domestication
    • Lu J, Tang T, Tang H, Huang J, Shi S, Wu CI. 2006. The accumulation of deleterious mutations in rice genomes: a hypothesis on the cost of domestication. Trends Genet. 22:126-131.
    • (2006) Trends Genet. , vol.22 , pp. 126-131
    • Lu, J.1    Tang, T.2    Tang, H.3    Huang, J.4    Shi, S.5    Wu, C.I.6
  • 53
    • 80255127234 scopus 로고    scopus 로고
    • Cutadapt removes adapter sequences from highthroughput sequencing reads
    • Martin M. 2011. Cutadapt removes adapter sequences from highthroughput sequencing reads. EMBnet J. 17:10-12.
    • (2011) EMBnet J. , vol.17 , pp. 10-12
    • Martin, M.1
  • 54
    • 0022402758 scopus 로고
    • Deoxyribonucleic acid relatedness among species of the genus Saccharomyces Sensu Stricto
    • Martini AV, Kurtzman CP. 1985. Deoxyribonucleic acid relatedness among species of the genus Saccharomyces Sensu Stricto. Int J Syst Bacteriol. 35:508-511.
    • (1985) Int J Syst Bacteriol. , vol.35 , pp. 508-511
    • Martini, A.V.1    Kurtzman, C.P.2
  • 55
    • 0011852212 scopus 로고
    • Three newly delimited species of Saccharomyces sensu stricto
    • Martini AV, Martini A. 1987. Three newly delimited species of Saccharomyces sensu stricto. Antonie Van Leeuwenhoek 53:77-84.
    • (1987) Antonie van Leeuwenhoek , vol.53 , pp. 77-84
    • Martini, A.V.1    Martini, A.2
  • 56
    • 79955640720 scopus 로고    scopus 로고
    • Esslinger HM, editor. Handbook of brewing processes, technology, markets. Weinheim (Germany Wiley-VCH.
    • Meussdoerffer FG. 2009. A comprehensive history of beer brewing. In: Esslinger HM, editor. Handbook of brewing processes, technology, markets. Weinheim (Germany): Wiley-VCH. p. 1-42.
    • (2009) A Comprehensive History of Beer Brewing , pp. 1-42
    • Meussdoerffer, F.G.1
  • 57
    • 85005773708 scopus 로고    scopus 로고
    • Loss of lager specific genes and subtelomeric regions define two different Saccharomyces cerevisiae lineages for Saccharomyces pastorianus Group i and II strains
    • fou008
    • Monerawela C, James TC, Wolfe KH, Bond U. 2015. Loss of lager specific genes and subtelomeric regions define two different Saccharomyces cerevisiae lineages for Saccharomyces pastorianus Group I and II strains. FEMS Yeast Res. 15:fou008.
    • (2015) FEMS Yeast Res. , vol.15
    • Monerawela, C.1    James, T.C.2    Wolfe, K.H.3    Bond, U.4
  • 58
    • 50549201557 scopus 로고
    • The relation of recombination to mutational advance
    • Muller HJ. 1964. The relation of recombination to mutational advance. Mutat Res. 106:2-9.
    • (1964) Mutat Res. , vol.106 , pp. 2-9
    • Muller, H.J.1
  • 60
    • 28044456330 scopus 로고    scopus 로고
    • Molecular genetic study of introgression between Saccharomyces bayanus and S cerevisiae
    • Naumova ES, Naumov GI, Masneuf-Pomarede I, AigleM, Dubourdieu D. 2005. Molecular genetic study of introgression between Saccharomyces bayanus and S. cerevisiae. Yeast 22:1099-1115.
    • (2005) Yeast , vol.22 , pp. 1099-1115
    • Naumova, E.S.1    Naumov, G.I.2    Masneuf-Pomarede, I.3    Aigle, M.4    Dubourdieu, D.5
  • 61
    • 0025764694 scopus 로고
    • Control of maltase synthesis in yeast
    • Needleman R. 1991. Control of maltase synthesis in yeast. Mol Microbiol. 5:2079-2084.
    • (1991) Mol Microbiol. , vol.5 , pp. 2079-2084
    • Needleman, R.1
  • 62
    • 13244270093 scopus 로고    scopus 로고
    • Evolutionary relationships between the former species Saccharomyces uvarum and the hybrids Saccharomyces bayanus and Saccharomyces pastorianus; Reinstatement of Saccharomyces uvarum (Beijerinck) as a distinct species
    • Nguyen HV, Gaillardin C. 2005. Evolutionary relationships between the former species Saccharomyces uvarum and the hybrids Saccharomyces bayanus and Saccharomyces pastorianus; reinstatement of Saccharomyces uvarum (Beijerinck) as a distinct species. FEMS Yeast Res. 5:471-483.
    • (2005) FEMS Yeast Res. , vol.5 , pp. 471-483
    • Nguyen, H.V.1    Gaillardin, C.2
  • 63
    • 80053610821 scopus 로고    scopus 로고
    • Deciphering the hybridisation history leading to the Lager lineage based on the mosaic genomes of Saccharomyces bayanus strains NBRC1948 and CBS380
    • Nguyen HV, Legras JL, Neuv-eglise C, Gaillardin C. 2011. Deciphering the hybridisation history leading to the Lager lineage based on the mosaic genomes of Saccharomyces bayanus strains NBRC1948 and CBS380. PLoS One 6:e25821.
    • (2011) PLoS One , vol.6 , pp. e25821
    • Nguyen, H.V.1    Legras, J.L.2    Neuv-Eglise, C.3    Gaillardin, C.4
  • 66
    • 84856599123 scopus 로고    scopus 로고
    • Themolecular characterization of new types of Saccharomyces cerevisiae-S Kudriavzevii hybrid yeasts unveils a high genetic diversity: High genetic diversity in S cerevisiae-S kudriavzevii hybrids
    • Peris D, Belloch C, Lopandic K,-Alvarez-P-erez JM, Querol A, Barrio E. 2012. Themolecular characterization of new types of Saccharomyces cerevisiae-S. kudriavzevii hybrid yeasts unveils a high genetic diversity: high genetic diversity in S. cerevisiae-S. kudriavzevii hybrids. Yeast 29:81-91.
    • (2012) Yeast , vol.29 , pp. 81-91
    • Peris, D.1    Belloch, C.2    Lopandic, K.3    Alvarez-Perez, J.M.4    Querol, A.5    Barrio, E.6
  • 67
    • 84866713711 scopus 로고    scopus 로고
    • Reconstruction of the evolutionary history of Saccharomyces cerevisiae-S. Kudriavzevii hybrids based on multilocus sequence analysis
    • Peris D, Lopes CA, Arias A, Barrio E. 2012. Reconstruction of the evolutionary history of Saccharomyces cerevisiae-S. kudriavzevii hybrids based on multilocus sequence analysis. PLoS One 7:e45527.
    • (2012) PLoS One , vol.7 , pp. e45527
    • Peris, D.1    Lopes, C.A.2    Arias, A.3    Barrio, E.4
  • 68
    • 84865049155 scopus 로고    scopus 로고
    • Comparative genomics among Saccharomyces cerevisiae-Saccharomyces kudriavzevii natural hybrid strains isolated from wine and beer reveals different origins
    • Peris D, Lopes CA, Belloch C, Querol A, Barrio E. 2012. Comparative genomics among Saccharomyces cerevisiae-Saccharomyces kudriavzevii natural hybrid strains isolated from wine and beer reveals different origins. BMC Genomics 13:407.
    • (2012) BMC Genomics , vol.13 , pp. 407
    • Peris, D.1    Lopes, C.A.2    Belloch, C.3    Querol, A.4    Barrio, E.5
  • 70
    • 84867635997 scopus 로고    scopus 로고
    • A complete sequence of Saccharomyces paradoxus mitochondrial genome that restores the respiration in S. Cerevisiae
    • Proch-Azka E, Franko F, Pol-Akov-A S, Sulo P. 2012. A complete sequence of Saccharomyces paradoxus mitochondrial genome that restores the respiration in S. cerevisiae. FEMS Yeast Res. 12:819-830.
    • (2012) FEMS Yeast Res. , vol.12 , pp. 819-830
    • Proch-Azka, E.1    Franko, F.2    Pol-Akov-A, S.3    Sulo, P.4
  • 71
    • 84866172351 scopus 로고    scopus 로고
    • A pipeline for automated annotation of yeast genome sequences by a conservedsynteny approach
    • Proux-W-era E, Armis-en D, Byrne KP, Wolfe KH. 2012. A pipeline for automated annotation of yeast genome sequences by a conservedsynteny approach. BMC Bioinformatics 13:237.
    • (2012) BMC Bioinformatics , vol.13 , pp. 237
    • Proux-W-Era, E.1    Armis-En, D.2    Byrne, K.P.3    Wolfe, K.H.4
  • 72
    • 61449235344 scopus 로고    scopus 로고
    • The complex and dynamic genomes of industrial yeasts
    • Querol A, Bond U. 2009. The complex and dynamic genomes of industrial yeasts. FEMS Microbiol Lett. 293:1-10.
    • (2009) FEMS Microbiol Lett. , vol.293 , pp. 1-10
    • Querol, A.1    Bond, U.2
  • 73
    • 33745164287 scopus 로고    scopus 로고
    • Pure and mixed genetic lines of Saccharomyces bayanus and Saccharomyces pastorianus and their contribution to the lager brewing strain genome
    • Rainieri S, Kodama Y, Kaneko Y, Mikata K, Nakao Y, Ashikari T. 2006. Pure and mixed genetic lines of Saccharomyces bayanus and Saccharomyces pastorianus and their contribution to the lager brewing strain genome. Appl Environ Microbiol. 72:3968-3974.
    • (2006) Appl Environ Microbiol. , vol.72 , pp. 3968-3974
    • Rainieri, S.1    Kodama, Y.2    Kaneko, Y.3    Mikata, K.4    Nakao, Y.5    Ashikari, T.6
  • 75
    • 84889480413 scopus 로고    scopus 로고
    • Esslinger HM, editor. Handbook of brewing processes, technology, markets. Weinheim (Germany Wiley-VCH.
    • Riese JC, Eblinger HM. 2009. World beer market. In: Esslinger HM, editor. Handbook of brewing processes, technology, markets. Weinheim (Germany): Wiley-VCH. p. 497-513.
    • (2009) World Beer Market , pp. 497-513
    • Riese, J.C.1    Eblinger, H.M.2
  • 76
    • 84908477365 scopus 로고    scopus 로고
    • Saccharomyces eubayanus and Saccharomyces uvarum associated with the fermentation of Araucaria araucana seeds in Patagonia
    • Rodriguez ME, Perez-Draves L, Sangorrin MP, Barrio E, Lopes CA. 2014. Saccharomyces eubayanus and Saccharomyces uvarum associated with the fermentation of Araucaria araucana seeds in Patagonia. FEMS Yeast Res. 14:948-965.
    • (2014) FEMS Yeast Res. , vol.14 , pp. 948-965
    • Rodriguez, M.E.1    Perez-Draves, L.2    Sangorrin, M.P.3    Barrio, E.4    Lopes, C.A.5
  • 77
    • 59349083327 scopus 로고    scopus 로고
    • The effect of domestication on the fungal proteome
    • Rokas A. 2009. The effect of domestication on the fungal proteome. Trends Genet. 25:60-63.
    • (2009) Trends Genet. , vol.25 , pp. 60-63
    • Rokas, A.1
  • 79
    • 84929658508 scopus 로고    scopus 로고
    • The 100-genomes strains, an S. Cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen
    • Strope PK, Skelly DA, Kozmin SG, Mahadevan G, Stone EA, Magwene PM, Dietrich FS, McCusker JH. 2015. The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen. Genome Res. 25:762-774.
    • (2015) Genome Res. , vol.25 , pp. 762-774
    • Strope, P.K.1    Skelly, D.A.2    Kozmin, S.G.3    Mahadevan, G.4    Stone, E.A.5    Magwene, P.M.6    Dietrich, F.S.7    McCusker, J.H.8
  • 80
    • 33747847779 scopus 로고    scopus 로고
    • PAL2NAL: Robust conversion of protein sequence alignments into the corresponding codon alignments
    • Suyama M, Torrents D, Bork P. 2006. PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments. Nucleic Acids Res. 34:W609-W612.
    • (2006) Nucleic Acids Res. , vol.34 , pp. W609-W612
    • Suyama, M.1    Torrents, D.2    Bork, P.3
  • 82
    • 77956247188 scopus 로고    scopus 로고
    • Characterization of a new multigene family encoding isomaltases in the yeast Saccharomyces cerevisiae, the IMA family
    • TesteMA, Francois JM, Parrou JL. 2010. Characterization of a new multigene family encoding isomaltases in the yeast Saccharomyces cerevisiae, the IMA family. J Biol Chem. 285:26815-26824.
    • (2010) J Biol Chem. , vol.285 , pp. 26815-26824
    • Teste, M.A.1    Francois, J.M.2    Parrou, J.L.3
  • 83
    • 77952205484 scopus 로고    scopus 로고
    • The temperature dependence of maltose transport in ale and lager strains of brewer?s yeast
    • Vidgren V, Multanen JP, Ruohonen L, Londesborough J. 2010. The temperature dependence of maltose transport in ale and lager strains of brewer?s yeast. FEMS Yeast Res. 10:402-411.
    • (2010) FEMS Yeast Res. , vol.10 , pp. 402-411
    • Vidgren, V.1    Multanen, J.P.2    Ruohonen, L.3    Londesborough, J.4
  • 84
    • 84901380161 scopus 로고    scopus 로고
    • Genome sequence of Saccharomyces carlsbergensis, the worlds first pure culture lager yeast
    • Walther A, Hesselbart A, Wendland J. 2014. Genome sequence of Saccharomyces carlsbergensis, the worlds first pure culture lager yeast. G3 (Bethesda) 4:783-793.
    • (2014) G3 (Bethesda , Issue.4 , pp. 783-793
    • Walther, A.1    Hesselbart, A.2    Wendland, J.3
  • 86
    • 84907454695 scopus 로고    scopus 로고
    • Lager yeast comes of age
    • Wendland J. 2014. Lager yeast comes of age. Eukaryot Cell. 13:1256-1265.
    • (2014) Eukaryot Cell. , vol.13 , pp. 1256-1265
    • Wendland, J.1
  • 87
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: Phylogenetic analysis by maximum likelihood
    • Yang Z. 2007. PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol. 24:1586-1591.
    • (2007) Mol Biol Evol. , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 88
    • 0038506725 scopus 로고    scopus 로고
    • Multiple pathways are co-regulated by the protein kinase Snf1 and the transcription factors Adr1 and Cat8
    • Young ET, Dombek KM, Tachibana C, Ideker T. 2003. Multiple pathways are co-regulated by the protein kinase Snf1 and the transcription factors Adr1 and Cat8. J Biol Chem. 278:26146-26158.
    • (2003) J Biol Chem. , vol.278 , pp. 26146-26158
    • Young, E.T.1    Dombek, K.M.2    Tachibana, C.3    Ideker, T.4


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